Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0816230 | TYG37765.1 | 75.122 | 205 | 39 | 4 | 5 | 207 | 10 | 204 | 8.15e-94 | 282 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0816230 | sp|P68428|H32_WHEAT | 100.000 | 136 | 0 | 0 | 72 | 207 | 1 | 136 | 2.00e-94 | 274 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0816230 | G7L647 | 71.739 | 230 | 41 | 6 | 2 | 207 | 6 | 235 | 3.13e-96 | 289 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006840 | Msa0816230 | 0.837247 | 5.815789e-57 | -8.615850e-47 |
| Msa0015570 | Msa0816230 | 0.800365 | 1.491206e-48 | -8.615850e-47 |
| Msa0016530 | Msa0816230 | 0.802049 | 6.745355e-49 | -8.615850e-47 |
| Msa0018920 | Msa0816230 | 0.821684 | 3.541542e-53 | -8.615850e-47 |
| Msa0020540 | Msa0816230 | 0.828335 | 9.518428e-55 | -8.615850e-47 |
| Msa0027800 | Msa0816230 | 0.826229 | 3.042601e-54 | -8.615850e-47 |
| Msa0030070 | Msa0816230 | 0.861838 | 7.744283e-64 | -8.615850e-47 |
| Msa0032980 | Msa0816230 | 0.852575 | 4.218325e-61 | -8.615850e-47 |
| Msa0044520 | Msa0816230 | 0.807804 | 4.225591e-50 | -8.615850e-47 |
| Msa0050150 | Msa0816230 | 0.824204 | 9.162055e-54 | -8.615850e-47 |
| Msa0050530 | Msa0816230 | 0.863238 | 2.870687e-64 | -8.615850e-47 |
| Msa0057640 | Msa0816230 | 0.821456 | 3.998861e-53 | -8.615850e-47 |
| Msa0062340 | Msa0816230 | 0.816196 | 6.264058e-52 | -8.615850e-47 |
| Msa0067380 | Msa0816230 | 0.800467 | 1.421719e-48 | -8.615850e-47 |
| Msa0078130 | Msa0816230 | 0.828515 | 8.613801e-55 | -8.615850e-47 |
| Msa0079410 | Msa0816230 | 0.826197 | 3.096365e-54 | -8.615850e-47 |
| Msa0080370 | Msa0816230 | 0.809293 | 2.033086e-50 | -8.615850e-47 |
| Msa0080440 | Msa0816230 | 0.806878 | 6.640176e-50 | -8.615850e-47 |
| Msa0090440 | Msa0816230 | 0.815083 | 1.108379e-51 | -8.615850e-47 |
| Msa0091350 | Msa0816230 | 0.879391 | 1.295165e-69 | -8.615850e-47 |
| Msa0093860 | Msa0816230 | 0.800040 | 1.736792e-48 | -8.615850e-47 |
| Msa0094180 | Msa0816230 | 0.817778 | 2.764058e-52 | -8.615850e-47 |
| Msa0098410 | Msa0816230 | 0.822296 | 2.556131e-53 | -8.615850e-47 |
| Msa0100600 | Msa0816230 | 0.863998 | 1.667800e-64 | -8.615850e-47 |
| Msa0100890 | Msa0816230 | 0.843056 | 1.771356e-58 | -8.615850e-47 |
| Msa0106630 | Msa0816230 | 0.837007 | 6.698824e-57 | -8.615850e-47 |
| Msa0115550 | Msa0816230 | 0.812531 | 4.045895e-51 | -8.615850e-47 |
| Msa0603410 | Msa0816230 | 0.820845 | 5.529407e-53 | -8.615850e-47 |
| Msa0607800 | Msa0816230 | 0.823907 | 1.075763e-53 | -8.615850e-47 |
| Msa0608350 | Msa0816230 | 0.829653 | 4.564699e-55 | -8.615850e-47 |
| Msa0612410 | Msa0816230 | 0.815663 | 8.237303e-52 | -8.615850e-47 |
| Msa0615630 | Msa0816230 | 0.838907 | 2.175813e-57 | -8.615850e-47 |
| Msa0618840 | Msa0816230 | 0.819429 | 1.167185e-52 | -8.615850e-47 |
| Msa0618990 | Msa0816230 | 0.819896 | 9.128668e-53 | -8.615850e-47 |
| Msa0620500 | Msa0816230 | 0.865099 | 7.547148e-65 | -8.615850e-47 |
| Msa0622920 | Msa0816230 | 0.822977 | 1.774520e-53 | -8.615850e-47 |
| Msa0625620 | Msa0816230 | 0.826242 | 3.020065e-54 | -8.615850e-47 |
| Msa0640800 | Msa0816230 | 0.855458 | 6.225730e-62 | -8.615850e-47 |
| Msa0645340 | Msa0816230 | 0.863706 | 2.055249e-64 | -8.615850e-47 |
| Msa0647050 | Msa0816230 | 0.821766 | 3.391667e-53 | -8.615850e-47 |
| Msa0647440 | Msa0816230 | 0.868190 | 7.849353e-66 | -8.615850e-47 |
| Msa0648040 | Msa0816230 | 0.842880 | 1.973231e-58 | -8.615850e-47 |
| Msa0648760 | Msa0816230 | 0.848903 | 4.555160e-60 | -8.615850e-47 |
| Msa0654740 | Msa0816230 | 0.852171 | 5.499104e-61 | -8.615850e-47 |
| Msa0657210 | Msa0816230 | 0.805907 | 1.064323e-49 | -8.615850e-47 |
| Msa0659200 | Msa0816230 | 0.845551 | 3.785865e-59 | -8.615850e-47 |
| Msa0663290 | Msa0816230 | 0.828800 | 7.349086e-55 | -8.615850e-47 |
| Msa0664070 | Msa0816230 | 0.825708 | 4.046389e-54 | -8.615850e-47 |
| Msa0684750 | Msa0816230 | 0.814810 | 1.274217e-51 | -8.615850e-47 |
| Msa0687090 | Msa0816230 | 0.803951 | 2.727598e-49 | -8.615850e-47 |
| Msa0688380 | Msa0816230 | 0.842011 | 3.355767e-58 | -8.615850e-47 |
| Msa0688620 | Msa0816230 | 0.849311 | 3.507577e-60 | -8.615850e-47 |
| Msa0689830 | Msa0816230 | 0.827239 | 1.746339e-54 | -8.615850e-47 |
| Msa0690320 | Msa0816230 | 0.848333 | 6.553640e-60 | -8.615850e-47 |
| Msa0690570 | Msa0816230 | 0.830138 | 3.476315e-55 | -8.615850e-47 |
| Msa0690740 | Msa0816230 | 0.853720 | 1.982450e-61 | -8.615850e-47 |
| Msa0691270 | Msa0816230 | 0.836146 | 1.110031e-56 | -8.615850e-47 |
| Msa0695560 | Msa0816230 | 0.807227 | 5.601647e-50 | -8.615850e-47 |
| Msa0698730 | Msa0816230 | 0.808272 | 3.360219e-50 | -8.615850e-47 |
| Msa0701250 | Msa0816230 | 0.817596 | 3.038147e-52 | -8.615850e-47 |
