Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1343980 | XP_013461511.2 | 96.651 | 209 | 7 | 0 | 1 | 209 | 1 | 209 | 1.54e-144 | 411 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1343980 | sp|A0A2U7XUE3|CHIL2_HUMLU | 70.335 | 209 | 62 | 0 | 1 | 209 | 1 | 209 | 6.48e-97 | 283 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1343980 | I3S971 | 96.651 | 209 | 7 | 0 | 1 | 209 | 1 | 209 | 7.35e-145 | 411 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006480 | Msa1343980 | 0.821748 | 3.423942e-53 | -8.615850e-47 |
| Msa0025570 | Msa1343980 | 0.802728 | 4.888692e-49 | -8.615850e-47 |
| Msa0072440 | Msa1343980 | 0.815806 | 7.655814e-52 | -8.615850e-47 |
| Msa0073110 | Msa1343980 | 0.802228 | 6.197750e-49 | -8.615850e-47 |
| Msa0100540 | Msa1343980 | 0.816241 | 6.119181e-52 | -8.615850e-47 |
| Msa0101530 | Msa1343980 | 0.803439 | 3.484196e-49 | -8.615850e-47 |
| Msa0111780 | Msa1343980 | 0.808490 | 3.018590e-50 | -8.615850e-47 |
| Msa0603310 | Msa1343980 | 0.811106 | 8.262876e-51 | -8.615850e-47 |
| Msa0628200 | Msa1343980 | 0.800240 | 1.581349e-48 | -8.615850e-47 |
| Msa0637700 | Msa1343980 | 0.819285 | 1.258631e-52 | -8.615850e-47 |
| Msa0644340 | Msa1343980 | 0.800010 | 1.761554e-48 | -8.615850e-47 |
| Msa0686830 | Msa1343980 | 0.801574 | 8.442893e-49 | -8.615850e-47 |
| Msa0731580 | Msa1343980 | 0.810684 | 1.020044e-50 | -8.615850e-47 |
| Msa0744710 | Msa1343980 | 0.822783 | 1.968815e-53 | -8.615850e-47 |
| Msa0809920 | Msa1343980 | 0.804477 | 2.120568e-49 | -8.615850e-47 |
| Msa0826240 | Msa1343980 | 0.821433 | 4.047349e-53 | -8.615850e-47 |
| Msa0830930 | Msa1343980 | 0.812452 | 4.210291e-51 | -8.615850e-47 |
| Msa0120860 | Msa1343980 | 0.825428 | 4.713281e-54 | -8.615850e-47 |
| Msa0145050 | Msa1343980 | 0.828578 | 8.317517e-55 | -8.615850e-47 |
| Msa0185040 | Msa1343980 | 0.801099 | 1.056454e-48 | -8.615850e-47 |
| Msa0197170 | Msa1343980 | 0.807879 | 4.074539e-50 | -8.615850e-47 |
| Msa1254870 | Msa1343980 | 0.802867 | 4.575474e-49 | -8.615850e-47 |
| Msa1255210 | Msa1343980 | 0.808057 | 3.733014e-50 | -8.615850e-47 |
| Msa1263110 | Msa1343980 | 0.810499 | 1.118272e-50 | -8.615850e-47 |
| Msa1269200 | Msa1343980 | 0.819961 | 8.821852e-53 | -8.615850e-47 |
| Msa1295650 | Msa1343980 | 0.810277 | 1.248559e-50 | -8.615850e-47 |
| Msa1328430 | Msa1343980 | 0.802693 | 4.970001e-49 | -8.615850e-47 |
| Msa1343980 | Msa1384700 | 0.823909 | 1.074480e-53 | -8.615850e-47 |
| Msa1343980 | Msa1386980 | 0.928973 | 1.351269e-92 | -8.615850e-47 |
| Msa1343980 | Msa1390200 | 0.802947 | 4.405685e-49 | -8.615850e-47 |
| Msa0388070 | Msa1343980 | 0.802505 | 5.435672e-49 | -8.615850e-47 |
| Msa0388210 | Msa1343980 | 0.809613 | 1.735383e-50 | -8.615850e-47 |
| Msa0405200 | Msa1343980 | 0.803255 | 3.803558e-49 | -8.615850e-47 |
| Msa0405210 | Msa1343980 | 0.811370 | 7.244019e-51 | -8.615850e-47 |
| Msa0419850 | Msa1343980 | 0.800873 | 1.174863e-48 | -8.615850e-47 |
| Msa0449500 | Msa1343980 | 0.813355 | 2.669658e-51 | -8.615850e-47 |
| Msa0472820 | Msa1343980 | 0.914586 | 1.610746e-84 | -8.615850e-47 |
| Msa1015360 | Msa1343980 | 0.809347 | 1.979583e-50 | -8.615850e-47 |
| Msa1056890 | Msa1343980 | 0.802571 | 5.266746e-49 | -8.615850e-47 |
| Msa1092310 | Msa1343980 | 0.810160 | 1.323637e-50 | -8.615850e-47 |
| Msa0242720 | Msa1343980 | 0.821291 | 4.365935e-53 | -8.615850e-47 |
| Msa0265650 | Msa1343980 | 0.822600 | 2.172630e-53 | -8.615850e-47 |
| Msa0308750 | Msa1343980 | 0.802531 | 5.367786e-49 | -8.615850e-47 |
| Msa0316740 | Msa1343980 | 0.807180 | 5.733973e-50 | -8.615850e-47 |
| Msa0345050 | Msa1343980 | 0.810603 | 1.061907e-50 | -8.615850e-47 |
| Msa0345890 | Msa1343980 | 0.806391 | 8.415552e-50 | -8.615850e-47 |
| Msa1108560 | Msa1343980 | 0.806490 | 8.021598e-50 | -8.615850e-47 |
| Msa1110900 | Msa1343980 | 0.803528 | 3.339602e-49 | -8.615850e-47 |
| Msa1184680 | Msa1343980 | 0.804428 | 2.170477e-49 | -8.615850e-47 |
| Msa1197720 | Msa1343980 | 0.803683 | 3.101051e-49 | -8.615850e-47 |
| Msa1202110 | Msa1343980 | 0.804553 | 2.044351e-49 | -8.615850e-47 |
