Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186360 | XP_013462271.1 | 97.748 | 222 | 5 | 0 | 1 | 222 | 1 | 222 | 6.58e-156 | 441 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186360 | I3SCR3 | 97.748 | 222 | 5 | 0 | 1 | 222 | 1 | 222 | 3.14e-156 | 441 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005020 | Msa0186360 | 0.837172 | 6.078592e-57 | -8.615850e-47 |
| Msa0006840 | Msa0186360 | 0.827387 | 1.608908e-54 | -8.615850e-47 |
| Msa0015570 | Msa0186360 | 0.810028 | 1.412859e-50 | -8.615850e-47 |
| Msa0016530 | Msa0186360 | 0.840804 | 6.972402e-58 | -8.615850e-47 |
| Msa0018920 | Msa0186360 | 0.832829 | 7.562551e-56 | -8.615850e-47 |
| Msa0019930 | Msa0186360 | 0.803427 | 3.505152e-49 | -8.615850e-47 |
| Msa0020540 | Msa0186360 | 0.824127 | 9.549697e-54 | -8.615850e-47 |
| Msa0027800 | Msa0186360 | 0.849522 | 3.063366e-60 | -8.615850e-47 |
| Msa0030070 | Msa0186360 | 0.869966 | 2.083032e-66 | -8.615850e-47 |
| Msa0030690 | Msa0186360 | 0.810836 | 9.455676e-51 | -8.615850e-47 |
| Msa0032230 | Msa0186360 | 0.800920 | 1.149096e-48 | -8.615850e-47 |
| Msa0032980 | Msa0186360 | 0.843702 | 1.191048e-58 | -8.615850e-47 |
| Msa0040640 | Msa0186360 | 0.824271 | 8.836516e-54 | -8.615850e-47 |
| Msa0050530 | Msa0186360 | 0.820000 | 8.641520e-53 | -8.615850e-47 |
| Msa0053070 | Msa0186360 | 0.835423 | 1.692713e-56 | -8.615850e-47 |
| Msa0057640 | Msa0186360 | 0.814176 | 1.760205e-51 | -8.615850e-47 |
| Msa0062340 | Msa0186360 | 0.821642 | 3.622328e-53 | -8.615850e-47 |
| Msa0067060 | Msa0186360 | 0.800620 | 1.323223e-48 | -8.615850e-47 |
| Msa0074360 | Msa0186360 | 0.800127 | 1.667657e-48 | -8.615850e-47 |
| Msa0078130 | Msa0186360 | 0.878908 | 1.918554e-69 | -8.615850e-47 |
| Msa0080370 | Msa0186360 | 0.809051 | 2.290534e-50 | -8.615850e-47 |
| Msa0090440 | Msa0186360 | 0.832351 | 9.936350e-56 | -8.615850e-47 |
| Msa0091350 | Msa0186360 | 0.862510 | 4.817008e-64 | -8.615850e-47 |
| Msa0093860 | Msa0186360 | 0.834774 | 2.466923e-56 | -8.615850e-47 |
| Msa0098410 | Msa0186360 | 0.849996 | 2.258224e-60 | -8.615850e-47 |
| Msa0100600 | Msa0186360 | 0.816700 | 4.830336e-52 | -8.615850e-47 |
| Msa0100890 | Msa0186360 | 0.820332 | 7.252790e-53 | -8.615850e-47 |
| Msa0106630 | Msa0186360 | 0.856681 | 2.730250e-62 | -8.615850e-47 |
| Msa0110200 | Msa0186360 | 0.808971 | 2.383003e-50 | -8.615850e-47 |
| Msa0112670 | Msa0186360 | 0.800385 | 1.477138e-48 | -8.615850e-47 |
| Msa0123320 | Msa0186360 | 0.863110 | 3.145655e-64 | -8.615850e-47 |
| Msa0125590 | Msa0186360 | 0.881570 | 2.150840e-70 | -8.615850e-47 |
| Msa0127340 | Msa0186360 | 0.842916 | 1.930898e-58 | -8.615850e-47 |
| Msa0127680 | Msa0186360 | 0.812809 | 3.516484e-51 | -8.615850e-47 |
| Msa0140380 | Msa0186360 | 0.845733 | 3.378337e-59 | -8.615850e-47 |
| Msa0153210 | Msa0186360 | 0.852485 | 4.476021e-61 | -8.615850e-47 |
| Msa0156050 | Msa0186360 | 0.812443 | 4.228881e-51 | -8.615850e-47 |
| Msa0156090 | Msa0186360 | 0.817000 | 4.137460e-52 | -8.615850e-47 |
| Msa0158900 | Msa0186360 | 0.803231 | 3.848480e-49 | -8.615850e-47 |
| Msa0159590 | Msa0186360 | 0.838494 | 2.781943e-57 | -8.615850e-47 |
| Msa0159620 | Msa0186360 | 0.815801 | 7.672290e-52 | -8.615850e-47 |
| Msa0160160 | Msa0186360 | 0.820892 | 5.393399e-53 | -8.615850e-47 |
| Msa0160170 | Msa0186360 | 0.823046 | 1.710465e-53 | -8.615850e-47 |
| Msa0165830 | Msa0186360 | 0.837538 | 4.898540e-57 | -8.615850e-47 |
| Msa0168050 | Msa0186360 | 0.827153 | 1.830472e-54 | -8.615850e-47 |
| Msa0168380 | Msa0186360 | 0.801481 | 8.825186e-49 | -8.615850e-47 |
| Msa0170070 | Msa0186360 | 0.850742 | 1.394388e-60 | -8.615850e-47 |
| Msa0184700 | Msa0186360 | 0.824378 | 8.338584e-54 | -8.615850e-47 |
| Msa0186180 | Msa0186360 | 0.860977 | 1.417818e-63 | -8.615850e-47 |
| Msa0186360 | Msa0190730 | 0.818970 | 1.484073e-52 | -8.615850e-47 |
| Msa0186360 | Msa0204970 | 0.811868 | 5.644486e-51 | -8.615850e-47 |
| Msa0186360 | Msa0225800 | 0.800973 | 1.120716e-48 | -8.615850e-47 |
| Msa0186360 | Msa0249870 | 0.802171 | 6.368557e-49 | -8.615850e-47 |
| Msa0186360 | Msa0265310 | 0.814290 | 1.661258e-51 | -8.615850e-47 |
| Msa0186360 | Msa0272260 | 0.816853 | 4.463864e-52 | -8.615850e-47 |
| Msa0186360 | Msa0281540 | 0.826930 | 2.070092e-54 | -8.615850e-47 |
| Msa0186360 | Msa0320580 | 0.823864 | 1.100677e-53 | -8.615850e-47 |
| Msa0186360 | Msa0341680 | 0.815689 | 8.129889e-52 | -8.615850e-47 |
| Msa0186360 | Msa0344110 | 0.827468 | 1.538374e-54 | -8.615850e-47 |
| Msa0186360 | Msa0349550 | 0.808073 | 3.705247e-50 | -8.615850e-47 |
| Msa0186360 | Msa0367150 | 0.805028 | 1.626299e-49 | -8.615850e-47 |
| Msa0186360 | Msa0368860 | 0.827995 | 1.149499e-54 | -8.615850e-47 |
| Msa0186360 | Msa0373170 | 0.859818 | 3.178725e-63 | -8.615850e-47 |
| Msa0186360 | Msa0373500 | 0.830866 | 2.307158e-55 | -8.615850e-47 |
| Msa0186360 | Msa0373590 | 0.820674 | 6.053048e-53 | -8.615850e-47 |
| Msa0186360 | Msa0382230 | 0.834933 | 2.250434e-56 | -8.615850e-47 |
| Msa0186360 | Msa0383000 | 0.831034 | 2.097650e-55 | -8.615850e-47 |
| Msa0186360 | Msa0383940 | 0.813449 | 2.545636e-51 | -8.615850e-47 |
| Msa0186360 | Msa0412130 | 0.828245 | 1.000695e-54 | -8.615850e-47 |
| Msa0186360 | Msa0413170 | 0.814214 | 1.726717e-51 | -8.615850e-47 |
| Msa0186360 | Msa0415820 | 0.829644 | 4.585983e-55 | -8.615850e-47 |
| Msa0186360 | Msa0416160 | 0.821911 | 3.138557e-53 | -8.615850e-47 |