| Msa0705140 | Msa0816230 | 0.816935 | 4.279575e-52 | -8.615850e-47 |
| Msa0705180 | Msa0816230 | 0.841591 | 4.330384e-58 | -8.615850e-47 |
| Msa0707260 | Msa0816230 | 0.851408 | 9.049684e-61 | -8.615850e-47 |
| Msa0708980 | Msa0816230 | 0.815067 | 1.117669e-51 | -8.615850e-47 |
| Msa0713920 | Msa0816230 | 0.808209 | 3.465401e-50 | -8.615850e-47 |
| Msa0714520 | Msa0816230 | 0.832751 | 7.903507e-56 | -8.615850e-47 |
| Msa0717830 | Msa0816230 | 0.832195 | 1.086034e-55 | -8.615850e-47 |
| Msa0717900 | Msa0816230 | 0.861210 | 1.204062e-63 | -8.615850e-47 |
| Msa0720280 | Msa0816230 | 0.893948 | 3.904963e-75 | -8.615850e-47 |
| Msa0722700 | Msa0816230 | 0.819405 | 1.181711e-52 | -8.615850e-47 |
| Msa0737130 | Msa0816230 | 0.853884 | 1.778570e-61 | -8.615850e-47 |
| Msa0737140 | Msa0816230 | 0.844942 | 5.531213e-59 | -8.615850e-47 |
| Msa0747740 | Msa0816230 | 0.808841 | 2.540234e-50 | -8.615850e-47 |
| Msa0749190 | Msa0816230 | 0.849117 | 3.971806e-60 | -8.615850e-47 |
| Msa0750520 | Msa0816230 | 0.854428 | 1.238708e-61 | -8.615850e-47 |
| Msa0751200 | Msa0816230 | 0.816012 | 6.885555e-52 | -8.615850e-47 |
| Msa0751250 | Msa0816230 | 0.837716 | 4.411071e-57 | -8.615850e-47 |
| Msa0751720 | Msa0816230 | 0.834298 | 3.249776e-56 | -8.615850e-47 |
| Msa0756180 | Msa0816230 | 0.810386 | 1.182805e-50 | -8.615850e-47 |
| Msa0758590 | Msa0816230 | 0.829225 | 5.797278e-55 | -8.615850e-47 |
| Msa0767280 | Msa0816230 | 0.803982 | 2.687392e-49 | -8.615850e-47 |
| Msa0778600 | Msa0816230 | 0.842801 | 2.070877e-58 | -8.615850e-47 |
| Msa0780820 | Msa0816230 | 0.810227 | 1.279948e-50 | -8.615850e-47 |
| Msa0780910 | Msa0816230 | 0.807026 | 6.180082e-50 | -8.615850e-47 |
| Msa0803140 | Msa0816230 | 0.888960 | 3.711996e-73 | -8.615850e-47 |
| Msa0816080 | Msa0816230 | 0.869489 | 2.979896e-66 | -8.615850e-47 |
| Msa0816220 | Msa0816230 | 0.804179 | 2.445692e-49 | -8.615850e-47 |
| Msa0816230 | Msa0822510 | 0.801086 | 1.062937e-48 | -8.615850e-47 |
| Msa0816230 | Msa0827420 | 0.838720 | 2.432061e-57 | -8.615850e-47 |
| Msa0816230 | Msa0831620 | 0.838016 | 3.692561e-57 | -8.615850e-47 |
| Msa0816230 | Msa0831820 | 0.808568 | 2.906075e-50 | -8.615850e-47 |
| Msa0816230 | Msa0837680 | 0.848772 | 4.951450e-60 | -8.615850e-47 |
| Msa0816230 | Msa0841500 | 0.863827 | 1.884631e-64 | -8.615850e-47 |
| Msa0816230 | Msa0846900 | 0.831131 | 1.985853e-55 | -8.615850e-47 |
| Msa0816230 | Msa0856610 | 0.851242 | 1.008159e-60 | -8.615850e-47 |
| Msa0816230 | Msa0861440 | 0.847453 | 1.145539e-59 | -8.615850e-47 |
| Msa0816230 | Msa0866530 | 0.833504 | 5.135735e-56 | -8.615850e-47 |
| Msa0816230 | Msa0879920 | 0.814103 | 1.826867e-51 | -8.615850e-47 |
| Msa0816230 | Msa0897790 | 0.808109 | 3.640334e-50 | -8.615850e-47 |
| Msa0816230 | Msa0900090 | 0.841455 | 4.702934e-58 | -8.615850e-47 |
| Msa0816230 | Msa0900760 | 0.810989 | 8.761147e-51 | -8.615850e-47 |
| Msa0816230 | Msa0901150 | 0.824927 | 6.191590e-54 | -8.615850e-47 |
| Msa0816230 | Msa0909760 | 0.842049 | 3.278631e-58 | -8.615850e-47 |
| Msa0816230 | Msa0926080 | 0.823037 | 1.718456e-53 | -8.615850e-47 |
| Msa0816230 | Msa0926310 | 0.875703 | 2.500747e-68 | -8.615850e-47 |
| Msa0816230 | Msa0929900 | 0.803614 | 3.204576e-49 | -8.615850e-47 |
| Msa0816230 | Msa0930040 | 0.830385 | 3.025329e-55 | -8.615850e-47 |
| Msa0816230 | Msa0963370 | 0.801730 | 7.843186e-49 | -8.615850e-47 |
| Msa0816230 | Msa0965470 | 0.819595 | 1.069561e-52 | -8.615850e-47 |
| Msa0816230 | Msa0966710 | 0.825480 | 4.581269e-54 | -8.615850e-47 |
| Msa0816230 | Msa0976380 | 0.817422 | 3.325163e-52 | -8.615850e-47 |
| Msa0816230 | Msa0999950 | 0.819244 | 1.286110e-52 | -8.615850e-47 |
| Msa0816230 | Msa1000780 | 0.871318 | 7.485616e-67 | -8.615850e-47 |
| Msa0816230 | Msa1000970 | 0.830690 | 2.547996e-55 | -8.615850e-47 |
| Msa0816230 | Msa1008260 | 0.812024 | 5.220487e-51 | -8.615850e-47 |
| Msa0816230 | Msa1008670 | 0.871415 | 6.954935e-67 | -8.615850e-47 |
| Msa0816230 | Msa1008680 | 0.854119 | 1.522083e-61 | -8.615850e-47 |
| Msa0816230 | Msa1008850 | 0.813143 | 2.971934e-51 | -8.615850e-47 |
| Msa0816230 | Msa1018960 | 0.811628 | 6.366097e-51 | -8.615850e-47 |
| Msa0816230 | Msa1033920 | 0.853207 | 2.783146e-61 | -8.615850e-47 |
| Msa0816230 | Msa1041370 | 0.805338 | 1.400550e-49 | -8.615850e-47 |
| Msa0816230 | Msa1050260 | 0.800559 | 1.361457e-48 | -8.615850e-47 |
| Msa0816230 | Msa1060900 | 0.815007 | 1.152435e-51 | -8.615850e-47 |
| Msa0816230 | Msa1071410 | 0.853847 | 1.822904e-61 | -8.615850e-47 |
| Msa0816230 | Msa1074150 | 0.812237 | 4.689494e-51 | -8.615850e-47 |
| Msa0816230 | Msa1076020 | 0.865011 | 8.044635e-65 | -8.615850e-47 |