| Msa1202800 | Msa1343980 | 0.825818 | 3.809960e-54 | -8.615850e-47 |
| Msa1223960 | Msa1343980 | 0.804992 | 1.655074e-49 | -8.615850e-47 |
| Msa0497680 | Msa1343980 | 0.809156 | 2.175138e-50 | -8.615850e-47 |
| Msa0531050 | Msa1343980 | 0.808665 | 2.770096e-50 | -8.615850e-47 |
| Msa0557240 | Msa1343980 | 0.806812 | 6.857930e-50 | -8.615850e-47 |
| Msa0588040 | Msa1343980 | 0.817388 | 3.383987e-52 | -8.615850e-47 |
| Msa0597820 | Msa1343980 | 0.810906 | 9.130650e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1343980 | MtrunA17_Chr3g0128761 | 92.746 | 193 | 14 | 0 | 17 | 209 | 10 | 202 | 6.22e-118 | 333 |
| Msa1343980 | MtrunA17_Chr1g0213011 | 32.227 | 211 | 131 | 5 | 6 | 208 | 8 | 214 | 3.54e-21 | 87.4 |
| Msa1343980 | MtrunA17_Chr1g0213031 | 28.019 | 207 | 139 | 4 | 6 | 205 | 11 | 214 | 2.72e-19 | 82.4 |
| Msa1343980 | MtrunA17_Chr1g0213021 | 29.048 | 210 | 137 | 6 | 6 | 207 | 11 | 216 | 1.04e-18 | 80.9 |
| Msa1343980 | MtrunA17_Chr1g0213051 | 27.907 | 215 | 144 | 6 | 1 | 205 | 1 | 214 | 5.64e-18 | 79.0 |
| Msa1343980 | MtrunA17_Chr1g0213041 | 28.293 | 205 | 139 | 5 | 8 | 205 | 11 | 214 | 6.98e-17 | 75.9 |
| Msa1343980 | MtrunA17_Chr2g0313901 | 28.000 | 200 | 133 | 6 | 10 | 207 | 86 | 276 | 3.57e-16 | 75.1 |
| Msa1343980 | MtrunA17_Chr7g0224381 | 28.758 | 153 | 102 | 3 | 1 | 146 | 1 | 153 | 1.33e-14 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1343980 | AT5G05270.1 | 63.158 | 209 | 76 | 1 | 1 | 208 | 1 | 209 | 2.54e-84 | 249 |
| Msa1343980 | AT5G05270.2 | 63.158 | 209 | 76 | 1 | 1 | 208 | 1 | 209 | 2.54e-84 | 249 |
| Msa1343980 | AT3G55120.1 | 30.374 | 214 | 129 | 8 | 8 | 209 | 21 | 226 | 6.91e-17 | 77.0 |
| Msa1343980 | AT1G53520.1 | 26.344 | 186 | 131 | 4 | 23 | 207 | 106 | 286 | 1.24e-15 | 73.9 |
| Msa1343980 | AT5G66230.2 | 29.108 | 213 | 125 | 8 | 8 | 209 | 11 | 208 | 6.81e-15 | 73.2 |
| Msa1343980 | AT5G66220.1 | 29.032 | 155 | 102 | 3 | 59 | 209 | 9 | 159 | 1.59e-13 | 66.2 |
Find 65 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATTCAATTGGGGTTTATT+TGG | 0.127513 | tig0006732:+749 | Msa1343980:CDS |
| AGAATTTCACTTGGAGAAAA+TGG | 0.134571 | tig0006732:-728 | Msa1343980:intergenic |
| TTCTTTGACGCTCTCATTTC+TGG | 0.168815 | tig0006732:+843 | Msa1343980:CDS |
| TGTTGTGATTAAAGAGATTA+AGG | 0.213746 | tig0006732:+1097 | Msa1343980:CDS |
| TCCTTCAACCATTACATCTT+TGG | 0.255062 | tig0006732:+1717 | Msa1343980:CDS |
| AATAAATTGTTATTCTTTGT+TGG | 0.283400 | tig0006732:+1928 | Msa1343980:three_prime_UTR |
| CAAGTGAAATTCTATTCAAT+TGG | 0.286514 | tig0006732:+738 | Msa1343980:CDS |
| AATACAGATTGTGGTATCTT+TGG | 0.300414 | tig0006732:+1603 | Msa1343980:intron |
| TGCAAGTGGCTTGCTACTTC+AGG | 0.308776 | tig0006732:-774 | Msa1343980:intergenic |
| AAGTGAAATTCTATTCAATT+GGG | 0.340514 | tig0006732:+739 | Msa1343980:CDS |
| AGTGGCTAGTGAAACTGTTT+TGG | 0.373529 | tig0006732:+361 | Msa1343980:intron |
| CATTGCACGTGTGGAATCTA+TGG | 0.382464 | tig0006732:-1957 | Msa1343980:intergenic |
| GAGATTAAGGGTGCACAATA+TGG | 0.383753 | tig0006732:+1110 | Msa1343980:CDS |
| GGATGAAGAAGAAGAAGCTT+TGG | 0.390087 | tig0006732:+1187 | Msa1343980:CDS |
| GACTTTCTCCACTTTGTTTG+CGG | 0.390887 | tig0006732:+1839 | Msa1343980:three_prime_UTR |
| TTGTCTTCCAACTCCTTGGC+AGG | 0.403272 | tig0006732:-813 | Msa1343980:intergenic |
| ATTAAGAAATGGTATCTTGC+TGG | 0.410454 | tig0006732:+1679 | Msa1343980:CDS |
| ACCAAGGAGAGAAAGGGTTT+TGG | 0.417350 | tig0006732:-420 | Msa1343980:intergenic |
| TCAGCAGTTGGAGAGTTTGC+TGG | 0.419031 | tig0006732:-1275 | Msa1343980:intergenic |
| GACCGCTGTGAGGGACCGTT+TGG | 0.422176 | tig0006732:+1145 | Msa1343980:CDS |
| ACCAAAACCCTTTCTCTCCT+TGG | 0.424712 | tig0006732:+419 | Msa1343980:CDS |
| CTTAATAGTCTCTACTACAT+TGG | 0.428653 | tig0006732:-1662 | Msa1343980:intergenic |
| TTGGTAGTAGTGATCTTTGA+AGG | 0.439710 | tig0006732:-401 | Msa1343980:intergenic |
| GTTGTGATTAAAGAGATTAA+GGG | 0.453545 | tig0006732:+1098 | Msa1343980:CDS |
| TTCATCCTCATATTTGTCAT+CGG | 0.460901 | tig0006732:-1171 | Msa1343980:intergenic |
| ATCATTGTCTTCCAACTCCT+TGG | 0.461782 | tig0006732:-817 | Msa1343980:intergenic |