| Msa0186360 | Msa0420670 | 0.830976 | 2.167859e-55 | -8.615850e-47 |
| Msa0186360 | Msa0421130 | 0.832180 | 1.094865e-55 | -8.615850e-47 |
| Msa0186360 | Msa0421750 | 0.866370 | 2.997435e-65 | -8.615850e-47 |
| Msa0186360 | Msa0432010 | 0.827329 | 1.661088e-54 | -8.615850e-47 |
| Msa0186360 | Msa0433150 | 0.823237 | 1.543568e-53 | -8.615850e-47 |
| Msa0186360 | Msa0433630 | 0.841523 | 4.514218e-58 | -8.615850e-47 |
| Msa0186360 | Msa0433760 | 0.849068 | 4.098572e-60 | -8.615850e-47 |
| Msa0186360 | Msa0434360 | 0.808213 | 3.459185e-50 | -8.615850e-47 |
| Msa0186360 | Msa0454560 | 0.812945 | 3.284049e-51 | -8.615850e-47 |
| Msa0186360 | Msa0456670 | 0.837396 | 5.328591e-57 | -8.615850e-47 |
| Msa0186360 | Msa0462780 | 0.840368 | 9.068504e-58 | -8.615850e-47 |
| Msa0186360 | Msa0466520 | 0.844836 | 5.905941e-59 | -8.615850e-47 |
| Msa0186360 | Msa0466880 | 0.824713 | 6.951827e-54 | -8.615850e-47 |
| Msa0186360 | Msa0467690 | 0.858981 | 5.670041e-63 | -8.615850e-47 |
| Msa0186360 | Msa0468620 | 0.853708 | 1.999009e-61 | -8.615850e-47 |
| Msa0186360 | Msa0468700 | 0.805198 | 1.498775e-49 | -8.615850e-47 |
| Msa0186360 | Msa0477480 | 0.813636 | 2.315675e-51 | -8.615850e-47 |
| Msa0186360 | Msa0477630 | 0.840804 | 6.972479e-58 | -8.615850e-47 |
| Msa0186360 | Msa0478140 | 0.856815 | 2.491985e-62 | -8.615850e-47 |
| Msa0186360 | Msa0478200 | 0.847818 | 9.092280e-60 | -8.615850e-47 |
| Msa0186360 | Msa0480730 | 0.842505 | 2.481588e-58 | -8.615850e-47 |
| Msa0186360 | Msa0481890 | 0.821266 | 4.424701e-53 | -8.615850e-47 |
| Msa0186360 | Msa0503990 | 0.808299 | 3.316665e-50 | -8.615850e-47 |
| Msa0186360 | Msa0506540 | 0.832015 | 1.202894e-55 | -8.615850e-47 |
| Msa0186360 | Msa0506880 | 0.816211 | 6.216218e-52 | -8.615850e-47 |
| Msa0186360 | Msa0507020 | 0.808048 | 3.750189e-50 | -8.615850e-47 |
| Msa0186360 | Msa0507810 | 0.821442 | 4.028113e-53 | -8.615850e-47 |
| Msa0186360 | Msa0507820 | 0.804081 | 2.563845e-49 | -8.615850e-47 |
| Msa0186360 | Msa0507920 | 0.817134 | 3.860069e-52 | -8.615850e-47 |
| Msa0186360 | Msa0512530 | 0.838237 | 3.239339e-57 | -8.615850e-47 |
| Msa0186360 | Msa0513560 | 0.847275 | 1.281944e-59 | -8.615850e-47 |
| Msa0186360 | Msa0513640 | 0.816216 | 6.200140e-52 | -8.615850e-47 |
| Msa0186360 | Msa0514020 | 0.879701 | 1.004823e-69 | -8.615850e-47 |
| Msa0186360 | Msa0514500 | 0.854085 | 1.556299e-61 | -8.615850e-47 |
| Msa0186360 | Msa0514580 | 0.801130 | 1.041100e-48 | -8.615850e-47 |
| Msa0186360 | Msa0520680 | 0.833680 | 4.640627e-56 | -8.615850e-47 |
| Msa0186360 | Msa0520870 | 0.841734 | 3.969642e-58 | -8.615850e-47 |
| Msa0186360 | Msa0521510 | 0.821764 | 3.394233e-53 | -8.615850e-47 |
| Msa0186360 | Msa0521530 | 0.819351 | 1.215559e-52 | -8.615850e-47 |
| Msa0186360 | Msa0521680 | 0.851551 | 8.243317e-61 | -8.615850e-47 |
| Msa0186360 | Msa0523380 | 0.917066 | 8.344143e-86 | -8.615850e-47 |
| Msa0186360 | Msa0527850 | 0.859819 | 3.176387e-63 | -8.615850e-47 |
| Msa0186360 | Msa0541740 | 0.844818 | 5.971948e-59 | -8.615850e-47 |
| Msa0186360 | Msa0544410 | 0.823903 | 1.077775e-53 | -8.615850e-47 |
| Msa0186360 | Msa0544430 | 0.808946 | 2.412366e-50 | -8.615850e-47 |
| Msa0186360 | Msa0548000 | 0.804109 | 2.529232e-49 | -8.615850e-47 |
| Msa0186360 | Msa0550590 | 0.811429 | 7.031420e-51 | -8.615850e-47 |
| Msa0186360 | Msa0553750 | 0.820735 | 5.863682e-53 | -8.615850e-47 |
| Msa0186360 | Msa0554300 | 0.876112 | 1.808784e-68 | -8.615850e-47 |
| Msa0186360 | Msa0559100 | 0.814297 | 1.655349e-51 | -8.615850e-47 |
| Msa0186360 | Msa0561560 | 0.826367 | 2.820238e-54 | -8.615850e-47 |
| Msa0186360 | Msa0563900 | 0.827435 | 1.567133e-54 | -8.615850e-47 |
| Msa0186360 | Msa0564980 | 0.808623 | 2.827959e-50 | -8.615850e-47 |
| Msa0186360 | Msa0569530 | 0.810826 | 9.503655e-51 | -8.615850e-47 |
| Msa0186360 | Msa0572830 | 0.854781 | 9.790044e-62 | -8.615850e-47 |
| Msa0186360 | Msa0577280 | 0.826037 | 3.378681e-54 | -8.615850e-47 |
| Msa0186360 | Msa0577330 | 0.829320 | 5.498901e-55 | -8.615850e-47 |
| Msa0186360 | Msa0582460 | 0.842505 | 2.481795e-58 | -8.615850e-47 |
| Msa0186360 | Msa0584530 | 0.843650 | 1.229498e-58 | -8.615850e-47 |
| Msa0186360 | Msa0586200 | 0.860308 | 2.261265e-63 | -8.615850e-47 |
| Msa0186360 | Msa0603410 | 0.801507 | 8.713691e-49 | -8.615850e-47 |
| Msa0186360 | Msa0606100 | 0.818318 | 2.086886e-52 | -8.615850e-47 |
| Msa0186360 | Msa0607800 | 0.852116 | 5.702158e-61 | -8.615850e-47 |
| Msa0186360 | Msa0608350 | 0.833945 | 3.984578e-56 | -8.615850e-47 |
| Msa0186360 | Msa0612410 | 0.807000 | 6.259165e-50 | -8.615850e-47 |
| Msa0186360 | Msa0613580 | 0.806940 | 6.442607e-50 | -8.615850e-47 |
| Msa0186360 | Msa0613630 | 0.839075 | 1.967868e-57 | -8.615850e-47 |
| Msa0186360 | Msa0615630 | 0.842502 | 2.487378e-58 | -8.615850e-47 |
| Msa0186360 | Msa0618840 | 0.800570 | 1.354927e-48 | -8.615850e-47 |
| Msa0186360 | Msa0620500 | 0.852787 | 3.671489e-61 | -8.615850e-47 |
| Msa0186360 | Msa0621710 | 0.812822 | 3.494176e-51 | -8.615850e-47 |
| Msa0186360 | Msa0622920 | 0.828809 | 7.313238e-55 | -8.615850e-47 |
| Msa0186360 | Msa0625620 | 0.831662 | 1.469927e-55 | -8.615850e-47 |
| Msa0186360 | Msa0640800 | 0.812824 | 3.490159e-51 | -8.615850e-47 |
| Msa0186360 | Msa0647050 | 0.822772 | 1.980558e-53 | -8.615850e-47 |
| Msa0186360 | Msa0647440 | 0.852940 | 3.318922e-61 | -8.615850e-47 |
| Msa0186360 | Msa0648040 | 0.864298 | 1.344721e-64 | -8.615850e-47 |