| Msa0816230 | Msa1078860 | 0.852994 | 3.203903e-61 | -8.615850e-47 |
| Msa0816230 | Msa1078880 | 0.806503 | 7.971291e-50 | -8.615850e-47 |
| Msa0816230 | Msa1078990 | 0.854829 | 9.482496e-62 | -8.615850e-47 |
| Msa0816230 | Msa1081270 | 0.802480 | 5.498352e-49 | -8.615850e-47 |
| Msa0816230 | Msa1082380 | 0.838775 | 2.353805e-57 | -8.615850e-47 |
| Msa0816230 | Msa1085680 | 0.821704 | 3.504630e-53 | -8.615850e-47 |
| Msa0816230 | Msa1104110 | 0.800269 | 1.560357e-48 | -8.615850e-47 |
| Msa0816230 | Msa1106220 | 0.827908 | 1.206636e-54 | -8.615850e-47 |
| Msa0816230 | Msa1119380 | 0.828474 | 8.812144e-55 | -8.615850e-47 |
| Msa0816230 | Msa1127280 | 0.843013 | 1.819025e-58 | -8.615850e-47 |
| Msa0816230 | Msa1138800 | 0.807202 | 5.671288e-50 | -8.615850e-47 |
| Msa0816230 | Msa1144990 | 0.854363 | 1.294050e-61 | -8.615850e-47 |
| Msa0816230 | Msa1147560 | 0.830123 | 3.506690e-55 | -8.615850e-47 |
| Msa0816230 | Msa1148630 | 0.811724 | 6.068055e-51 | -8.615850e-47 |
| Msa0816230 | Msa1148930 | 0.800378 | 1.482372e-48 | -8.615850e-47 |
| Msa0816230 | Msa1149450 | 0.810576 | 1.076426e-50 | -8.615850e-47 |
| Msa0816230 | Msa1159590 | 0.810768 | 9.780555e-51 | -8.615850e-47 |
| Msa0816230 | Msa1160930 | 0.824927 | 6.191590e-54 | -8.615850e-47 |
| Msa0816230 | Msa1162880 | 0.851363 | 9.319164e-61 | -8.615850e-47 |
| Msa0816230 | Msa1163180 | 0.851748 | 7.250829e-61 | -8.615850e-47 |
| Msa0816230 | Msa1165480 | 0.848814 | 4.822764e-60 | -8.615850e-47 |
| Msa0816230 | Msa1166820 | 0.829711 | 4.417276e-55 | -8.615850e-47 |
| Msa0816230 | Msa1169170 | 0.844452 | 7.496603e-59 | -8.615850e-47 |
| Msa0816230 | Msa1169190 | 0.810936 | 8.994012e-51 | -8.615850e-47 |
| Msa0816230 | Msa1169690 | 0.856987 | 2.218422e-62 | -8.615850e-47 |
| Msa0816230 | Msa1190390 | 0.817624 | 2.994023e-52 | -8.615850e-47 |
| Msa0816230 | Msa1191000 | 0.806873 | 6.658307e-50 | -8.615850e-47 |
| Msa0816230 | Msa1201780 | 0.839908 | 1.195882e-57 | -8.615850e-47 |
| Msa0816230 | Msa1206040 | 0.817525 | 3.151932e-52 | -8.615850e-47 |
| Msa0816230 | Msa1212920 | 0.824995 | 5.967540e-54 | -8.615850e-47 |
| Msa0816230 | Msa1213830 | 0.828813 | 7.298530e-55 | -8.615850e-47 |
| Msa0816230 | Msa1214350 | 0.812175 | 4.839456e-51 | -8.615850e-47 |
| Msa0816230 | Msa1215980 | 0.866405 | 2.919801e-65 | -8.615850e-47 |
| Msa0816230 | Msa1219770 | 0.821837 | 3.264700e-53 | -8.615850e-47 |
| Msa0816230 | Msa1231780 | 0.806502 | 7.973241e-50 | -8.615850e-47 |
| Msa0816230 | Msa1240940 | 0.800908 | 1.155702e-48 | -8.615850e-47 |
| Msa0816230 | Msa1254420 | 0.859354 | 4.382403e-63 | -8.615850e-47 |
| Msa0816230 | Msa1254540 | 0.828117 | 1.074475e-54 | -8.615850e-47 |
| Msa0816230 | Msa1263740 | 0.813374 | 2.644344e-51 | -8.615850e-47 |
| Msa0816230 | Msa1263780 | 0.810158 | 1.324368e-50 | -8.615850e-47 |
| Msa0816230 | Msa1267930 | 0.816976 | 4.189189e-52 | -8.615850e-47 |
| Msa0816230 | Msa1277110 | 0.827711 | 1.345115e-54 | -8.615850e-47 |
| Msa0816230 | Msa1282300 | 0.827687 | 1.363356e-54 | -8.615850e-47 |
| Msa0816230 | Msa1293570 | 0.800445 | 1.436705e-48 | -8.615850e-47 |
| Msa0816230 | Msa1294280 | 0.802033 | 6.796642e-49 | -8.615850e-47 |
| Msa0816230 | Msa1294460 | 0.842532 | 2.441326e-58 | -8.615850e-47 |
| Msa0816230 | Msa1294790 | 0.887254 | 1.677682e-72 | -8.615850e-47 |
| Msa0816230 | Msa1297070 | 0.822199 | 2.691356e-53 | -8.615850e-47 |
| Msa0816230 | Msa1301820 | 0.866255 | 3.258977e-65 | -8.615850e-47 |
| Msa0816230 | Msa1301830 | 0.816428 | 5.557897e-52 | -8.615850e-47 |
| Msa0816230 | Msa1305780 | 0.807049 | 6.111104e-50 | -8.615850e-47 |
| Msa0816230 | Msa1306570 | 0.814862 | 1.240923e-51 | -8.615850e-47 |
| Msa0816230 | Msa1308860 | 0.804967 | 1.675300e-49 | -8.615850e-47 |
| Msa0816230 | Msa1315500 | 0.819958 | 8.833496e-53 | -8.615850e-47 |
| Msa0816230 | Msa1328870 | 0.813818 | 2.110740e-51 | -8.615850e-47 |
| Msa0816230 | Msa1331650 | 0.800090 | 1.696250e-48 | -8.615850e-47 |
| Msa0816230 | Msa1332950 | 0.818700 | 1.709055e-52 | -8.615850e-47 |
| Msa0816230 | Msa1339170 | 0.835168 | 1.962696e-56 | -8.615850e-47 |
| Msa0816230 | Msa1339230 | 0.928736 | 1.892622e-92 | -8.615850e-47 |
| Msa0816230 | Msa1361930 | 0.847271 | 1.285232e-59 | -8.615850e-47 |
| Msa0816230 | Msa1372030 | 0.805307 | 1.421825e-49 | -8.615850e-47 |
| Msa0816230 | Msa1375350 | 0.818285 | 2.122793e-52 | -8.615850e-47 |
| Msa0816230 | Msa1381470 | 0.830663 | 2.587366e-55 | -8.615850e-47 |
| Msa0816230 | Msa1381800 | 0.854030 | 1.614814e-61 | -8.615850e-47 |
| Msa0816230 | Msa1387500 | 0.848732 | 5.082337e-60 | -8.615850e-47 |
| Msa0816230 | Msa1389820 | 0.811733 | 6.040522e-51 | -8.615850e-47 |