| TAGTAGAGACTATTAAGAAA+TGG | 0.472191 | tig0006732:+1668 | Msa1343980:CDS |
| GTTTCTTGAAGTACTTAGAC+TGG | 0.476418 | tig0006732:-1229 | Msa1343980:intergenic |
| TACCATGACCAAGGAGAGAA+AGG | 0.488761 | tig0006732:-427 | Msa1343980:intergenic |
| GCCAAAGATGTAATGGTTGA+AGG | 0.506201 | tig0006732:-1718 | Msa1343980:intergenic |
| CAGCAGTTGGAGAGTTTGCT+GGG | 0.511362 | tig0006732:-1274 | Msa1343980:intergenic |
| TGGATAATTCCTCTGAGAGA+TGG | 0.511898 | tig0006732:-1744 | Msa1343980:intergenic |
| CAATTGAATAGAATTTCACT+TGG | 0.511986 | tig0006732:-737 | Msa1343980:intergenic |
| AGCTACTTTACCTCAGCAGT+TGG | 0.518480 | tig0006732:-1287 | Msa1343980:intergenic |
| AGTCTAATTGCCTTCTCCAC+AGG | 0.518956 | tig0006732:-1074 | Msa1343980:intergenic |
| CAGATTGTGGTATCTTTGGA+AGG | 0.521938 | tig0006732:+1607 | Msa1343980:intron |
| TACCTTTCCACTGTTGCAAG+TGG | 0.522349 | tig0006732:-788 | Msa1343980:intergenic |
| AAAGTTTGCCATTGCACGTG+TGG | 0.525483 | tig0006732:-1966 | Msa1343980:intergenic |
| ATGTGCAGCTCCTGTGGAGA+AGG | 0.525875 | tig0006732:+1064 | Msa1343980:intron |
| ATGGGTAGCCAAAGATGTAA+TGG | 0.528630 | tig0006732:-1725 | Msa1343980:intergenic |
| GGATAATTCCTCTGAGAGAT+GGG | 0.538139 | tig0006732:-1743 | Msa1343980:intergenic |
| ACCATGACCAAGGAGAGAAA+GGG | 0.540135 | tig0006732:-426 | Msa1343980:intergenic |
| ACCCTTTCTCTCCTTGGTCA+TGG | 0.540415 | tig0006732:+425 | Msa1343980:CDS |
| GTGAATATGTGCAGCTCCTG+TGG | 0.541590 | tig0006732:+1058 | Msa1343980:intron |
| AATGGTATCTTGCTGGCTCA+AGG | 0.546466 | tig0006732:+1686 | Msa1343980:CDS |
| CATAGATTCCACACGTGCAA+TGG | 0.557143 | tig0006732:+1958 | Msa1343980:three_prime_UTR |
| ATTTGTCATCGGCTGCCAAA+CGG | 0.557673 | tig0006732:-1160 | Msa1343980:intergenic |
| AGTGAAATTCTATTCAATTG+GGG | 0.558547 | tig0006732:+740 | Msa1343980:CDS |
| TGGTAGTAGTGATCTTTGAA+GGG | 0.566326 | tig0006732:-400 | Msa1343980:intergenic |
| ATGGTATCTTGCTGGCTCAA+GGG | 0.567607 | tig0006732:+1687 | Msa1343980:CDS |
| AGGTAAGCCTGCCAAGGAGT+TGG | 0.569479 | tig0006732:+806 | Msa1343980:CDS |
| TAGCAAGCCACTTGCAACAG+TGG | 0.573061 | tig0006732:+781 | Msa1343980:CDS |
| GGCAGCCGATGACAAATATG+AGG | 0.581635 | tig0006732:+1166 | Msa1343980:CDS |
| GCAGAATTCCGCAAACAAAG+TGG | 0.588511 | tig0006732:-1847 | Msa1343980:intergenic |
| TTTGATAGGGATTACCGACA+TGG | 0.591441 | tig0006732:+701 | Msa1343980:intron |
| AGCCACTTGCAACAGTGGAA+AGG | 0.600159 | tig0006732:+786 | Msa1343980:CDS |
| AGATTGTGGTATCTTTGGAA+GGG | 0.601655 | tig0006732:+1608 | Msa1343980:intron |
| GTGGAAAGGTAAGCCTGCCA+AGG | 0.623835 | tig0006732:+800 | Msa1343980:CDS |
| GAGAAAATGGATCTCCATGT+CGG | 0.629435 | tig0006732:-715 | Msa1343980:intergenic |
| TCAGATTGAGACCGCTGTGA+GGG | 0.629678 | tig0006732:+1136 | Msa1343980:CDS |
| AGCAAACTCTCCAACTGCTG+AGG | 0.645259 | tig0006732:+1277 | Msa1343980:CDS |
| TGCCAAACGGTCCCTCACAG+CGG | 0.689378 | tig0006732:-1147 | Msa1343980:intergenic |
| TTTGGCTACCCATCTCTCAG+AGG | 0.689828 | tig0006732:+1735 | Msa1343980:CDS |
| TTCAGATTGAGACCGCTGTG+AGG | 0.696200 | tig0006732:+1135 | Msa1343980:CDS |
| GTAGCAACTTACCATGACCA+AGG | 0.712424 | tig0006732:-436 | Msa1343970:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTTTAATAATAAATAATGT+TGG | - | tig0006732:12-31 | Msa1167550:intergenic | 10.0% |
| !! | TGTTTAATAATAAATAATGT+TGG | - | tig0006732:12-31 | Msa1343980:intergenic | 10.0% |
| !! | CAACATTTATGATATAATTA+AGG | - | tig0006732:1004-1023 | Msa1343980:intergenic | 15.0% |
| !!! | AATTAGTTTAAGTTGATTTT+AGG | + | tig0006732:1357-1376 | Msa1343980:intron | 15.0% |
| !!! | AAAAAAATTAAGTTGGTTAT+AGG | - | tig0006732:1430-1449 | Msa1343980:intergenic | 15.0% |
| !!! | AATTCTGCTTTTTAATTTAT+TGG | + | tig0006732:1862-1881 | Msa1343980:three_prime_UTR | 15.0% |
| !!! | AATAAATTGTTATTCTTTGT+TGG | + | tig0006732:1928-1947 | Msa1343980:three_prime_UTR | 15.0% |
| !! | CAACATTTATGATATAATTA+AGG | - | tig0006732:1004-1023 | Msa1343980:intergenic | 15.0% |
| !!! | AATTAGTTTAAGTTGATTTT+AGG | + | tig0006732:1357-1376 | Msa1343980:intron | 15.0% |
