AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1432520


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1432520 MtrunA17_Chr1g0184201 95.833 336 14 0 1 336 1 336 0.0 646
Msa1432520 MtrunA17_Chr6g0482501 38.298 188 98 4 88 260 25 209 1.88e-34 132
Msa1432520 MtrunA17_Chr5g0409391 47.561 82 42 1 116 197 33 113 2.42e-17 77.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1432520 AT2G31270.1 51.389 216 89 4 39 245 41 249 8.78e-51 177
Msa1432520 AT3G54710.1 50.311 161 77 3 87 247 27 184 1.59e-45 162

Find 144 sgRNAs with CRISPR-Local

Find 237 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTTGCAGGTATGAGAATT+TGG 0.208186 tig0027109:-43804 Msa1432520:intron
AGTGATGCTCTTAAGGATTC+AGG 0.231310 tig0027109:+41467 None:intergenic
ATTAGATTGTTGCGATTAAA+AGG 0.237039 tig0027109:-43752 Msa1432520:CDS
TGATCTACTTTCATATATTT+AGG 0.240656 tig0027109:-41332 Msa1432520:three_prime_UTR
TCAGTTAAAGTTTCAATCTT+TGG 0.243781 tig0027109:+43701 None:intergenic
TGAGTGAAGAAGAAGAATTT+TGG 0.250730 tig0027109:+44331 None:intergenic
TGGGTGAATGTAAGAGAAAT+TGG 0.259359 tig0027109:+44351 None:intergenic
TGTTGCAGGTATGAGAATTT+GGG 0.273987 tig0027109:-43803 Msa1432520:intron
TCCATTCTTAATTAATTTCA+TGG 0.281488 tig0027109:+41245 None:intergenic
AAGCGCAACGCCGCGGTTGC+GGG 0.283254 tig0027109:+44137 None:intergenic
GTGCGCGACTCAATGAGTTT+TGG 0.299833 tig0027109:-43386 Msa1432520:CDS
GCTAAGTTGTTGTCTGAATC+TGG 0.304619 tig0027109:-43435 Msa1432520:CDS
TTCTTCAAGTGATGCTCTTA+AGG 0.317807 tig0027109:+41460 None:intergenic
GAGAGGCAACTGCCGGCTTC+TGG 0.332877 tig0027109:+42623 None:intergenic
CGGCGTTGCGCTTTCGATAT+CGG 0.348179 tig0027109:-44127 Msa1432520:CDS
ATATTTAGGAGAGGTAAAAT+TGG 0.352217 tig0027109:-41318 Msa1432520:three_prime_UTR
GGGTGAATGTAAGAGAAATT+GGG 0.355405 tig0027109:+44352 None:intergenic
TCTGCAACAAGAAACATTTC+CGG 0.356727 tig0027109:+41222 None:intergenic
GAGGTTTACCCATGCTCATT+TGG 0.363872 tig0027109:-43583 Msa1432520:CDS
GCATCAAACTCAACTGCATC+AGG 0.365765 tig0027109:+43456 None:intergenic
CGCAGGATGTGCTTCACTAC+TGG 0.371534 tig0027109:+42427 None:intergenic
GAAGCACATCCTGCGATTCA+TGG 0.382505 tig0027109:-42419 Msa1432520:three_prime_UTR
AGCTGGTAGAGTTGTCGTCT+GGG 0.393195 tig0027109:+42204 None:intergenic
AGATTGAAACTTTAACTGAT+AGG 0.395153 tig0027109:-43697 Msa1432520:intron
GAGCTGGTAGAGTTGTCGTC+TGG 0.402340 tig0027109:+42203 None:intergenic
CTCAAGCTTGACTCTGAAAC+AGG 0.405661 tig0027109:+42509 None:intergenic
AAAGCGCAACGCCGCGGTTG+CGG 0.415732 tig0027109:+44136 None:intergenic
TTTGCTTTCTGTATACTCAA+TGG 0.428293 tig0027109:+42343 None:intergenic
ACCGAATGGAGAAGATTATC+CGG 0.434254 tig0027109:+42062 None:intergenic
CGCCTTCTCAGAAATCCATT+CGG 0.435905 tig0027109:+41629 None:intergenic
TGAATCATGTTAAAGAGCTT+AGG 0.436584 tig0027109:+41862 None:intergenic
CCCGGATAATCTTCTCCATT+CGG 0.449170 tig0027109:-42063 Msa1432520:intron
GTTAAAGAGCTTAGGGAGGC+TGG 0.452098 tig0027109:+41870 None:intergenic
GTAGCTGACATCAGCCTGGC+TGG 0.454247 tig0027109:+42263 None:intergenic
GCCTTCTCAGAAATCCATTC+GGG 0.459518 tig0027109:+41630 None:intergenic
CAATGAAATGACGTCGTTGA+AGG 0.463806 tig0027109:-44058 Msa1432520:CDS
ACATGACTTTCTGAGTTAGC+AGG 0.467209 tig0027109:+42682 None:intergenic
GGCTCAGGCAGCATTTCCTC+TGG 0.468683 tig0027109:+42820 None:intergenic
TTGCGGGTTCGCATCGGTGG+TGG 0.469410 tig0027109:+44153 None:intergenic
AAGAATAGCAATGGAGGAAA+GGG 0.469721 tig0027109:-41935 Msa1432520:three_prime_UTR
ACCATGAAATTAATTAAGAA+TGG 0.469813 tig0027109:-41246 Msa1432520:three_prime_UTR
TGAAGGGAAAATCTGCTAGA+AGG 0.477915 tig0027109:-44041 Msa1432520:CDS
GTGATGCTCTTAAGGATTCA+GGG 0.478740 tig0027109:+41468 None:intergenic
GAGTATACAGAAAGCAAAGA+TGG 0.479585 tig0027109:-42338 Msa1432520:three_prime_UTR
TCATGCTTTGGACGACTGAA+TGG 0.481298 tig0027109:+42799 None:intergenic
AAAGAATAGCAATGGAGGAA+AGG 0.482688 tig0027109:-41936 Msa1432520:three_prime_UTR
GGAGTAGATACAAATTTAGC+TGG 0.483928 tig0027109:+42284 None:intergenic
GAATCATGTTAAAGAGCTTA+GGG 0.484737 tig0027109:+41863 None:intergenic
