AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1390200


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1390200 MtrunA17_Chr3g0110261 93.539 356 3 1 1 336 1 356 0.0 675
Msa1390200 MtrunA17_Chr6g0479141 84.270 356 36 1 1 336 1 356 0.0 625
Msa1390200 MtrunA17_Chr5g0434471 82.254 355 43 1 2 336 3 357 0.0 607
Msa1390200 MtrunA17_Chr2g0287211 74.157 356 72 1 1 336 57 412 0.0 562
Msa1390200 MtrunA17_Chr2g0287181 70.506 356 85 1 1 336 57 412 0.0 541
Msa1390200 MtrunA17_Chr8g0364341 69.091 55 17 0 232 286 9 63 6.98e-20 82.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1390200 AT5G37600.1 83.989 356 37 1 1 336 1 356 0.0 627
Msa1390200 AT1G66200.1 83.427 356 39 1 1 336 1 356 0.0 625
Msa1390200 AT5G16570.1 84.551 356 35 1 1 336 1 356 0.0 623
Msa1390200 AT1G66200.3 81.370 365 39 1 1 336 1 365 0.0 621
Msa1390200 AT3G17820.1 80.453 353 49 1 1 333 1 353 0.0 593
Msa1390200 AT5G35630.3 72.191 356 79 1 1 336 59 414 0.0 547
Msa1390200 AT5G35630.2 72.191 356 79 1 1 336 59 414 0.0 547
Msa1390200 AT5G35630.1 72.191 356 79 1 1 336 59 414 0.0 547
Msa1390200 AT1G48470.1 75.740 338 62 1 16 333 16 353 0.0 546
Msa1390200 AT1G66200.2 81.349 252 27 1 1 232 1 252 1.02e-153 432
Msa1390200 AT5G16570.2 81.172 239 25 1 1 219 1 239 5.55e-141 399

Find 136 sgRNAs with CRISPR-Local

Find 570 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGCAAACCTTAATTGGTTT+TGG 0.177125 tig0021332:+61927 None:intergenic
CTTTGACCCAAAACCAATTA+AGG 0.180257 tig0021332:-61934 Msa1390200:intron
TGGAAATAGCAAACCTTAAT+TGG 0.193278 tig0021332:+61921 None:intergenic
ATGGGTTGCTCGTTACATTT+TGG 0.219815 tig0021332:-62119 Msa1390200:CDS
CTGACATTAACACCTTCTTA+TGG 0.238098 tig0021332:-61514 Msa1390200:CDS
GTTGATTACGCATTAGAATT+TGG 0.259893 tig0021332:-61104 Msa1390200:three_prime_UTR
ACTACTATAAATTTAACTTA+TGG 0.272583 tig0021332:-60854 Msa1390200:three_prime_UTR
TTGGATTTGTGTTATTGTTA+TGG 0.290371 tig0021332:-61062 Msa1390200:three_prime_UTR
CCTTCTTCCCTCATGGTCAT+TGG 0.292176 tig0021332:+60900 None:intergenic
CTGAAAGGAGAGACATGTTT+TGG 0.292470 tig0021332:+64626 None:intergenic
ACTTTGTTTGTTTGAATTTG+AGG 0.300071 tig0021332:-61034 Msa1390200:three_prime_UTR
TCAAATCGAATCGAATCTTT+AGG 0.306816 tig0021332:-64693 Msa1390200:five_prime_UTR
ATGTCTCTTGTTGGTGGGAA+TGG 0.309316 tig0021332:+62952 None:intergenic
TTCAAACTTAGTAAAATCTA+AGG 0.315824 tig0021332:+64656 None:intergenic
TCTCTGCTGGTGATGAGATA+TGG 0.322815 tig0021332:-62138 Msa1390200:CDS
AAGGAGCACATTGCTGCTTA+TGG 0.324475 tig0021332:-61578 Msa1390200:CDS
TAATGCAAAACTAGGGTGAT+TGG 0.338203 tig0021332:-61793 Msa1390200:intron
TGAATTTGAGGCCTCGTTAT+AGG 0.356622 tig0021332:-61022 Msa1390200:three_prime_UTR
TGACATTAACACCTTCTTAT+GGG 0.364511 tig0021332:-61513 Msa1390200:intron
TGCATAATATATGCAAGGTC+TGG 0.368560 tig0021332:+60784 None:intergenic
TTATTATTCTGACATTTACT+TGG 0.372035 tig0021332:+60977 None:intergenic
AGCTGTGAAGGGTCAGTAAC+TGG 0.376973 tig0021332:+63658 None:intergenic
GGTCTTATTTATAGCCTAGT+TGG 0.377270 tig0021332:+64781 None:intergenic
GGCAGCTGCATGTCTCTTGT+TGG 0.378014 tig0021332:+62943 None:intergenic
CATGTGTGTGTGGTGGCTTA+TGG 0.383641 tig0021332:+61150 None:intergenic
TATGTCAGGATTGGTGGATC+TGG 0.389845 tig0021332:-63838 Msa1390200:intron
GTGGGAATGGGTTCTCCAGC+TGG 0.392840 tig0021332:+62965 None:intergenic
AGAATCTAACCATATGTATT+CGG 0.402832 tig0021332:+64558 None:intergenic
CAGGATTGGTGGATCTGGTT+TGG 0.409454 tig0021332:-63833 Msa1390200:CDS
TGAAAGCAATTGAGAAGCTT+GGG 0.410163 tig0021332:-61610 Msa1390200:CDS
ATCATGGAAGTAACAACATA+TGG 0.411129 tig0021332:+61198 None:intergenic
TCCAGGAGCTTGACCTGTGC+TGG 0.411245 tig0021332:+63612 None:intergenic
CTGGTGCTCACACAAATTAC+AGG 0.417888 tig0021332:-61763 Msa1390200:intron
AAAGACATCAATTGGCCTCT+TGG 0.419531 tig0021332:-62752 Msa1390200:CDS
CCCTCAGTTGGTATCTCTGC+TGG 0.420001 tig0021332:-62151 Msa1390200:CDS
TTGAAAGCAATTGAGAAGCT+TGG 0.420009 tig0021332:-61611 Msa1390200:CDS
GGCAACGAGCGTAGATTGAC+AGG 0.421220 tig0021332:-61551 Msa1390200:CDS
TGTTGCAGAAAGACATCAAT+TGG 0.424542 tig0021332:-62760 Msa1390200:CDS
TGTCTCTTGTTGGTGGGAAT+GGG 0.425962 tig0021332:+62953 None:intergenic
ATTCCTGCCTTCTTCCCTCA+TGG 0.426313 tig0021332:+60893 None:intergenic
CTCTGCTGGTGATGAGATAT+GGG 0.426324 tig0021332:-62137 Msa1390200:CDS
TAGAGGATCACTGAGGTTGC+TGG 0.429246 tig0021332:-61969 Msa1390200:CDS
GCTGGTGCTGACAAGGCATT+TGG 0.430707 tig0021332:-62394 Msa1390200:CDS
GCATAATATATGCAAGGTCT+GGG 0.444486 tig0021332:+60785 None:intergenic
ATCAGGATGGCTGAAAATCT+TGG 0.445473 tig0021332:+62922 None:intergenic
CGGTGGTTTCGGAGAGGTCA+AGG 0.456062 tig0021332:+64593 None:intergenic
GTTCATTATGTCAGGATTGG+TGG 0.459850 tig0021332:-63844 Msa1390200:intron
GTGGATCTGGTTTGGACTTG+AGG 0.460278 tig0021332:-63825 Msa1390200:CDS
GGCTTATGGTTTCCAGAGAA+TGG 0.461165 tig0021332:+61164 None:intergenic
CCTCTTGGTTGGCCAGTTGG+TGG 0.462411 tig0021332:-62737 Msa1390200:CDS
AAATCATCGCCGAATACATA+TGG 0.465828 tig0021332:-64567 Msa1390200:intron
AGCTGCATGTCTCTTGTTGG+TGG 0.467488 tig0021332:+62946 None:intergenic
AATGGTGGTGTCTGCAATCA+TGG 0.470051 tig0021332:+61182 None:intergenic
TCCAGCACAGGTCAAGCTCC+TGG 0.473336 tig0021332:-63613 Msa1390200:CDS
TTGCAGACACCACCATTCTC+TGG 0.481231 tig0021332:-61176 Msa1390200:CDS
TGGCCTCTTGGTTGGCCAGT+TGG 0.482222 tig0021332:-62740 Msa1390200:CDS
AACTATGATGGTTCCAGCAC+AGG 0.485647 tig0021332:-63625 Msa1390200:CDS
GGTACTTCAGCAACAACATC+AGG 0.488296 tig0021332:+62905 None:intergenic
TTATTTGCTTACCCATAAGA+AGG 0.490705 tig0021332:+61502 None:intergenic
TTCCACTTGGGAAGCTGTGA+AGG 0.498232 tig0021332:+63646 None:intergenic
ACATCAATTGGCCTCTTGGT+TGG 0.505676 tig0021332:-62748 Msa1390200:CDS
CCAATGACCATGAGGGAAGA+AGG 0.505889 tig0021332:-60900 Msa1390200:three_prime_UTR
GAATCAAATGAAAACGAAAA+CGG 0.513020 tig0021332:+64722 None:intergenic
GCACCAGCACCACAATAGTA+TGG 0.514601 tig0021332:+62409 None:intergenic
GGAAGGGACACAGAGAAAGC+AGG 0.514679 tig0021332:-61264 Msa1390200:CDS
TTGTGAGCTGCTCAGTTGGT+AGG 0.515130 tig0021332:+60756 None:intergenic
ATCAACATCAGTGGAATCAA+TGG 0.515689 tig0021332:-62325 Msa1390200:CDS
CTTCCCAAGTGGAACTATGA+TGG 0.516245 tig0021332:-63637 Msa1390200:CDS
GGAAAGGTTATTTCGAGGAT+AGG 0.519246 tig0021332:-61242 Msa1390200:CDS
CACATTGCTGCTTATGGAGA+AGG 0.521068 tig0021332:-61572 Msa1390200:CDS
TACAAAGCCTGTCTTTATGC+CGG 0.521155 tig0021332:-62349 Msa1390200:CDS
ACCAAGTCTATGAGAGAAGA+TGG 0.523810 tig0021332:-61650 Msa1390200:CDS
TAGAGAAGGTGAGGAAGACT+AGG 0.524386 tig0021332:-64814 Msa1390200:five_prime_UTR
GTTGATGCCGGCATAAAGAC+AGG 0.529739 tig0021332:+62342 None:intergenic
GGACCATACTATTGTGGTGC+TGG 0.534606 tig0021332:-62412 Msa1390200:CDS
ACAGAGAAATGAGGCAGTGT+GGG 0.535734 tig0021332:+64759 None:intergenic
AAAAGATTATAGAGAAGGTG+AGG 0.538212 tig0021332:-64823 Msa1390200:five_prime_UTR
TATGGATCCATGTTAGATGA+TGG 0.538723 tig0021332:+61216 None:intergenic
GCTGCATGTCTCTTGTTGGT+GGG 0.539293 tig0021332:+62947 None:intergenic
GGTCCAGGAAAACCACCAAC+TGG 0.540153 tig0021332:+62725 None:intergenic
TTCCAAGTTGGTCCCTCAGT+TGG 0.551503 tig0021332:-62163 Msa1390200:CDS
CGTGGTGCGTCGATTAGAGT+TGG 0.552602 tig0021332:-61285 Msa1390200:CDS
ATAACTTCACTATCTTCTCC+AGG 0.553474 tig0021332:+63595 None:intergenic
GATCACTGAGGTTGCTGGTG+TGG 0.554625 tig0021332:-61964 Msa1390200:CDS