| !!! | AAAAAAATTAAGTTGGTTAT+AGG | - | tig0006732:1430-1449 | Msa1343980:intergenic | 15.0% |
| !!! | AATTCTGCTTTTTAATTTAT+TGG | + | tig0006732:1862-1881 | Msa1343980:three_prime_UTR | 15.0% |
| !!! | AATAAATTGTTATTCTTTGT+TGG | + | tig0006732:1928-1947 | Msa1343980:three_prime_UTR | 15.0% |
| !! | TCAAATCAAGAAAAAGAATT+TGG | - | tig0006732:490-509 | Msa1343980:intergenic | 20.0% |
| !!! | TCTTGATTTGATTTTGAATA+TGG | + | tig0006732:499-518 | Msa1343980:intron | 20.0% |
| !!! | CTTGATTTGATTTTGAATAT+GGG | + | tig0006732:500-519 | Msa1343980:intron | 20.0% |
| !!! | TTGATTTGATTTTGAATATG+GGG | + | tig0006732:501-520 | Msa1343980:intron | 20.0% |
| !! | AAGTGAAATTCTATTCAATT+GGG | + | tig0006732:739-758 | Msa1343980:CDS | 20.0% |
| !! | AAAGAAGTTGGATTATAAAA+GGG | - | tig0006732:880-899 | Msa1343980:intergenic | 20.0% |
| !!! | AACTAATTCTAAGAATGAAT+AGG | - | tig0006732:1345-1364 | Msa1343980:intergenic | 20.0% |
| !! | TTGTTAATATTAGTTGAAGT+TGG | - | tig0006732:1542-1561 | Msa1343980:intergenic | 20.0% |
| !! | TCAAATCAAGAAAAAGAATT+TGG | - | tig0006732:490-509 | Msa1343980:intergenic | 20.0% |
| !!! | TCTTGATTTGATTTTGAATA+TGG | + | tig0006732:499-518 | Msa1343980:intron | 20.0% |
| !!! | CTTGATTTGATTTTGAATAT+GGG | + | tig0006732:500-519 | Msa1343980:intron | 20.0% |
| !!! | TTGATTTGATTTTGAATATG+GGG | + | tig0006732:501-520 | Msa1343980:intron | 20.0% |
| !! | AAGTGAAATTCTATTCAATT+GGG | + | tig0006732:739-758 | Msa1343980:CDS | 20.0% |
| !! | AAAGAAGTTGGATTATAAAA+GGG | - | tig0006732:880-899 | Msa1343980:intergenic | 20.0% |
| !!! | AACTAATTCTAAGAATGAAT+AGG | - | tig0006732:1345-1364 | Msa1343980:intergenic | 20.0% |
| !! | TTGTTAATATTAGTTGAAGT+TGG | - | tig0006732:1542-1561 | Msa1343980:intergenic | 20.0% |
| !! | ATTGCTTAGGTTGTTATATA+AGG | - | tig0006732:128-147 | Msa1343980:intergenic | 25.0% |
| ! | GAATTTGGAAGAATTTCAAA+AGG | - | tig0006732:475-494 | Msa1343980:intergenic | 25.0% |
| !! | GGAAAATCAAGTTATTGATT+TGG | - | tig0006732:678-697 | Msa1343980:intergenic | 25.0% |
| !! | TTGATTTTCCTCTTTTGATA+GGG | + | tig0006732:688-707 | Msa1343980:intron | 25.0% |
| ! | CAATTGAATAGAATTTCACT+TGG | - | tig0006732:740-759 | Msa1343980:intergenic | 25.0% |
| ! | CAAGTGAAATTCTATTCAAT+TGG | + | tig0006732:738-757 | Msa1343980:CDS | 25.0% |
| ! | AGTGAAATTCTATTCAATTG+GGG | + | tig0006732:740-759 | Msa1343980:CDS | 25.0% |
| ! | GAAAGAAGTTGGATTATAAA+AGG | - | tig0006732:881-900 | Msa1343980:intergenic | 25.0% |
| ! | AAGATATTATCGAAAGAAGT+TGG | - | tig0006732:892-911 | Msa1343980:intergenic | 25.0% |
| ! | GAGCTCATCTATTTATTATT+TGG | + | tig0006732:952-971 | Msa1343980:intron | 25.0% |
| ! | TGTTGTGATTAAAGAGATTA+AGG | + | tig0006732:1097-1116 | Msa1343980:CDS | 25.0% |
| ! | GTTGTGATTAAAGAGATTAA+GGG | + | tig0006732:1098-1117 | Msa1343980:CDS | 25.0% |
| ! | AGAATGAATAGGATCAATTA+AGG | - | tig0006732:1334-1353 | Msa1343980:intergenic | 25.0% |
| ! | TATGAGATTTGAATTTCATC+CGG | + | tig0006732:1469-1488 | Msa1343980:intron | 25.0% |
| !!! | TAAGAGTTTGATTTTGTAAC+CGG | - | tig0006732:1491-1510 | Msa1343980:intergenic | 25.0% |
| ! | TAGTAGAGACTATTAAGAAA+TGG | + | tig0006732:1668-1687 | Msa1343980:CDS | 25.0% |
| !! | ATTGCTTAGGTTGTTATATA+AGG | - | tig0006732:128-147 | Msa1343980:intergenic | 25.0% |
| ! | GAATTTGGAAGAATTTCAAA+AGG | - | tig0006732:475-494 | Msa1343980:intergenic | 25.0% |
| !! | GGAAAATCAAGTTATTGATT+TGG | - | tig0006732:678-697 | Msa1343980:intergenic | 25.0% |
| !! | TTGATTTTCCTCTTTTGATA+GGG | + | tig0006732:688-707 | Msa1343980:intron | 25.0% |
| ! | CAATTGAATAGAATTTCACT+TGG | - | tig0006732:740-759 | Msa1343980:intergenic | 25.0% |
| ! | CAAGTGAAATTCTATTCAAT+TGG | + | tig0006732:738-757 | Msa1343980:CDS | 25.0% |
| ! | AGTGAAATTCTATTCAATTG+GGG | + | tig0006732:740-759 | Msa1343980:CDS | 25.0% |
| ! | GAAAGAAGTTGGATTATAAA+AGG | - | tig0006732:881-900 | Msa1343980:intergenic | 25.0% |
| ! | AAGATATTATCGAAAGAAGT+TGG | - | tig0006732:892-911 | Msa1343980:intergenic | 25.0% |
| ! | GAGCTCATCTATTTATTATT+TGG | + | tig0006732:952-971 | Msa1343980:intron | 25.0% |
| ! | TGTTGTGATTAAAGAGATTA+AGG | + | tig0006732:1097-1116 | Msa1343980:CDS | 25.0% |