| Msa0186360 | Msa0648760 | 0.869298 | 3.437650e-66 | -8.615850e-47 |
| Msa0186360 | Msa0654740 | 0.807395 | 5.162866e-50 | -8.615850e-47 |
| Msa0186360 | Msa0657210 | 0.843241 | 1.581419e-58 | -8.615850e-47 |
| Msa0186360 | Msa0659200 | 0.822819 | 1.931557e-53 | -8.615850e-47 |
| Msa0186360 | Msa0663290 | 0.841020 | 6.120080e-58 | -8.615850e-47 |
| Msa0186360 | Msa0664070 | 0.837155 | 6.142515e-57 | -8.615850e-47 |
| Msa0186360 | Msa0688380 | 0.816383 | 5.690220e-52 | -8.615850e-47 |
| Msa0186360 | Msa0690320 | 0.840279 | 9.566183e-58 | -8.615850e-47 |
| Msa0186360 | Msa0690570 | 0.809451 | 1.880266e-50 | -8.615850e-47 |
| Msa0186360 | Msa0690740 | 0.862882 | 3.698371e-64 | -8.615850e-47 |
| Msa0186360 | Msa0691270 | 0.839597 | 1.440779e-57 | -8.615850e-47 |
| Msa0186360 | Msa0698730 | 0.814796 | 1.283455e-51 | -8.615850e-47 |
| Msa0186360 | Msa0701250 | 0.846052 | 2.767134e-59 | -8.615850e-47 |
| Msa0186360 | Msa0705180 | 0.812047 | 5.160096e-51 | -8.615850e-47 |
| Msa0186360 | Msa0707260 | 0.831352 | 1.752557e-55 | -8.615850e-47 |
| Msa0186360 | Msa0708980 | 0.800910 | 1.154429e-48 | -8.615850e-47 |
| Msa0186360 | Msa0709440 | 0.818126 | 2.306256e-52 | -8.615850e-47 |
| Msa0186360 | Msa0713920 | 0.835183 | 1.946241e-56 | -8.615850e-47 |
| Msa0186360 | Msa0714520 | 0.869172 | 3.777813e-66 | -8.615850e-47 |
| Msa0186360 | Msa0716480 | 0.803193 | 3.917518e-49 | -8.615850e-47 |
| Msa0186360 | Msa0717830 | 0.819348 | 1.217652e-52 | -8.615850e-47 |
| Msa0186360 | Msa0717900 | 0.862253 | 5.777416e-64 | -8.615850e-47 |
| Msa0186360 | Msa0720280 | 0.838315 | 3.093927e-57 | -8.615850e-47 |
| Msa0186360 | Msa0737130 | 0.822012 | 2.973886e-53 | -8.615850e-47 |
| Msa0186360 | Msa0737140 | 0.802980 | 4.335884e-49 | -8.615850e-47 |
| Msa0186360 | Msa0743440 | 0.811296 | 7.516677e-51 | -8.615850e-47 |
| Msa0186360 | Msa0747740 | 0.839857 | 1.233183e-57 | -8.615850e-47 |
| Msa0186360 | Msa0750520 | 0.802039 | 6.777344e-49 | -8.615850e-47 |
| Msa0186360 | Msa0754450 | 0.808176 | 3.522600e-50 | -8.615850e-47 |
| Msa0186360 | Msa0758590 | 0.824352 | 8.455256e-54 | -8.615850e-47 |
| Msa0186360 | Msa0758650 | 0.811748 | 5.993512e-51 | -8.615850e-47 |
| Msa0186360 | Msa0763550 | 0.817916 | 2.572085e-52 | -8.615850e-47 |
| Msa0186360 | Msa0778600 | 0.818104 | 2.332722e-52 | -8.615850e-47 |
| Msa0186360 | Msa0780910 | 0.820779 | 5.727180e-53 | -8.615850e-47 |
| Msa0186360 | Msa0800660 | 0.820920 | 5.315471e-53 | -8.615850e-47 |
| Msa0186360 | Msa0803140 | 0.839665 | 1.383328e-57 | -8.615850e-47 |
| Msa0186360 | Msa0811020 | 0.805487 | 1.303968e-49 | -8.615850e-47 |
| Msa0186360 | Msa0816080 | 0.866506 | 2.713710e-65 | -8.615850e-47 |
| Msa0186360 | Msa0816230 | 0.840808 | 6.957259e-58 | -8.615850e-47 |
| Msa0186360 | Msa0821160 | 0.825560 | 4.385688e-54 | -8.615850e-47 |
| Msa0186360 | Msa0837460 | 0.812319 | 4.500786e-51 | -8.615850e-47 |
| Msa0186360 | Msa0837680 | 0.845333 | 4.334639e-59 | -8.615850e-47 |
| Msa0186360 | Msa0841500 | 0.842894 | 1.956386e-58 | -8.615850e-47 |
| Msa0186360 | Msa0846900 | 0.822122 | 2.804526e-53 | -8.615850e-47 |
| Msa0186360 | Msa0851300 | 0.805521 | 1.282643e-49 | -8.615850e-47 |
| Msa0186360 | Msa0856610 | 0.805800 | 1.120573e-49 | -8.615850e-47 |
| Msa0186360 | Msa0861440 | 0.869677 | 2.588293e-66 | -8.615850e-47 |
| Msa0186360 | Msa0863620 | 0.805619 | 1.223098e-49 | -8.615850e-47 |
| Msa0186360 | Msa0866530 | 0.833780 | 4.379959e-56 | -8.615850e-47 |
| Msa0186360 | Msa0879920 | 0.867405 | 1.401870e-65 | -8.615850e-47 |
| Msa0186360 | Msa0897790 | 0.816590 | 5.112641e-52 | -8.615850e-47 |
| Msa0186360 | Msa0900090 | 0.805847 | 1.095453e-49 | -8.615850e-47 |
| Msa0186360 | Msa0900760 | 0.812094 | 5.039386e-51 | -8.615850e-47 |
| Msa0186360 | Msa0909760 | 0.809469 | 1.863616e-50 | -8.615850e-47 |
| Msa0186360 | Msa0926310 | 0.887979 | 8.864268e-73 | -8.615850e-47 |
| Msa0186360 | Msa0930040 | 0.829072 | 6.314118e-55 | -8.615850e-47 |
| Msa0186360 | Msa0931310 | 0.821347 | 4.238418e-53 | -8.615850e-47 |
| Msa0186360 | Msa0931590 | 0.821561 | 3.782512e-53 | -8.615850e-47 |
| Msa0186360 | Msa0945900 | 0.803922 | 2.765731e-49 | -8.615850e-47 |
| Msa0186360 | Msa0955370 | 0.830298 | 3.178013e-55 | -8.615850e-47 |
| Msa0186360 | Msa0963370 | 0.817120 | 3.887391e-52 | -8.615850e-47 |
| Msa0186360 | Msa0976380 | 0.814469 | 1.516782e-51 | -8.615850e-47 |
| Msa0186360 | Msa0989370 | 0.830450 | 2.916393e-55 | -8.615850e-47 |
| Msa0186360 | Msa1000780 | 0.881052 | 3.305944e-70 | -8.615850e-47 |
| Msa0186360 | Msa1000970 | 0.808430 | 3.109684e-50 | -8.615850e-47 |
| Msa0186360 | Msa1002640 | 0.829596 | 4.711764e-55 | -8.615850e-47 |
| Msa0186360 | Msa1008670 | 0.870811 | 1.100322e-66 | -8.615850e-47 |
| Msa0186360 | Msa1008680 | 0.810344 | 1.207591e-50 | -8.615850e-47 |
| Msa0186360 | Msa1033920 | 0.841974 | 3.431899e-58 | -8.615850e-47 |
| Msa0186360 | Msa1034400 | 0.847186 | 1.356384e-59 | -8.615850e-47 |
| Msa0186360 | Msa1060900 | 0.820398 | 7.006536e-53 | -8.615850e-47 |
| Msa0186360 | Msa1071410 | 0.806018 | 1.008281e-49 | -8.615850e-47 |
| Msa0186360 | Msa1074150 | 0.873426 | 1.483905e-67 | -8.615850e-47 |
| Msa0186360 | Msa1076020 | 0.855366 | 6.621679e-62 | -8.615850e-47 |
| Msa0186360 | Msa1078860 | 0.845342 | 4.311760e-59 | -8.615850e-47 |
| Msa0186360 | Msa1078990 | 0.844933 | 5.562136e-59 | -8.615850e-47 |
| Msa0186360 | Msa1082380 | 0.816546 | 5.230798e-52 | -8.615850e-47 |