GATTCCACTGATGTTGATGC+CGG 0.555187 tig0021332:+62330 None:intergenic
AGCAGGGAAAGGTTATTTCG+AGG 0.555891 tig0021332:-61247 Msa1390200:CDS
AAGGTTATTTCGAGGATAGG+AGG 0.561130 tig0021332:-61239 Msa1390200:CDS
GTCCTTGTGAGCTGCTCAGT+TGG 0.565947 tig0021332:+60752 None:intergenic
TGACCATGAGGGAAGAAGGC+AGG 0.566416 tig0021332:-60896 Msa1390200:three_prime_UTR
TGGACTTGAGGAGCAAAGCA+AGG 0.567464 tig0021332:-63813 Msa1390200:CDS
ACCATCTTCTCTCATAGACT+TGG 0.571470 tig0021332:+61649 None:intergenic
GGAACCATCATAGTTCCACT+TGG 0.572427 tig0021332:+63633 None:intergenic
ATTGATGTCTTTCTGCAACA+AGG 0.574318 tig0021332:+62763 None:intergenic
TTGTGGTGCTGGTGCTGACA+AGG 0.575827 tig0021332:-62401 Msa1390200:CDS
TGTGATGCATACACTCCAGC+TGG 0.581505 tig0021332:-62980 Msa1390200:CDS
TACCAACTGAGCAGCTCACA+AGG 0.581680 tig0021332:-60754 Msa1390200:three_prime_UTR
TACCAACTGAGGGACCAACT+TGG 0.582203 tig0021332:+62161 None:intergenic
GTGCGTCGATTAGAGTTGGA+AGG 0.584013 tig0021332:-61281 Msa1390200:CDS
ATGTAGTGGGAATTCCAAGT+TGG 0.586154 tig0021332:-62175 Msa1390200:intron
TAGGGTGATTGGAATGGTGC+TGG 0.586935 tig0021332:-61782 Msa1390200:CDS
ATCAATGGTGAAGTGATGCC+TGG 0.592881 tig0021332:-62310 Msa1390200:CDS
TACAATGCATAATATATGCA+AGG 0.595528 tig0021332:+60779 None:intergenic
TCCACTTGGGAAGCTGTGAA+GGG 0.596916 tig0021332:+63647 None:intergenic
GACACAGAGAAAGCAGGGAA+AGG 0.598045 tig0021332:-61258 Msa1390200:CDS
GAAGGGTCAGTAACTGGACC+TGG 0.599215 tig0021332:+63664 None:intergenic
CAATAGGGACCATACTATTG+TGG 0.601480 tig0021332:-62418 Msa1390200:intron
ACCCTTCACAGCTTCCCAAG+TGG 0.605168 tig0021332:-63648 Msa1390200:CDS
TAAGTCCAACTTACTTGACC+AGG 0.608274 tig0021332:+62292 None:intergenic
GGACTTGAGGAGCAAAGCAA+GGG 0.609551 tig0021332:-63812 Msa1390200:intron
CAACTCTAATCGACGCACCA+CGG 0.611739 tig0021332:+61286 None:intergenic
CAAGGTTGATAAGATCTGAA+AGG 0.614499 tig0021332:+64611 None:intergenic
TTCAATGCATGTGTGTGTGG+TGG 0.619576 tig0021332:+61143 None:intergenic
TACTTCAATGCATGTGTGTG+TGG 0.619637 tig0021332:+61140 None:intergenic
TAGGAGGCCATCATCTAACA+TGG 0.627480 tig0021332:-61223 Msa1390200:CDS
CAAAACTAGGGTGATTGGAA+TGG 0.637511 tig0021332:-61788 Msa1390200:intron
GAAGGGACACAGAGAAAGCA+GGG 0.638354 tig0021332:-61263 Msa1390200:CDS
TGCGTCGATTAGAGTTGGAA+GGG 0.644595 tig0021332:-61280 Msa1390200:CDS
GAACCATCATAGTTCCACTT+GGG 0.652093 tig0021332:+63634 None:intergenic
AACAGAGAAATGAGGCAGTG+TGG 0.654868 tig0021332:+64758 None:intergenic
TTGAAGGGTGTTGCAAACCG+TGG 0.663350 tig0021332:-61303 Msa1390200:intron
TTATGGTTTCCAGAGAATGG+TGG 0.667248 tig0021332:+61167 None:intergenic
ACCAGCAGAGATACCAACTG+AGG 0.670459 tig0021332:+62150 None:intergenic
CCACCAACTGGCCAACCAAG+AGG 0.671238 tig0021332:+62737 None:intergenic
CAGAGAAATGAGGCAGTGTG+GGG 0.672345 tig0021332:+64760 None:intergenic
TATGCCGGCATCAACATCAG+TGG 0.676060 tig0021332:-62334 Msa1390200:CDS
CTTCAGCAACAACATCAGGA+TGG 0.677550 tig0021332:+62909 None:intergenic
CATAATATATGCAAGGTCTG+GGG 0.677890 tig0021332:+60786 None:intergenic
CCAGCAGAGATACCAACTGA+GGG 0.678315 tig0021332:+62151 None:intergenic
AATGTGAGTCAACAATGTCA+CGG 0.681181 tig0021332:+62371 None:intergenic
TTGTTGTGAACAGAGAAATG+AGG 0.688616 tig0021332:+64750 None:intergenic
GCAACGAGCGTAGATTGACA+GGG 0.702514 tig0021332:-61550 Msa1390200:CDS
ATGTTGTTGCTGAAGTACCA+TGG 0.706598 tig0021332:-62901 Msa1390200:intron
GAAGCTTGGGAAGAAGCACA+AGG 0.711059 tig0021332:-61597 Msa1390200:CDS
GAAATATGAAACCTATAACG+AGG 0.728719 tig0021332:+61011 None:intergenic
AAGTCTATGAGAGAAGATGG+TGG 0.739470 tig0021332:-61647 Msa1390200:CDS
GTTCCAATAGAGGATCACTG+AGG 0.789699 tig0021332:-61976 Msa1390200:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTTATTGAAGATATAAA+TGG - tig0021332:61867-61886 Msa1390200:intron 10.0%
!! ACAAAATATATACATAATTA+AGG + tig0021332:62053-62072 None:intergenic 10.0%
!!! TATTATGATTTTTACTTATT+TGG - tig0021332:62089-62108 Msa1390200:intron 10.0%
!!! ATTATGATTTTTACTTATTT+GGG - tig0021332:62090-62109 Msa1390200:intron 10.0%
!!! TAAACAAATTTAAAACAATT+AGG + tig0021332:63004-63023 None:intergenic 10.0%
!! AAAAAAATAACATAAAACTA+TGG + tig0021332:63029-63048 None:intergenic 10.0%
!!! AATCAACAATAATTATTTTA+CGG + tig0021332:64637-64656 None:intergenic 10.0%
!! TAATTTATTGAAGATATAAA+TGG - tig0021332:61867-61886 Msa1390200:intron 10.0%
!! ACAAAATATATACATAATTA+AGG + tig0021332:62053-62072 None:intergenic 10.0%
!!! TATTATGATTTTTACTTATT+TGG - tig0021332:62089-62108 Msa1390200:intron 10.0%
!!! ATTATGATTTTTACTTATTT+GGG - tig0021332:62090-62109 Msa1390200:intron 10.0%
!!! TAAACAAATTTAAAACAATT+AGG + tig0021332:63004-63023 None:intergenic 10.0%
!! AAAAAAATAACATAAAACTA+TGG + tig0021332:63029-63048 None:intergenic 10.0%
!!! AATCAACAATAATTATTTTA+CGG + tig0021332:64637-64656 None:intergenic 10.0%
!!! ATAGATTTTTAAGTTGATTT+TGG - tig0021332:61366-61385 Msa1390200:intron 15.0%
!!! TAGATTTTTAAGTTGATTTT+GGG - tig0021332:61367-61386 Msa1390200:intron 15.0%
!!! TTTTTTGTTTGGAATAAAAT+TGG - tig0021332:61512-61531 Msa1390200:intron 15.0%
!! TGAACATAAATTAATCAAAA+GGG + tig0021332:61717-61736 None:intergenic 15.0%
!! ATGAACATAAATTAATCAAA+AGG + tig0021332:61718-61737 None:intergenic 15.0%
!!! TTATGATTTTTACTTATTTG+GGG - tig0021332:62091-62110 Msa1390200:intron 15.0%
!!! TAGTAATTTTGATACATTTA+AGG + tig0021332:62259-62278 None:intergenic 15.0%
!! ATTTAATTAAACACAAAAGA+GGG + tig0021332:62566-62585 None:intergenic 15.0%
!! AATTTAATTAAACACAAAAG+AGG + tig0021332:62567-62586 None:intergenic 15.0%
!!! TTTTGTGTTTAATTAAATTC+AGG - tig0021332:62568-62587 Msa1390200:intron 15.0%
!!! AATTTAAAACAATTAGGTAT+GGG + tig0021332:62998-63017 None:intergenic 15.0%
!!! AAATTTAAAACAATTAGGTA+TGG + tig0021332:62999-63018 None:intergenic 15.0%
!!! TATTTTATAATTTGCTCAAT+AGG - tig0021332:63142-63161 Msa1390200:intron 15.0%
!!! ATTTTATAATTTGCTCAATA+GGG - tig0021332:63143-63162 Msa1390200:intron 15.0%
!! TAGTAAATAATAATGCTAAA+GGG + tig0021332:63315-63334 None:intergenic 15.0%
!!! TATTGTTTTTTTAATGTAGT+GGG - tig0021332:63388-63407 Msa1390200:intron 15.0%
!!! TATTTTTTTAATGCAAAACT+AGG - tig0021332:63775-63794 Msa1390200:intron 15.0%
!!! ATTTTTTTAATGCAAAACTA+GGG - tig0021332:63776-63795 Msa1390200:intron 15.0%
!!! CTATAGTTGAATATTTTATA+TGG - tig0021332:63867-63886 Msa1390200:intron 15.0%
!!! TTTTCTTTTTTTTCTTTTCT+TGG + tig0021332:64116-64135 None:intergenic 15.0%
!!! ACTACTATAAATTTAACTTA+TGG - tig0021332:64722-64741 Msa1390200:five_prime_UTR 15.0%
!!! ATAGATTTTTAAGTTGATTT+TGG - tig0021332:61366-61385 Msa1390200:intron 15.0%
!!! TAGATTTTTAAGTTGATTTT+GGG - tig0021332:61367-61386 Msa1390200:intron 15.0%
!!! TTTTTTGTTTGGAATAAAAT+TGG - tig0021332:61512-61531 Msa1390200:intron 15.0%
!! TGAACATAAATTAATCAAAA+GGG + tig0021332:61717-61736 None:intergenic 15.0%
!! ATGAACATAAATTAATCAAA+AGG + tig0021332:61718-61737 None:intergenic 15.0%
!!! TTATGATTTTTACTTATTTG+GGG - tig0021332:62091-62110 Msa1390200:intron 15.0%
!!! TAGTAATTTTGATACATTTA+AGG + tig0021332:62259-62278 None:intergenic 15.0%
!! ATTTAATTAAACACAAAAGA+GGG + tig0021332:62566-62585 None:intergenic 15.0%
!! AATTTAATTAAACACAAAAG+AGG + tig0021332:62567-62586 None:intergenic 15.0%
!!! TTTTGTGTTTAATTAAATTC+AGG - tig0021332:62568-62587 Msa1390200:intron 15.0%
!!! AATTTAAAACAATTAGGTAT+GGG + tig0021332:62998-63017 None:intergenic 15.0%
!!! AAATTTAAAACAATTAGGTA+TGG + tig0021332:62999-63018 None:intergenic 15.0%