| Msa0816230 | Msa1390210 | 0.842880 | 1.973887e-58 | -8.615850e-47 |
| Msa0816230 | Msa1393560 | 0.845626 | 3.611256e-59 | -8.615850e-47 |
| Msa0816230 | Msa1399190 | 0.865184 | 7.098059e-65 | -8.615850e-47 |
| Msa0816230 | Msa1406720 | 0.841872 | 3.651626e-58 | -8.615850e-47 |
| Msa0816230 | Msa1410190 | 0.862982 | 3.443831e-64 | -8.615850e-47 |
| Msa0816230 | Msa1424370 | 0.835946 | 1.248030e-56 | -8.615850e-47 |
| Msa0816230 | Msa1424590 | 0.811702 | 6.134193e-51 | -8.615850e-47 |
| Msa0816230 | Msa1426320 | 0.872115 | 4.075699e-67 | -8.615850e-47 |
| Msa0816230 | Msa1432060 | 0.837080 | 6.419823e-57 | -8.615850e-47 |
| Msa0816230 | Msa1432520 | 0.828964 | 6.708317e-55 | -8.615850e-47 |
| Msa0816230 | Msa1434640 | 0.838929 | 2.147494e-57 | -8.615850e-47 |
| Msa0816230 | Msa1435100 | 0.842096 | 3.186008e-58 | -8.615850e-47 |
| Msa0816230 | Msa1439730 | 0.849215 | 3.730495e-60 | -8.615850e-47 |
| Msa0816230 | Msa1442260 | 0.831050 | 2.079310e-55 | -8.615850e-47 |
| Msa0816230 | Msa1457840 | 0.800919 | 1.149504e-48 | -8.615850e-47 |
| Msa0816230 | Msa1461260 | 0.804588 | 2.009726e-49 | -8.615850e-47 |
| Msa0123320 | Msa0816230 | 0.818069 | 2.376140e-52 | -8.615850e-47 |
| Msa0125590 | Msa0816230 | 0.874623 | 5.844902e-68 | -8.615850e-47 |
| Msa0127340 | Msa0816230 | 0.871469 | 6.675497e-67 | -8.615850e-47 |
| Msa0127680 | Msa0816230 | 0.821901 | 3.155095e-53 | -8.615850e-47 |
| Msa0153210 | Msa0816230 | 0.834909 | 2.281961e-56 | -8.615850e-47 |
| Msa0156050 | Msa0816230 | 0.818931 | 1.515132e-52 | -8.615850e-47 |
| Msa0156090 | Msa0816230 | 0.821591 | 3.721544e-53 | -8.615850e-47 |
| Msa0158900 | Msa0816230 | 0.805284 | 1.438149e-49 | -8.615850e-47 |
| Msa0159590 | Msa0816230 | 0.827312 | 1.677105e-54 | -8.615850e-47 |
| Msa0159620 | Msa0816230 | 0.801204 | 1.005461e-48 | -8.615850e-47 |
| Msa0165830 | Msa0816230 | 0.854595 | 1.108346e-61 | -8.615850e-47 |
| Msa0168380 | Msa0816230 | 0.830728 | 2.494235e-55 | -8.615850e-47 |
| Msa0170070 | Msa0816230 | 0.856121 | 3.984891e-62 | -8.615850e-47 |
| Msa0172590 | Msa0816230 | 0.835615 | 1.513765e-56 | -8.615850e-47 |
| Msa0186180 | Msa0816230 | 0.818383 | 2.017043e-52 | -8.615850e-47 |
| Msa0186360 | Msa0816230 | 0.840808 | 6.957259e-58 | -8.615850e-47 |
| Msa0187040 | Msa0816230 | 0.828173 | 1.041269e-54 | -8.615850e-47 |
| Msa0204970 | Msa0816230 | 0.838759 | 2.376354e-57 | -8.615850e-47 |
| Msa0225800 | Msa0816230 | 0.834513 | 2.870119e-56 | -8.615850e-47 |
| Msa0364680 | Msa0816230 | 0.844674 | 6.531903e-59 | -8.615850e-47 |
| Msa0373170 | Msa0816230 | 0.863212 | 2.924897e-64 | -8.615850e-47 |
| Msa0382230 | Msa0816230 | 0.853949 | 1.703243e-61 | -8.615850e-47 |
| Msa0383940 | Msa0816230 | 0.815128 | 1.083292e-51 | -8.615850e-47 |
| Msa0388620 | Msa0816230 | 0.808226 | 3.436428e-50 | -8.615850e-47 |
| Msa0404770 | Msa0816230 | 0.808774 | 2.625508e-50 | -8.615850e-47 |
| Msa0412130 | Msa0816230 | 0.840452 | 8.620803e-58 | -8.615850e-47 |
| Msa0413170 | Msa0816230 | 0.811843 | 5.716634e-51 | -8.615850e-47 |
| Msa0415820 | Msa0816230 | 0.830523 | 2.800126e-55 | -8.615850e-47 |
| Msa0416210 | Msa0816230 | 0.827334 | 1.656880e-54 | -8.615850e-47 |
| Msa0420670 | Msa0816230 | 0.830651 | 2.604305e-55 | -8.615850e-47 |
| Msa0421130 | Msa0816230 | 0.826020 | 3.410947e-54 | -8.615850e-47 |
| Msa0421750 | Msa0816230 | 0.861257 | 1.165279e-63 | -8.615850e-47 |
| Msa0429970 | Msa0816230 | 0.820610 | 6.264380e-53 | -8.615850e-47 |
| Msa0433630 | Msa0816230 | 0.857042 | 2.137055e-62 | -8.615850e-47 |
| Msa0433760 | Msa0816230 | 0.843167 | 1.655190e-58 | -8.615850e-47 |
| Msa0434360 | Msa0816230 | 0.811236 | 7.744206e-51 | -8.615850e-47 |
| Msa0456670 | Msa0816230 | 0.837943 | 3.856641e-57 | -8.615850e-47 |
| Msa0461550 | Msa0816230 | 0.804958 | 1.682218e-49 | -8.615850e-47 |
| Msa0466520 | Msa0816230 | 0.848734 | 5.075196e-60 | -8.615850e-47 |
| Msa0466880 | Msa0816230 | 0.801440 | 8.996408e-49 | -8.615850e-47 |
| Msa0467690 | Msa0816230 | 0.863989 | 1.678174e-64 | -8.615850e-47 |
| Msa0468620 | Msa0816230 | 0.816509 | 5.332236e-52 | -8.615850e-47 |
| Msa0468700 | Msa0816230 | 0.803848 | 2.865671e-49 | -8.615850e-47 |
| Msa0477480 | Msa0816230 | 0.842737 | 2.153967e-58 | -8.615850e-47 |
| Msa0477630 | Msa0816230 | 0.850540 | 1.589515e-60 | -8.615850e-47 |
| Msa0478140 | Msa0816230 | 0.804782 | 1.830741e-49 | -8.615850e-47 |
| Msa0480730 | Msa0816230 | 0.811581 | 6.518353e-51 | -8.615850e-47 |
| Msa0249870 | Msa0816230 | 0.845119 | 4.954474e-59 | -8.615850e-47 |
| Msa0260570 | Msa0816230 | 0.823477 | 1.356658e-53 | -8.615850e-47 |
| Msa0260630 | Msa0816230 | 0.826352 | 2.843581e-54 | -8.615850e-47 |