| ! | GTTGTGATTAAAGAGATTAA+GGG | + | tig0006732:1098-1117 | Msa1343980:CDS | 25.0% |
| ! | AGAATGAATAGGATCAATTA+AGG | - | tig0006732:1334-1353 | Msa1343980:intergenic | 25.0% |
| ! | TATGAGATTTGAATTTCATC+CGG | + | tig0006732:1469-1488 | Msa1343980:intron | 25.0% |
| !!! | TAAGAGTTTGATTTTGTAAC+CGG | - | tig0006732:1491-1510 | Msa1343980:intergenic | 25.0% |
| ! | TAGTAGAGACTATTAAGAAA+TGG | + | tig0006732:1668-1687 | Msa1343980:CDS | 25.0% |
| AAGAATGGTAGATATTGCTT+AGG | - | tig0006732:141-160 | Msa1343980:intergenic | 30.0% | |
| CTTAAGATGAGATGTAAGAA+TGG | - | tig0006732:156-175 | Msa1343980:intergenic | 30.0% | |
| GTTTGTGAATTTGATTACAG+TGG | + | tig0006732:343-362 | Msa1343980:intron | 30.0% | |
| ! | CTTGATTTTCCTCTTTTGAT+AGG | + | tig0006732:687-706 | Msa1343980:intron | 30.0% |
| AGAATTTCACTTGGAGAAAA+TGG | - | tig0006732:731-750 | Msa1343980:intergenic | 30.0% | |
| CTATTCAATTGGGGTTTATT+TGG | + | tig0006732:749-768 | Msa1343980:CDS | 30.0% | |
| TTCATCCTCATATTTGTCAT+CGG | - | tig0006732:1174-1193 | Msa1343980:intergenic | 30.0% | |
| ACAACAAACAATCATCACAT+TGG | - | tig0006732:1583-1602 | Msa1343980:intergenic | 30.0% | |
| !! | GTTTGTTGTAATACAGATTG+TGG | + | tig0006732:1594-1613 | Msa1343980:intron | 30.0% |
| AATACAGATTGTGGTATCTT+TGG | + | tig0006732:1603-1622 | Msa1343980:intron | 30.0% | |
| CTTAATAGTCTCTACTACAT+TGG | - | tig0006732:1665-1684 | Msa1343980:intergenic | 30.0% | |
| ATTAAGAAATGGTATCTTGC+TGG | + | tig0006732:1679-1698 | Msa1343980:CDS | 30.0% | |
| ! | AACACAAAGTTTTCTTCACT+TGG | - | tig0006732:1767-1786 | Msa1343980:intergenic | 30.0% |
| !!! | TGCTGCTATTTTGTACTAAT+TGG | + | tig0006732:1816-1835 | Msa1343980:three_prime_UTR | 30.0% |
| !!! | GCTGCTATTTTGTACTAATT+GGG | + | tig0006732:1817-1836 | Msa1343980:three_prime_UTR | 30.0% |
| AAGAATGGTAGATATTGCTT+AGG | - | tig0006732:141-160 | Msa1343980:intergenic | 30.0% | |
| CTTAAGATGAGATGTAAGAA+TGG | - | tig0006732:156-175 | Msa1343980:intergenic | 30.0% | |
| GTTTGTGAATTTGATTACAG+TGG | + | tig0006732:343-362 | Msa1343980:intron | 30.0% | |
| ! | CTTGATTTTCCTCTTTTGAT+AGG | + | tig0006732:687-706 | Msa1343980:intron | 30.0% |
| AGAATTTCACTTGGAGAAAA+TGG | - | tig0006732:731-750 | Msa1343980:intergenic | 30.0% | |
| CTATTCAATTGGGGTTTATT+TGG | + | tig0006732:749-768 | Msa1343980:CDS | 30.0% | |
| TTCATCCTCATATTTGTCAT+CGG | - | tig0006732:1174-1193 | Msa1343980:intergenic | 30.0% | |
| ACAACAAACAATCATCACAT+TGG | - | tig0006732:1583-1602 | Msa1343980:intergenic | 30.0% | |
| !! | GTTTGTTGTAATACAGATTG+TGG | + | tig0006732:1594-1613 | Msa1343980:intron | 30.0% |
| AATACAGATTGTGGTATCTT+TGG | + | tig0006732:1603-1622 | Msa1343980:intron | 30.0% | |
| CTTAATAGTCTCTACTACAT+TGG | - | tig0006732:1665-1684 | Msa1343980:intergenic | 30.0% | |
| ATTAAGAAATGGTATCTTGC+TGG | + | tig0006732:1679-1698 | Msa1343980:CDS | 30.0% | |
| ! | AACACAAAGTTTTCTTCACT+TGG | - | tig0006732:1767-1786 | Msa1343980:intergenic | 30.0% |
| !!! | TGCTGCTATTTTGTACTAAT+TGG | + | tig0006732:1816-1835 | Msa1343980:three_prime_UTR | 30.0% |
| !!! | GCTGCTATTTTGTACTAATT+GGG | + | tig0006732:1817-1836 | Msa1343980:three_prime_UTR | 30.0% |
| ACTTGTGACTTTCTTTCAAG+TGG | - | tig0006732:47-66 | Msa1167550:intergenic | 35.0% | |
| CTACCACCTTAATTTAGCTA+CGG | + | tig0006732:84-103 | Msa1343980:five_prime_UTR | 35.0% | |
| TGGTAGTAGTGATCTTTGAA+GGG | - | tig0006732:403-422 | Msa1343980:intergenic | 35.0% | |
| ! | TTGGTAGTAGTGATCTTTGA+AGG | - | tig0006732:404-423 | Msa1343980:intergenic | 35.0% |
| CTAAAAGTAGCAAGAGATGT+AGG | + | tig0006732:618-637 | Msa1343980:intron | 35.0% | |
| ! | GTTTCTTGAAGTACTTAGAC+TGG | - | tig0006732:1232-1251 | Msa1343980:intergenic | 35.0% |
| GGTAGTTACAACTTACAAGT+TGG | + | tig0006732:1378-1397 | Msa1343980:intron | 35.0% | |
| !! | GTTACAACTTACAAGTTGGT+TGG | + | tig0006732:1382-1401 | Msa1343980:intron | 35.0% |
| ! | AGATTGTGGTATCTTTGGAA+GGG | + | tig0006732:1608-1627 | Msa1343980:intron | 35.0% |
| TCCTTCAACCATTACATCTT+TGG | + | tig0006732:1717-1736 | Msa1343980:CDS | 35.0% | |