CTGAGAAAACCGCCTTCTGA+AGG 0.492237 tig0027109:+42588 None:intergenic
AACCAACTTGTCCGGCGAGC+TGG 0.493098 tig0027109:+42187 None:intergenic
TGTACAAGAGGATCATGCTT+TGG 0.499528 tig0027109:+42787 None:intergenic
TTTATACTAACATGAAGATC+CGG 0.500484 tig0027109:+43480 None:intergenic
CCGCGGTTGCGGGTTCGCAT+CGG 0.503017 tig0027109:+44147 None:intergenic
TTAAGCGCCCACCTCGTTCA+AGG 0.503396 tig0027109:-42166 Msa1432520:three_prime_UTR
GATTGCTATTAAGAAGTTGT+TGG 0.505832 tig0027109:-43532 Msa1432520:CDS
TTCTTAGCTTGTGAGATAGC+TGG 0.511965 tig0027109:+41910 None:intergenic
CTAAGTTGTTGTCTGAATCT+GGG 0.523632 tig0027109:-43434 Msa1432520:CDS
GTTGCAGGTATGAGAATTTG+GGG 0.525927 tig0027109:-43802 Msa1432520:intron
TTCTTAATAGCAATCGCCTC+AGG 0.526378 tig0027109:+43540 None:intergenic
AATGAAATGACGTCGTTGAA+GGG 0.529956 tig0027109:-44057 Msa1432520:CDS
AAAAGAAAGAATAGCAATGG+AGG 0.531135 tig0027109:-41941 Msa1432520:three_prime_UTR
AGGTGTAGCTAGTGTAACTC+TGG 0.532203 tig0027109:+42373 None:intergenic
AATCCATGCTTACTGACTGC+TGG 0.534347 tig0027109:-41197 Msa1432520:three_prime_UTR
GCTTCAACTGATGTCTCAGC+AGG 0.536091 tig0027109:+42652 None:intergenic
CCGTTCTGTTATCACAAAAG+AGG 0.537384 tig0027109:-41818 Msa1432520:three_prime_UTR
TTTGGATCTGGTGTTGTGTG+AGG 0.537780 tig0027109:+44260 None:intergenic
TGAAGAAGCAAAATGAGTAA+AGG 0.538290 tig0027109:-41444 Msa1432520:three_prime_UTR
ATTCTGTAACCAACTCGGAT+GGG 0.538377 tig0027109:+42453 None:intergenic
TTATTAGGGTTTAATAGCGC+GGG 0.539220 tig0027109:+44387 None:intergenic
TCCCGAATGGATTTCTGAGA+AGG 0.541497 tig0027109:-41631 Msa1432520:three_prime_UTR
GAAATTAATTAAGAATGGAC+CGG 0.542580 tig0027109:-41241 Msa1432520:three_prime_UTR
TTTGGACGACTGAATGGCTC+AGG 0.542814 tig0027109:+42805 None:intergenic
TCAACTGTGCCAAATGAGCA+TGG 0.543850 tig0027109:+43574 None:intergenic
GGGCGCTTAACCAACTTGTC+CGG 0.545875 tig0027109:+42179 None:intergenic
CGAGACTAGCATATCTCCAC+TGG 0.546554 tig0027109:+41602 None:intergenic
TACCAGCTCGCCGGACAAGT+TGG 0.547251 tig0027109:-42189 Msa1432520:three_prime_UTR
GGATATTAGAAAAGTTGCTA+AGG 0.548634 tig0027109:-44106 Msa1432520:CDS
GATGATTCATTGCTCTTCCG+AGG 0.549354 tig0027109:+44000 None:intergenic
TAAAATATCCCCATCCGAGT+TGG 0.552390 tig0027109:-42462 Msa1432520:three_prime_UTR
CGGTTGCGGGTTCGCATCGG+TGG 0.552701 tig0027109:+44150 None:intergenic
CCGAATGGAGAAGATTATCC+GGG 0.552846 tig0027109:+42063 None:intergenic
TTCATATCCATGTAAAACAA+AGG 0.559207 tig0027109:-41162 Msa1432520:three_prime_UTR
GGCATAAGAGAGGCAACTGC+CGG 0.559596 tig0027109:+42616 None:intergenic
GATTCTGTAACCAACTCGGA+TGG 0.559752 tig0027109:+42452 None:intergenic
TAACCAGCAGTCAGTAAGCA+TGG 0.562965 tig0027109:+41194 None:intergenic
TGCCTCAATCCTTCAGAAGG+CGG 0.563769 tig0027109:-42597 Msa1432520:CDS
TGTTAGAATTAGTTCCCGAA+TGG 0.564240 tig0027109:-41644 Msa1432520:three_prime_UTR
GGTGAATGTAAGAGAAATTG+GGG 0.565693 tig0027109:+44353 None:intergenic
TTCTGTAACCAACTCGGATG+GGG 0.565800 tig0027109:+42454 None:intergenic
AGAAGCAAAATGAGTAAAGG+AGG 0.566110 tig0027109:-41441 Msa1432520:three_prime_UTR
TCAATGACCTTGAACGAGGT+GGG 0.568176 tig0027109:+42159 None:intergenic
TCTGAAGAACCATGAATCGC+AGG 0.570831 tig0027109:+42410 None:intergenic
AAACAGGCACAACTGAGGGT+TGG 0.574849 tig0027109:+42525 None:intergenic
TACTTTCATATATTTAGGAG+AGG 0.575305 tig0027109:-41327 Msa1432520:three_prime_UTR
TTCAATGACCTTGAACGAGG+TGG 0.577604 tig0027109:+42158 None:intergenic
AAATCACATTGGCTTCTCCT+CGG 0.580298 tig0027109:-44017 Msa1432520:CDS
TCTGAGAAGGCGGCCTCCAG+TGG 0.580751 tig0027109:-41618 Msa1432520:three_prime_UTR
TGAAGCTCTTAACCAGAAGC+CGG 0.583837 tig0027109:-42635 Msa1432520:CDS
AACCGCCTTCTGAAGGATTG+AGG 0.583856 tig0027109:+42595 None:intergenic
TCTGAAACAGGCACAACTGA+GGG 0.587099 tig0027109:+42521 None:intergenic
GATATTAGAAAAGTTGCTAA+GGG 0.589889 tig0027109:-44105 Msa1432520:CDS
TTATGCCTCAATCCTTCAGA+AGG 0.598089 tig0027109:-42600 Msa1432520:CDS
CGACAACTCTACCAGCTCGC+CGG 0.599025 tig0027109:-42198 Msa1432520:three_prime_UTR
AATTTGTATCTACTCCAGCC+AGG 0.603332 tig0027109:-42277 Msa1432520:three_prime_UTR