| Msa0272260 | Msa0816230 | 0.800527 | 1.382190e-48 | -8.615850e-47 |
| Msa0281540 | Msa0816230 | 0.869775 | 2.404819e-66 | -8.615850e-47 |
| Msa0288400 | Msa0816230 | 0.842148 | 3.086368e-58 | -8.615850e-47 |
| Msa0320250 | Msa0816230 | 0.817678 | 2.910794e-52 | -8.615850e-47 |
| Msa0320270 | Msa0816230 | 0.816769 | 4.661039e-52 | -8.615850e-47 |
| Msa0320290 | Msa0816230 | 0.829032 | 6.457683e-55 | -8.615850e-47 |
| Msa0320580 | Msa0816230 | 0.847081 | 1.448760e-59 | -8.615850e-47 |
| Msa0341680 | Msa0816230 | 0.818766 | 1.651531e-52 | -8.615850e-47 |
| Msa0342220 | Msa0816230 | 0.847117 | 1.415994e-59 | -8.615850e-47 |
| Msa0344110 | Msa0816230 | 0.853327 | 2.572145e-61 | -8.615850e-47 |
| Msa0506540 | Msa0816230 | 0.816460 | 5.466226e-52 | -8.615850e-47 |
| Msa0506880 | Msa0816230 | 0.839405 | 1.616535e-57 | -8.615850e-47 |
| Msa0507020 | Msa0816230 | 0.801291 | 9.648544e-49 | -8.615850e-47 |
| Msa0507810 | Msa0816230 | 0.840884 | 6.645203e-58 | -8.615850e-47 |
| Msa0507820 | Msa0816230 | 0.822255 | 2.612384e-53 | -8.615850e-47 |
| Msa0507920 | Msa0816230 | 0.836925 | 7.029433e-57 | -8.615850e-47 |
| Msa0512530 | Msa0816230 | 0.841998 | 3.381649e-58 | -8.615850e-47 |
| Msa0513560 | Msa0816230 | 0.812872 | 3.406432e-51 | -8.615850e-47 |
| Msa0513640 | Msa0816230 | 0.821665 | 3.577986e-53 | -8.615850e-47 |
| Msa0514020 | Msa0816230 | 0.868676 | 5.468385e-66 | -8.615850e-47 |
| Msa0514500 | Msa0816230 | 0.816965 | 4.211811e-52 | -8.615850e-47 |
| Msa0514580 | Msa0816230 | 0.802179 | 6.344067e-49 | -8.615850e-47 |
| Msa0520680 | Msa0816230 | 0.853125 | 2.938781e-61 | -8.615850e-47 |
| Msa0520870 | Msa0816230 | 0.812334 | 4.467100e-51 | -8.615850e-47 |
| Msa0521510 | Msa0816230 | 0.852773 | 3.704092e-61 | -8.615850e-47 |
| Msa0521530 | Msa0816230 | 0.831613 | 1.511931e-55 | -8.615850e-47 |
| Msa0521680 | Msa0816230 | 0.833556 | 4.983573e-56 | -8.615850e-47 |
| Msa0523380 | Msa0816230 | 0.816131 | 6.477320e-52 | -8.615850e-47 |
| Msa0524320 | Msa0816230 | 0.804632 | 1.968334e-49 | -8.615850e-47 |
| Msa0524430 | Msa0816230 | 0.807004 | 6.245725e-50 | -8.615850e-47 |
| Msa0527850 | Msa0816230 | 0.856242 | 3.671402e-62 | -8.615850e-47 |
| Msa0541740 | Msa0816230 | 0.820740 | 5.847182e-53 | -8.615850e-47 |
| Msa0544410 | Msa0816230 | 0.859627 | 3.628863e-63 | -8.615850e-47 |
| Msa0544430 | Msa0816230 | 0.820424 | 6.911355e-53 | -8.615850e-47 |
| Msa0548000 | Msa0816230 | 0.842911 | 1.935680e-58 | -8.615850e-47 |
| Msa0553750 | Msa0816230 | 0.814492 | 1.498733e-51 | -8.615850e-47 |
| Msa0554300 | Msa0816230 | 0.865703 | 4.870200e-65 | -8.615850e-47 |
| Msa0561560 | Msa0816230 | 0.864849 | 9.042663e-65 | -8.615850e-47 |
| Msa0563900 | Msa0816230 | 0.829853 | 4.079410e-55 | -8.615850e-47 |
| Msa0564980 | Msa0816230 | 0.822263 | 2.601644e-53 | -8.615850e-47 |
| Msa0572830 | Msa0816230 | 0.877949 | 4.166262e-69 | -8.615850e-47 |
| Msa0574660 | Msa0816230 | 0.804244 | 2.370988e-49 | -8.615850e-47 |
| Msa0575710 | Msa0816230 | 0.811018 | 8.635592e-51 | -8.615850e-47 |
| Msa0576330 | Msa0816230 | 0.825783 | 3.882190e-54 | -8.615850e-47 |
| Msa0577280 | Msa0816230 | 0.820778 | 5.729824e-53 | -8.615850e-47 |
| Msa0577330 | Msa0816230 | 0.822958 | 1.792995e-53 | -8.615850e-47 |
| Msa0582460 | Msa0816230 | 0.846286 | 2.389918e-59 | -8.615850e-47 |
| Msa0586200 | Msa0816230 | 0.846919 | 1.604911e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0816230 | MtrunA17_Chr5g0410931 | 100.000 | 136 | 0 | 0 | 72 | 207 | 1 | 136 | 1.47e-95 | 274 |
| Msa0816230 | MtrunA17_Chr5g0410951 | 100.000 | 136 | 0 | 0 | 72 | 207 | 1 | 136 | 1.47e-95 | 274 |
| Msa0816230 | MtrunA17_Chr8g0383851 | 100.000 | 136 | 0 | 0 | 72 | 207 | 1 | 136 | 1.47e-95 | 274 |
| Msa0816230 | MtrunA17_Chr8g0383781 | 100.000 | 136 | 0 | 0 | 72 | 207 | 1 | 136 | 1.47e-95 | 274 |
| Msa0816230 | MtrunA17_Chr8g0390361 | 100.000 | 136 | 0 | 0 | 72 | 207 | 1 | 136 | 1.47e-95 | 274 |
| Msa0816230 | MtrunA17_Chr2g0295191 | 100.000 | 136 | 0 | 0 | 72 | 207 | 1 | 136 | 1.47e-95 | 274 |
| Msa0816230 | MtrunA17_Chr7g0237661 | 100.000 | 136 | 0 | 0 | 72 | 207 | 1 | 136 | 1.47e-95 | 274 |
| Msa0816230 | MtrunA17_Chr4g0033041 | 100.000 | 136 | 0 | 0 | 72 | 207 | 1 | 136 | 1.47e-95 | 274 |
| Msa0816230 | MtrunA17_Chr7g0218971 | 100.000 | 136 | 0 | 0 | 72 | 207 | 1 | 136 | 1.47e-95 | 274 |
| Msa0816230 | MtrunA17_Chr4g0046301 | 100.000 | 136 | 0 | 0 | 72 | 207 | 1 | 136 | 1.47e-95 | 274 |
| Msa0816230 | MtrunA17_Chr8g0364801 | 100.000 | 136 | 0 | 0 | 72 | 207 | 1 | 136 | 1.47e-95 | 274 |
| Msa0816230 | MtrunA17_Chr4g0054161 | 97.059 | 136 | 4 | 0 | 72 | 207 | 1 | 136 | 2.15e-92 | 266 |
| Msa0816230 | MtrunA17_Chr8g0363741 | 97.059 | 136 | 4 | 0 | 72 | 207 | 1 | 136 | 2.15e-92 | 266 |