!!! TATTTTATAATTTGCTCAAT+AGG - tig0021332:63142-63161 Msa1390200:intron 15.0%
!!! ATTTTATAATTTGCTCAATA+GGG - tig0021332:63143-63162 Msa1390200:intron 15.0%
!! TAGTAAATAATAATGCTAAA+GGG + tig0021332:63315-63334 None:intergenic 15.0%
!!! TATTGTTTTTTTAATGTAGT+GGG - tig0021332:63388-63407 Msa1390200:intron 15.0%
!!! TATTTTTTTAATGCAAAACT+AGG - tig0021332:63775-63794 Msa1390200:intron 15.0%
!!! ATTTTTTTAATGCAAAACTA+GGG - tig0021332:63776-63795 Msa1390200:intron 15.0%
!!! CTATAGTTGAATATTTTATA+TGG - tig0021332:63867-63886 Msa1390200:intron 15.0%
!!! TTTTCTTTTTTTTCTTTTCT+TGG + tig0021332:64116-64135 None:intergenic 15.0%
!!! ACTACTATAAATTTAACTTA+TGG - tig0021332:64722-64741 Msa1390200:five_prime_UTR 15.0%
!! TTCAAACTTAGTAAAATCTA+AGG + tig0021332:60923-60942 None:intergenic 20.0%
!!! CTCTCTTTTTTTAGTTATTT+TGG - tig0021332:61308-61327 Msa1390200:intron 20.0%
!!! AATGACTTTGTTTTTTTGTT+TGG - tig0021332:61501-61520 Msa1390200:intron 20.0%
!! AAGAATTTAATATCATGGTT+TGG + tig0021332:61651-61670 None:intergenic 20.0%
!! GAACATAAATTAATCAAAAG+GGG + tig0021332:61716-61735 None:intergenic 20.0%
!! TAATTTATGTTCATTATGTC+AGG - tig0021332:61724-61743 Msa1390200:intron 20.0%
!!! AAGATATAAATGGCTTTTTT+TGG - tig0021332:61877-61896 Msa1390200:intron 20.0%
!!! AGATATAAATGGCTTTTTTT+GGG - tig0021332:61878-61897 Msa1390200:intron 20.0%
!!! TATTTTGTTCTCTATTTTCT+TGG - tig0021332:62065-62084 Msa1390200:intron 20.0%
!!! TTGTCTTTTGTTAATTAGTT+TGG - tig0021332:62324-62343 Msa1390200:CDS 20.0%
!! GTAGTAAATAATAATGCTAA+AGG + tig0021332:63316-63335 None:intergenic 20.0%
!!! CTATTGTTTTTTTAATGTAG+TGG - tig0021332:63387-63406 Msa1390200:intron 20.0%
!! TATAAGACAAGTATATCAAT+TGG + tig0021332:63732-63751 None:intergenic 20.0%
!!! TTGAATATTTTATATGGTCA+TGG - tig0021332:63873-63892 Msa1390200:intron 20.0%
!!! TTTTTTGTTGTTCTAATTGT+TGG - tig0021332:64235-64254 Msa1390200:intron 20.0%
!! TTATTATTCTGACATTTACT+TGG + tig0021332:64602-64621 None:intergenic 20.0%
!! TTCAAACTTAGTAAAATCTA+AGG + tig0021332:60923-60942 None:intergenic 20.0%
!!! CTCTCTTTTTTTAGTTATTT+TGG - tig0021332:61308-61327 Msa1390200:intron 20.0%
!!! AATGACTTTGTTTTTTTGTT+TGG - tig0021332:61501-61520 Msa1390200:intron 20.0%
!! AAGAATTTAATATCATGGTT+TGG + tig0021332:61651-61670 None:intergenic 20.0%
!! GAACATAAATTAATCAAAAG+GGG + tig0021332:61716-61735 None:intergenic 20.0%
!! TAATTTATGTTCATTATGTC+AGG - tig0021332:61724-61743 Msa1390200:intron 20.0%
!!! AAGATATAAATGGCTTTTTT+TGG - tig0021332:61877-61896 Msa1390200:intron 20.0%
!!! AGATATAAATGGCTTTTTTT+GGG - tig0021332:61878-61897 Msa1390200:intron 20.0%
!!! TATTTTGTTCTCTATTTTCT+TGG - tig0021332:62065-62084 Msa1390200:intron 20.0%
!!! TTGTCTTTTGTTAATTAGTT+TGG - tig0021332:62324-62343 Msa1390200:CDS 20.0%
!! GTAGTAAATAATAATGCTAA+AGG + tig0021332:63316-63335 None:intergenic 20.0%
!!! CTATTGTTTTTTTAATGTAG+TGG - tig0021332:63387-63406 Msa1390200:intron 20.0%
!! TATAAGACAAGTATATCAAT+TGG + tig0021332:63732-63751 None:intergenic 20.0%
!!! TTGAATATTTTATATGGTCA+TGG - tig0021332:63873-63892 Msa1390200:intron 20.0%
!!! TTTTTTGTTGTTCTAATTGT+TGG - tig0021332:64235-64254 Msa1390200:intron 20.0%
!! TTATTATTCTGACATTTACT+TGG + tig0021332:64602-64621 None:intergenic 20.0%
! GAATCAAATGAAAACGAAAA+CGG + tig0021332:60857-60876 None:intergenic 25.0%
! AGAATCTAACCATATGTATT+CGG + tig0021332:61021-61040 None:intergenic 25.0%
! AAAAGAGAGAAAATAATCAC+TGG + tig0021332:61297-61316 None:intergenic 25.0%
! AGAACAGAAAAAATCATCAT+GGG + tig0021332:61429-61448 None:intergenic 25.0%
!!! TTTAATATCATGGTTTGGTT+TGG + tig0021332:61646-61665 None:intergenic 25.0%
!! TTGTTGTATGATTTGTGATT+AGG - tig0021332:62768-62787 Msa1390200:CDS 25.0%
! TGCACAATCATATAAGAAAA+TGG - tig0021332:62937-62956 Msa1390200:CDS 25.0%
!!! GGTGAATTTTTTATTGTCAT+TGG - tig0021332:63082-63101 Msa1390200:intron 25.0%
! AACAAAGAAAGTTAGTTAGT+TGG + tig0021332:63577-63596 None:intergenic 25.0%
! GAATAACTTGATTCAAACTA+GGG + tig0021332:63681-63700 None:intergenic 25.0%
! AGAATAACTTGATTCAAACT+AGG + tig0021332:63682-63701 None:intergenic 25.0%
! AAAAACAAATGTTACAGACT+AGG + tig0021332:64215-64234 None:intergenic 25.0%
!!! ATTTGGTCATTGTTTTTTCT+AGG - tig0021332:64489-64508 Msa1390200:intron 25.0%
!!! TCATTGTTTTTTCTAGGATT+TGG - tig0021332:64495-64514 Msa1390200:intron 25.0%
!! TTGGATTTGTGTTATTGTTA+TGG - tig0021332:64514-64533 Msa1390200:intron 25.0%
!! ACTTTGTTTGTTTGAATTTG+AGG - tig0021332:64542-64561 Msa1390200:intron 25.0%
!!! CTTTTTGGTTGGATTTTTTT+TGG - tig0021332:64752-64771 Msa1390200:five_prime_UTR 25.0%
! TACAATGCATAATATATGCA+AGG + tig0021332:64800-64819 None:intergenic 25.0%
! GAATCAAATGAAAACGAAAA+CGG + tig0021332:60857-60876 None:intergenic 25.0%
! AGAATCTAACCATATGTATT+CGG + tig0021332:61021-61040 None:intergenic 25.0%
! AAAAGAGAGAAAATAATCAC+TGG + tig0021332:61297-61316 None:intergenic 25.0%
! AGAACAGAAAAAATCATCAT+GGG + tig0021332:61429-61448 None:intergenic 25.0%
!!! TTTAATATCATGGTTTGGTT+TGG + tig0021332:61646-61665 None:intergenic 25.0%
!! TTGTTGTATGATTTGTGATT+AGG - tig0021332:62768-62787 Msa1390200:CDS 25.0%
! TGCACAATCATATAAGAAAA+TGG - tig0021332:62937-62956 Msa1390200:CDS 25.0%
!!! GGTGAATTTTTTATTGTCAT+TGG - tig0021332:63082-63101 Msa1390200:intron 25.0%
! AACAAAGAAAGTTAGTTAGT+TGG + tig0021332:63577-63596 None:intergenic 25.0%
! GAATAACTTGATTCAAACTA+GGG + tig0021332:63681-63700 None:intergenic 25.0%
! AGAATAACTTGATTCAAACT+AGG + tig0021332:63682-63701 None:intergenic 25.0%
! AAAAACAAATGTTACAGACT+AGG + tig0021332:64215-64234 None:intergenic 25.0%
!!! ATTTGGTCATTGTTTTTTCT+AGG - tig0021332:64489-64508 Msa1390200:intron 25.0%
!!! TCATTGTTTTTTCTAGGATT+TGG - tig0021332:64495-64514 Msa1390200:intron 25.0%
!! TTGGATTTGTGTTATTGTTA+TGG - tig0021332:64514-64533 Msa1390200:intron 25.0%
!! ACTTTGTTTGTTTGAATTTG+AGG - tig0021332:64542-64561 Msa1390200:intron 25.0%
!!! CTTTTTGGTTGGATTTTTTT+TGG - tig0021332:64752-64771 Msa1390200:five_prime_UTR 25.0%
! TACAATGCATAATATATGCA+AGG + tig0021332:64800-64819 None:intergenic 25.0%
AAAAGATTATAGAGAAGGTG+AGG - tig0021332:60753-60772 Msa1390200:three_prime_UTR 30.0%
TCAAATCGAATCGAATCTTT+AGG - tig0021332:60883-60902 Msa1390200:three_prime_UTR 30.0%
!! TTTTGTTTGTAAGCATGTGA+GGG + tig0021332:61054-61073 None:intergenic 30.0%
!! TTTTTGTTTGTAAGCATGTG+AGG + tig0021332:61055-61074 None:intergenic 30.0%
! ATGATTCTAGAAAAACGTTG+CGG + tig0021332:61195-61214 None:intergenic 30.0%
!!! TAAGTTGATTTTGGGATATG+AGG - tig0021332:61375-61394 Msa1390200:intron 30.0%
CAGAACAGAAAAAATCATCA+TGG + tig0021332:61430-61449 None:intergenic 30.0%
!!! TGTTTTTTGATGGTTGAGTA+TGG - tig0021332:61454-61473 Msa1390200:intron 30.0%
CGCACAAGAATTTAATATCA+TGG + tig0021332:61656-61675 None:intergenic 30.0%
TATGTTCATTATGTCAGGAT+TGG - tig0021332:61729-61748 Msa1390200:intron 30.0%
!! GATTTTTACTTATTTGGGGT+TGG - tig0021332:62095-62114 Msa1390200:intron 30.0%
TCTAAATGGATCCTTGAAAA+TGG + tig0021332:62140-62159 None:intergenic 30.0%
!! TTTTCAAGGATCCATTTAGA+AGG - tig0021332:62140-62159 Msa1390200:CDS 30.0%
TTTCAAGGATCCATTTAGAA+GGG - tig0021332:62141-62160 Msa1390200:CDS 30.0%
ATATTGTTACCCCTTCTAAA+TGG + tig0021332:62154-62173 None:intergenic 30.0%
ATACATTTAAGGACTAACGA+CGG + tig0021332:62248-62267 None:intergenic 30.0%
CAGATGATTCAATATACAAC+AGG + tig0021332:62482-62501 None:intergenic 30.0%