CTATCTCACAAGCTAAGAAG+CGG 0.603356 tig0027109:-41906 Msa1432520:three_prime_UTR
TGCTAGAAGGCAAATCACAT+TGG 0.603766 tig0027109:-44028 Msa1432520:CDS
CATGACTTTCTGAGTTAGCA+GGG 0.605336 tig0027109:+42683 None:intergenic
TGGAGTTGACATAGCATCAA+CGG 0.606325 tig0027109:+42304 None:intergenic
AGTATACAGAAAGCAAAGAT+GGG 0.606980 tig0027109:-42337 Msa1432520:three_prime_UTR
AGGTGTAGCTGACATCAGCC+TGG 0.607269 tig0027109:+42259 None:intergenic
TTTATTAGGGTTTAATAGCG+CGG 0.607539 tig0027109:+44386 None:intergenic
GGTTTCATCATGTGTACAAG+AGG 0.610647 tig0027109:+42775 None:intergenic
CATCAAACTCAACTGCATCA+GGG 0.610741 tig0027109:+43457 None:intergenic
ACACTATCATACCTCTGGGT+GGG 0.612575 tig0027109:+43359 None:intergenic
CAACTGTGCCAAATGAGCAT+GGG 0.612717 tig0027109:+43575 None:intergenic
GCGAACGAGTTGTATGAAGC+CGG 0.612998 tig0027109:-43499 Msa1432520:CDS
CTCTGAAACAGGCACAACTG+AGG 0.615353 tig0027109:+42520 None:intergenic
TTCACTGCAGAGAATGATGA+GGG 0.616272 tig0027109:+42751 None:intergenic
CCGATGCGAACCCGCAACCG+CGG 0.620178 tig0027109:-44147 Msa1432520:CDS
CGAATGGATTTCTGAGAAGG+CGG 0.621345 tig0027109:-41628 Msa1432520:three_prime_UTR
TACTTCTATCAACAATATCA+CGG 0.628510 tig0027109:+41767 None:intergenic
TTTCACTGCAGAGAATGATG+AGG 0.630337 tig0027109:+42750 None:intergenic
CACACTATCATACCTCTGGG+TGG 0.639190 tig0027109:+43358 None:intergenic
GTAGCTAGTGTAACTCTGGA+TGG 0.641322 tig0027109:+42377 None:intergenic
GCTGGTAGAGTTGTCGTCTG+GGG 0.645341 tig0027109:+42205 None:intergenic
GGATGATTCTGTAACCAACT+CGG 0.651764 tig0027109:+42448 None:intergenic
CTGTTTCAGAGTCAAGCTTG+AGG 0.653446 tig0027109:-42508 Msa1432520:exon
AATTTCAATGACCTTGAACG+AGG 0.653533 tig0027109:+42155 None:intergenic
TTGCAGGTATGAGAATTTGG+GGG 0.655048 tig0027109:-43801 Msa1432520:intron
GACTAGCATATCTCCACTGG+AGG 0.665848 tig0027109:+41605 None:intergenic
ACGTGCTTCTAGTGACATTG+CGG 0.666388 tig0027109:-42716 Msa1432520:CDS
ACTGCAGAGAATGATGAGGG+AGG 0.673341 tig0027109:+42754 None:intergenic
GAGGATAAATTCCACCTCTG+AGG 0.675454 tig0027109:-42489 Msa1432520:three_prime_UTR
AGTAGATCAAACCAACTACA+CGG 0.677064 tig0027109:+41346 None:intergenic
AATCTGGGACTATGTCTCTG+AGG 0.683217 tig0027109:-43419 Msa1432520:CDS
ATAGGCTGATGAAGTTCCAG+AGG 0.688686 tig0027109:-42836 Msa1432520:intron
GTGTTGTGTGAGGATTGTGA+AGG 0.688886 tig0027109:+44270 None:intergenic
TTGGATGAATCAGATTGAAG+TGG 0.689591 tig0027109:+42544 None:intergenic
ATATCGAAAGCGCAACGCCG+CGG 0.697463 tig0027109:+44130 None:intergenic
GAAGGATTGAGGCATAAGAG+AGG 0.703019 tig0027109:+42606 None:intergenic
AATGGAGAAGATTATCCGGG+AGG 0.714359 tig0027109:+42066 None:intergenic
TCATGTTAAAGAGCTTAGGG+AGG 0.717982 tig0027109:+41866 None:intergenic
TTCTATCAACAATATCACGG+TGG 0.721589 tig0027109:+41770 None:intergenic
GTGAATGTAAGAGAAATTGG+GGG 0.824620 tig0027109:+44354 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTGTTGATTTATTTTA+TGG - tig0027109:41704-41723 Msa1432520:intron 10.0%
!!! TTTTTGTTGATTTATTTTAT+GGG - tig0027109:41705-41724 Msa1432520:intron 10.0%
!!! TTTTTCAAAAATTTGTATTT+AGG - tig0027109:41895-41914 Msa1432520:three_prime_UTR 10.0%
!! AATAATATGCAATTTCTAAA+AGG + tig0027109:42659-42678 None:intergenic 15.0%
!! TCACTCATAAAAATAAATAA+AGG + tig0027109:43541-43560 None:intergenic 15.0%
!!! AGTATATTGTTTTTTTCTTT+TGG - tig0027109:44131-44150 Msa1432520:CDS 15.0%
!!! GTATATTGTTTTTTTCTTTT+GGG - tig0027109:44132-44151 Msa1432520:CDS 15.0%
!!! ATTTTGAATTTTCAGATCTA+GGG - tig0027109:41582-41601 Msa1432520:intron 20.0%
!!! TTTTTATGATTTGTTTGATG+TGG - tig0027109:41624-41643 Msa1432520:three_prime_UTR 20.0%
!!! TCTTAAGCATTTTGAAATTT+TGG - tig0027109:41657-41676 Msa1432520:three_prime_UTR 20.0%
!!! TAGTTTTGCATTTTATTTGT+GGG - tig0027109:42308-42327 Msa1432520:three_prime_UTR 20.0%
!!! TAAATGATGCTTTTATGTAT+AGG - tig0027109:42684-42703 Msa1432520:CDS 20.0%
!! ATATAATCAATACAATGACA+GGG + tig0027109:44013-44032 None:intergenic 20.0%
!! AATATAATCAATACAATGAC+AGG + tig0027109:44014-44033 None:intergenic 20.0%
!! TGATCTACTTTCATATATTT+AGG - tig0027109:44206-44225 Msa1432520:CDS 20.0%