| ACTTGTGACTTTCTTTCAAG+TGG | - | tig0006732:47-66 | Msa1343980:intergenic | 35.0% | |
| CTACCACCTTAATTTAGCTA+CGG | + | tig0006732:84-103 | Msa1343980:five_prime_UTR | 35.0% | |
| TGGTAGTAGTGATCTTTGAA+GGG | - | tig0006732:403-422 | Msa1343980:intergenic | 35.0% | |
| ! | TTGGTAGTAGTGATCTTTGA+AGG | - | tig0006732:404-423 | Msa1343980:intergenic | 35.0% |
| CTAAAAGTAGCAAGAGATGT+AGG | + | tig0006732:618-637 | Msa1343980:intron | 35.0% | |
| ! | GTTTCTTGAAGTACTTAGAC+TGG | - | tig0006732:1232-1251 | Msa1343980:intergenic | 35.0% |
| GGTAGTTACAACTTACAAGT+TGG | + | tig0006732:1378-1397 | Msa1343980:intron | 35.0% | |
| !! | GTTACAACTTACAAGTTGGT+TGG | + | tig0006732:1382-1401 | Msa1343980:intron | 35.0% |
| ! | AGATTGTGGTATCTTTGGAA+GGG | + | tig0006732:1608-1627 | Msa1343980:intron | 35.0% |
| TCCTTCAACCATTACATCTT+TGG | + | tig0006732:1717-1736 | Msa1343980:CDS | 35.0% | |
| CGTAGCTAAATTAAGGTGGT+AGG | - | tig0006732:86-105 | Msa1167550:intergenic | 40.0% | |
| ACTCCGTAGCTAAATTAAGG+TGG | - | tig0006732:90-109 | Msa1343980:intergenic | 40.0% | |
| CACACTCCGTAGCTAAATTA+AGG | - | tig0006732:93-112 | Msa1343980:intergenic | 40.0% | |
| TAGAGAGAATTGTGGTGAGA+TGG | - | tig0006732:192-211 | Msa1343980:intergenic | 40.0% | |
| AGAGGAAGTAGAGAGAATTG+TGG | - | tig0006732:200-219 | Msa1343980:intergenic | 40.0% | |
| ATCGATGTAGATAGAGACAG+AGG | - | tig0006732:218-237 | Msa1343980:intergenic | 40.0% | |
| AGCTCTTACTAGTTAGTTGC+TGG | - | tig0006732:243-262 | Msa1343980:intergenic | 40.0% | |
| ! | AGTGGCTAGTGAAACTGTTT+TGG | + | tig0006732:361-380 | Msa1343980:intron | 40.0% |
| TCGGTAATCCCTATCAAAAG+AGG | - | tig0006732:699-718 | Msa1343980:intergenic | 40.0% | |
| TTTGATAGGGATTACCGACA+TGG | + | tig0006732:701-720 | Msa1343980:intron | 40.0% | |
| GAGAAAATGGATCTCCATGT+CGG | - | tig0006732:718-737 | Msa1343980:intergenic | 40.0% | |
| ATCATTGTCTTCCAACTCCT+TGG | - | tig0006732:820-839 | Msa1343980:intergenic | 40.0% | |
| TTCTTTGACGCTCTCATTTC+TGG | + | tig0006732:843-862 | Msa1343980:CDS | 40.0% | |
| ! | GAGATTAAGGGTGCACAATA+TGG | + | tig0006732:1110-1129 | Msa1343980:CDS | 40.0% |
| GGATGAAGAAGAAGAAGCTT+TGG | + | tig0006732:1187-1206 | Msa1343980:CDS | 40.0% | |
| GTAAAGTAGCTAGCAGCATT+AGG | + | tig0006732:1299-1318 | Msa1343980:intron | 40.0% | |
| CAGATTGTGGTATCTTTGGA+AGG | + | tig0006732:1607-1626 | Msa1343980:intron | 40.0% | |
| GCCAAAGATGTAATGGTTGA+AGG | - | tig0006732:1721-1740 | Msa1343980:intergenic | 40.0% | |
| ATGGGTAGCCAAAGATGTAA+TGG | - | tig0006732:1728-1747 | Msa1343980:intergenic | 40.0% | |
| ! | GGATAATTCCTCTGAGAGAT+GGG | - | tig0006732:1746-1765 | Msa1343980:intergenic | 40.0% |
| ! | TGGATAATTCCTCTGAGAGA+TGG | - | tig0006732:1747-1766 | Msa1343980:intergenic | 40.0% |
| ! | GACTTTCTCCACTTTGTTTG+CGG | + | tig0006732:1839-1858 | Msa1343980:three_prime_UTR | 40.0% |
| CGTAGCTAAATTAAGGTGGT+AGG | - | tig0006732:86-105 | Msa1343980:intergenic | 40.0% | |
| ACTCCGTAGCTAAATTAAGG+TGG | - | tig0006732:90-109 | Msa1343980:intergenic | 40.0% | |
| CACACTCCGTAGCTAAATTA+AGG | - | tig0006732:93-112 | Msa1343980:intergenic | 40.0% | |
| TAGAGAGAATTGTGGTGAGA+TGG | - | tig0006732:192-211 | Msa1343980:intergenic | 40.0% | |
| AGAGGAAGTAGAGAGAATTG+TGG | - | tig0006732:200-219 | Msa1343980:intergenic | 40.0% | |
| ATCGATGTAGATAGAGACAG+AGG | - | tig0006732:218-237 | Msa1343980:intergenic | 40.0% | |
| AGCTCTTACTAGTTAGTTGC+TGG | - | tig0006732:243-262 | Msa1343980:intergenic | 40.0% | |
| ! | AGTGGCTAGTGAAACTGTTT+TGG | + | tig0006732:361-380 | Msa1343980:intron | 40.0% |
| TCGGTAATCCCTATCAAAAG+AGG | - | tig0006732:699-718 | Msa1343980:intergenic | 40.0% | |
| TTTGATAGGGATTACCGACA+TGG | + | tig0006732:701-720 | Msa1343980:intron | 40.0% | |
| GAGAAAATGGATCTCCATGT+CGG | - | tig0006732:718-737 | Msa1343980:intergenic | 40.0% | |
| ATCATTGTCTTCCAACTCCT+TGG | - | tig0006732:820-839 | Msa1343980:intergenic | 40.0% | |
| TTCTTTGACGCTCTCATTTC+TGG | + | tig0006732:843-862 | Msa1343980:CDS | 40.0% | |
| ! | GAGATTAAGGGTGCACAATA+TGG | + | tig0006732:1110-1129 | Msa1343980:CDS | 40.0% |