! GTATGATTTGTGATTAGGTA+TGG - tig0021332:62773-62792 Msa1390200:CDS 30.0%
TCTCATATTATTACCACTCA+TGG + tig0021332:62968-62987 None:intergenic 30.0%
! CTCAATTTGAACTTGTCTTT+TGG - tig0021332:63061-63080 Msa1390200:intron 30.0%
! AATAAGTCAAAAAGAGGTGT+TGG + tig0021332:63530-63549 None:intergenic 30.0%
CCATTCAATAAGTCAAAAAG+AGG + tig0021332:63536-63555 None:intergenic 30.0%
!!! CCTCTTTTTGACTTATTGAA+TGG - tig0021332:63533-63552 Msa1390200:intron 30.0%
! CTTTGTTTATGTTCCAATAG+AGG - tig0021332:63590-63609 Msa1390200:intron 30.0%
!!! AGCAAACCTTAATTGGTTTT+GGG + tig0021332:63651-63670 None:intergenic 30.0%
!! TAGCAAACCTTAATTGGTTT+TGG + tig0021332:63652-63671 None:intergenic 30.0%
TGGAAATAGCAAACCTTAAT+TGG + tig0021332:63658-63677 None:intergenic 30.0%
TATATCAATTGGAAAGGAGT+TGG + tig0021332:63721-63740 None:intergenic 30.0%
GACAAGTATATCAATTGGAA+AGG + tig0021332:63727-63746 None:intergenic 30.0%
TGACATTAACACCTTCTTAT+GGG - tig0021332:64063-64082 Msa1390200:intron 30.0%
TTATTTGCTTACCCATAAGA+AGG + tig0021332:64077-64096 None:intergenic 30.0%
ATACGTAGTAGACTTGAAAT+CGG + tig0021332:64163-64182 None:intergenic 30.0%
! ATTTCAAGTCTACTACGTAT+GGG - tig0021332:64163-64182 Msa1390200:intron 30.0%
ATCATGGAAGTAACAACATA+TGG + tig0021332:64381-64400 None:intergenic 30.0%
GTTGATTACGCATTAGAATT+TGG - tig0021332:64472-64491 Msa1390200:intron 30.0%
GAAATATGAAACCTATAACG+AGG + tig0021332:64568-64587 None:intergenic 30.0%
!! ACTTATGGACAACTACTTTT+TGG - tig0021332:64737-64756 Msa1390200:five_prime_UTR 30.0%
!!! TTTGGTTGGATTTTTTTTGG+TGG - tig0021332:64755-64774 Msa1390200:five_prime_UTR 30.0%
AAAAGATTATAGAGAAGGTG+AGG - tig0021332:60753-60772 Msa1390200:three_prime_UTR 30.0%
TCAAATCGAATCGAATCTTT+AGG - tig0021332:60883-60902 Msa1390200:three_prime_UTR 30.0%
!! TTTTGTTTGTAAGCATGTGA+GGG + tig0021332:61054-61073 None:intergenic 30.0%
!! TTTTTGTTTGTAAGCATGTG+AGG + tig0021332:61055-61074 None:intergenic 30.0%
! ATGATTCTAGAAAAACGTTG+CGG + tig0021332:61195-61214 None:intergenic 30.0%
!!! TAAGTTGATTTTGGGATATG+AGG - tig0021332:61375-61394 Msa1390200:intron 30.0%
CAGAACAGAAAAAATCATCA+TGG + tig0021332:61430-61449 None:intergenic 30.0%
!!! TGTTTTTTGATGGTTGAGTA+TGG - tig0021332:61454-61473 Msa1390200:intron 30.0%
CGCACAAGAATTTAATATCA+TGG + tig0021332:61656-61675 None:intergenic 30.0%
TATGTTCATTATGTCAGGAT+TGG - tig0021332:61729-61748 Msa1390200:intron 30.0%
!! GATTTTTACTTATTTGGGGT+TGG - tig0021332:62095-62114 Msa1390200:intron 30.0%
TCTAAATGGATCCTTGAAAA+TGG + tig0021332:62140-62159 None:intergenic 30.0%
!! TTTTCAAGGATCCATTTAGA+AGG - tig0021332:62140-62159 Msa1390200:CDS 30.0%
TTTCAAGGATCCATTTAGAA+GGG - tig0021332:62141-62160 Msa1390200:CDS 30.0%
ATATTGTTACCCCTTCTAAA+TGG + tig0021332:62154-62173 None:intergenic 30.0%
ATACATTTAAGGACTAACGA+CGG + tig0021332:62248-62267 None:intergenic 30.0%
CAGATGATTCAATATACAAC+AGG + tig0021332:62482-62501 None:intergenic 30.0%
! GTATGATTTGTGATTAGGTA+TGG - tig0021332:62773-62792 Msa1390200:CDS 30.0%
TCTCATATTATTACCACTCA+TGG + tig0021332:62968-62987 None:intergenic 30.0%
! CTCAATTTGAACTTGTCTTT+TGG - tig0021332:63061-63080 Msa1390200:intron 30.0%
! AATAAGTCAAAAAGAGGTGT+TGG + tig0021332:63530-63549 None:intergenic 30.0%
CCATTCAATAAGTCAAAAAG+AGG + tig0021332:63536-63555 None:intergenic 30.0%
!!! CCTCTTTTTGACTTATTGAA+TGG - tig0021332:63533-63552 Msa1390200:intron 30.0%
! CTTTGTTTATGTTCCAATAG+AGG - tig0021332:63590-63609 Msa1390200:intron 30.0%
!!! AGCAAACCTTAATTGGTTTT+GGG + tig0021332:63651-63670 None:intergenic 30.0%
!! TAGCAAACCTTAATTGGTTT+TGG + tig0021332:63652-63671 None:intergenic 30.0%
TGGAAATAGCAAACCTTAAT+TGG + tig0021332:63658-63677 None:intergenic 30.0%
TATATCAATTGGAAAGGAGT+TGG + tig0021332:63721-63740 None:intergenic 30.0%
GACAAGTATATCAATTGGAA+AGG + tig0021332:63727-63746 None:intergenic 30.0%
TGACATTAACACCTTCTTAT+GGG - tig0021332:64063-64082 Msa1390200:intron 30.0%
TTATTTGCTTACCCATAAGA+AGG + tig0021332:64077-64096 None:intergenic 30.0%
ATACGTAGTAGACTTGAAAT+CGG + tig0021332:64163-64182 None:intergenic 30.0%
! ATTTCAAGTCTACTACGTAT+GGG - tig0021332:64163-64182 Msa1390200:intron 30.0%
ATCATGGAAGTAACAACATA+TGG + tig0021332:64381-64400 None:intergenic 30.0%
GTTGATTACGCATTAGAATT+TGG - tig0021332:64472-64491 Msa1390200:intron 30.0%
GAAATATGAAACCTATAACG+AGG + tig0021332:64568-64587 None:intergenic 30.0%
!! ACTTATGGACAACTACTTTT+TGG - tig0021332:64737-64756 Msa1390200:five_prime_UTR 30.0%
!!! TTTGGTTGGATTTTTTTTGG+TGG - tig0021332:64755-64774 Msa1390200:five_prime_UTR 30.0%
TAGGAACAGAAAAACCAACT+AGG - tig0021332:60781-60800 Msa1390200:three_prime_UTR 35.0%
!! GGTCTTATTTATAGCCTAGT+TGG + tig0021332:60798-60817 None:intergenic 35.0%
TTGTTGTGAACAGAGAAATG+AGG + tig0021332:60829-60848 None:intergenic 35.0%
!! CAAGGTTGATAAGATCTGAA+AGG + tig0021332:60968-60987 None:intergenic 35.0%
AAATCATCGCCGAATACATA+TGG - tig0021332:61009-61028 Msa1390200:three_prime_UTR 35.0%
! AGTAGTGTTTTTCGTACGTA+CGG + tig0021332:61127-61146 None:intergenic 35.0%
!! TTTGGGATATGAGGATGTTT+TGG - tig0021332:61384-61403 Msa1390200:intron 35.0%
!!! GTTCTGACTCTGTTTTTTGA+TGG - tig0021332:61444-61463 Msa1390200:intron 35.0%
TATTGTACTTAGTGGTAGAC+TGG + tig0021332:61618-61637 None:intergenic 35.0%
!! TGGTTTGGTATTGTACTTAG+TGG + tig0021332:61626-61645 None:intergenic 35.0%
!! TATCATGGTTTGGTTTGGTT+TGG + tig0021332:61641-61660 None:intergenic 35.0%
ATAACTTCACTATCTTCTCC+AGG + tig0021332:61984-62003 None:intergenic 35.0%
TTCAAGGATCCATTTAGAAG+GGG - tig0021332:62142-62161 Msa1390200:CDS 35.0%
TAGAAGGGGTAACAATATCT+TGG - tig0021332:62156-62175 Msa1390200:CDS 35.0%
GTGTGTCTTGGAAAACATAT+TGG + tig0021332:62354-62373 None:intergenic 35.0%
AGTAGCAACAAAAGATACCA+TGG + tig0021332:62695-62714 None:intergenic 35.0%
ACAGTAAACAAGTGGCAAAA+AGG + tig0021332:62734-62753 None:intergenic 35.0%
ATCAGAACACAGTAAACAAG+TGG + tig0021332:62742-62761 None:intergenic 35.0%
ATTGATGTCTTTCTGCAACA+AGG + tig0021332:62816-62835 None:intergenic 35.0%
TGTTGCAGAAAGACATCAAT+TGG - tig0021332:62816-62835 Msa1390200:intron 35.0%
AATGTGAGTCAACAATGTCA+CGG + tig0021332:63208-63227 None:intergenic 35.0%
ATCAACATCAGTGGAATCAA+TGG - tig0021332:63251-63270 Msa1390200:intron 35.0%
GAAAGTTAGTTAGTTGGAGA+AGG + tig0021332:63571-63590 None:intergenic 35.0%
!!! CTTAATTGGTTTTGGGTCAA+AGG + tig0021332:63644-63663 None:intergenic 35.0%
CTTTGACCCAAAACCAATTA+AGG - tig0021332:63642-63661 Msa1390200:CDS 35.0%
TAACTTGATTCAAACTAGGG+TGG + tig0021332:63678-63697 None:intergenic 35.0%
TAATGCAAAACTAGGGTGAT+TGG - tig0021332:63783-63802 Msa1390200:intron 35.0%
TTGAAAGCAATTGAGAAGCT+TGG - tig0021332:63965-63984 Msa1390200:intron 35.0%
TGAAAGCAATTGAGAAGCTT+GGG - tig0021332:63966-63985 Msa1390200:intron 35.0%
CTGACATTAACACCTTCTTA+TGG - tig0021332:64062-64081 Msa1390200:intron 35.0%
! GATTTCAAGTCTACTACGTA+TGG - tig0021332:64162-64181 Msa1390200:intron 35.0%
! TTTCAAGTCTACTACGTATG+GGG - tig0021332:64164-64183 Msa1390200:intron 35.0%
TATGGATCCATGTTAGATGA+TGG + tig0021332:64363-64382 None:intergenic 35.0%
AAAAATGCCAATGACCATGA+GGG - tig0021332:64669-64688 Msa1390200:five_prime_UTR 35.0%
!!! ATGGACAACTACTTTTTGGT+TGG - tig0021332:64741-64760 Msa1390200:five_prime_UTR 35.0%
!!! GTTGGATTTTTTTTGGTGGT+CGG - tig0021332:64759-64778 Msa1390200:five_prime_UTR 35.0%