| Msa0816230 | MtrunA17_Chr1g0156021 | 97.059 | 136 | 4 | 0 | 72 | 207 | 1 | 136 | 2.15e-92 | 266 |
| Msa0816230 | MtrunA17_Chr4g0054151 | 97.059 | 136 | 4 | 0 | 72 | 207 | 4 | 139 | 2.21e-92 | 266 |
| Msa0816230 | MtrunA17_Chr8g0388121 | 96.324 | 136 | 5 | 0 | 72 | 207 | 1 | 136 | 7.11e-92 | 265 |
| Msa0816230 | MtrunA17_Chr2g0319141 | 89.706 | 136 | 14 | 0 | 72 | 207 | 1 | 136 | 1.67e-85 | 249 |
| Msa0816230 | MtrunA17_Chr2g0319151 | 89.706 | 136 | 14 | 0 | 72 | 207 | 1 | 136 | 1.67e-85 | 249 |
| Msa0816230 | MtrunA17_Chr2g0319131 | 85.616 | 146 | 11 | 1 | 72 | 207 | 1 | 146 | 8.84e-82 | 239 |
| Msa0816230 | MtrunA17_Chr2g0319121 | 84.559 | 136 | 19 | 2 | 72 | 206 | 1 | 135 | 1.53e-73 | 218 |
| Msa0816230 | MtrunA17_Chr7g0218961 | 86.607 | 112 | 15 | 0 | 96 | 207 | 2 | 113 | 1.83e-64 | 194 |
| Msa0816230 | MtrunA17_Chr7g0222991 | 67.164 | 134 | 43 | 1 | 72 | 205 | 10 | 142 | 2.47e-54 | 170 |
| Msa0816230 | MtrunA17_Chr5g0407311 | 67.241 | 116 | 35 | 2 | 72 | 187 | 1 | 113 | 4.43e-44 | 143 |
| Msa0816230 | MtrunA17_Chr7g0223001 | 57.343 | 143 | 46 | 6 | 72 | 205 | 10 | 146 | 1.73e-41 | 137 |
| Msa0816230 | MtrunA17_Chr7g0240791 | 100.000 | 66 | 0 | 0 | 72 | 137 | 1 | 66 | 5.11e-40 | 134 |
| Msa0816230 | MtrunA17_Chr8g0347231 | 55.102 | 98 | 43 | 1 | 108 | 204 | 28 | 125 | 4.77e-29 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0816230 | AT1G09200.1 | 99.265 | 136 | 1 | 0 | 72 | 207 | 1 | 136 | 6.35e-95 | 273 |
| Msa0816230 | AT5G65360.1 | 99.265 | 136 | 1 | 0 | 72 | 207 | 1 | 136 | 6.35e-95 | 273 |
| Msa0816230 | AT5G10390.1 | 99.265 | 136 | 1 | 0 | 72 | 207 | 1 | 136 | 6.35e-95 | 273 |
| Msa0816230 | AT5G10400.1 | 99.265 | 136 | 1 | 0 | 72 | 207 | 1 | 136 | 6.35e-95 | 273 |
| Msa0816230 | AT3G27360.1 | 99.265 | 136 | 1 | 0 | 72 | 207 | 1 | 136 | 6.35e-95 | 273 |
| Msa0816230 | AT4G40030.2 | 85.366 | 164 | 18 | 1 | 50 | 207 | 1 | 164 | 1.76e-93 | 270 |
| Msa0816230 | AT4G40030.3 | 97.059 | 136 | 4 | 0 | 72 | 207 | 1 | 136 | 2.97e-92 | 266 |
| Msa0816230 | AT4G40030.1 | 97.059 | 136 | 4 | 0 | 72 | 207 | 1 | 136 | 2.97e-92 | 266 |
| Msa0816230 | AT4G40030.4 | 97.059 | 136 | 4 | 0 | 72 | 207 | 1 | 136 | 2.97e-92 | 266 |
| Msa0816230 | AT5G10980.1 | 97.059 | 136 | 4 | 0 | 72 | 207 | 1 | 136 | 2.97e-92 | 266 |
| Msa0816230 | AT4G40040.2 | 97.059 | 136 | 4 | 0 | 72 | 207 | 1 | 136 | 2.97e-92 | 266 |
| Msa0816230 | AT4G40040.3 | 97.059 | 136 | 4 | 0 | 72 | 207 | 1 | 136 | 2.97e-92 | 266 |
| Msa0816230 | AT4G40040.1 | 97.059 | 136 | 4 | 0 | 72 | 207 | 1 | 136 | 2.97e-92 | 266 |
| Msa0816230 | AT5G65350.1 | 94.853 | 136 | 7 | 0 | 72 | 207 | 1 | 136 | 3.54e-90 | 261 |
| Msa0816230 | AT1G75600.1 | 93.382 | 136 | 9 | 0 | 72 | 207 | 1 | 136 | 2.59e-88 | 256 |
| Msa0816230 | AT1G13370.1 | 93.382 | 136 | 9 | 0 | 72 | 207 | 1 | 136 | 9.34e-88 | 254 |
| Msa0816230 | AT1G19890.1 | 89.781 | 137 | 13 | 1 | 72 | 207 | 1 | 137 | 3.94e-83 | 243 |
| Msa0816230 | AT5G12910.1 | 71.111 | 135 | 34 | 2 | 72 | 206 | 1 | 130 | 2.38e-65 | 198 |
| Msa0816230 | AT1G01370.2 | 53.982 | 113 | 49 | 2 | 95 | 205 | 63 | 174 | 8.04e-30 | 108 |
| Msa0816230 | AT1G01370.1 | 53.982 | 113 | 49 | 2 | 95 | 205 | 63 | 174 | 8.04e-30 | 108 |
| Msa0816230 | AT1G01370.4 | 53.982 | 113 | 49 | 2 | 95 | 205 | 63 | 174 | 8.04e-30 | 108 |
| Msa0816230 | AT1G01370.3 | 53.982 | 113 | 49 | 2 | 95 | 205 | 63 | 174 | 8.04e-30 | 108 |
Find 57 sgRNAs with CRISPR-Local
Find 62 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTGAGGGGAAGGGTATT+TGG | 0.206841 | 5_3:+50449415 | None:intergenic |
| CAATTTCTCTAACCAATCTT+TGG | 0.237540 | 5_3:+50449041 | None:intergenic |
| GAGAGGGAAATCTGAAGATT+TGG | 0.273601 | 5_3:+50449334 | None:intergenic |
| TGAAAATAAGAGGAAGTGTT+TGG | 0.299623 | 5_3:+50449280 | None:intergenic |
| TCACGAAGAGCGACTGTTCC+TGG | 0.301860 | 5_3:+50449115 | None:intergenic |
| TATAATGAAATTAATCCTAT+TGG | 0.327110 | 5_3:-50449465 | None:intergenic |
| GCAGCTGAAGCTTATCTTGT+TGG | 0.346066 | 5_3:-50448959 | Msa0816230:CDS |
| TTGAATATCCTTAGGCATAA+TGG | 0.349539 | 5_3:+50448889 | None:intergenic |
| AGAGGGAAATCTGAAGATTT+GGG | 0.349815 | 5_3:+50449335 | None:intergenic |
| AGCTGATTTCCGAGCGGCTT+TGG | 0.356003 | 5_3:+50449177 | None:intergenic |
| GAAGCTTCCTTTCCAAAGAT+TGG | 0.376805 | 5_3:-50449053 | Msa0816230:CDS |
| CGGAAATCAGCTCCGGCGAC+TGG | 0.383526 | 5_3:-50449166 | Msa0816230:CDS |
| GTGAAGCGAATGAAAATAAG+AGG | 0.385762 | 5_3:+50449270 | None:intergenic |
| GAAAATAAGAGGAAGTGTTT+GGG | 0.397278 | 5_3:+50449281 | None:intergenic |
| AAGATTTGGGAAGATGAGAT+TGG | 0.409914 | 5_3:+50449348 | None:intergenic |
| GAAGAATAGTGGCCGTTGAT+AGG | 0.414889 | 5_3:+50449370 | None:intergenic |