| GGATGAAGAAGAAGAAGCTT+TGG | + | tig0006732:1187-1206 | Msa1343980:CDS | 40.0% | |
| GTAAAGTAGCTAGCAGCATT+AGG | + | tig0006732:1299-1318 | Msa1343980:intron | 40.0% | |
| CAGATTGTGGTATCTTTGGA+AGG | + | tig0006732:1607-1626 | Msa1343980:intron | 40.0% | |
| GCCAAAGATGTAATGGTTGA+AGG | - | tig0006732:1721-1740 | Msa1343980:intergenic | 40.0% | |
| ATGGGTAGCCAAAGATGTAA+TGG | - | tig0006732:1728-1747 | Msa1343980:intergenic | 40.0% | |
| ! | GGATAATTCCTCTGAGAGAT+GGG | - | tig0006732:1746-1765 | Msa1343980:intergenic | 40.0% |
| ! | TGGATAATTCCTCTGAGAGA+TGG | - | tig0006732:1747-1766 | Msa1343980:intergenic | 40.0% |
| ! | GACTTTCTCCACTTTGTTTG+CGG | + | tig0006732:1839-1858 | Msa1343980:three_prime_UTR | 40.0% |
| ACCAAAACCCTTTCTCTCCT+TGG | + | tig0006732:419-438 | Msa1343980:CDS | 45.0% | |
| ! | ACCAAGGAGAGAAAGGGTTT+TGG | - | tig0006732:423-442 | Msa1343980:intergenic | 45.0% |
| ACCATGACCAAGGAGAGAAA+GGG | - | tig0006732:429-448 | Msa1343980:intergenic | 45.0% | |
| TACCATGACCAAGGAGAGAA+AGG | - | tig0006732:430-449 | Msa1343980:intergenic | 45.0% | |
| GTAGCAACTTACCATGACCA+AGG | - | tig0006732:439-458 | Msa1343980:intergenic | 45.0% | |
| TACCTTTCCACTGTTGCAAG+TGG | - | tig0006732:791-810 | Msa1343980:intergenic | 45.0% | |
| AGTCTAATTGCCTTCTCCAC+AGG | - | tig0006732:1077-1096 | Msa1343980:intergenic | 45.0% | |
| ! | ATTTGTCATCGGCTGCCAAA+CGG | - | tig0006732:1163-1182 | Msa1343980:intergenic | 45.0% |
| ! | AGCTACTTTACCTCAGCAGT+TGG | - | tig0006732:1290-1309 | Msa1343980:intergenic | 45.0% |
| !! | AATGGTATCTTGCTGGCTCA+AGG | + | tig0006732:1686-1705 | Msa1343980:CDS | 45.0% |
| !! | ATGGTATCTTGCTGGCTCAA+GGG | + | tig0006732:1687-1706 | Msa1343980:CDS | 45.0% |
| GCAGAATTCCGCAAACAAAG+TGG | - | tig0006732:1850-1869 | Msa1343980:intergenic | 45.0% | |
| CATTGCACGTGTGGAATCTA+TGG | - | tig0006732:1960-1979 | Msa1343980:intergenic | 45.0% | |
| CATAGATTCCACACGTGCAA+TGG | + | tig0006732:1958-1977 | Msa1343980:three_prime_UTR | 45.0% | |
| AAAGTTTGCCATTGCACGTG+TGG | - | tig0006732:1969-1988 | Msa1343980:intergenic | 45.0% | |
| ACCAAAACCCTTTCTCTCCT+TGG | + | tig0006732:419-438 | Msa1343980:CDS | 45.0% | |
| ! | ACCAAGGAGAGAAAGGGTTT+TGG | - | tig0006732:423-442 | Msa1343980:intergenic | 45.0% |
| ACCATGACCAAGGAGAGAAA+GGG | - | tig0006732:429-448 | Msa1343980:intergenic | 45.0% | |
| TACCATGACCAAGGAGAGAA+AGG | - | tig0006732:430-449 | Msa1343980:intergenic | 45.0% | |
| GTAGCAACTTACCATGACCA+AGG | - | tig0006732:439-458 | Msa1343980:intergenic | 45.0% | |
| TACCTTTCCACTGTTGCAAG+TGG | - | tig0006732:791-810 | Msa1343980:intergenic | 45.0% | |
| AGTCTAATTGCCTTCTCCAC+AGG | - | tig0006732:1077-1096 | Msa1343980:intergenic | 45.0% | |
| ! | ATTTGTCATCGGCTGCCAAA+CGG | - | tig0006732:1163-1182 | Msa1343980:intergenic | 45.0% |
| ! | AGCTACTTTACCTCAGCAGT+TGG | - | tig0006732:1290-1309 | Msa1343980:intergenic | 45.0% |
| !! | AATGGTATCTTGCTGGCTCA+AGG | + | tig0006732:1686-1705 | Msa1343980:CDS | 45.0% |
| !! | ATGGTATCTTGCTGGCTCAA+GGG | + | tig0006732:1687-1706 | Msa1343980:CDS | 45.0% |
| GCAGAATTCCGCAAACAAAG+TGG | - | tig0006732:1850-1869 | Msa1343980:intergenic | 45.0% | |
| CATTGCACGTGTGGAATCTA+TGG | - | tig0006732:1960-1979 | Msa1343980:intergenic | 45.0% | |
| CATAGATTCCACACGTGCAA+TGG | + | tig0006732:1958-1977 | Msa1343980:three_prime_UTR | 45.0% | |
| AAAGTTTGCCATTGCACGTG+TGG | - | tig0006732:1969-1988 | Msa1343980:intergenic | 45.0% | |
| !! | TAAAAAAAAAAAAATTAAGT+TGG | - | tig0006732:1437-1456 | Msa1343980:intergenic | 5.0% |
| !! | TAAAAAAAAAAAAATTAAGT+TGG | - | tig0006732:1437-1456 | Msa1343980:intergenic | 5.0% |
| ACCCTTTCTCTCCTTGGTCA+TGG | + | tig0006732:425-444 | Msa1343980:CDS | 50.0% | |
| !! | TGCAAGTGGCTTGCTACTTC+AGG | - | tig0006732:777-796 | Msa1343980:intergenic | 50.0% |
| TAGCAAGCCACTTGCAACAG+TGG | + | tig0006732:781-800 | Msa1343980:CDS | 50.0% | |
| AGCCACTTGCAACAGTGGAA+AGG | + | tig0006732:786-805 | Msa1343980:CDS | 50.0% | |
| TTGTCTTCCAACTCCTTGGC+AGG | - | tig0006732:816-835 | Msa1343980:intergenic | 50.0% | |
| GTGAATATGTGCAGCTCCTG+TGG | + | tig0006732:1058-1077 | Msa1343980:intron | 50.0% | |