!!! TTGGATTTTTTTTGGTGGTC+GGG - tig0021332:64760-64779 Msa1390200:five_prime_UTR 35.0%
CATAATATATGCAAGGTCTG+GGG + tig0021332:64793-64812 None:intergenic 35.0%
GCATAATATATGCAAGGTCT+GGG + tig0021332:64794-64813 None:intergenic 35.0%
TGCATAATATATGCAAGGTC+TGG + tig0021332:64795-64814 None:intergenic 35.0%
TAGGAACAGAAAAACCAACT+AGG - tig0021332:60781-60800 Msa1390200:three_prime_UTR 35.0%
!! GGTCTTATTTATAGCCTAGT+TGG + tig0021332:60798-60817 None:intergenic 35.0%
TTGTTGTGAACAGAGAAATG+AGG + tig0021332:60829-60848 None:intergenic 35.0%
!! CAAGGTTGATAAGATCTGAA+AGG + tig0021332:60968-60987 None:intergenic 35.0%
AAATCATCGCCGAATACATA+TGG - tig0021332:61009-61028 Msa1390200:three_prime_UTR 35.0%
! AGTAGTGTTTTTCGTACGTA+CGG + tig0021332:61127-61146 None:intergenic 35.0%
!! TTTGGGATATGAGGATGTTT+TGG - tig0021332:61384-61403 Msa1390200:intron 35.0%
!!! GTTCTGACTCTGTTTTTTGA+TGG - tig0021332:61444-61463 Msa1390200:intron 35.0%
TATTGTACTTAGTGGTAGAC+TGG + tig0021332:61618-61637 None:intergenic 35.0%
!! TGGTTTGGTATTGTACTTAG+TGG + tig0021332:61626-61645 None:intergenic 35.0%
!! TATCATGGTTTGGTTTGGTT+TGG + tig0021332:61641-61660 None:intergenic 35.0%
ATAACTTCACTATCTTCTCC+AGG + tig0021332:61984-62003 None:intergenic 35.0%
TTCAAGGATCCATTTAGAAG+GGG - tig0021332:62142-62161 Msa1390200:CDS 35.0%
TAGAAGGGGTAACAATATCT+TGG - tig0021332:62156-62175 Msa1390200:CDS 35.0%
GTGTGTCTTGGAAAACATAT+TGG + tig0021332:62354-62373 None:intergenic 35.0%
AGTAGCAACAAAAGATACCA+TGG + tig0021332:62695-62714 None:intergenic 35.0%
ACAGTAAACAAGTGGCAAAA+AGG + tig0021332:62734-62753 None:intergenic 35.0%
ATCAGAACACAGTAAACAAG+TGG + tig0021332:62742-62761 None:intergenic 35.0%
ATTGATGTCTTTCTGCAACA+AGG + tig0021332:62816-62835 None:intergenic 35.0%
TGTTGCAGAAAGACATCAAT+TGG - tig0021332:62816-62835 Msa1390200:intron 35.0%
AATGTGAGTCAACAATGTCA+CGG + tig0021332:63208-63227 None:intergenic 35.0%
ATCAACATCAGTGGAATCAA+TGG - tig0021332:63251-63270 Msa1390200:intron 35.0%
GAAAGTTAGTTAGTTGGAGA+AGG + tig0021332:63571-63590 None:intergenic 35.0%
!!! CTTAATTGGTTTTGGGTCAA+AGG + tig0021332:63644-63663 None:intergenic 35.0%
CTTTGACCCAAAACCAATTA+AGG - tig0021332:63642-63661 Msa1390200:CDS 35.0%
TAACTTGATTCAAACTAGGG+TGG + tig0021332:63678-63697 None:intergenic 35.0%
TAATGCAAAACTAGGGTGAT+TGG - tig0021332:63783-63802 Msa1390200:intron 35.0%
TTGAAAGCAATTGAGAAGCT+TGG - tig0021332:63965-63984 Msa1390200:intron 35.0%
TGAAAGCAATTGAGAAGCTT+GGG - tig0021332:63966-63985 Msa1390200:intron 35.0%
CTGACATTAACACCTTCTTA+TGG - tig0021332:64062-64081 Msa1390200:intron 35.0%
! GATTTCAAGTCTACTACGTA+TGG - tig0021332:64162-64181 Msa1390200:intron 35.0%
! TTTCAAGTCTACTACGTATG+GGG - tig0021332:64164-64183 Msa1390200:intron 35.0%
TATGGATCCATGTTAGATGA+TGG + tig0021332:64363-64382 None:intergenic 35.0%
AAAAATGCCAATGACCATGA+GGG - tig0021332:64669-64688 Msa1390200:five_prime_UTR 35.0%
!!! ATGGACAACTACTTTTTGGT+TGG - tig0021332:64741-64760 Msa1390200:five_prime_UTR 35.0%
!!! GTTGGATTTTTTTTGGTGGT+CGG - tig0021332:64759-64778 Msa1390200:five_prime_UTR 35.0%
!!! TTGGATTTTTTTTGGTGGTC+GGG - tig0021332:64760-64779 Msa1390200:five_prime_UTR 35.0%
CATAATATATGCAAGGTCTG+GGG + tig0021332:64793-64812 None:intergenic 35.0%
GCATAATATATGCAAGGTCT+GGG + tig0021332:64794-64813 None:intergenic 35.0%
TGCATAATATATGCAAGGTC+TGG + tig0021332:64795-64814 None:intergenic 35.0%
!!! GGAGAGACATGTTTTGGTTT+TGG + tig0021332:60947-60966 None:intergenic 40.0%
! CTGAAAGGAGAGACATGTTT+TGG + tig0021332:60953-60972 None:intergenic 40.0%
! GATGATTTTCTCGGTGGTTT+CGG + tig0021332:60997-61016 None:intergenic 40.0%
! GTATTCGGCGATGATTTTCT+CGG + tig0021332:61006-61025 None:intergenic 40.0%
! ATTCTAGAAAAACGTTGCGG+TGG + tig0021332:61192-61211 None:intergenic 40.0%
GTTCATTATGTCAGGATTGG+TGG - tig0021332:61732-61751 Msa1390200:intron 40.0%
GAACCATCATAGTTCCACTT+GGG + tig0021332:61945-61964 None:intergenic 40.0%
! GATCCTTGAAAATGGCTTGT+GGG + tig0021332:62132-62151 None:intergenic 40.0%
AAACATCATCGAGTGTGTCT+TGG + tig0021332:62366-62385 None:intergenic 40.0%
TTCTGATCCCTAAATGTGTG+AGG + tig0021332:62426-62445 None:intergenic 40.0%
ATCAGGATGGCTGAAAATCT+TGG + tig0021332:62657-62676 None:intergenic 40.0%
! ATGTTGTTGCTGAAGTACCA+TGG - tig0021332:62675-62694 Msa1390200:intron 40.0%
! AAAGACATCAATTGGCCTCT+TGG - tig0021332:62824-62843 Msa1390200:intron 40.0%
! TGAAAGTGAGTTTTCACCTG+AGG + tig0021332:62875-62894 None:intergenic 40.0%
CAATAGGGACCATACTATTG+TGG - tig0021332:63158-63177 Msa1390200:intron 40.0%
TACAAAGCCTGTCTTTATGC+CGG - tig0021332:63227-63246 Msa1390200:intron 40.0%
TAAGTCCAACTTACTTGACC+AGG + tig0021332:63287-63306 None:intergenic 40.0%
! ATGTAGTGGGAATTCCAAGT+TGG - tig0021332:63401-63420 Msa1390200:intron 40.0%
!! ATGGGTTGCTCGTTACATTT+TGG - tig0021332:63457-63476 Msa1390200:intron 40.0%
CAAAACTAGGGTGATTGGAA+TGG - tig0021332:63788-63807 Msa1390200:intron 40.0%
!! CTTGGTGCTACAGCATTATA+AGG + tig0021332:63912-63931 None:intergenic 40.0%
ACCAAGTCTATGAGAGAAGA+TGG - tig0021332:63926-63945 Msa1390200:intron 40.0%
ACCATCTTCTCTCATAGACT+TGG + tig0021332:63930-63949 None:intergenic 40.0%
AAGTCTATGAGAGAAGATGG+TGG - tig0021332:63929-63948 Msa1390200:intron 40.0%
TTCAAGTCTACTACGTATGG+GGG - tig0021332:64165-64184 Msa1390200:intron 40.0%
TGTTGTTCTAATTGTTGGCG+TGG - tig0021332:64240-64259 Msa1390200:intron 40.0%
!! CGTGGCTTGTGTTATTTGAA+GGG - tig0021332:64258-64277 Msa1390200:intron 40.0%
! GGAAAGGTTATTTCGAGGAT+AGG - tig0021332:64334-64353 Msa1390200:intron 40.0%
! AAGGTTATTTCGAGGATAGG+AGG - tig0021332:64337-64356 Msa1390200:intron 40.0%
TTATGGTTTCCAGAGAATGG+TGG + tig0021332:64412-64431 None:intergenic 40.0%
TACTTCAATGCATGTGTGTG+TGG + tig0021332:64439-64458 None:intergenic 40.0%
! TGAATTTGAGGCCTCGTTAT+AGG - tig0021332:64554-64573 Msa1390200:intron 40.0%
GAAAAATGCCAATGACCATG+AGG - tig0021332:64668-64687 Msa1390200:five_prime_UTR 40.0%
!!! TGGATTTTTTTTGGTGGTCG+GGG - tig0021332:64761-64780 Msa1390200:five_prime_UTR 40.0%
!!! GGAGAGACATGTTTTGGTTT+TGG + tig0021332:60947-60966 None:intergenic 40.0%
! CTGAAAGGAGAGACATGTTT+TGG + tig0021332:60953-60972 None:intergenic 40.0%
! GATGATTTTCTCGGTGGTTT+CGG + tig0021332:60997-61016 None:intergenic 40.0%
! GTATTCGGCGATGATTTTCT+CGG + tig0021332:61006-61025 None:intergenic 40.0%
! ATTCTAGAAAAACGTTGCGG+TGG + tig0021332:61192-61211 None:intergenic 40.0%
GTTCATTATGTCAGGATTGG+TGG - tig0021332:61732-61751 Msa1390200:intron 40.0%
GAACCATCATAGTTCCACTT+GGG + tig0021332:61945-61964 None:intergenic 40.0%
! GATCCTTGAAAATGGCTTGT+GGG + tig0021332:62132-62151 None:intergenic 40.0%
AAACATCATCGAGTGTGTCT+TGG + tig0021332:62366-62385 None:intergenic 40.0%
TTCTGATCCCTAAATGTGTG+AGG + tig0021332:62426-62445 None:intergenic 40.0%
ATCAGGATGGCTGAAAATCT+TGG + tig0021332:62657-62676 None:intergenic 40.0%
! ATGTTGTTGCTGAAGTACCA+TGG - tig0021332:62675-62694 Msa1390200:intron 40.0%
! AAAGACATCAATTGGCCTCT+TGG - tig0021332:62824-62843 Msa1390200:intron 40.0%
! TGAAAGTGAGTTTTCACCTG+AGG + tig0021332:62875-62894 None:intergenic 40.0%
CAATAGGGACCATACTATTG+TGG - tig0021332:63158-63177 Msa1390200:intron 40.0%
TACAAAGCCTGTCTTTATGC+CGG - tig0021332:63227-63246 Msa1390200:intron 40.0%
TAAGTCCAACTTACTTGACC+AGG + tig0021332:63287-63306 None:intergenic 40.0%
! ATGTAGTGGGAATTCCAAGT+TGG - tig0021332:63401-63420 Msa1390200:intron 40.0%