| GAGCGGAAACAGCGCTACTC+TGG | 0.433957 | 5_3:+50448990 | None:intergenic |
| TTGGTGGCGAGCTGTTTCCT+TGG | 0.436325 | 5_3:+50449196 | None:intergenic |
| TTCTTCACTCCTCCAGTCGC+CGG | 0.441465 | 5_3:+50449154 | None:intergenic |
| AAGCCCTCTCGCCTCTGATT+CGG | 0.461144 | 5_3:+50448858 | None:intergenic |
| AGGCATAATGGTAACTCTCT+TGG | 0.481302 | 5_3:+50448901 | None:intergenic |
| GGCATGAATAGCACAAAGAT+TGG | 0.490509 | 5_3:+50448922 | None:intergenic |
| TGATTTCCGAGCGGCTTTGG+TGG | 0.495094 | 5_3:+50449180 | None:intergenic |
| CGAGCAAGTTGAATATCCTT+AGG | 0.498424 | 5_3:+50448881 | None:intergenic |
| AGCCGCTCGGAAATCAGCTC+CGG | 0.498921 | 5_3:-50449173 | Msa0816230:CDS |
| AAACAGCGCTACTCTGGAAT+CGG | 0.503171 | 5_3:+50448996 | None:intergenic |
| TTATAGAGAGGAGAAGAATG+AGG | 0.504712 | 5_3:+50449308 | None:intergenic |
| AGATGAGATTGGAAGAATAG+TGG | 0.527156 | 5_3:+50449359 | None:intergenic |
| AGAGCACAGAGCTTCTCATA+AGG | 0.533669 | 5_3:-50449075 | Msa0816230:CDS |
| GGAGAAGAATGAGGAATGAG+AGG | 0.533875 | 5_3:+50449317 | None:intergenic |
| CAACTTGCTCGCCGAATCAG+AGG | 0.534605 | 5_3:-50448869 | Msa0816230:CDS |
| GGCATGTGAAAGTAACCAAT+AGG | 0.535172 | 5_3:+50449450 | None:intergenic |
| GAGAGTTACCATTATGCCTA+AGG | 0.538018 | 5_3:-50448897 | Msa0816230:CDS |
| GCTATAAGTTTCTGAGGGGA+AGG | 0.539979 | 5_3:+50449407 | None:intergenic |
| ATTGGTTAGAGAAATTGCTC+AGG | 0.542546 | 5_3:-50449035 | Msa0816230:CDS |
| TCTCTAACCAATCTTTGGAA+AGG | 0.542941 | 5_3:+50449046 | None:intergenic |
| AGCTCGCCACCAAAGCCGCT+CGG | 0.547091 | 5_3:-50449186 | Msa0816230:CDS |
| CTACGGCTATAAGTTTCTGA+GGG | 0.569010 | 5_3:+50449402 | None:intergenic |
| TTGGTTACTTTCACATGCCA+CGG | 0.575110 | 5_3:-50449446 | Msa0816230:CDS |
| TTCAGCTGCTTCTTGAAGAG+CGG | 0.576635 | 5_3:+50448973 | None:intergenic |
| TCTACGGCTATAAGTTTCTG+AGG | 0.580456 | 5_3:+50449401 | None:intergenic |
| GAGAAGAATGAGGAATGAGA+GGG | 0.584507 | 5_3:+50449318 | None:intergenic |
| GGTATTTGGATCGCGATCCG+TGG | 0.593508 | 5_3:+50449429 | None:intergenic |
| TCGCCGAATCAGAGGCGAGA+GGG | 0.598725 | 5_3:-50448861 | Msa0816230:CDS |
| CTATAAGTTTCTGAGGGGAA+GGG | 0.616763 | 5_3:+50449408 | None:intergenic |
| CAAACAGCAAGAAAATCCAC+CGG | 0.620184 | 5_3:-50449229 | Msa0816230:CDS |
| TAGATAACCATTCCTATCAA+CGG | 0.627853 | 5_3:-50449382 | Msa0816230:CDS |
| AAATCAGCTCCGGCGACTGG+AGG | 0.630058 | 5_3:-50449163 | Msa0816230:CDS |
| AAGCCACACAGATTCCGTCC+AGG | 0.632383 | 5_3:-50449133 | Msa0816230:CDS |
| CTCGCCGAATCAGAGGCGAG+AGG | 0.633846 | 5_3:-50448862 | Msa0816230:CDS |
| ATAGTGGCCGTTGATAGGAA+TGG | 0.661463 | 5_3:+50449375 | None:intergenic |
| GAAGAGCGACTGTTCCTGGA+CGG | 0.668213 | 5_3:+50449119 | None:intergenic |
| GTTCCTGGACGGAATCTGTG+TGG | 0.677012 | 5_3:+50449130 | None:intergenic |
| CCACCGGAGGAAAAGCACCA+AGG | 0.683879 | 5_3:-50449213 | Msa0816230:CDS |
| ACAGCAAGAAAATCCACCGG+AGG | 0.684797 | 5_3:-50449226 | Msa0816230:CDS |
| CGCCGGAGCTGATTTCCGAG+CGG | 0.685230 | 5_3:+50449171 | None:intergenic |
| TACGGCTATAAGTTTCTGAG+GGG | 0.701189 | 5_3:+50449403 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| TTGATAGGAATGGTTATCTA+CGG | + | chr5_3:50448935-50448954 | None:intergenic | 30.0% | |
| TAGATAACCATTCCTATCAA+CGG | - | chr5_3:50448935-50448954 | Msa0816230:CDS | 30.0% | |
| !!! | TGTTTGGGTTTTTTATAGAG+AGG | + | chr5_3:50449024-50449043 | None:intergenic | 30.0% |
| !! | GAAAATAAGAGGAAGTGTTT+GGG | + | chr5_3:50449039-50449058 | None:intergenic | 30.0% |
| !! | TGAAAATAAGAGGAAGTGTT+TGG | + | chr5_3:50449040-50449059 | None:intergenic | 30.0% |
| ! | TTTTCATTCGCTTCACAAAA+TGG | - | chr5_3:50449054-50449073 | Msa0816230:CDS | 30.0% |
| CAATTTCTCTAACCAATCTT+TGG | + | chr5_3:50449279-50449298 | None:intergenic | 30.0% | |
| TTGAATATCCTTAGGCATAA+TGG | + | chr5_3:50449431-50449450 | None:intergenic | 30.0% | |
| AGATGAGATTGGAAGAATAG+TGG | + | chr5_3:50448961-50448980 | None:intergenic | 35.0% | |
| AAGATTTGGGAAGATGAGAT+TGG | + | chr5_3:50448972-50448991 | None:intergenic | 35.0% | |
| AGAGGGAAATCTGAAGATTT+GGG | + | chr5_3:50448985-50449004 | None:intergenic | 35.0% | |
| TTATAGAGAGGAGAAGAATG+AGG | + | chr5_3:50449012-50449031 | None:intergenic | 35.0% | |
| GTGAAGCGAATGAAAATAAG+AGG | + | chr5_3:50449050-50449069 | None:intergenic | 35.0% | |
| !!! | GGATTTTCTTGCTGTTTGTT+TGG | + | chr5_3:50449086-50449105 | None:intergenic | 35.0% |
| ! | TCTCTAACCAATCTTTGGAA+AGG | + | chr5_3:50449274-50449293 | None:intergenic | 35.0% |
| ATTGGTTAGAGAAATTGCTC+AGG | - | chr5_3:50449282-50449301 | Msa0816230:CDS | 35.0% | |
| GGCATGTGAAAGTAACCAAT+AGG | + | chr5_3:50448870-50448889 | None:intergenic | 40.0% | |
| ! | TTGGTTACTTTCACATGCCA+CGG | - | chr5_3:50448871-50448890 | Msa0816230:CDS | 40.0% |