| TTCAGATTGAGACCGCTGTG+AGG | + | tig0006732:1135-1154 | Msa1343980:CDS | 50.0% | |
| TCAGATTGAGACCGCTGTGA+GGG | + | tig0006732:1136-1155 | Msa1343980:CDS | 50.0% | |
| GGCAGCCGATGACAAATATG+AGG | + | tig0006732:1166-1185 | Msa1343980:CDS | 50.0% | |
| ! | CAGCAGTTGGAGAGTTTGCT+GGG | - | tig0006732:1277-1296 | Msa1343980:intergenic | 50.0% |
| TCAGCAGTTGGAGAGTTTGC+TGG | - | tig0006732:1278-1297 | Msa1343980:intergenic | 50.0% | |
| AGCAAACTCTCCAACTGCTG+AGG | + | tig0006732:1277-1296 | Msa1343980:CDS | 50.0% | |
| TTTGGCTACCCATCTCTCAG+AGG | + | tig0006732:1735-1754 | Msa1343980:CDS | 50.0% | |
| ACCCTTTCTCTCCTTGGTCA+TGG | + | tig0006732:425-444 | Msa1343980:CDS | 50.0% | |
| !! | TGCAAGTGGCTTGCTACTTC+AGG | - | tig0006732:777-796 | Msa1343980:intergenic | 50.0% |
| TAGCAAGCCACTTGCAACAG+TGG | + | tig0006732:781-800 | Msa1343980:CDS | 50.0% | |
| AGCCACTTGCAACAGTGGAA+AGG | + | tig0006732:786-805 | Msa1343980:CDS | 50.0% | |
| TTGTCTTCCAACTCCTTGGC+AGG | - | tig0006732:816-835 | Msa1343980:intergenic | 50.0% | |
| GTGAATATGTGCAGCTCCTG+TGG | + | tig0006732:1058-1077 | Msa1343980:intron | 50.0% | |
| TTCAGATTGAGACCGCTGTG+AGG | + | tig0006732:1135-1154 | Msa1343980:CDS | 50.0% | |
| TCAGATTGAGACCGCTGTGA+GGG | + | tig0006732:1136-1155 | Msa1343980:CDS | 50.0% | |
| GGCAGCCGATGACAAATATG+AGG | + | tig0006732:1166-1185 | Msa1343980:CDS | 50.0% | |
| ! | CAGCAGTTGGAGAGTTTGCT+GGG | - | tig0006732:1277-1296 | Msa1343980:intergenic | 50.0% |
| TCAGCAGTTGGAGAGTTTGC+TGG | - | tig0006732:1278-1297 | Msa1343980:intergenic | 50.0% | |
| AGCAAACTCTCCAACTGCTG+AGG | + | tig0006732:1277-1296 | Msa1343980:CDS | 50.0% | |
| TTTGGCTACCCATCTCTCAG+AGG | + | tig0006732:1735-1754 | Msa1343980:CDS | 50.0% | |
| GTGGAAAGGTAAGCCTGCCA+AGG | + | tig0006732:800-819 | Msa1343980:CDS | 55.0% | |
| AGGTAAGCCTGCCAAGGAGT+TGG | + | tig0006732:806-825 | Msa1343980:CDS | 55.0% | |
| ATGTGCAGCTCCTGTGGAGA+AGG | + | tig0006732:1064-1083 | Msa1343980:intron | 55.0% | |
| GTGGAAAGGTAAGCCTGCCA+AGG | + | tig0006732:800-819 | Msa1343980:CDS | 55.0% | |
| AGGTAAGCCTGCCAAGGAGT+TGG | + | tig0006732:806-825 | Msa1343980:CDS | 55.0% | |
| ATGTGCAGCTCCTGTGGAGA+AGG | + | tig0006732:1064-1083 | Msa1343980:intron | 55.0% | |
| TGCCAAACGGTCCCTCACAG+CGG | - | tig0006732:1150-1169 | Msa1343980:intergenic | 60.0% | |
| TGCCAAACGGTCCCTCACAG+CGG | - | tig0006732:1150-1169 | Msa1343980:intergenic | 60.0% | |
| GACCGCTGTGAGGGACCGTT+TGG | + | tig0006732:1145-1164 | Msa1343980:CDS | 65.0% | |
| GACCGCTGTGAGGGACCGTT+TGG | + | tig0006732:1145-1164 | Msa1343980:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0006732 | gene | 1 | 2007 | 1 | ID=Msa1343980;Name=Msa1343980 |
| tig0006732 | mRNA | 1 | 2007 | 1 | ID=Msa1343980-mRNA-1;Parent=Msa1343980;Name=Msa1343980-mRNA-1;_AED=0.03;_eAED=0.03;_QI=252|1|1|1|0.75|0.8|5|236|209 |
| tig0006732 | exon | 1 | 253 | 1 | ID=Msa1343980-mRNA-1:exon:4342;Parent=Msa1343980-mRNA-1 |
| tig0006732 | exon | 363 | 446 | 363 | ID=Msa1343980-mRNA-1:exon:4343;Parent=Msa1343980-mRNA-1 |
| tig0006732 | exon | 709 | 864 | 709 | ID=Msa1343980-mRNA-1:exon:4344;Parent=Msa1343980-mRNA-1 |
| tig0006732 | exon | 1072 | 1298 | 1072 | ID=Msa1343980-mRNA-1:exon:4345;Parent=Msa1343980-mRNA-1 |
| tig0006732 | exon | 1610 | 2007 | 1610 | ID=Msa1343980-mRNA-1:exon:4346;Parent=Msa1343980-mRNA-1 |
| tig0006732 | five_prime_UTR | 1 | 252 | 1 | ID=Msa1343980-mRNA-1:five_prime_utr;Parent=Msa1343980-mRNA-1 |
| tig0006732 | CDS | 253 | 253 | 253 | ID=Msa1343980-mRNA-1:cds;Parent=Msa1343980-mRNA-1 |
| tig0006732 | CDS | 363 | 446 | 363 | ID=Msa1343980-mRNA-1:cds;Parent=Msa1343980-mRNA-1 |
| tig0006732 | CDS | 709 | 864 | 709 | ID=Msa1343980-mRNA-1:cds;Parent=Msa1343980-mRNA-1 |
| tig0006732 | CDS | 1072 | 1298 | 1072 | ID=Msa1343980-mRNA-1:cds;Parent=Msa1343980-mRNA-1 |
| tig0006732 | CDS | 1610 | 1771 | 1610 | ID=Msa1343980-mRNA-1:cds;Parent=Msa1343980-mRNA-1 |
| tig0006732 | three_prime_UTR | 1772 | 2007 | 1772 | ID=Msa1343980-mRNA-1:three_prime_utr;Parent=Msa1343980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