| Msa0186360 | Msa1084530 | 0.820791 | 5.691023e-53 | -8.615850e-47 |
| Msa0186360 | Msa1098060 | 0.806530 | 7.866326e-50 | -8.615850e-47 |
| Msa0186360 | Msa1104110 | 0.817074 | 3.981618e-52 | -8.615850e-47 |
| Msa0186360 | Msa1106220 | 0.809311 | 2.014619e-50 | -8.615850e-47 |
| Msa0186360 | Msa1114630 | 0.812440 | 4.235188e-51 | -8.615850e-47 |
| Msa0186360 | Msa1116190 | 0.822773 | 1.979432e-53 | -8.615850e-47 |
| Msa0186360 | Msa1125820 | 0.823190 | 1.582617e-53 | -8.615850e-47 |
| Msa0186360 | Msa1125990 | 0.818239 | 2.174235e-52 | -8.615850e-47 |
| Msa0186360 | Msa1127280 | 0.820949 | 5.233049e-53 | -8.615850e-47 |
| Msa0186360 | Msa1147560 | 0.803127 | 4.043188e-49 | -8.615850e-47 |
| Msa0186360 | Msa1147700 | 0.804214 | 2.405389e-49 | -8.615850e-47 |
| Msa0186360 | Msa1148630 | 0.821564 | 3.775463e-53 | -8.615850e-47 |
| Msa0186360 | Msa1149450 | 0.830543 | 2.768607e-55 | -8.615850e-47 |
| Msa0186360 | Msa1159590 | 0.853141 | 2.906692e-61 | -8.615850e-47 |
| Msa0186360 | Msa1160930 | 0.818234 | 2.180006e-52 | -8.615850e-47 |
| Msa0186360 | Msa1162880 | 0.835853 | 1.317112e-56 | -8.615850e-47 |
| Msa0186360 | Msa1163180 | 0.864644 | 1.048350e-64 | -8.615850e-47 |
| Msa0186360 | Msa1165480 | 0.818804 | 1.618621e-52 | -8.615850e-47 |
| Msa0186360 | Msa1169170 | 0.826841 | 2.174475e-54 | -8.615850e-47 |
| Msa0186360 | Msa1169690 | 0.863125 | 3.112521e-64 | -8.615850e-47 |
| Msa0186360 | Msa1171290 | 0.812438 | 4.238941e-51 | -8.615850e-47 |
| Msa0186360 | Msa1183740 | 0.809447 | 1.884053e-50 | -8.615850e-47 |
| Msa0186360 | Msa1188340 | 0.805565 | 1.255597e-49 | -8.615850e-47 |
| Msa0186360 | Msa1188790 | 0.832887 | 7.314969e-56 | -8.615850e-47 |
| Msa0186360 | Msa1190390 | 0.830101 | 3.549352e-55 | -8.615850e-47 |
| Msa0186360 | Msa1191000 | 0.843818 | 1.108803e-58 | -8.615850e-47 |
| Msa0186360 | Msa1201170 | 0.808329 | 3.267269e-50 | -8.615850e-47 |
| Msa0186360 | Msa1201780 | 0.837755 | 4.310090e-57 | -8.615850e-47 |
| Msa0186360 | Msa1206040 | 0.827157 | 1.826688e-54 | -8.615850e-47 |
| Msa0186360 | Msa1211640 | 0.807660 | 4.535465e-50 | -8.615850e-47 |
| Msa0186360 | Msa1213830 | 0.841138 | 5.697472e-58 | -8.615850e-47 |
| Msa0186360 | Msa1214350 | 0.829777 | 4.258130e-55 | -8.615850e-47 |
| Msa0186360 | Msa1215980 | 0.852956 | 3.284613e-61 | -8.615850e-47 |
| Msa0186360 | Msa1218820 | 0.838407 | 2.929593e-57 | -8.615850e-47 |
| Msa0186360 | Msa1219770 | 0.819695 | 1.014503e-52 | -8.615850e-47 |
| Msa0186360 | Msa1220030 | 0.819524 | 1.109954e-52 | -8.615850e-47 |
| Msa0186360 | Msa1223390 | 0.822088 | 2.856359e-53 | -8.615850e-47 |
| Msa0186360 | Msa1231780 | 0.804640 | 1.960085e-49 | -8.615850e-47 |
| Msa0186360 | Msa1240940 | 0.836356 | 9.819542e-57 | -8.615850e-47 |
| Msa0186360 | Msa1242960 | 0.805963 | 1.035739e-49 | -8.615850e-47 |
| Msa0186360 | Msa1244690 | 0.809928 | 1.485027e-50 | -8.615850e-47 |
| Msa0186360 | Msa1254100 | 0.800604 | 1.333313e-48 | -8.615850e-47 |
| Msa0186360 | Msa1254420 | 0.862321 | 5.504762e-64 | -8.615850e-47 |
| Msa0186360 | Msa1254540 | 0.870091 | 1.895573e-66 | -8.615850e-47 |
| Msa0186360 | Msa1261050 | 0.823917 | 1.069632e-53 | -8.615850e-47 |
| Msa0186360 | Msa1263740 | 0.848524 | 5.803007e-60 | -8.615850e-47 |
| Msa0186360 | Msa1263780 | 0.849367 | 3.384198e-60 | -8.615850e-47 |
| Msa0186360 | Msa1266690 | 0.814172 | 1.763813e-51 | -8.615850e-47 |
| Msa0186360 | Msa1267930 | 0.844720 | 6.348771e-59 | -8.615850e-47 |
| Msa0186360 | Msa1268540 | 0.835256 | 1.865542e-56 | -8.615850e-47 |
| Msa0186360 | Msa1279120 | 0.800620 | 1.323186e-48 | -8.615850e-47 |
| Msa0186360 | Msa1282300 | 0.836534 | 8.847678e-57 | -8.615850e-47 |
| Msa0186360 | Msa1293570 | 0.813894 | 2.031407e-51 | -8.615850e-47 |
| Msa0186360 | Msa1293610 | 0.825092 | 5.659571e-54 | -8.615850e-47 |
| Msa0186360 | Msa1294280 | 0.818736 | 1.678003e-52 | -8.615850e-47 |
| Msa0186360 | Msa1294460 | 0.862274 | 5.692791e-64 | -8.615850e-47 |
| Msa0186360 | Msa1294790 | 0.884704 | 1.527892e-71 | -8.615850e-47 |
| Msa0186360 | Msa1297070 | 0.821175 | 4.643994e-53 | -8.615850e-47 |
| Msa0186360 | Msa1300460 | 0.849852 | 2.478561e-60 | -8.615850e-47 |
| Msa0186360 | Msa1301820 | 0.862799 | 3.923267e-64 | -8.615850e-47 |
| Msa0186360 | Msa1301830 | 0.801694 | 7.978927e-49 | -8.615850e-47 |
| Msa0186360 | Msa1305780 | 0.821435 | 4.043655e-53 | -8.615850e-47 |
| Msa0186360 | Msa1305920 | 0.842819 | 2.048742e-58 | -8.615850e-47 |
| Msa0186360 | Msa1306790 | 0.805718 | 1.165874e-49 | -8.615850e-47 |
| Msa0186360 | Msa1321530 | 0.814110 | 1.820137e-51 | -8.615850e-47 |
| Msa0186360 | Msa1328870 | 0.825612 | 4.262561e-54 | -8.615850e-47 |
| Msa0186360 | Msa1332950 | 0.857670 | 1.393843e-62 | -8.615850e-47 |
| Msa0186360 | Msa1333360 | 0.814368 | 1.596464e-51 | -8.615850e-47 |
| Msa0186360 | Msa1339170 | 0.849635 | 2.849224e-60 | -8.615850e-47 |
| Msa0186360 | Msa1339230 | 0.866489 | 2.745864e-65 | -8.615850e-47 |
| Msa0186360 | Msa1361930 | 0.809026 | 2.319131e-50 | -8.615850e-47 |
| Msa0186360 | Msa1364410 | 0.802300 | 5.989264e-49 | -8.615850e-47 |
| Msa0186360 | Msa1364680 | 0.809689 | 1.670898e-50 | -8.615850e-47 |
| Msa0186360 | Msa1365500 | 0.845374 | 4.225206e-59 | -8.615850e-47 |
| Msa0186360 | Msa1368750 | 0.829168 | 5.985588e-55 | -8.615850e-47 |
| Msa0186360 | Msa1374790 | 0.825758 | 3.935501e-54 | -8.615850e-47 |
| Msa0186360 | Msa1381470 | 0.860572 | 1.881339e-63 | -8.615850e-47 |