!! ACCATGAAATTAATTAAGAA+TGG - tig0027109:44292-44311 Msa1432520:CDS 20.0%
!! TCCATTCTTAATTAATTTCA+TGG + tig0027109:44296-44315 None:intergenic 20.0%
! GATATTAGAAAAGTTGCTAA+GGG - tig0027109:41433-41452 Msa1432520:three_prime_UTR 25.0%
!!! ATTCAAAATGCTTACTTTTC+AGG + tig0027109:41571-41590 None:intergenic 25.0%
!! CATTTTGAATTTTCAGATCT+AGG - tig0027109:41581-41600 Msa1432520:intron 25.0%
!!! CATTTTGAAATTTTGGATCT+AGG - tig0027109:41664-41683 Msa1432520:three_prime_UTR 25.0%
!! AAATTTTGGATCTAGGTTTT+TGG - tig0027109:41671-41690 Msa1432520:three_prime_UTR 25.0%
! ATTAGATTGTTGCGATTAAA+AGG - tig0027109:41786-41805 Msa1432520:three_prime_UTR 25.0%
! TCAGTTAAAGTTTCAATCTT+TGG + tig0027109:41840-41859 None:intergenic 25.0%
! AGATTGAAACTTTAACTGAT+AGG - tig0027109:41841-41860 Msa1432520:three_prime_UTR 25.0%
!!! TAGGATTTTTTTTCTGATTG+TGG - tig0027109:41914-41933 Msa1432520:three_prime_UTR 25.0%
!!! TTTTTTTCTGATTGTGGTTT+TGG - tig0027109:41920-41939 Msa1432520:three_prime_UTR 25.0%
! TTTATACTAACATGAAGATC+CGG + tig0027109:42061-42080 None:intergenic 25.0%
!! TTGATATTTCATTTTGCTTG+TGG - tig0027109:42258-42277 Msa1432520:three_prime_UTR 25.0%
!!! CTAGTTTTGCATTTTATTTG+TGG - tig0027109:42307-42326 Msa1432520:three_prime_UTR 25.0%
! TATCCACTTATTATGTTGAT+TGG - tig0027109:42346-42365 Msa1432520:three_prime_UTR 25.0%
! AAACCAATCAACATAATAAG+TGG + tig0027109:42352-42371 None:intergenic 25.0%
!! ACTTATTATGTTGATTGGTT+TGG - tig0027109:42351-42370 Msa1432520:three_prime_UTR 25.0%
! TAATGCTAATTCTGAGTAAA+AGG - tig0027109:42503-42522 Msa1432520:exon 25.0%
! TGAAAGTAACTTAAAGTCTA+AGG - tig0027109:42563-42582 Msa1432520:CDS 25.0%
!!! GCATCATTTTCATTTTTCAT+AGG + tig0027109:43416-43435 None:intergenic 25.0%
! ATGAAAAATGAAAATGATGC+TGG - tig0027109:43416-43435 Msa1432520:CDS 25.0%
! TACTTCTATCAACAATATCA+CGG + tig0027109:43774-43793 None:intergenic 25.0%
! TCTCTATGAAACATAATTGA+CGG - tig0027109:43801-43820 Msa1432520:intron 25.0%
! TGGAATTGTAAATTCATAAC+AGG + tig0027109:43986-44005 None:intergenic 25.0%
! TACTTTCATATATTTAGGAG+AGG - tig0027109:44211-44230 Msa1432520:CDS 25.0%
! ATATTTAGGAGAGGTAAAAT+TGG - tig0027109:44220-44239 Msa1432520:CDS 25.0%
!! GTAGATCAACTCATATTTTT+GGG - tig0027109:44242-44261 Msa1432520:CDS 25.0%
! GAAATTAATTAAGAATGGAC+CGG - tig0027109:44297-44316 Msa1432520:exon 25.0%
!! TGTTTTACATGGATATGAAA+AGG + tig0027109:44375-44394 None:intergenic 25.0%
! TTCATATCCATGTAAAACAA+AGG - tig0027109:44376-44395 Msa1432520:five_prime_UTR 25.0%
!!! CTATTTTCCTTTGTTTTACA+TGG + tig0027109:44386-44405 None:intergenic 25.0%
TTTATTAGGGTTTAATAGCG+CGG + tig0027109:41155-41174 None:intergenic 30.0%
!! GGGGTGGATTTTATTTATTA+GGG + tig0027109:41168-41187 None:intergenic 30.0%
! GAGTGAAGAAGAAGAATTTT+GGG + tig0027109:41209-41228 None:intergenic 30.0%
! TGAGTGAAGAAGAAGAATTT+TGG + tig0027109:41210-41229 None:intergenic 30.0%
! TGAAGAAGTTTTCATGGTTA+TGG + tig0027109:41242-41261 None:intergenic 30.0%
!! AGTTTCTGAAGAAGTTTTCA+TGG + tig0027109:41248-41267 None:intergenic 30.0%
!!! GTTTTTGAGGTTAGTTCAAT+TGG + tig0027109:41343-41362 None:intergenic 30.0%
GGATATTAGAAAAGTTGCTA+AGG - tig0027109:41432-41451 Msa1432520:three_prime_UTR 30.0%
!! ATTTTCAGATCTAGGGTTTT+TGG - tig0027109:41589-41608 Msa1432520:intron 30.0%
!!! TTATGGGTTTTTTTTGTTGC+AGG - tig0027109:41721-41740 Msa1432520:intron 30.0%
!!! GTTGAAGTTTATTTTACCTG+AGG - tig0027109:41982-42001 Msa1432520:intron 30.0%
! GATTGCTATTAAGAAGTTGT+TGG - tig0027109:42006-42025 Msa1432520:intron 30.0%
! TTGTCACTATGAGATTTTGA+TGG - tig0027109:42438-42457 Msa1432520:three_prime_UTR 30.0%
!!! TAACTTTTGATGATGAGTTG+AGG - tig0027109:42610-42629 Msa1432520:CDS 30.0%
TTTGCTTTCTGTATACTCAA+TGG + tig0027109:43198-43217 None:intergenic 30.0%
AGTATACAGAAAGCAAAGAT+GGG - tig0027109:43201-43220 Msa1432520:intron 30.0%
! GTCATAAAACTTCTTTTAGG+TGG + tig0027109:43314-43333 None:intergenic 30.0%
AAAAATGAAAATGATGCTGG+CGG - tig0027109:43419-43438 Msa1432520:CDS 30.0%
GGAAAAAGAAAGAATAGCAA+TGG - tig0027109:43594-43613 Msa1432520:intron 30.0%
