Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1374720 | XP_003603302.1 | 96.025 | 805 | 29 | 1 | 1 | 805 | 1 | 802 | 0.0 | 1550 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1374720 | sp|Q8GUP3|PDS5C_ARATH | 39.948 | 776 | 330 | 23 | 1 | 678 | 1 | 738 | 1.41e-136 | 429 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1374720 | G7J9V3 | 96.025 | 805 | 29 | 1 | 1 | 805 | 1 | 802 | 0.0 | 1550 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003720 | Msa1374720 | 0.846305 | 2.361157e-59 | -8.615850e-47 |
| Msa0051020 | Msa1374720 | 0.805034 | 1.621817e-49 | -8.615850e-47 |
| Msa0054440 | Msa1374720 | 0.817627 | 2.989772e-52 | -8.615850e-47 |
| Msa0054480 | Msa1374720 | 0.820686 | 6.015929e-53 | -8.615850e-47 |
| Msa0093850 | Msa1374720 | 0.803536 | 3.326588e-49 | -8.615850e-47 |
| Msa0101270 | Msa1374720 | 0.806854 | 6.719319e-50 | -8.615850e-47 |
| Msa0108410 | Msa1374720 | 0.810307 | 1.230250e-50 | -8.615850e-47 |
| Msa1369150 | Msa1374720 | 0.800570 | 1.354628e-48 | -8.615850e-47 |
| Msa1371520 | Msa1374720 | 0.804727 | 1.879720e-49 | -8.615850e-47 |
| Msa1374060 | Msa1374720 | 0.840243 | 9.776710e-58 | -8.615850e-47 |
| Msa1374720 | Msa1375560 | 0.825271 | 5.132948e-54 | -8.615850e-47 |
| Msa1374720 | Msa1382560 | 0.834143 | 3.553654e-56 | -8.615850e-47 |
| Msa1374720 | Msa1418240 | 0.825381 | 4.834531e-54 | -8.615850e-47 |
| Msa1374720 | Msa1423350 | 0.815201 | 1.043916e-51 | -8.615850e-47 |
| Msa1374720 | Msa1425880 | 0.822355 | 2.476504e-53 | -8.615850e-47 |
| Msa1374720 | Msa1433390 | 0.801483 | 8.814232e-49 | -8.615850e-47 |
| Msa1374720 | Msa1440310 | 0.820611 | 6.261275e-53 | -8.615850e-47 |
| Msa1374720 | Msa1464810 | 0.808807 | 2.583217e-50 | -8.615850e-47 |
| Msa0625720 | Msa1374720 | 0.811520 | 6.720408e-51 | -8.615850e-47 |
| Msa0659550 | Msa1374720 | 0.812036 | 5.189169e-51 | -8.615850e-47 |
| Msa0663390 | Msa1374720 | 0.814200 | 1.739067e-51 | -8.615850e-47 |
| Msa0737560 | Msa1374720 | 0.819720 | 1.001267e-52 | -8.615850e-47 |
| Msa0828560 | Msa1374720 | 0.800067 | 1.714641e-48 | -8.615850e-47 |
| Msa0127020 | Msa1374720 | 0.800203 | 1.608831e-48 | -8.615850e-47 |
| Msa0137840 | Msa1374720 | 0.808230 | 3.429992e-50 | -8.615850e-47 |
| Msa0146280 | Msa1374720 | 0.836366 | 9.763161e-57 | -8.615850e-47 |
| Msa0168500 | Msa1374720 | 0.802097 | 6.595041e-49 | -8.615850e-47 |
| Msa0169280 | Msa1374720 | 0.802198 | 6.285431e-49 | -8.615850e-47 |
| Msa0184040 | Msa1374720 | 0.801152 | 1.030387e-48 | -8.615850e-47 |
| Msa0187120 | Msa1374720 | 0.806072 | 9.821845e-50 | -8.615850e-47 |
| Msa0221470 | Msa1374720 | 0.840229 | 9.860068e-58 | -8.615850e-47 |
| Msa1259060 | Msa1374720 | 0.805652 | 1.203820e-49 | -8.615850e-47 |
| Msa1286610 | Msa1374720 | 0.800709 | 1.268777e-48 | -8.615850e-47 |
| Msa1287440 | Msa1374720 | 0.820408 | 6.969559e-53 | -8.615850e-47 |
| Msa1328640 | Msa1374720 | 0.812088 | 5.055443e-51 | -8.615850e-47 |
| Msa1328710 | Msa1374720 | 0.827441 | 1.562248e-54 | -8.615850e-47 |
| Msa1332760 | Msa1374720 | 0.806082 | 9.778235e-50 | -8.615850e-47 |
| Msa0378720 | Msa1374720 | 0.811276 | 7.589726e-51 | -8.615850e-47 |
| Msa0432090 | Msa1374720 | 0.820721 | 5.904710e-53 | -8.615850e-47 |