!! ATGGGTTGCTCGTTACATTT+TGG - tig0021332:63457-63476 Msa1390200:intron 40.0%
CAAAACTAGGGTGATTGGAA+TGG - tig0021332:63788-63807 Msa1390200:intron 40.0%
!! CTTGGTGCTACAGCATTATA+AGG + tig0021332:63912-63931 None:intergenic 40.0%
ACCAAGTCTATGAGAGAAGA+TGG - tig0021332:63926-63945 Msa1390200:intron 40.0%
ACCATCTTCTCTCATAGACT+TGG + tig0021332:63930-63949 None:intergenic 40.0%
AAGTCTATGAGAGAAGATGG+TGG - tig0021332:63929-63948 Msa1390200:intron 40.0%
TTCAAGTCTACTACGTATGG+GGG - tig0021332:64165-64184 Msa1390200:intron 40.0%
TGTTGTTCTAATTGTTGGCG+TGG - tig0021332:64240-64259 Msa1390200:intron 40.0%
!! CGTGGCTTGTGTTATTTGAA+GGG - tig0021332:64258-64277 Msa1390200:intron 40.0%
! GGAAAGGTTATTTCGAGGAT+AGG - tig0021332:64334-64353 Msa1390200:intron 40.0%
! AAGGTTATTTCGAGGATAGG+AGG - tig0021332:64337-64356 Msa1390200:intron 40.0%
TTATGGTTTCCAGAGAATGG+TGG + tig0021332:64412-64431 None:intergenic 40.0%
TACTTCAATGCATGTGTGTG+TGG + tig0021332:64439-64458 None:intergenic 40.0%
! TGAATTTGAGGCCTCGTTAT+AGG - tig0021332:64554-64573 Msa1390200:intron 40.0%
GAAAAATGCCAATGACCATG+AGG - tig0021332:64668-64687 Msa1390200:five_prime_UTR 40.0%
!!! TGGATTTTTTTTGGTGGTCG+GGG - tig0021332:64761-64780 Msa1390200:five_prime_UTR 40.0%
TAGAGAAGGTGAGGAAGACT+AGG - tig0021332:60762-60781 Msa1390200:three_prime_UTR 45.0%
ACAGAGAAATGAGGCAGTGT+GGG + tig0021332:60820-60839 None:intergenic 45.0%
AACAGAGAAATGAGGCAGTG+TGG + tig0021332:60821-60840 None:intergenic 45.0%
AGTGGTAGACTGGTAGGTTT+GGG + tig0021332:61608-61627 None:intergenic 45.0%
TAGTGGTAGACTGGTAGGTT+TGG + tig0021332:61609-61628 None:intergenic 45.0%
GTACTTAGTGGTAGACTGGT+AGG + tig0021332:61614-61633 None:intergenic 45.0%
! TATGTCAGGATTGGTGGATC+TGG - tig0021332:61738-61757 Msa1390200:intron 45.0%
CTTCCCAAGTGGAACTATGA+TGG - tig0021332:61939-61958 Msa1390200:CDS 45.0%
GGAACCATCATAGTTCCACT+TGG + tig0021332:61946-61965 None:intergenic 45.0%
AACTATGATGGTTCCAGCAC+AGG - tig0021332:61951-61970 Msa1390200:CDS 45.0%
GGATCCTTGAAAATGGCTTG+TGG + tig0021332:62133-62152 None:intergenic 45.0%
ATGTGTGAGGCGTGTCAATA+TGG + tig0021332:62413-62432 None:intergenic 45.0%
TTGACACGCCTCACACATTT+AGG - tig0021332:62415-62434 Msa1390200:CDS 45.0%
TGACACGCCTCACACATTTA+GGG - tig0021332:62416-62435 Msa1390200:intron 45.0%
CTATTGCGAGTTTATGCAGC+TGG - tig0021332:62521-62540 Msa1390200:intron 45.0%
!! TGCAGCTGGTCTTGTTTCAT+TGG - tig0021332:62535-62554 Msa1390200:intron 45.0%
! TGTCTCTTGTTGGTGGGAAT+GGG + tig0021332:62626-62645 None:intergenic 45.0%
! ATGTCTCTTGTTGGTGGGAA+TGG + tig0021332:62627-62646 None:intergenic 45.0%
CTTCAGCAACAACATCAGGA+TGG + tig0021332:62670-62689 None:intergenic 45.0%
GGTACTTCAGCAACAACATC+AGG + tig0021332:62674-62693 None:intergenic 45.0%
! ACATCAATTGGCCTCTTGGT+TGG - tig0021332:62828-62847 Msa1390200:intron 45.0%
GAAAATGGTGTGACCATGAG+TGG - tig0021332:62952-62971 Msa1390200:CDS 45.0%
GATTCCACTGATGTTGATGC+CGG + tig0021332:63249-63268 None:intergenic 45.0%
ATCAATGGTGAAGTGATGCC+TGG - tig0021332:63266-63285 Msa1390200:intron 45.0%
TGATGCCTGGTCAAGTAAGT+TGG - tig0021332:63279-63298 Msa1390200:intron 45.0%
! TCTCTGCTGGTGATGAGATA+TGG - tig0021332:63438-63457 Msa1390200:intron 45.0%
! CTCTGCTGGTGATGAGATAT+GGG - tig0021332:63439-63458 Msa1390200:intron 45.0%
! GGTTGCTCGTTACATTTTGG+AGG - tig0021332:63460-63479 Msa1390200:intron 45.0%
!! GCTCGTTACATTTTGGAGGT+AGG - tig0021332:63464-63483 Msa1390200:intron 45.0%
!! CGTTACATTTTGGAGGTAGG+TGG - tig0021332:63467-63486 Msa1390200:intron 45.0%
GTTCCAATAGAGGATCACTG+AGG - tig0021332:63600-63619 Msa1390200:CDS 45.0%
CAACCTCAGTGATCCTCTAT+TGG + tig0021332:63606-63625 None:intergenic 45.0%
CTGGTGCTCACACAAATTAC+AGG - tig0021332:63813-63832 Msa1390200:CDS 45.0%
! AAGGAGCACATTGCTGCTTA+TGG - tig0021332:63998-64017 Msa1390200:intron 45.0%
! CACATTGCTGCTTATGGAGA+AGG - tig0021332:64004-64023 Msa1390200:intron 45.0%
TCAAGTCTACTACGTATGGG+GGG - tig0021332:64166-64185 Msa1390200:intron 45.0%
!! GCGTGGCTTGTGTTATTTGA+AGG - tig0021332:64257-64276 Msa1390200:intron 45.0%
!! TGCGTCGATTAGAGTTGGAA+GGG - tig0021332:64296-64315 Msa1390200:intron 45.0%
! AGCAGGGAAAGGTTATTTCG+AGG - tig0021332:64329-64348 Msa1390200:intron 45.0%
TAGGAGGCCATCATCTAACA+TGG - tig0021332:64353-64372 Msa1390200:intron 45.0%
! AATGGTGGTGTCTGCAATCA+TGG + tig0021332:64397-64416 None:intergenic 45.0%
GGCTTATGGTTTCCAGAGAA+TGG + tig0021332:64415-64434 None:intergenic 45.0%
TTCAATGCATGTGTGTGTGG+TGG + tig0021332:64436-64455 None:intergenic 45.0%
TAGAGAAGGTGAGGAAGACT+AGG - tig0021332:60762-60781 Msa1390200:three_prime_UTR 45.0%
ACAGAGAAATGAGGCAGTGT+GGG + tig0021332:60820-60839 None:intergenic 45.0%
AACAGAGAAATGAGGCAGTG+TGG + tig0021332:60821-60840 None:intergenic 45.0%
AGTGGTAGACTGGTAGGTTT+GGG + tig0021332:61608-61627 None:intergenic 45.0%
TAGTGGTAGACTGGTAGGTT+TGG + tig0021332:61609-61628 None:intergenic 45.0%
GTACTTAGTGGTAGACTGGT+AGG + tig0021332:61614-61633 None:intergenic 45.0%
! TATGTCAGGATTGGTGGATC+TGG - tig0021332:61738-61757 Msa1390200:intron 45.0%
CTTCCCAAGTGGAACTATGA+TGG - tig0021332:61939-61958 Msa1390200:CDS 45.0%
GGAACCATCATAGTTCCACT+TGG + tig0021332:61946-61965 None:intergenic 45.0%
AACTATGATGGTTCCAGCAC+AGG - tig0021332:61951-61970 Msa1390200:CDS 45.0%
GGATCCTTGAAAATGGCTTG+TGG + tig0021332:62133-62152 None:intergenic 45.0%
ATGTGTGAGGCGTGTCAATA+TGG + tig0021332:62413-62432 None:intergenic 45.0%
TTGACACGCCTCACACATTT+AGG - tig0021332:62415-62434 Msa1390200:CDS 45.0%
TGACACGCCTCACACATTTA+GGG - tig0021332:62416-62435 Msa1390200:intron 45.0%
CTATTGCGAGTTTATGCAGC+TGG - tig0021332:62521-62540 Msa1390200:intron 45.0%
!! TGCAGCTGGTCTTGTTTCAT+TGG - tig0021332:62535-62554 Msa1390200:intron 45.0%
! TGTCTCTTGTTGGTGGGAAT+GGG + tig0021332:62626-62645 None:intergenic 45.0%
! ATGTCTCTTGTTGGTGGGAA+TGG + tig0021332:62627-62646 None:intergenic 45.0%
CTTCAGCAACAACATCAGGA+TGG + tig0021332:62670-62689 None:intergenic 45.0%
GGTACTTCAGCAACAACATC+AGG + tig0021332:62674-62693 None:intergenic 45.0%
! ACATCAATTGGCCTCTTGGT+TGG - tig0021332:62828-62847 Msa1390200:intron 45.0%
GAAAATGGTGTGACCATGAG+TGG - tig0021332:62952-62971 Msa1390200:CDS 45.0%
GATTCCACTGATGTTGATGC+CGG + tig0021332:63249-63268 None:intergenic 45.0%
ATCAATGGTGAAGTGATGCC+TGG - tig0021332:63266-63285 Msa1390200:intron 45.0%
TGATGCCTGGTCAAGTAAGT+TGG - tig0021332:63279-63298 Msa1390200:intron 45.0%
! TCTCTGCTGGTGATGAGATA+TGG - tig0021332:63438-63457 Msa1390200:intron 45.0%
! CTCTGCTGGTGATGAGATAT+GGG - tig0021332:63439-63458 Msa1390200:intron 45.0%
! GGTTGCTCGTTACATTTTGG+AGG - tig0021332:63460-63479 Msa1390200:intron 45.0%
!! GCTCGTTACATTTTGGAGGT+AGG - tig0021332:63464-63483 Msa1390200:intron 45.0%
!! CGTTACATTTTGGAGGTAGG+TGG - tig0021332:63467-63486 Msa1390200:intron 45.0%
GTTCCAATAGAGGATCACTG+AGG - tig0021332:63600-63619 Msa1390200:CDS 45.0%
CAACCTCAGTGATCCTCTAT+TGG + tig0021332:63606-63625 None:intergenic 45.0%
CTGGTGCTCACACAAATTAC+AGG - tig0021332:63813-63832 Msa1390200:CDS 45.0%
! AAGGAGCACATTGCTGCTTA+TGG - tig0021332:63998-64017 Msa1390200:intron 45.0%
! CACATTGCTGCTTATGGAGA+AGG - tig0021332:64004-64023 Msa1390200:intron 45.0%
TCAAGTCTACTACGTATGGG+GGG - tig0021332:64166-64185 Msa1390200:intron 45.0%
!! GCGTGGCTTGTGTTATTTGA+AGG - tig0021332:64257-64276 Msa1390200:intron 45.0%