| Msa0186360 | Msa1387440 | 0.816463 | 5.459356e-52 | -8.615850e-47 |
| Msa0186360 | Msa1387500 | 0.847600 | 1.043815e-59 | -8.615850e-47 |
| Msa0186360 | Msa1389820 | 0.801768 | 7.704302e-49 | -8.615850e-47 |
| Msa0186360 | Msa1390210 | 0.817072 | 3.986327e-52 | -8.615850e-47 |
| Msa0186360 | Msa1393560 | 0.847738 | 9.560274e-60 | -8.615850e-47 |
| Msa0186360 | Msa1399190 | 0.878873 | 1.974001e-69 | -8.615850e-47 |
| Msa0186360 | Msa1406720 | 0.850566 | 1.563096e-60 | -8.615850e-47 |
| Msa0186360 | Msa1410190 | 0.803402 | 3.546111e-49 | -8.615850e-47 |
| Msa0186360 | Msa1417060 | 0.800606 | 1.331871e-48 | -8.615850e-47 |
| Msa0186360 | Msa1426320 | 0.846643 | 1.909173e-59 | -8.615850e-47 |
| Msa0186360 | Msa1432520 | 0.857812 | 1.264321e-62 | -8.615850e-47 |
| Msa0186360 | Msa1434380 | 0.807809 | 4.216919e-50 | -8.615850e-47 |
| Msa0186360 | Msa1434640 | 0.846915 | 1.609381e-59 | -8.615850e-47 |
| Msa0186360 | Msa1435100 | 0.833007 | 6.827001e-56 | -8.615850e-47 |
| Msa0186360 | Msa1438300 | 0.802739 | 4.862857e-49 | -8.615850e-47 |
| Msa0186360 | Msa1439730 | 0.841819 | 3.769642e-58 | -8.615850e-47 |
| Msa0186360 | Msa1442260 | 0.823765 | 1.161197e-53 | -8.615850e-47 |
| Msa0186360 | Msa1444930 | 0.801721 | 7.878455e-49 | -8.615850e-47 |
| Msa0186360 | Msa1450190 | 0.820568 | 6.405186e-53 | -8.615850e-47 |
| Msa0186360 | Msa1451820 | 0.825903 | 3.635972e-54 | -8.615850e-47 |
| Msa0186360 | Msa1457840 | 0.833534 | 5.047503e-56 | -8.615850e-47 |
| Msa0186360 | Msa1459010 | 0.810234 | 1.275485e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186360 | MtrunA17_Chr3g0143871 | 97.748 | 222 | 5 | 0 | 1 | 222 | 1 | 222 | 6.05e-160 | 441 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186360 | AT5G42330.1 | 47.208 | 197 | 83 | 10 | 6 | 194 | 2 | 185 | 5.02e-37 | 129 |
Find 68 sgRNAs with CRISPR-Local
Find 156 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCACAATTGCTTCTGAATTT+AGG | 0.081710 | 2_1:-1072425 | Msa0186360:CDS |
| CGTCTATAACGGTCATATTT+TGG | 0.147501 | 2_1:+1072828 | None:intergenic |
| CACAATTGCTTCTGAATTTA+GGG | 0.195473 | 2_1:-1072424 | Msa0186360:CDS |
| TGAAACAGAACACCAGATTT+AGG | 0.204443 | 2_1:+1072327 | None:intergenic |
| GAAGCAATTGTGCGGTATTC+AGG | 0.265276 | 2_1:+1072435 | None:intergenic |
| AGGATGGTTCGTGACGAATT+TGG | 0.279654 | 2_1:-1072393 | Msa0186360:CDS |
| TCGGTCGCGGTGGTCGGAGG+TGG | 0.289193 | 2_1:+1072681 | None:intergenic |
| TGGTCGGAGGTGGGATTTCA+TGG | 0.291163 | 2_1:+1072691 | None:intergenic |
| GAAACAGAACACCAGATTTA+GGG | 0.318085 | 2_1:+1072328 | None:intergenic |
| CCAGATCCGGAAGAAATTAA+TGG | 0.326179 | 2_1:-1072366 | Msa0186360:CDS |
| CCATTAATTTCTTCCGGATC+TGG | 0.333300 | 2_1:+1072366 | None:intergenic |
| TTTAACCAAGTCTCGGAAAC+TGG | 0.342643 | 2_1:-1072478 | Msa0186360:CDS |
| AGATTTAGGGTTACAAGAAT+TGG | 0.342948 | 2_1:+1072341 | None:intergenic |
| ACTTGATTTAATATGATGTA+TGG | 0.345815 | 2_1:-1071911 | Msa0186360:three_prime_UTR |
| CTTGGTGTTACTGTTGAATC+TGG | 0.346379 | 2_1:-1072174 | Msa0186360:CDS |
| TTGGTACCATTAATTTCTTC+CGG | 0.348296 | 2_1:+1072360 | None:intergenic |
| ATGATGAGTATTCTGCAAAA+AGG | 0.356084 | 2_1:-1072290 | Msa0186360:CDS |
| CGAAGACGCATCGGAGACTT+AGG | 0.358488 | 2_1:+1072656 | None:intergenic |
| CGGTATTCAGGTCGTAGTTC+AGG | 0.361330 | 2_1:+1072447 | None:intergenic |
| AATAATCATCATAATGTTCT+TGG | 0.387259 | 2_1:-1072192 | Msa0186360:CDS |
| AATTCTTGTAACCCTAAATC+TGG | 0.396987 | 2_1:-1072339 | Msa0186360:CDS |
| TATATAATGAATAAATCAAA+TGG | 0.403779 | 2_1:+1071816 | None:intergenic |
| AAGAATACTGCAAGAAAACT+TGG | 0.439698 | 2_1:-1072147 | Msa0186360:CDS |
| CCCTCTCTTCAAACTCCACC+AGG | 0.453304 | 2_1:-1072611 | Msa0186360:intron |
| GAGAGGTTGAAGAGAAAGAA+AGG | 0.462625 | 2_1:-1072264 | Msa0186360:CDS |
| TAGGGATCGGTCGCGGTGGT+CGG | 0.470489 | 2_1:+1072675 | None:intergenic |
| TTGAACCAGTTTCCGAGACT+TGG | 0.470567 | 2_1:+1072473 | None:intergenic |
| CGGTCGCGGTGGTCGGAGGT+GGG | 0.481693 | 2_1:+1072682 | None:intergenic |
| GTAGCGAGGGTTTGAGTCAA+AGG | 0.490870 | 2_1:+1072789 | None:intergenic |
| CTGAATTTAGGGCTTTATCA+AGG | 0.492327 | 2_1:-1072413 | Msa0186360:CDS |
| CGAATTTGGAAAACCAGATC+CGG | 0.501998 | 2_1:-1072379 | Msa0186360:CDS |
| AATAAGAAACCTCCTCTAGC+TGG | 0.510440 | 2_1:-1072039 | Msa0186360:CDS |
| AAAATGTATCAATTTCCATT+CGG | 0.511455 | 2_1:+1071848 | None:intergenic |
| TACTAGTATTAAGCAAACTA+AGG | 0.520435 | 2_1:-1072217 | Msa0186360:CDS |
| GTTGGAGCATCGAGAAGAGT+AGG | 0.523400 | 2_1:-1071976 | Msa0186360:CDS |
| ACTGTTGGTGAGAAGAAAGT+TGG | 0.529021 | 2_1:-1071994 | Msa0186360:CDS |
| GGATCGGTCGCGGTGGTCGG+AGG | 0.529657 | 2_1:+1072678 | None:intergenic |
| ATTTAGGGCTTTATCAAGGA+TGG | 0.529903 | 2_1:-1072409 | Msa0186360:CDS |
| CCTGGTGGAGTTTGAAGAGA+GGG | 0.535099 | 2_1:+1072611 | None:intergenic |
| CATGCTTAGAAGCATGACTA+AGG | 0.538545 | 2_1:-1072064 | Msa0186360:CDS |
| ATATAATGAATAAATCAAAT+GGG | 0.543691 | 2_1:+1071817 | None:intergenic |
| CAGGTTCTTTAACCAAGTCT+CGG | 0.545491 | 2_1:-1072485 | Msa0186360:CDS |
| TTCTGCTGCTTATTCTGCTG+AGG | 0.545660 | 2_1:-1072106 | Msa0186360:CDS |
| TGTGACTGAAAATGCGGTGC+GGG | 0.546036 | 2_1:+1072743 | None:intergenic |
| CTTGATTTAATATGATGTAT+GGG | 0.551596 | 2_1:-1071910 | Msa0186360:three_prime_UTR |
| TTTGATAAATCTGTTACTGT+TGG | 0.555181 | 2_1:-1072009 | Msa0186360:CDS |
| ACCTGGTGGAGTTTGAAGAG+AGG | 0.555239 | 2_1:+1072610 | None:intergenic |