AAAAGAAAGAATAGCAATGG+AGG - tig0027109:43597-43616 Msa1432520:intron 30.0%
GAATCATGTTAAAGAGCTTA+GGG + tig0027109:43678-43697 None:intergenic 30.0%
TGAATCATGTTAAAGAGCTT+AGG + tig0027109:43679-43698 None:intergenic 30.0%
CTCTATGAAACATAATTGAC+GGG - tig0027109:43802-43821 Msa1432520:intron 30.0%
!!! TACTAAACCCTTGTTTTCTT+AGG - tig0027109:43845-43864 Msa1432520:intron 30.0%
AACTTCACCTAAGAAAACAA+GGG + tig0027109:43855-43874 None:intergenic 30.0%
TGAAGAAGCAAAATGAGTAA+AGG - tig0027109:44094-44113 Msa1432520:CDS 30.0%
! GGTAGATCAACTCATATTTT+TGG - tig0027109:44241-44260 Msa1432520:CDS 30.0%
!!! AACTCATATTTTTGGGCAAA+TGG - tig0027109:44249-44268 Msa1432520:CDS 30.0%
!! GGGGGTGGATTTTATTTATT+AGG + tig0027109:41169-41188 None:intergenic 35.0%
GTGAATGTAAGAGAAATTGG+GGG + tig0027109:41187-41206 None:intergenic 35.0%
GGTGAATGTAAGAGAAATTG+GGG + tig0027109:41188-41207 None:intergenic 35.0%
GGGTGAATGTAAGAGAAATT+GGG + tig0027109:41189-41208 None:intergenic 35.0%
TGGGTGAATGTAAGAGAAAT+TGG + tig0027109:41190-41209 None:intergenic 35.0%
!!! AAGATTGGGTTTTTTGGATC+TGG + tig0027109:41293-41312 None:intergenic 35.0%
! GATTTTGAGCTACGAAGATT+GGG + tig0027109:41307-41326 None:intergenic 35.0%
! AGATTTTGAGCTACGAAGAT+TGG + tig0027109:41308-41327 None:intergenic 35.0%
!!! TGATTTTTCTGGGGTTTTTG+AGG + tig0027109:41356-41375 None:intergenic 35.0%
AAAAACCCCAGAAAAATCAC+TGG - tig0027109:41357-41376 Msa1432520:three_prime_UTR 35.0%
AATGAAATGACGTCGTTGAA+GGG - tig0027109:41481-41500 Msa1432520:three_prime_UTR 35.0%
TTGTTGCAGGTATGAGAATT+TGG - tig0027109:41734-41753 Msa1432520:intron 35.0%
TGTTGCAGGTATGAGAATTT+GGG - tig0027109:41735-41754 Msa1432520:intron 35.0%
!!! GTGGTTTTGGATGAGTTTTT+AGG - tig0027109:41933-41952 Msa1432520:three_prime_UTR 35.0%
!! GTTTTGGATGAGTTTTTAGG+AGG - tig0027109:41936-41955 Msa1432520:three_prime_UTR 35.0%
CTAAGTTGTTGTCTGAATCT+GGG - tig0027109:42104-42123 Msa1432520:three_prime_UTR 35.0%
GTTTGGTAGAAAGAATAGTC+AGG - tig0027109:42368-42387 Msa1432520:three_prime_UTR 35.0%
! GCGGTTTTCTCAGAAATTAA+AGG - tig0027109:42960-42979 Msa1432520:intron 35.0%
TTGGATGAATCAGATTGAAG+TGG + tig0027109:42997-43016 None:intergenic 35.0%
!! GTATACTCAATGGTTTTGCT+AGG + tig0027109:43188-43207 None:intergenic 35.0%
GAGTATACAGAAAGCAAAGA+TGG - tig0027109:43200-43219 Msa1432520:intron 35.0%
GGAGTAGATACAAATTTAGC+TGG + tig0027109:43257-43276 None:intergenic 35.0%
! GGGGTCATAAAACTTCTTTT+AGG + tig0027109:43317-43336 None:intergenic 35.0%
AATTTCAATGACCTTGAACG+AGG + tig0027109:43386-43405 None:intergenic 35.0%
! TGACATTTTTGATATCCTCC+CGG - tig0027109:43457-43476 Msa1432520:CDS 35.0%
! AAACAAAAGAGCATACCGAA+TGG + tig0027109:43493-43512 None:intergenic 35.0%
AAAGAATAGCAATGGAGGAA+AGG - tig0027109:43602-43621 Msa1432520:intron 35.0%
AAGAATAGCAATGGAGGAAA+GGG - tig0027109:43603-43622 Msa1432520:intron 35.0%
! CCTCTTTTGTGATAACAGAA+CGG + tig0027109:43723-43742 None:intergenic 35.0%
TTCTATCAACAATATCACGG+TGG + tig0027109:43771-43790 None:intergenic 35.0%
CAACTTCACCTAAGAAAACA+AGG + tig0027109:43856-43875 None:intergenic 35.0%
TGTTAGAATTAGTTCCCGAA+TGG - tig0027109:43894-43913 Msa1432520:intron 35.0%
TTCTTCAAGTGATGCTCTTA+AGG + tig0027109:44081-44100 None:intergenic 35.0%
AGAAGCAAAATGAGTAAAGG+AGG - tig0027109:44097-44116 Msa1432520:CDS 35.0%
AGTAGATCAAACCAACTACA+CGG + tig0027109:44195-44214 None:intergenic 35.0%
TCTGCAACAAGAAACATTTC+CGG + tig0027109:44319-44338 None:intergenic 35.0%
AATGTAAGAGAAATTGGGGG+TGG + tig0027109:41184-41203 None:intergenic 40.0%
!!! GCTACGAAGATTGGGTTTTT+TGG + tig0027109:41299-41318 None:intergenic 40.0%
! CTTCTCCAGTGATTTTTCTG+GGG + tig0027109:41365-41384 None:intergenic 40.0%
! GCTTCTCCAGTGATTTTTCT+GGG + tig0027109:41366-41385 None:intergenic 40.0%
CAATGAAATGACGTCGTTGA+AGG - tig0027109:41480-41499 Msa1432520:three_prime_UTR 40.0%
TGAAGGGAAAATCTGCTAGA+AGG - tig0027109:41497-41516 Msa1432520:intron 40.0%
TGCTAGAAGGCAAATCACAT+TGG - tig0027109:41510-41529 Msa1432520:intron 40.0%
!! AAATCACATTGGCTTCTCCT+CGG - tig0027109:41521-41540 Msa1432520:intron 40.0%