!! TGCGTCGATTAGAGTTGGAA+GGG - tig0021332:64296-64315 Msa1390200:intron 45.0%
! AGCAGGGAAAGGTTATTTCG+AGG - tig0021332:64329-64348 Msa1390200:intron 45.0%
TAGGAGGCCATCATCTAACA+TGG - tig0021332:64353-64372 Msa1390200:intron 45.0%
! AATGGTGGTGTCTGCAATCA+TGG + tig0021332:64397-64416 None:intergenic 45.0%
GGCTTATGGTTTCCAGAGAA+TGG + tig0021332:64415-64434 None:intergenic 45.0%
TTCAATGCATGTGTGTGTGG+TGG + tig0021332:64436-64455 None:intergenic 45.0%
!! ATAAAAAAAAAAAATAATCA+TGG + tig0021332:61233-61252 None:intergenic 5.0%
!! ATAAAAAAAAAAAATAATCA+TGG + tig0021332:61233-61252 None:intergenic 5.0%
CAGAGAAATGAGGCAGTGTG+GGG + tig0021332:60819-60838 None:intergenic 50.0%
! TTTTCTCGGTGGTTTCGGAG+AGG + tig0021332:60992-61011 None:intergenic 50.0%
! TTCGGCGATGATTTTCTCGG+TGG + tig0021332:61003-61022 None:intergenic 50.0%
! CAGGATTGGTGGATCTGGTT+TGG - tig0021332:61743-61762 Msa1390200:intron 50.0%
!! GTGGATCTGGTTTGGACTTG+AGG - tig0021332:61751-61770 Msa1390200:intron 50.0%
TGGACTTGAGGAGCAAAGCA+AGG - tig0021332:61763-61782 Msa1390200:intron 50.0%
GGACTTGAGGAGCAAAGCAA+GGG - tig0021332:61764-61783 Msa1390200:CDS 50.0%
!! TTTTGGGTGCAGACTCTACC+AGG - tig0021332:61894-61913 Msa1390200:intron 50.0%
AGCTGTGAAGGGTCAGTAAC+TGG + tig0021332:61921-61940 None:intergenic 50.0%
TCCACTTGGGAAGCTGTGAA+GGG + tig0021332:61932-61951 None:intergenic 50.0%
TTCCACTTGGGAAGCTGTGA+AGG + tig0021332:61933-61952 None:intergenic 50.0%
!! CAGCCCACAAGCCATTTTCA+AGG - tig0021332:62126-62145 Msa1390200:CDS 50.0%
TGTGATGCATACACTCCAGC+TGG - tig0021332:62596-62615 Msa1390200:intron 50.0%
GCTGCATGTCTCTTGTTGGT+GGG + tig0021332:62632-62651 None:intergenic 50.0%
AGCTGCATGTCTCTTGTTGG+TGG + tig0021332:62633-62652 None:intergenic 50.0%
! TGAGTTTTCACCTGAGGTCC+AGG + tig0021332:62869-62888 None:intergenic 50.0%
GGACCATACTATTGTGGTGC+TGG - tig0021332:63164-63183 Msa1390200:intron 50.0%
GCACCAGCACCACAATAGTA+TGG + tig0021332:63170-63189 None:intergenic 50.0%
GTTGATGCCGGCATAAAGAC+AGG + tig0021332:63237-63256 None:intergenic 50.0%
TATGCCGGCATCAACATCAG+TGG - tig0021332:63242-63261 Msa1390200:intron 50.0%
!! TTCCAAGTTGGTCCCTCAGT+TGG - tig0021332:63413-63432 Msa1390200:intron 50.0%
TACCAACTGAGGGACCAACT+TGG + tig0021332:63418-63437 None:intergenic 50.0%
CCAGCAGAGATACCAACTGA+GGG + tig0021332:63428-63447 None:intergenic 50.0%
ACCAGCAGAGATACCAACTG+AGG + tig0021332:63429-63448 None:intergenic 50.0%
TAGAGGATCACTGAGGTTGC+TGG - tig0021332:63607-63626 Msa1390200:CDS 50.0%
TAGGGTGATTGGAATGGTGC+TGG - tig0021332:63794-63813 Msa1390200:intron 50.0%
! GAAGCTTGGGAAGAAGCACA+AGG - tig0021332:63979-63998 Msa1390200:intron 50.0%
GCAACGAGCGTAGATTGACA+GGG - tig0021332:64026-64045 Msa1390200:intron 50.0%
CAAGTCTACTACGTATGGGG+GGG - tig0021332:64167-64186 Msa1390200:intron 50.0%
!! TTGAAGGGTGTTGCAAACCG+TGG - tig0021332:64273-64292 Msa1390200:intron 50.0%
CAACTCTAATCGACGCACCA+CGG + tig0021332:64293-64312 None:intergenic 50.0%
!! GTGCGTCGATTAGAGTTGGA+AGG - tig0021332:64295-64314 Msa1390200:intron 50.0%
GAAGGGACACAGAGAAAGCA+GGG - tig0021332:64313-64332 Msa1390200:intron 50.0%
GACACAGAGAAAGCAGGGAA+AGG - tig0021332:64318-64337 Msa1390200:intron 50.0%
TTGCAGACACCACCATTCTC+TGG - tig0021332:64400-64419 Msa1390200:intron 50.0%
CATGTGTGTGTGGTGGCTTA+TGG + tig0021332:64429-64448 None:intergenic 50.0%
CCTTCTTCCCTCATGGTCAT+TGG + tig0021332:64679-64698 None:intergenic 50.0%
CCAATGACCATGAGGGAAGA+AGG - tig0021332:64676-64695 Msa1390200:five_prime_UTR 50.0%
ATTCCTGCCTTCTTCCCTCA+TGG + tig0021332:64686-64705 None:intergenic 50.0%
TTGTGAGCTGCTCAGTTGGT+AGG + tig0021332:64823-64842 None:intergenic 50.0%
TACCAACTGAGCAGCTCACA+AGG - tig0021332:64822-64841 Msa1390200:five_prime_UTR 50.0%
CAGAGAAATGAGGCAGTGTG+GGG + tig0021332:60819-60838 None:intergenic 50.0%
! TTTTCTCGGTGGTTTCGGAG+AGG + tig0021332:60992-61011 None:intergenic 50.0%
! TTCGGCGATGATTTTCTCGG+TGG + tig0021332:61003-61022 None:intergenic 50.0%
! CAGGATTGGTGGATCTGGTT+TGG - tig0021332:61743-61762 Msa1390200:intron 50.0%
!! GTGGATCTGGTTTGGACTTG+AGG - tig0021332:61751-61770 Msa1390200:intron 50.0%
TGGACTTGAGGAGCAAAGCA+AGG - tig0021332:61763-61782 Msa1390200:intron 50.0%
GGACTTGAGGAGCAAAGCAA+GGG - tig0021332:61764-61783 Msa1390200:CDS 50.0%
!! TTTTGGGTGCAGACTCTACC+AGG - tig0021332:61894-61913 Msa1390200:intron 50.0%
AGCTGTGAAGGGTCAGTAAC+TGG + tig0021332:61921-61940 None:intergenic 50.0%
TCCACTTGGGAAGCTGTGAA+GGG + tig0021332:61932-61951 None:intergenic 50.0%
TTCCACTTGGGAAGCTGTGA+AGG + tig0021332:61933-61952 None:intergenic 50.0%
!! CAGCCCACAAGCCATTTTCA+AGG - tig0021332:62126-62145 Msa1390200:CDS 50.0%
TGTGATGCATACACTCCAGC+TGG - tig0021332:62596-62615 Msa1390200:intron 50.0%
GCTGCATGTCTCTTGTTGGT+GGG + tig0021332:62632-62651 None:intergenic 50.0%
AGCTGCATGTCTCTTGTTGG+TGG + tig0021332:62633-62652 None:intergenic 50.0%
! TGAGTTTTCACCTGAGGTCC+AGG + tig0021332:62869-62888 None:intergenic 50.0%
GGACCATACTATTGTGGTGC+TGG - tig0021332:63164-63183 Msa1390200:intron 50.0%
GCACCAGCACCACAATAGTA+TGG + tig0021332:63170-63189 None:intergenic 50.0%
GTTGATGCCGGCATAAAGAC+AGG + tig0021332:63237-63256 None:intergenic 50.0%
TATGCCGGCATCAACATCAG+TGG - tig0021332:63242-63261 Msa1390200:intron 50.0%
!! TTCCAAGTTGGTCCCTCAGT+TGG - tig0021332:63413-63432 Msa1390200:intron 50.0%
TACCAACTGAGGGACCAACT+TGG + tig0021332:63418-63437 None:intergenic 50.0%
CCAGCAGAGATACCAACTGA+GGG + tig0021332:63428-63447 None:intergenic 50.0%
ACCAGCAGAGATACCAACTG+AGG + tig0021332:63429-63448 None:intergenic 50.0%
TAGAGGATCACTGAGGTTGC+TGG - tig0021332:63607-63626 Msa1390200:CDS 50.0%
TAGGGTGATTGGAATGGTGC+TGG - tig0021332:63794-63813 Msa1390200:intron 50.0%
! GAAGCTTGGGAAGAAGCACA+AGG - tig0021332:63979-63998 Msa1390200:intron 50.0%
GCAACGAGCGTAGATTGACA+GGG - tig0021332:64026-64045 Msa1390200:intron 50.0%
CAAGTCTACTACGTATGGGG+GGG - tig0021332:64167-64186 Msa1390200:intron 50.0%
!! TTGAAGGGTGTTGCAAACCG+TGG - tig0021332:64273-64292 Msa1390200:intron 50.0%
CAACTCTAATCGACGCACCA+CGG + tig0021332:64293-64312 None:intergenic 50.0%
!! GTGCGTCGATTAGAGTTGGA+AGG - tig0021332:64295-64314 Msa1390200:intron 50.0%
GAAGGGACACAGAGAAAGCA+GGG - tig0021332:64313-64332 Msa1390200:intron 50.0%
GACACAGAGAAAGCAGGGAA+AGG - tig0021332:64318-64337 Msa1390200:intron 50.0%
TTGCAGACACCACCATTCTC+TGG - tig0021332:64400-64419 Msa1390200:intron 50.0%
CATGTGTGTGTGGTGGCTTA+TGG + tig0021332:64429-64448 None:intergenic 50.0%
CCTTCTTCCCTCATGGTCAT+TGG + tig0021332:64679-64698 None:intergenic 50.0%
CCAATGACCATGAGGGAAGA+AGG - tig0021332:64676-64695 Msa1390200:five_prime_UTR 50.0%
ATTCCTGCCTTCTTCCCTCA+TGG + tig0021332:64686-64705 None:intergenic 50.0%
TTGTGAGCTGCTCAGTTGGT+AGG + tig0021332:64823-64842 None:intergenic 50.0%
TACCAACTGAGCAGCTCACA+AGG - tig0021332:64822-64841 Msa1390200:five_prime_UTR 50.0%
GAAGGGTCAGTAACTGGACC+TGG + tig0021332:61915-61934 None:intergenic 55.0%
ACCCTTCACAGCTTCCCAAG+TGG - tig0021332:61928-61947 Msa1390200:intron 55.0%
GGCAGCTGCATGTCTCTTGT+TGG + tig0021332:62636-62655 None:intergenic 55.0%
!!! TGGCCAGTTGGTGGTTTTCC+TGG - tig0021332:62848-62867 Msa1390200:intron 55.0%
GGTCCAGGAAAACCACCAAC+TGG + tig0021332:62854-62873 None:intergenic 55.0%
! TGGTGGTTTTCCTGGACCTC+AGG - tig0021332:62856-62875 Msa1390200:intron 55.0%
!! TTGTGGTGCTGGTGCTGACA+AGG - tig0021332:63175-63194 Msa1390200:intron 55.0%