| GAAGACGCATCGGAGACTTA+GGG | 0.556071 | 2_1:+1072657 | None:intergenic |
| GGATCCAACGGCTGATGTTG+TGG | 0.565817 | 2_1:+1072849 | None:intergenic |
| AAATCCACAACATCAGCCGT+TGG | 0.577335 | 2_1:-1072853 | Msa0186360:five_prime_UTR |
| ATAGAAGAGAGCGTCTATAA+CGG | 0.577974 | 2_1:+1072817 | None:intergenic |
| TCAAATCTTGAACCAGCTAG+AGG | 0.605228 | 2_1:+1072027 | None:intergenic |
| CGCATCGGAGACTTAGGGAT+CGG | 0.618390 | 2_1:+1072662 | None:intergenic |
| ATGCTTCTAAGCATGTACCT+TGG | 0.620137 | 2_1:+1072072 | None:intergenic |
| AAGAGAGGGAGAGTCAAGAA+CGG | 0.623596 | 2_1:+1072625 | None:intergenic |
| GTTCGAGTTCGAAGACGCAT+CGG | 0.624113 | 2_1:+1072647 | None:intergenic |
| GGAGACTTAGGGATCGGTCG+CGG | 0.628168 | 2_1:+1072668 | None:intergenic |
| AATCTTGAACCAGCTAGAGG+AGG | 0.634666 | 2_1:+1072030 | None:intergenic |
| GATTGTGGCAAAGAGTAGCG+AGG | 0.635030 | 2_1:+1072775 | None:intergenic |
| CTGAGGTTAGTGAAACTCCA+AGG | 0.641822 | 2_1:-1072089 | Msa0186360:CDS |
| GACTTAGGGATCGGTCGCGG+TGG | 0.645567 | 2_1:+1072671 | None:intergenic |
| ATTGTGGCAAAGAGTAGCGA+GGG | 0.654080 | 2_1:+1072776 | None:intergenic |
| GAAGAGAAAGAAAGGAGTCA+CGG | 0.667345 | 2_1:-1072256 | Msa0186360:CDS |
| TCTGGTGTTCTGTTTCAGAG+AGG | 0.698623 | 2_1:-1072321 | Msa0186360:CDS |
| GCAATGTGTGACTGAAAATG+CGG | 0.711864 | 2_1:+1072737 | None:intergenic |
| TAAATTCAGAAGCAATTGTG+CGG | 0.713706 | 2_1:+1072427 | None:intergenic |
| GAGAAAGAAAGGAGTCACGG+TGG | 0.729465 | 2_1:-1072253 | Msa0186360:CDS |
| GTGTGACTGAAAATGCGGTG+CGG | 0.745677 | 2_1:+1072742 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATCATCATAATGTTCT+TGG | - | chr2_1:1072511-1072530 | Msa0186360:intron | 20.0% |
| !! | ACTTGATTTAATATGATGTA+TGG | - | chr2_1:1072792-1072811 | Msa0186360:five_prime_UTR | 20.0% |
| !! | CTTGATTTAATATGATGTAT+GGG | - | chr2_1:1072793-1072812 | Msa0186360:five_prime_UTR | 20.0% |
| !! | AAAATGTATCAATTTCCATT+CGG | + | chr2_1:1072858-1072877 | None:intergenic | 20.0% |
| !! | AATAATCATCATAATGTTCT+TGG | - | chr2_1:1072511-1072530 | Msa0186360:intron | 20.0% |
| !! | ACTTGATTTAATATGATGTA+TGG | - | chr2_1:1072792-1072811 | Msa0186360:five_prime_UTR | 20.0% |
| !! | CTTGATTTAATATGATGTAT+GGG | - | chr2_1:1072793-1072812 | Msa0186360:five_prime_UTR | 20.0% |
| !! | AAAATGTATCAATTTCCATT+CGG | + | chr2_1:1072858-1072877 | None:intergenic | 20.0% |
| ! | GAAATAAGATTATAAGAACC+TGG | + | chr2_1:1072113-1072132 | None:intergenic | 25.0% |
| ! | TACTAGTATTAAGCAAACTA+AGG | - | chr2_1:1072486-1072505 | Msa0186360:intron | 25.0% |
| ! | TTTGATAAATCTGTTACTGT+TGG | - | chr2_1:1072694-1072713 | Msa0186360:CDS | 25.0% |
| ! | AGGAAAAATTTCGTACTATT+AGG | - | chr2_1:1072747-1072766 | Msa0186360:five_prime_UTR | 25.0% |
| ! | GGAAAAATTTCGTACTATTA+GGG | - | chr2_1:1072748-1072767 | Msa0186360:five_prime_UTR | 25.0% |
| ! | GAAATAAGATTATAAGAACC+TGG | + | chr2_1:1072113-1072132 | None:intergenic | 25.0% |
| ! | TACTAGTATTAAGCAAACTA+AGG | - | chr2_1:1072486-1072505 | Msa0186360:intron | 25.0% |
| ! | TTTGATAAATCTGTTACTGT+TGG | - | chr2_1:1072694-1072713 | Msa0186360:CDS | 25.0% |
| ! | AGGAAAAATTTCGTACTATT+AGG | - | chr2_1:1072747-1072766 | Msa0186360:five_prime_UTR | 25.0% |
| ! | GGAAAAATTTCGTACTATTA+GGG | - | chr2_1:1072748-1072767 | Msa0186360:five_prime_UTR | 25.0% |
| ATGTTGTGGATTTCAAAAAG+TGG | + | chr2_1:1071843-1071862 | None:intergenic | 30.0% | |
| ATAAGATTATAAGAACCTGG+TGG | + | chr2_1:1072110-1072129 | None:intergenic | 30.0% | |
| CCACAAACAAAAAATGTCAA+TGG | + | chr2_1:1072183-1072202 | None:intergenic | 30.0% | |
| !!! | CCATTGACATTTTTTGTTTG+TGG | - | chr2_1:1072180-1072199 | Msa0186360:CDS | 30.0% |
| GTGGATTTGAAAATTGAAAC+AGG | - | chr2_1:1072199-1072218 | Msa0186360:CDS | 30.0% | |
| TAAATTCAGAAGCAATTGTG+CGG | + | chr2_1:1072279-1072298 | None:intergenic | 30.0% | |
| CACAATTGCTTCTGAATTTA+GGG | - | chr2_1:1072279-1072298 | Msa0186360:CDS | 30.0% | |
| TTGGTACCATTAATTTCTTC+CGG | + | chr2_1:1072346-1072365 | None:intergenic | 30.0% | |
| ! | AGATTTAGGGTTACAAGAAT+TGG | + | chr2_1:1072365-1072384 | None:intergenic | 30.0% |
| AATTCTTGTAACCCTAAATC+TGG | - | chr2_1:1072364-1072383 | Msa0186360:CDS | 30.0% | |
| ATGATGAGTATTCTGCAAAA+AGG | - | chr2_1:1072413-1072432 | Msa0186360:CDS | 30.0% | |
| AAGAATACTGCAAGAAAACT+TGG | - | chr2_1:1072556-1072575 | Msa0186360:intron | 30.0% | |
| !!! | TTCTGTTACTTTTTACCGAA+TGG | - | chr2_1:1072840-1072859 | Msa0186360:five_prime_UTR | 30.0% |
| ATGTTGTGGATTTCAAAAAG+TGG | + | chr2_1:1071843-1071862 | None:intergenic | 30.0% | |
| ATAAGATTATAAGAACCTGG+TGG | + | chr2_1:1072110-1072129 | None:intergenic | 30.0% | |
| CCACAAACAAAAAATGTCAA+TGG | + | chr2_1:1072183-1072202 | None:intergenic | 30.0% | |
| !!! | CCATTGACATTTTTTGTTTG+TGG | - | chr2_1:1072180-1072199 | Msa0186360:CDS | 30.0% |
| GTGGATTTGAAAATTGAAAC+AGG | - | chr2_1:1072199-1072218 | Msa0186360:CDS | 30.0% | |
| TAAATTCAGAAGCAATTGTG+CGG | + | chr2_1:1072279-1072298 | None:intergenic | 30.0% | |
| CACAATTGCTTCTGAATTTA+GGG | - | chr2_1:1072279-1072298 | Msa0186360:CDS | 30.0% | |
| TTGGTACCATTAATTTCTTC+CGG | + | chr2_1:1072346-1072365 | None:intergenic | 30.0% | |
| ! | AGATTTAGGGTTACAAGAAT+TGG | + | chr2_1:1072365-1072384 | None:intergenic | 30.0% |
| AATTCTTGTAACCCTAAATC+TGG | - | chr2_1:1072364-1072383 | Msa0186360:CDS | 30.0% | |
| ATGATGAGTATTCTGCAAAA+AGG | - | chr2_1:1072413-1072432 | Msa0186360:CDS | 30.0% | |
| AAGAATACTGCAAGAAAACT+TGG | - | chr2_1:1072556-1072575 | Msa0186360:intron | 30.0% | |