GTTGCAGGTATGAGAATTTG+GGG - tig0027109:41736-41755 Msa1432520:intron 40.0%
TTGCAGGTATGAGAATTTGG+GGG - tig0027109:41737-41756 Msa1432520:intron 40.0%
TTCTTAATAGCAATCGCCTC+AGG + tig0027109:42001-42020 None:intergenic 40.0%
CATCAAACTCAACTGCATCA+GGG + tig0027109:42084-42103 None:intergenic 40.0%
GCTAAGTTGTTGTCTGAATC+TGG - tig0027109:42103-42122 Msa1432520:three_prime_UTR 40.0%
ATGCACACTATCATACCTCT+GGG + tig0027109:42186-42205 None:intergenic 40.0%
GTAGAAAGAATAGTCAGGTG+TGG - tig0027109:42373-42392 Msa1432520:three_prime_UTR 40.0%
AAAGAATAGTCAGGTGTGGT+GGG - tig0027109:42377-42396 Msa1432520:three_prime_UTR 40.0%
TGTACAAGAGGATCATGCTT+TGG + tig0027109:42754-42773 None:intergenic 40.0%
GGTTTCATCATGTGTACAAG+AGG + tig0027109:42766-42785 None:intergenic 40.0%
TTCACTGCAGAGAATGATGA+GGG + tig0027109:42790-42809 None:intergenic 40.0%
TTTCACTGCAGAGAATGATG+AGG + tig0027109:42791-42810 None:intergenic 40.0%
CATGACTTTCTGAGTTAGCA+GGG + tig0027109:42858-42877 None:intergenic 40.0%
ACATGACTTTCTGAGTTAGC+AGG + tig0027109:42859-42878 None:intergenic 40.0%
TTATGCCTCAATCCTTCAGA+AGG - tig0027109:42938-42957 Msa1432520:intron 40.0%
! ACTCGGATGGGGATATTTTA+GGG + tig0027109:43076-43095 None:intergenic 40.0%
! AACTCGGATGGGGATATTTT+AGG + tig0027109:43077-43096 None:intergenic 40.0%
TAAAATATCCCCATCCGAGT+TGG - tig0027109:43076-43095 Msa1432520:intron 40.0%
ATTCTGTAACCAACTCGGAT+GGG + tig0027109:43088-43107 None:intergenic 40.0%
GGATGATTCTGTAACCAACT+CGG + tig0027109:43093-43112 None:intergenic 40.0%
!! CATAGCATCAACGGTTTTGA+AGG + tig0027109:43228-43247 None:intergenic 40.0%
TGGAGTTGACATAGCATCAA+CGG + tig0027109:43237-43256 None:intergenic 40.0%
AATTTGTATCTACTCCAGCC+AGG - tig0027109:43261-43280 Msa1432520:intron 40.0%
ACCGAATGGAGAAGATTATC+CGG + tig0027109:43479-43498 None:intergenic 40.0%
! CTTTTTCCTGAATCTGCAGA+AGG + tig0027109:43582-43601 None:intergenic 40.0%
!! TTCTTAGCTTGTGAGATAGC+TGG + tig0027109:43631-43650 None:intergenic 40.0%
CTATCTCACAAGCTAAGAAG+CGG - tig0027109:43632-43651 Msa1432520:intron 40.0%
TCATGTTAAAGAGCTTAGGG+AGG + tig0027109:43675-43694 None:intergenic 40.0%
CCGTTCTGTTATCACAAAAG+AGG - tig0027109:43720-43739 Msa1432520:CDS 40.0%
CAATACAATGACAGGGTTGT+TGG + tig0027109:44006-44025 None:intergenic 40.0%
GTGATGCTCTTAAGGATTCA+GGG + tig0027109:44073-44092 None:intergenic 40.0%
AGTGATGCTCTTAAGGATTC+AGG + tig0027109:44074-44093 None:intergenic 40.0%
! CTTTTGACATTCCGTGTAGT+TGG - tig0027109:44181-44200 Msa1432520:CDS 40.0%
GTGTTGTGTGAGGATTGTGA+AGG + tig0027109:41271-41290 None:intergenic 45.0%
!! TTTGGATCTGGTGTTGTGTG+AGG + tig0027109:41281-41300 None:intergenic 45.0%
! GGCTTCTCCAGTGATTTTTC+TGG + tig0027109:41367-41386 None:intergenic 45.0%
GATGATTCATTGCTCTTCCG+AGG + tig0027109:41541-41560 None:intergenic 45.0%
!!! GGGGGAGTTTTTTGATAGCT+TGG - tig0027109:41755-41774 Msa1432520:intron 45.0%
GAGGTTTACCCATGCTCATT+TGG - tig0027109:41955-41974 Msa1432520:intron 45.0%
CAACTGTGCCAAATGAGCAT+GGG + tig0027109:41966-41985 None:intergenic 45.0%
TCAACTGTGCCAAATGAGCA+TGG + tig0027109:41967-41986 None:intergenic 45.0%
GCATCAAACTCAACTGCATC+AGG + tig0027109:42085-42104 None:intergenic 45.0%
! AATCTGGGACTATGTCTCTG+AGG - tig0027109:42119-42138 Msa1432520:three_prime_UTR 45.0%
ACACTATCATACCTCTGGGT+GGG + tig0027109:42182-42201 None:intergenic 45.0%
CATGCACACTATCATACCTC+TGG + tig0027109:42187-42206 None:intergenic 45.0%
GAAAGAATAGTCAGGTGTGG+TGG - tig0027109:42376-42395 Msa1432520:three_prime_UTR 45.0%
TGAGTAAAAGGCCAAGTCTG+TGG - tig0027109:42515-42534 Msa1432520:CDS 45.0%
GAGTAAAAGGCCAAGTCTGT+GGG - tig0027109:42516-42535 Msa1432520:CDS 45.0%
! AACAAAGTGTCCCACAGACT+TGG + tig0027109:42529-42548 None:intergenic 45.0%
ATAGGCTGATGAAGTTCCAG+AGG - tig0027109:42702-42721 Msa1432520:CDS 45.0%
! TCATGCTTTGGACGACTGAA+TGG + tig0027109:42742-42761 None:intergenic 45.0%
ACGTGCTTCTAGTGACATTG+CGG - tig0027109:42822-42841 Msa1432520:CDS 45.0%
TGAAGCTCTTAACCAGAAGC+CGG - tig0027109:42903-42922 Msa1432520:intron 45.0%