| ! | CTATAAGTTTCTGAGGGGAA+GGG | + | chr5_3:50448912-50448931 | None:intergenic | 40.0% |
| TACGGCTATAAGTTTCTGAG+GGG | + | chr5_3:50448917-50448936 | None:intergenic | 40.0% | |
| CTACGGCTATAAGTTTCTGA+GGG | + | chr5_3:50448918-50448937 | None:intergenic | 40.0% | |
| TCTACGGCTATAAGTTTCTG+AGG | + | chr5_3:50448919-50448938 | None:intergenic | 40.0% | |
| GAGAGGGAAATCTGAAGATT+TGG | + | chr5_3:50448986-50449005 | None:intergenic | 40.0% | |
| GAGAAGAATGAGGAATGAGA+GGG | + | chr5_3:50449002-50449021 | None:intergenic | 40.0% | |
| CAAACAGCAAGAAAATCCAC+CGG | - | chr5_3:50449088-50449107 | Msa0816230:CDS | 40.0% | |
| GAAGCTTCCTTTCCAAAGAT+TGG | - | chr5_3:50449264-50449283 | Msa0816230:CDS | 40.0% | |
| GGCATGAATAGCACAAAGAT+TGG | + | chr5_3:50449398-50449417 | None:intergenic | 40.0% | |
| AGGCATAATGGTAACTCTCT+TGG | + | chr5_3:50449419-50449438 | None:intergenic | 40.0% | |
| GAGAGTTACCATTATGCCTA+AGG | - | chr5_3:50449420-50449439 | Msa0816230:CDS | 40.0% | |
| ! | CGAGCAAGTTGAATATCCTT+AGG | + | chr5_3:50449439-50449458 | None:intergenic | 40.0% |
| !! | TTTCTGAGGGGAAGGGTATT+TGG | + | chr5_3:50448905-50448924 | None:intergenic | 45.0% |
| ! | GCTATAAGTTTCTGAGGGGA+AGG | + | chr5_3:50448913-50448932 | None:intergenic | 45.0% |
| ! | ATAGTGGCCGTTGATAGGAA+TGG | + | chr5_3:50448945-50448964 | None:intergenic | 45.0% |
| GAAGAATAGTGGCCGTTGAT+AGG | + | chr5_3:50448950-50448969 | None:intergenic | 45.0% | |
| GGAGAAGAATGAGGAATGAG+AGG | + | chr5_3:50449003-50449022 | None:intergenic | 45.0% | |
| !!! | TTTCCTTGGTGCTTTTCCTC+CGG | + | chr5_3:50449110-50449129 | None:intergenic | 45.0% |
| AGAGCACAGAGCTTCTCATA+AGG | - | chr5_3:50449242-50449261 | Msa0816230:CDS | 45.0% | |
| !! | AAACAGCGCTACTCTGGAAT+CGG | + | chr5_3:50449324-50449343 | None:intergenic | 45.0% |
| TTCAGCTGCTTCTTGAAGAG+CGG | + | chr5_3:50449347-50449366 | None:intergenic | 45.0% | |
| GCAGCTGAAGCTTATCTTGT+TGG | - | chr5_3:50449358-50449377 | Msa0816230:CDS | 45.0% | |
| ACAGCAAGAAAATCCACCGG+AGG | - | chr5_3:50449091-50449110 | Msa0816230:CDS | 50.0% | |
| GGTATTTGGATCGCGATCCG+TGG | + | chr5_3:50448891-50448910 | None:intergenic | 55.0% | |
| !! | TTGGTGGCGAGCTGTTTCCT+TGG | + | chr5_3:50449124-50449143 | None:intergenic | 55.0% |
| ! | TGATTTCCGAGCGGCTTTGG+TGG | + | chr5_3:50449140-50449159 | None:intergenic | 55.0% |
| ! | AGCTGATTTCCGAGCGGCTT+TGG | + | chr5_3:50449143-50449162 | None:intergenic | 55.0% |
| TTCTTCACTCCTCCAGTCGC+CGG | + | chr5_3:50449166-50449185 | None:intergenic | 55.0% | |
| AAGCCACACAGATTCCGTCC+AGG | - | chr5_3:50449184-50449203 | Msa0816230:CDS | 55.0% | |
| GTTCCTGGACGGAATCTGTG+TGG | + | chr5_3:50449190-50449209 | None:intergenic | 55.0% | |
| GAAGAGCGACTGTTCCTGGA+CGG | + | chr5_3:50449201-50449220 | None:intergenic | 55.0% | |
| TCACGAAGAGCGACTGTTCC+TGG | + | chr5_3:50449205-50449224 | None:intergenic | 55.0% | |
| ! | CAACTTGCTCGCCGAATCAG+AGG | - | chr5_3:50449448-50449467 | Msa0816230:CDS | 55.0% |
| AAGCCCTCTCGCCTCTGATT+CGG | + | chr5_3:50449462-50449481 | None:intergenic | 55.0% | |
| !!! | CCTTGGTGCTTTTCCTCCGG+TGG | + | chr5_3:50449107-50449126 | None:intergenic | 60.0% |
| !! | CCACCGGAGGAAAAGCACCA+AGG | - | chr5_3:50449104-50449123 | Msa0816230:CDS | 60.0% |
| AGCCGCTCGGAAATCAGCTC+CGG | - | chr5_3:50449144-50449163 | Msa0816230:CDS | 60.0% | |
| AAATCAGCTCCGGCGACTGG+AGG | - | chr5_3:50449154-50449173 | Msa0816230:CDS | 60.0% | |
| GAGCGGAAACAGCGCTACTC+TGG | + | chr5_3:50449330-50449349 | None:intergenic | 60.0% | |
| TCGCCGAATCAGAGGCGAGA+GGG | - | chr5_3:50449456-50449475 | Msa0816230:CDS | 60.0% | |
| AGCTCGCCACCAAAGCCGCT+CGG | - | chr5_3:50449131-50449150 | Msa0816230:CDS | 65.0% | |
| ! | CGCCGGAGCTGATTTCCGAG+CGG | + | chr5_3:50449149-50449168 | None:intergenic | 65.0% |
| CGGAAATCAGCTCCGGCGAC+TGG | - | chr5_3:50449151-50449170 | Msa0816230:CDS | 65.0% | |
| CTCGCCGAATCAGAGGCGAG+AGG | - | chr5_3:50449455-50449474 | Msa0816230:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 50448856 | 50449483 | 50448856 | ID=Msa0816230;Name=Msa0816230 |
| chr5_3 | mRNA | 50448856 | 50449483 | 50448856 | ID=Msa0816230-mRNA-1;Parent=Msa0816230;Name=Msa0816230-mRNA-1;_AED=0.18;_eAED=0.23;_QI=0|0|0|1|0|0|2|0|207 |
| chr5_3 | exon | 50449406 | 50449483 | 50449406 | ID=Msa0816230-mRNA-1:exon:15152;Parent=Msa0816230-mRNA-1 |
| chr5_3 | exon | 50448856 | 50449401 | 50448856 | ID=Msa0816230-mRNA-1:exon:15151;Parent=Msa0816230-mRNA-1 |
| chr5_3 | CDS | 50449406 | 50449483 | 50449406 | ID=Msa0816230-mRNA-1:cds;Parent=Msa0816230-mRNA-1 |
| chr5_3 | CDS | 50448856 | 50449401 | 50448856 | ID=Msa0816230-mRNA-1:cds;Parent=Msa0816230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