| !!! | TTCTGTTACTTTTTACCGAA+TGG | - | chr2_1:1072840-1072859 | Msa0186360:five_prime_UTR | 30.0% |
| ! | CGTCTATAACGGTCATATTT+TGG | + | chr2_1:1071878-1071897 | None:intergenic | 35.0% |
| !! | ATAGAAGAGAGCGTCTATAA+CGG | + | chr2_1:1071889-1071908 | None:intergenic | 35.0% |
| !! | TGCGGGTTTTTATTTGATTG+TGG | + | chr2_1:1071946-1071965 | None:intergenic | 35.0% |
| GCACAATTGCTTCTGAATTT+AGG | - | chr2_1:1072278-1072297 | Msa0186360:CDS | 35.0% | |
| ! | CTGAATTTAGGGCTTTATCA+AGG | - | chr2_1:1072290-1072309 | Msa0186360:CDS | 35.0% |
| ! | ATTTAGGGCTTTATCAAGGA+TGG | - | chr2_1:1072294-1072313 | Msa0186360:CDS | 35.0% |
| GAAACAGAACACCAGATTTA+GGG | + | chr2_1:1072378-1072397 | None:intergenic | 35.0% | |
| TGAAACAGAACACCAGATTT+AGG | + | chr2_1:1072379-1072398 | None:intergenic | 35.0% | |
| ! | CGTCTATAACGGTCATATTT+TGG | + | chr2_1:1071878-1071897 | None:intergenic | 35.0% |
| !! | ATAGAAGAGAGCGTCTATAA+CGG | + | chr2_1:1071889-1071908 | None:intergenic | 35.0% |
| !! | TGCGGGTTTTTATTTGATTG+TGG | + | chr2_1:1071946-1071965 | None:intergenic | 35.0% |
| GCACAATTGCTTCTGAATTT+AGG | - | chr2_1:1072278-1072297 | Msa0186360:CDS | 35.0% | |
| ! | CTGAATTTAGGGCTTTATCA+AGG | - | chr2_1:1072290-1072309 | Msa0186360:CDS | 35.0% |
| ! | ATTTAGGGCTTTATCAAGGA+TGG | - | chr2_1:1072294-1072313 | Msa0186360:CDS | 35.0% |
| GAAACAGAACACCAGATTTA+GGG | + | chr2_1:1072378-1072397 | None:intergenic | 35.0% | |
| TGAAACAGAACACCAGATTT+AGG | + | chr2_1:1072379-1072398 | None:intergenic | 35.0% | |
| !! | CGGTCATATTTTGGATCCAA+CGG | + | chr2_1:1071869-1071888 | None:intergenic | 40.0% |
| GCAATGTGTGACTGAAAATG+CGG | + | chr2_1:1071969-1071988 | None:intergenic | 40.0% | |
| CAGGTTCTTTAACCAAGTCT+CGG | - | chr2_1:1072218-1072237 | Msa0186360:CDS | 40.0% | |
| TTTAACCAAGTCTCGGAAAC+TGG | - | chr2_1:1072225-1072244 | Msa0186360:CDS | 40.0% | |
| CGAATTTGGAAAACCAGATC+CGG | - | chr2_1:1072324-1072343 | Msa0186360:CDS | 40.0% | |
| CCATTAATTTCTTCCGGATC+TGG | + | chr2_1:1072340-1072359 | None:intergenic | 40.0% | |
| CCAGATCCGGAAGAAATTAA+TGG | - | chr2_1:1072337-1072356 | Msa0186360:CDS | 40.0% | |
| ATTCTGCAAAAAGGAACGAG+AGG | - | chr2_1:1072422-1072441 | Msa0186360:CDS | 40.0% | |
| GAGAGGTTGAAGAGAAAGAA+AGG | - | chr2_1:1072439-1072458 | Msa0186360:CDS | 40.0% | |
| GAAGAGAAAGAAAGGAGTCA+CGG | - | chr2_1:1072447-1072466 | Msa0186360:CDS | 40.0% | |
| !! | CTTGGTGTTACTGTTGAATC+TGG | - | chr2_1:1072529-1072548 | Msa0186360:intron | 40.0% |
| ATGCTTCTAAGCATGTACCT+TGG | + | chr2_1:1072634-1072653 | None:intergenic | 40.0% | |
| ! | CATGCTTAGAAGCATGACTA+AGG | - | chr2_1:1072639-1072658 | Msa0186360:CDS | 40.0% |
| AATAAGAAACCTCCTCTAGC+TGG | - | chr2_1:1072664-1072683 | Msa0186360:CDS | 40.0% | |
| TCAAATCTTGAACCAGCTAG+AGG | + | chr2_1:1072679-1072698 | None:intergenic | 40.0% | |
| ! | ACTGTTGGTGAGAAGAAAGT+TGG | - | chr2_1:1072709-1072728 | Msa0186360:CDS | 40.0% |
| !! | CGGTCATATTTTGGATCCAA+CGG | + | chr2_1:1071869-1071888 | None:intergenic | 40.0% |
| GCAATGTGTGACTGAAAATG+CGG | + | chr2_1:1071969-1071988 | None:intergenic | 40.0% | |
| CAGGTTCTTTAACCAAGTCT+CGG | - | chr2_1:1072218-1072237 | Msa0186360:CDS | 40.0% | |
| TTTAACCAAGTCTCGGAAAC+TGG | - | chr2_1:1072225-1072244 | Msa0186360:CDS | 40.0% | |
| CGAATTTGGAAAACCAGATC+CGG | - | chr2_1:1072324-1072343 | Msa0186360:CDS | 40.0% | |
| CCATTAATTTCTTCCGGATC+TGG | + | chr2_1:1072340-1072359 | None:intergenic | 40.0% | |
| CCAGATCCGGAAGAAATTAA+TGG | - | chr2_1:1072337-1072356 | Msa0186360:CDS | 40.0% | |
| ATTCTGCAAAAAGGAACGAG+AGG | - | chr2_1:1072422-1072441 | Msa0186360:CDS | 40.0% | |
| GAGAGGTTGAAGAGAAAGAA+AGG | - | chr2_1:1072439-1072458 | Msa0186360:CDS | 40.0% | |
| GAAGAGAAAGAAAGGAGTCA+CGG | - | chr2_1:1072447-1072466 | Msa0186360:CDS | 40.0% | |
| !! | CTTGGTGTTACTGTTGAATC+TGG | - | chr2_1:1072529-1072548 | Msa0186360:intron | 40.0% |
| ATGCTTCTAAGCATGTACCT+TGG | + | chr2_1:1072634-1072653 | None:intergenic | 40.0% | |
| ! | CATGCTTAGAAGCATGACTA+AGG | - | chr2_1:1072639-1072658 | Msa0186360:CDS | 40.0% |
| AATAAGAAACCTCCTCTAGC+TGG | - | chr2_1:1072664-1072683 | Msa0186360:CDS | 40.0% | |
| TCAAATCTTGAACCAGCTAG+AGG | + | chr2_1:1072679-1072698 | None:intergenic | 40.0% | |
| ! | ACTGTTGGTGAGAAGAAAGT+TGG | - | chr2_1:1072709-1072728 | Msa0186360:CDS | 40.0% |
| AAATCCACAACATCAGCCGT+TGG | - | chr2_1:1071850-1071869 | Msa0186360:three_prime_UTR | 45.0% | |
| ATTGTGGCAAAGAGTAGCGA+GGG | + | chr2_1:1071930-1071949 | None:intergenic | 45.0% | |
| AAGAGAGGGAGAGTCAAGAA+CGG | + | chr2_1:1072081-1072100 | None:intergenic | 45.0% | |
| TTGAACCAGTTTCCGAGACT+TGG | + | chr2_1:1072233-1072252 | None:intergenic | 45.0% | |
| GAAGCAATTGTGCGGTATTC+AGG | + | chr2_1:1072271-1072290 | None:intergenic | 45.0% | |
| AGGATGGTTCGTGACGAATT+TGG | - | chr2_1:1072310-1072329 | Msa0186360:CDS | 45.0% | |
| TCTGGTGTTCTGTTTCAGAG+AGG | - | chr2_1:1072382-1072401 | Msa0186360:CDS | 45.0% | |
| ! | TTCTGCTGCTTATTCTGCTG+AGG | - | chr2_1:1072597-1072616 | Msa0186360:intron | 45.0% |
| CTGAGGTTAGTGAAACTCCA+AGG | - | chr2_1:1072614-1072633 | Msa0186360:CDS | 45.0% | |
| AATCTTGAACCAGCTAGAGG+AGG | + | chr2_1:1072676-1072695 | None:intergenic | 45.0% | |
| AAATCCACAACATCAGCCGT+TGG | - | chr2_1:1071850-1071869 | Msa0186360:three_prime_UTR | 45.0% | |
| ATTGTGGCAAAGAGTAGCGA+GGG | + | chr2_1:1071930-1071949 | None:intergenic | 45.0% | |
| AAGAGAGGGAGAGTCAAGAA+CGG | + | chr2_1:1072081-1072100 | None:intergenic | 45.0% | |