GAAGGATTGAGGCATAAGAG+AGG + tig0027109:42935-42954 None:intergenic 45.0%
! TCTGAAACAGGCACAACTGA+GGG + tig0027109:43020-43039 None:intergenic 45.0%
!! CTCAAGCTTGACTCTGAAAC+AGG + tig0027109:43032-43051 None:intergenic 45.0%
CTGTTTCAGAGTCAAGCTTG+AGG - tig0027109:43030-43049 Msa1432520:intron 45.0%
GAGGATAAATTCCACCTCTG+AGG - tig0027109:43049-43068 Msa1432520:intron 45.0%
!! TATTTTAGGGACCTCAGAGG+TGG + tig0027109:43063-43082 None:intergenic 45.0%
!! GGATATTTTAGGGACCTCAG+AGG + tig0027109:43066-43085 None:intergenic 45.0%
TTCTGTAACCAACTCGGATG+GGG + tig0027109:43087-43106 None:intergenic 45.0%
GATTCTGTAACCAACTCGGA+TGG + tig0027109:43089-43108 None:intergenic 45.0%
TCTGAAGAACCATGAATCGC+AGG + tig0027109:43131-43150 None:intergenic 45.0%
GTAGCTAGTGTAACTCTGGA+TGG + tig0027109:43164-43183 None:intergenic 45.0%
AGGTGTAGCTAGTGTAACTC+TGG + tig0027109:43168-43187 None:intergenic 45.0%
!! CTTTTAGGTGGCTTCAATGC+AGG + tig0027109:43302-43321 None:intergenic 45.0%
TCAATGACCTTGAACGAGGT+GGG + tig0027109:43382-43401 None:intergenic 45.0%
TTCAATGACCTTGAACGAGG+TGG + tig0027109:43383-43402 None:intergenic 45.0%
AATGGAGAAGATTATCCGGG+AGG + tig0027109:43475-43494 None:intergenic 45.0%
CCGAATGGAGAAGATTATCC+GGG + tig0027109:43478-43497 None:intergenic 45.0%
CCCGGATAATCTTCTCCATT+CGG - tig0027109:43475-43494 Msa1432520:CDS 45.0%
ACCATTCCTTCTGCAGATTC+AGG - tig0027109:43573-43592 Msa1432520:CDS 45.0%
TCCTGAATCTGCAGAAGGAA+TGG + tig0027109:43577-43596 None:intergenic 45.0%
! TCCCGAATGGATTTCTGAGA+AGG - tig0027109:43907-43926 Msa1432520:intron 45.0%
GCCTTCTCAGAAATCCATTC+GGG + tig0027109:43911-43930 None:intergenic 45.0%
CGCCTTCTCAGAAATCCATT+CGG + tig0027109:43912-43931 None:intergenic 45.0%
! CGAATGGATTTCTGAGAAGG+CGG - tig0027109:43910-43929 Msa1432520:intron 45.0%
! AATCCATGCTTACTGACTGC+TGG - tig0027109:44341-44360 Msa1432520:five_prime_UTR 45.0%
TAACCAGCAGTCAGTAAGCA+TGG + tig0027109:44347-44366 None:intergenic 45.0%
GCGAACGAGTTGTATGAAGC+CGG - tig0027109:42039-42058 Msa1432520:intron 50.0%
! GTGCGCGACTCAATGAGTTT+TGG - tig0027109:42152-42171 Msa1432520:three_prime_UTR 50.0%
!!! GTTTTGGAAATCCCACCCAG+AGG - tig0027109:42168-42187 Msa1432520:three_prime_UTR 50.0%
CACACTATCATACCTCTGGG+TGG + tig0027109:42183-42202 None:intergenic 50.0%
TTTGGACGACTGAATGGCTC+AGG + tig0027109:42736-42755 None:intergenic 50.0%
ACTGCAGAGAATGATGAGGG+AGG + tig0027109:42787-42806 None:intergenic 50.0%
GCTTCAACTGATGTCTCAGC+AGG + tig0027109:42889-42908 None:intergenic 50.0%
TGCCTCAATCCTTCAGAAGG+CGG - tig0027109:42941-42960 Msa1432520:intron 50.0%
! AACCGCCTTCTGAAGGATTG+AGG + tig0027109:42946-42965 None:intergenic 50.0%
CTGAGAAAACCGCCTTCTGA+AGG + tig0027109:42953-42972 None:intergenic 50.0%
AAACAGGCACAACTGAGGGT+TGG + tig0027109:43016-43035 None:intergenic 50.0%
!! CTCTGAAACAGGCACAACTG+AGG + tig0027109:43021-43040 None:intergenic 50.0%
GAAGCACATCCTGCGATTCA+TGG - tig0027109:43119-43138 Msa1432520:intron 50.0%
AGCTGGTAGAGTTGTCGTCT+GGG + tig0027109:43337-43356 None:intergenic 50.0%
GTTAAAGAGCTTAGGGAGGC+TGG + tig0027109:43671-43690 None:intergenic 50.0%
GACTAGCATATCTCCACTGG+AGG + tig0027109:43936-43955 None:intergenic 50.0%
CGAGACTAGCATATCTCCAC+TGG + tig0027109:43939-43958 None:intergenic 50.0%
! ATATCGAAAGCGCAACGCCG+CGG + tig0027109:41411-41430 None:intergenic 55.0%
CGGCGTTGCGCTTTCGATAT+CGG - tig0027109:41411-41430 Msa1432520:three_prime_UTR 55.0%
GGCATAAGAGAGGCAACTGC+CGG + tig0027109:42925-42944 None:intergenic 55.0%
CGCAGGATGTGCTTCACTAC+TGG + tig0027109:43114-43133 None:intergenic 55.0%
AGGTGTAGCTGACATCAGCC+TGG + tig0027109:43282-43301 None:intergenic 55.0%
GCTGGTAGAGTTGTCGTCTG+GGG + tig0027109:43336-43355 None:intergenic 55.0%
GAGCTGGTAGAGTTGTCGTC+TGG + tig0027109:43338-43357 None:intergenic 55.0%
GGGCGCTTAACCAACTTGTC+CGG + tig0027109:43362-43381 None:intergenic 55.0%
TTAAGCGCCCACCTCGTTCA+AGG - tig0027109:43372-43391 Msa1432520:CDS 55.0%
GGCTCAGGCAGCATTTCCTC+TGG + tig0027109:42721-42740 None:intergenic 60.0%
GTAGCTGACATCAGCCTGGC+TGG + tig0027109:43278-43297 None:intergenic 60.0%