!! GCTGGTGCTGACAAGGCATT+TGG - tig0021332:63182-63201 Msa1390200:intron 55.0%
! CCCTCAGTTGGTATCTCTGC+TGG - tig0021332:63425-63444 Msa1390200:intron 55.0%
GATCACTGAGGTTGCTGGTG+TGG - tig0021332:63612-63631 Msa1390200:CDS 55.0%
GGCAACGAGCGTAGATTGAC+AGG - tig0021332:64025-64044 Msa1390200:intron 55.0%
! ACGTATGGGGGGGATTAGTG+CGG - tig0021332:64177-64196 Msa1390200:intron 55.0%
!! CGTGGTGCGTCGATTAGAGT+TGG - tig0021332:64291-64310 Msa1390200:intron 55.0%
GGAAGGGACACAGAGAAAGC+AGG - tig0021332:64312-64331 Msa1390200:intron 55.0%
TGACCATGAGGGAAGAAGGC+AGG - tig0021332:64680-64699 Msa1390200:five_prime_UTR 55.0%
GTCCTTGTGAGCTGCTCAGT+TGG + tig0021332:64827-64846 None:intergenic 55.0%
GAAGGGTCAGTAACTGGACC+TGG + tig0021332:61915-61934 None:intergenic 55.0%
ACCCTTCACAGCTTCCCAAG+TGG - tig0021332:61928-61947 Msa1390200:intron 55.0%
GGCAGCTGCATGTCTCTTGT+TGG + tig0021332:62636-62655 None:intergenic 55.0%
!!! TGGCCAGTTGGTGGTTTTCC+TGG - tig0021332:62848-62867 Msa1390200:intron 55.0%
GGTCCAGGAAAACCACCAAC+TGG + tig0021332:62854-62873 None:intergenic 55.0%
! TGGTGGTTTTCCTGGACCTC+AGG - tig0021332:62856-62875 Msa1390200:intron 55.0%
!! TTGTGGTGCTGGTGCTGACA+AGG - tig0021332:63175-63194 Msa1390200:intron 55.0%
!! GCTGGTGCTGACAAGGCATT+TGG - tig0021332:63182-63201 Msa1390200:intron 55.0%
! CCCTCAGTTGGTATCTCTGC+TGG - tig0021332:63425-63444 Msa1390200:intron 55.0%
GATCACTGAGGTTGCTGGTG+TGG - tig0021332:63612-63631 Msa1390200:CDS 55.0%
GGCAACGAGCGTAGATTGAC+AGG - tig0021332:64025-64044 Msa1390200:intron 55.0%
! ACGTATGGGGGGGATTAGTG+CGG - tig0021332:64177-64196 Msa1390200:intron 55.0%
!! CGTGGTGCGTCGATTAGAGT+TGG - tig0021332:64291-64310 Msa1390200:intron 55.0%
GGAAGGGACACAGAGAAAGC+AGG - tig0021332:64312-64331 Msa1390200:intron 55.0%
TGACCATGAGGGAAGAAGGC+AGG - tig0021332:64680-64699 Msa1390200:five_prime_UTR 55.0%
GTCCTTGTGAGCTGCTCAGT+TGG + tig0021332:64827-64846 None:intergenic 55.0%
CGGTGGTTTCGGAGAGGTCA+AGG + tig0021332:60986-61005 None:intergenic 60.0%
TCCAGCACAGGTCAAGCTCC+TGG - tig0021332:61963-61982 Msa1390200:CDS 60.0%
TCCAGGAGCTTGACCTGTGC+TGG + tig0021332:61967-61986 None:intergenic 60.0%
! GTGGGAATGGGTTCTCCAGC+TGG + tig0021332:62614-62633 None:intergenic 60.0%
! TGGCCTCTTGGTTGGCCAGT+TGG - tig0021332:62836-62855 Msa1390200:intron 60.0%
CCACCAACTGGCCAACCAAG+AGG + tig0021332:62842-62861 None:intergenic 60.0%
! CCTCTTGGTTGGCCAGTTGG+TGG - tig0021332:62839-62858 Msa1390200:intron 60.0%
! ATGGGGGGGATTAGTGCGGT+TGG - tig0021332:64181-64200 Msa1390200:intron 60.0%
! TGGGGGGGATTAGTGCGGTT+GGG - tig0021332:64182-64201 Msa1390200:intron 60.0%
CGGTGGTTTCGGAGAGGTCA+AGG + tig0021332:60986-61005 None:intergenic 60.0%
TCCAGCACAGGTCAAGCTCC+TGG - tig0021332:61963-61982 Msa1390200:CDS 60.0%
TCCAGGAGCTTGACCTGTGC+TGG + tig0021332:61967-61986 None:intergenic 60.0%
! GTGGGAATGGGTTCTCCAGC+TGG + tig0021332:62614-62633 None:intergenic 60.0%
! TGGCCTCTTGGTTGGCCAGT+TGG - tig0021332:62836-62855 Msa1390200:intron 60.0%
CCACCAACTGGCCAACCAAG+AGG + tig0021332:62842-62861 None:intergenic 60.0%
! CCTCTTGGTTGGCCAGTTGG+TGG - tig0021332:62839-62858 Msa1390200:intron 60.0%
! ATGGGGGGGATTAGTGCGGT+TGG - tig0021332:64181-64200 Msa1390200:intron 60.0%
! TGGGGGGGATTAGTGCGGTT+GGG - tig0021332:64182-64201 Msa1390200:intron 60.0%
! GGGGGGGATTAGTGCGGTTG+GGG - tig0021332:64183-64202 Msa1390200:intron 65.0%
! GGGGGGGATTAGTGCGGTTG+GGG - tig0021332:64183-64202 Msa1390200:intron 65.0%
Chromosome Type Strat End Strand Name
tig0021332 gene 60752 64846 60752 ID=Msa1390200;Name=Msa1390200
tig0021332 mRNA 60752 64846 60752 ID=Msa1390200-mRNA-1;Parent=Msa1390200;Name=Msa1390200-mRNA-1;_AED=0.13;_eAED=0.13;_QI=205|0.9|0.90|1|1|1|11|415|336
tig0021332 exon 60752 61319 60752 ID=Msa1390200-mRNA-1:exon:12068;Parent=Msa1390200-mRNA-1
tig0021332 exon 61514 61673 61514 ID=Msa1390200-mRNA-1:exon:12067;Parent=Msa1390200-mRNA-1
tig0021332 exon 61764 61801 61764 ID=Msa1390200-mRNA-1:exon:12066;Parent=Msa1390200-mRNA-1
tig0021332 exon 61935 61988 61935 ID=Msa1390200-mRNA-1:exon:12065;Parent=Msa1390200-mRNA-1
tig0021332 exon 62117 62191 62117 ID=Msa1390200-mRNA-1:exon:12064;Parent=Msa1390200-mRNA-1
tig0021332 exon 62306 62434 62306 ID=Msa1390200-mRNA-1:exon:12063;Parent=Msa1390200-mRNA-1
tig0021332 exon 62721 62808 62721 ID=Msa1390200-mRNA-1:exon:12062;Parent=Msa1390200-mRNA-1
tig0021332 exon 62902 63008 62902 ID=Msa1390200-mRNA-1:exon:12061;Parent=Msa1390200-mRNA-1
tig0021332 exon 63600 63692 63600 ID=Msa1390200-mRNA-1:exon:12060;Parent=Msa1390200-mRNA-1
tig0021332 exon 63813 63852 63813 ID=Msa1390200-mRNA-1:exon:12059;Parent=Msa1390200-mRNA-1
tig0021332 exon 64568 64846 64568 ID=Msa1390200-mRNA-1:exon:12058;Parent=Msa1390200-mRNA-1
tig0021332 five_prime_UTR 64642 64846 64642 ID=Msa1390200-mRNA-1:five_prime_utr;Parent=Msa1390200-mRNA-1
tig0021332 CDS 64568 64641 64568 ID=Msa1390200-mRNA-1:cds;Parent=Msa1390200-mRNA-1
tig0021332 CDS 63813 63852 63813 ID=Msa1390200-mRNA-1:cds;Parent=Msa1390200-mRNA-1
tig0021332 CDS 63600 63692 63600 ID=Msa1390200-mRNA-1:cds;Parent=Msa1390200-mRNA-1
tig0021332 CDS 62902 63008 62902 ID=Msa1390200-mRNA-1:cds;Parent=Msa1390200-mRNA-1
tig0021332 CDS 62721 62808 62721 ID=Msa1390200-mRNA-1:cds;Parent=Msa1390200-mRNA-1
tig0021332 CDS 62306 62434 62306 ID=Msa1390200-mRNA-1:cds;Parent=Msa1390200-mRNA-1
tig0021332 CDS 62117 62191 62117 ID=Msa1390200-mRNA-1:cds;Parent=Msa1390200-mRNA-1
tig0021332 CDS 61935 61988 61935 ID=Msa1390200-mRNA-1:cds;Parent=Msa1390200-mRNA-1
tig0021332 CDS 61764 61801 61764 ID=Msa1390200-mRNA-1:cds;Parent=Msa1390200-mRNA-1
tig0021332 CDS 61514 61673 61514 ID=Msa1390200-mRNA-1:cds;Parent=Msa1390200-mRNA-1
tig0021332 CDS 61167 61319 61167 ID=Msa1390200-mRNA-1:cds;Parent=Msa1390200-mRNA-1
tig0021332 three_prime_UTR 60752 61166 60752 ID=Msa1390200-mRNA-1:three_prime_utr;Parent=Msa1390200-mRNA-1
Gene Sequence

>Msa1390200

ATGTCTCTCCTTTCAGATCTTATCAACCTTGACCTCTCCGAAACCACCGAGAAAATCATCGCCGAATACATATGGATTGGTGGATCTGGTTTGGACTTGAGGAGCAAAGCAAGGACTCTACCAGGTCCAGTTACTGACCCTTCACAGCTTCCCAAGTGGAACTATGATGGTTCCAGCACAGGTCAAGCTCCTGGAGAAGATAGTGAAGTTATGTGTGATGCATACACTCCAGCTGGAGAACCCATTCCCACCAACAAGAGACATGCAGCTGCCAAGATTTTCAGCCATCCTGATGTTGTTGCTGAAGTACCATGGTATGGTATTGAGCAAGAATACACCTTGTTGCAGAAAGACATCAATTGGCCTCTTGGTTGGCCAGTTGGTGGTTTTCCTGGACCTCAGGGACCATACTATTGTGGTGCTGGTGCTGACAAGGCATTTGGCCGTGACATTGTTGACTCACATTACAAAGCCTGTCTTTATGCCGGCATCAACATCAGTGGAATCAATGGTGAAGTGATGCCTGGTCAATGGGAATTCCAAGTTGGTCCCTCAGTTGGTATCTCTGCTGGTGATGAGATATGGGTTGCTCGTTACATTTTGGAGAGGATCACTGAGGTTGCTGGTGTGGTGCTTTCCTTTGACCCAAAACCAATTAAGGGTGATTGGAATGGTGCTGGTGCTCACACAAATTACAGCACCAAGTCTATGAGAGAAGATGGTGGCTATGAAGTCATCTTGAAAGCAATTGAGAAGCTTGGGAAGAAGCACAAGGAGCACATTGCTGCTTATGGAGAAGGCAACGAGCGTAGATTGACAGGGCGACATGAGACAGCTGACATTAACACCTTCTTATGGGGTGTTGCAAACCGTGGTGCGTCGATTAGAGTTGGAAGGGACACAGAGAAAGCAGGGAAAGGTTATTTCGAGGATAGGAGGCCATCATCTAACATGGATCCATATGTTGTTACTTCCATGATTGCAGACACCACCATTCTCTGGAAACCATAA

Protein sequence

>Msa1390200

MSLLSDLINLDLSETTEKIIAEYIWIGGSGLDLRSKARTLPGPVTDPSQLPKWNYDGSSTGQAPGEDSEVMCDAYTPAGEPIPTNKRHAAAKIFSHPDVVAEVPWYGIEQEYTLLQKDINWPLGWPVGGFPGPQGPYYCGAGADKAFGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISAGDEIWVARYILERITEVAGVVLSFDPKPIKGDWNGAGAHTNYSTKSMREDGGYEVILKAIEKLGKKHKEHIAAYGEGNERRLTGRHETADINTFLWGVANRGASIRVGRDTEKAGKGYFEDRRPSSNMDPYVVTSMIADTTILWKP*