| TTGAACCAGTTTCCGAGACT+TGG | + | chr2_1:1072233-1072252 | None:intergenic | 45.0% | |
| GAAGCAATTGTGCGGTATTC+AGG | + | chr2_1:1072271-1072290 | None:intergenic | 45.0% | |
| AGGATGGTTCGTGACGAATT+TGG | - | chr2_1:1072310-1072329 | Msa0186360:CDS | 45.0% | |
| TCTGGTGTTCTGTTTCAGAG+AGG | - | chr2_1:1072382-1072401 | Msa0186360:CDS | 45.0% | |
| ! | TTCTGCTGCTTATTCTGCTG+AGG | - | chr2_1:1072597-1072616 | Msa0186360:intron | 45.0% |
| CTGAGGTTAGTGAAACTCCA+AGG | - | chr2_1:1072614-1072633 | Msa0186360:CDS | 45.0% | |
| AATCTTGAACCAGCTAGAGG+AGG | + | chr2_1:1072676-1072695 | None:intergenic | 45.0% | |
| GTAGCGAGGGTTTGAGTCAA+AGG | + | chr2_1:1071917-1071936 | None:intergenic | 50.0% | |
| GATTGTGGCAAAGAGTAGCG+AGG | + | chr2_1:1071931-1071950 | None:intergenic | 50.0% | |
| TGTGACTGAAAATGCGGTGC+GGG | + | chr2_1:1071963-1071982 | None:intergenic | 50.0% | |
| GTGTGACTGAAAATGCGGTG+CGG | + | chr2_1:1071964-1071983 | None:intergenic | 50.0% | |
| GAAGACGCATCGGAGACTTA+GGG | + | chr2_1:1072049-1072068 | None:intergenic | 50.0% | |
| ! | GTTCGAGTTCGAAGACGCAT+CGG | + | chr2_1:1072059-1072078 | None:intergenic | 50.0% |
| CCTGGTGGAGTTTGAAGAGA+GGG | + | chr2_1:1072095-1072114 | None:intergenic | 50.0% | |
| ACCTGGTGGAGTTTGAAGAG+AGG | + | chr2_1:1072096-1072115 | None:intergenic | 50.0% | |
| CGGTATTCAGGTCGTAGTTC+AGG | + | chr2_1:1072259-1072278 | None:intergenic | 50.0% | |
| GAGAAAGAAAGGAGTCACGG+TGG | - | chr2_1:1072450-1072469 | Msa0186360:CDS | 50.0% | |
| !! | GTTGGAGCATCGAGAAGAGT+AGG | - | chr2_1:1072727-1072746 | Msa0186360:exon | 50.0% |
| GTAGCGAGGGTTTGAGTCAA+AGG | + | chr2_1:1071917-1071936 | None:intergenic | 50.0% | |
| GATTGTGGCAAAGAGTAGCG+AGG | + | chr2_1:1071931-1071950 | None:intergenic | 50.0% | |
| TGTGACTGAAAATGCGGTGC+GGG | + | chr2_1:1071963-1071982 | None:intergenic | 50.0% | |
| GTGTGACTGAAAATGCGGTG+CGG | + | chr2_1:1071964-1071983 | None:intergenic | 50.0% | |
| GAAGACGCATCGGAGACTTA+GGG | + | chr2_1:1072049-1072068 | None:intergenic | 50.0% | |
| ! | GTTCGAGTTCGAAGACGCAT+CGG | + | chr2_1:1072059-1072078 | None:intergenic | 50.0% |
| CCTGGTGGAGTTTGAAGAGA+GGG | + | chr2_1:1072095-1072114 | None:intergenic | 50.0% | |
| ACCTGGTGGAGTTTGAAGAG+AGG | + | chr2_1:1072096-1072115 | None:intergenic | 50.0% | |
| CGGTATTCAGGTCGTAGTTC+AGG | + | chr2_1:1072259-1072278 | None:intergenic | 50.0% | |
| GAGAAAGAAAGGAGTCACGG+TGG | - | chr2_1:1072450-1072469 | Msa0186360:CDS | 50.0% | |
| !! | GTTGGAGCATCGAGAAGAGT+AGG | - | chr2_1:1072727-1072746 | Msa0186360:exon | 50.0% |
| GGATCCAACGGCTGATGTTG+TGG | + | chr2_1:1071857-1071876 | None:intergenic | 55.0% | |
| TGGTCGGAGGTGGGATTTCA+TGG | + | chr2_1:1072015-1072034 | None:intergenic | 55.0% | |
| CGCATCGGAGACTTAGGGAT+CGG | + | chr2_1:1072044-1072063 | None:intergenic | 55.0% | |
| CGAAGACGCATCGGAGACTT+AGG | + | chr2_1:1072050-1072069 | None:intergenic | 55.0% | |
| CCCTCTCTTCAAACTCCACC+AGG | - | chr2_1:1072092-1072111 | Msa0186360:CDS | 55.0% | |
| GGATCCAACGGCTGATGTTG+TGG | + | chr2_1:1071857-1071876 | None:intergenic | 55.0% | |
| TGGTCGGAGGTGGGATTTCA+TGG | + | chr2_1:1072015-1072034 | None:intergenic | 55.0% | |
| CGCATCGGAGACTTAGGGAT+CGG | + | chr2_1:1072044-1072063 | None:intergenic | 55.0% | |
| CGAAGACGCATCGGAGACTT+AGG | + | chr2_1:1072050-1072069 | None:intergenic | 55.0% | |
| CCCTCTCTTCAAACTCCACC+AGG | - | chr2_1:1072092-1072111 | Msa0186360:CDS | 55.0% | |
| GGAGACTTAGGGATCGGTCG+CGG | + | chr2_1:1072038-1072057 | None:intergenic | 60.0% | |
| GGAGACTTAGGGATCGGTCG+CGG | + | chr2_1:1072038-1072057 | None:intergenic | 60.0% | |
| TAGGGATCGGTCGCGGTGGT+CGG | + | chr2_1:1072031-1072050 | None:intergenic | 65.0% | |
| GACTTAGGGATCGGTCGCGG+TGG | + | chr2_1:1072035-1072054 | None:intergenic | 65.0% | |
| TAGGGATCGGTCGCGGTGGT+CGG | + | chr2_1:1072031-1072050 | None:intergenic | 65.0% | |
| GACTTAGGGATCGGTCGCGG+TGG | + | chr2_1:1072035-1072054 | None:intergenic | 65.0% | |
| CGGTCGCGGTGGTCGGAGGT+GGG | + | chr2_1:1072024-1072043 | None:intergenic | 75.0% | |
| TCGGTCGCGGTGGTCGGAGG+TGG | + | chr2_1:1072025-1072044 | None:intergenic | 75.0% | |
| GGATCGGTCGCGGTGGTCGG+AGG | + | chr2_1:1072028-1072047 | None:intergenic | 75.0% | |
| CGGTCGCGGTGGTCGGAGGT+GGG | + | chr2_1:1072024-1072043 | None:intergenic | 75.0% | |
| TCGGTCGCGGTGGTCGGAGG+TGG | + | chr2_1:1072025-1072044 | None:intergenic | 75.0% | |
| GGATCGGTCGCGGTGGTCGG+AGG | + | chr2_1:1072028-1072047 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 1071825 | 1072900 | 1071825 | ID=Msa0186360;Name=Msa0186360 |
| chr2_1 | mRNA | 1071825 | 1072900 | 1071825 | ID=Msa0186360-mRNA-1;Parent=Msa0186360;Name=Msa0186360-mRNA-1;_AED=0.01;_eAED=0.01;_QI=168|1|1|1|1|1|2|132|222 |
| chr2_1 | exon | 1071825 | 1072504 | 1071825 | ID=Msa0186360-mRNA-1:exon:438;Parent=Msa0186360-mRNA-1 |
| chr2_1 | exon | 1072612 | 1072900 | 1072612 | ID=Msa0186360-mRNA-1:exon:437;Parent=Msa0186360-mRNA-1 |
| chr2_1 | five_prime_UTR | 1072733 | 1072900 | 1072733 | ID=Msa0186360-mRNA-1:five_prime_utr;Parent=Msa0186360-mRNA-1 |
| chr2_1 | CDS | 1072612 | 1072732 | 1072612 | ID=Msa0186360-mRNA-1:cds;Parent=Msa0186360-mRNA-1 |
| chr2_1 | CDS | 1071957 | 1072504 | 1071957 | ID=Msa0186360-mRNA-1:cds;Parent=Msa0186360-mRNA-1 |
| chr2_1 | three_prime_UTR | 1071825 | 1071956 | 1071825 | ID=Msa0186360-mRNA-1:three_prime_utr;Parent=Msa0186360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