CGACAACTCTACCAGCTCGC+CGG - tig0027109:43340-43359 Msa1432520:intron 60.0%
TACCAGCTCGCCGGACAAGT+TGG - tig0027109:43349-43368 Msa1432520:intron 60.0%
AACCAACTTGTCCGGCGAGC+TGG + tig0027109:43354-43373 None:intergenic 60.0%
! TTGCGGGTTCGCATCGGTGG+TGG + tig0027109:41388-41407 None:intergenic 65.0%
AAAGCGCAACGCCGCGGTTG+CGG + tig0027109:41405-41424 None:intergenic 65.0%
!! GAGAGGCAACTGCCGGCTTC+TGG + tig0027109:42918-42937 None:intergenic 65.0%
TCTGAGAAGGCGGCCTCCAG+TGG - tig0027109:43920-43939 Msa1432520:intron 65.0%
CGGTTGCGGGTTCGCATCGG+TGG + tig0027109:41391-41410 None:intergenic 70.0%
CCGCGGTTGCGGGTTCGCAT+CGG + tig0027109:41394-41413 None:intergenic 70.0%
CCGATGCGAACCCGCAACCG+CGG - tig0027109:41391-41410 Msa1432520:three_prime_UTR 70.0%
AAGCGCAACGCCGCGGTTGC+GGG + tig0027109:41404-41423 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0027109 gene 41152 44408 41152 ID=Msa1432520;Name=Msa1432520
tig0027109 mRNA 41152 44408 41152 ID=Msa1432520-mRNA-1;Parent=Msa1432520;Name=Msa1432520-mRNA-1;_AED=0.05;_eAED=0.05;_QI=95|1|1|1|1|0.85|7|1096|342
tig0027109 exon 41152 41508 41152 ID=Msa1432520-mRNA-1:exon:8150;Parent=Msa1432520-mRNA-1
tig0027109 exon 41603 41693 41603 ID=Msa1432520-mRNA-1:exon:8149;Parent=Msa1432520-mRNA-1
tig0027109 exon 41770 41971 41770 ID=Msa1432520-mRNA-1:exon:8148;Parent=Msa1432520-mRNA-1
tig0027109 exon 42064 42854 42064 ID=Msa1432520-mRNA-1:exon:8147;Parent=Msa1432520-mRNA-1
tig0027109 exon 43371 43605 43371 ID=Msa1432520-mRNA-1:exon:8146;Parent=Msa1432520-mRNA-1
tig0027109 exon 43698 43817 43698 ID=Msa1432520-mRNA-1:exon:8145;Parent=Msa1432520-mRNA-1
tig0027109 exon 43985 44408 43985 ID=Msa1432520-mRNA-1:exon:8144;Parent=Msa1432520-mRNA-1
tig0027109 five_prime_UTR 44314 44408 44314 ID=Msa1432520-mRNA-1:five_prime_utr;Parent=Msa1432520-mRNA-1
tig0027109 CDS 43985 44313 43985 ID=Msa1432520-mRNA-1:cds;Parent=Msa1432520-mRNA-1
tig0027109 CDS 43698 43817 43698 ID=Msa1432520-mRNA-1:cds;Parent=Msa1432520-mRNA-1
tig0027109 CDS 43371 43605 43371 ID=Msa1432520-mRNA-1:cds;Parent=Msa1432520-mRNA-1
tig0027109 CDS 42510 42854 42510 ID=Msa1432520-mRNA-1:cds;Parent=Msa1432520-mRNA-1
tig0027109 three_prime_UTR 42064 42509 42064 ID=Msa1432520-mRNA-1:three_prime_utr;Parent=Msa1432520-mRNA-1
tig0027109 three_prime_UTR 41770 41971 41770 ID=Msa1432520-mRNA-1:three_prime_utr;Parent=Msa1432520-mRNA-1
tig0027109 three_prime_UTR 41603 41693 41603 ID=Msa1432520-mRNA-1:three_prime_utr;Parent=Msa1432520-mRNA-1
tig0027109 three_prime_UTR 41152 41508 41152 ID=Msa1432520-mRNA-1:three_prime_utr;Parent=Msa1432520-mRNA-1
Gene Sequence

>Msa1432520

ATGAAAACTTCTTCAGAAACTCCTTCACAATCCTCACACAACACCAGATCCAAAAAACCCAATCTTCGTAGCTCAAAATCTTTATTCAAAGATCCAATTGAACTAACCTCAAAAACCCCAGAAAAATCACTGGAGAAGCCACCACCGATGCGAACCCGCAACCGCGGCGTTGCGCTTTCGATATCGGATATTAGAAAAGTTGCTAAGGGTCTTCAAGATCAGAAAAAACAAAGCAATGAAATGACGTCGTTGAAGGGAAAATCTGCTAGAAGGCAAATCACATTGGCTTCTCCTCGGAAGAGCAATGAATCATCTAATCTTCCTGAAAAGTATGAGAATTTGGGGGAGTTTTTTGATAGCTTGGATAGTTCGATTAGATTGTTGCGATTAAAAGGATCGATGACGTCGTTTAATAATATCAGACCAAAGATTGAAACTTTAACTGATAGGAGGTTTACCCATGCTCATTTGGCACAGTTGAAGTTTATTTTACCTGAGGCGATTGCTATTAAGAAGTTGTTGGTGTTCGATGAGCGAACGAGTTGTATGAAGCCGGATCTTCATGTTAGTATAAACCCTGATGCAGTTGAGTTTGATGCTAAGTTGTTGTCTGAATCTGGGACTATGTCTCTGAGGAAGTTGTTTCGTGCGCGACTCAATGAGTTTTGGAAATCCCACCCAGAGGCTGATGAAGTTCCAGAGGAAATGCTGCCTGAGCCATTCAGTCGTCCAAAGCATGATCCTCTTGTACACATGATGAAACCTCCCTCATCATTCTCTGCAGTGAAATTATCTGTTGCACGTGCTTCTAGTGACATTGCGGATAATACAGACCCTGCTAACTCAGAAAGTCATGTGTCAGTGCCTGCTGAGACATCAGTTGAAGCTCTTAACCAGAAGCCGGCAGTTGCCTCTCTTATGCCTCAATCCTTCAGAAGGCGGTTTTCTCAGAAATTAAAGGAAAATGTACAGCCACTTCAATCTGATTCATCCAACCCTCAGTTGTGCCTGTTTCAGAGTCAAGCTTGA

Protein sequence

>Msa1432520

MKTSSETPSQSSHNTRSKKPNLRSSKSLFKDPIELTSKTPEKSLEKPPPMRTRNRGVALSISDIRKVAKGLQDQKKQSNEMTSLKGKSARRQITLASPRKSNESSNLPEKYENLGEFFDSLDSSIRLLRLKGSMTSFNNIRPKIETLTDRRFTHAHLAQLKFILPEAIAIKKLLVFDERTSCMKPDLHVSINPDAVEFDAKLLSESGTMSLRKLFRARLNEFWKSHPEADEVPEEMLPEPFSRPKHDPLVHMMKPPSSFSAVKLSVARASSDIADNTDPANSESHVSVPAETSVEALNQKPAVASLMPQSFRRRFSQKLKENVQPLQSDSSNPQLCLFQSQA*