| Msa0479170 | Msa1374720 | 0.828475 | 8.809216e-55 | -8.615850e-47 |
| Msa0479200 | Msa1374720 | 0.835097 | 2.046175e-56 | -8.615850e-47 |
| Msa0481530 | Msa1374720 | 0.803457 | 3.455001e-49 | -8.615850e-47 |
| Msa1027990 | Msa1374720 | 0.812712 | 3.692330e-51 | -8.615850e-47 |
| Msa1028280 | Msa1374720 | 0.802013 | 6.860564e-49 | -8.615850e-47 |
| Msa1079860 | Msa1374720 | 0.832340 | 9.997251e-56 | -8.615850e-47 |
| Msa1080640 | Msa1374720 | 0.825408 | 4.765340e-54 | -8.615850e-47 |
| Msa1089450 | Msa1374720 | 0.808694 | 2.731431e-50 | -8.615850e-47 |
| Msa0240900 | Msa1374720 | 0.802231 | 6.187926e-49 | -8.615850e-47 |
| Msa0241470 | Msa1374720 | 0.807363 | 5.244007e-50 | -8.615850e-47 |
| Msa0263060 | Msa1374720 | 0.818487 | 1.910586e-52 | -8.615850e-47 |
| Msa0287740 | Msa1374720 | 0.800661 | 1.298132e-48 | -8.615850e-47 |
| Msa0300320 | Msa1374720 | 0.806183 | 9.310685e-50 | -8.615850e-47 |
| Msa0317970 | Msa1374720 | 0.807086 | 6.000343e-50 | -8.615850e-47 |
| Msa0341690 | Msa1374720 | 0.806432 | 8.251661e-50 | -8.615850e-47 |
| Msa1126450 | Msa1374720 | 0.813129 | 2.991680e-51 | -8.615850e-47 |
| Msa1145810 | Msa1374720 | 0.811549 | 6.623699e-51 | -8.615850e-47 |
| Msa1156160 | Msa1374720 | 0.801282 | 9.692964e-49 | -8.615850e-47 |
| Msa1162770 | Msa1374720 | 0.801705 | 7.938349e-49 | -8.615850e-47 |
| Msa1199570 | Msa1374720 | 0.829535 | 4.875557e-55 | -8.615850e-47 |
| Msa1204530 | Msa1374720 | 0.804326 | 2.279713e-49 | -8.615850e-47 |
| Msa1204630 | Msa1374720 | 0.802799 | 4.725551e-49 | -8.615850e-47 |
| Msa1208880 | Msa1374720 | 0.809027 | 2.318092e-50 | -8.615850e-47 |
| Msa1219000 | Msa1374720 | 0.812072 | 5.095341e-51 | -8.615850e-47 |
| Msa0485240 | Msa1374720 | 0.818388 | 2.012394e-52 | -8.615850e-47 |
| Msa0520950 | Msa1374720 | 0.817856 | 2.654101e-52 | -8.615850e-47 |
| Msa0529890 | Msa1374720 | 0.810575 | 1.076649e-50 | -8.615850e-47 |
| Msa0572840 | Msa1374720 | 0.804475 | 2.121770e-49 | -8.615850e-47 |
| Msa0585560 | Msa1374720 | 0.817954 | 2.521907e-52 | -8.615850e-47 |
| Msa0856910 | Msa1374720 | 0.808859 | 2.518360e-50 | -8.615850e-47 |
| Msa0878510 | Msa1374720 | 0.807997 | 3.845134e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1374720 | MtrunA17_Chr3g0137011 | 96.025 | 805 | 29 | 1 | 1 | 805 | 1 | 802 | 0.0 | 1550 |
| Msa1374720 | MtrunA17_Chr1g0149971 | 62.500 | 328 | 92 | 1 | 1 | 297 | 1 | 328 | 4.89e-136 | 427 |
| Msa1374720 | MtrunA17_Chr1g0149971 | 38.354 | 571 | 266 | 15 | 293 | 805 | 396 | 938 | 2.21e-63 | 229 |
| Msa1374720 | MtrunA17_Chr4g0001301 | 46.457 | 254 | 135 | 1 | 4 | 256 | 6 | 259 | 1.12e-65 | 234 |
| Msa1374720 | MtrunA17_Chr4g0001301 | 31.915 | 141 | 71 | 3 | 455 | 593 | 704 | 821 | 2.55e-14 | 77.0 |
| Msa1374720 | MtrunA17_Chr4g0076411 | 46.977 | 215 | 114 | 0 | 23 | 237 | 29 | 243 | 4.26e-54 | 203 |
| Msa1374720 | MtrunA17_Chr4g0076411 | 33.945 | 109 | 51 | 3 | 496 | 587 | 1324 | 1428 | 6.66e-15 | 79.3 |
| Msa1374720 | MtrunA17_Chr2g0290621 | 44.053 | 227 | 127 | 0 | 11 | 237 | 8 | 234 | 2.23e-52 | 198 |
| Msa1374720 | MtrunA17_Chr2g0290621 | 41.053 | 95 | 46 | 2 | 500 | 588 | 1331 | 1421 | 3.95e-16 | 83.6 |
| Msa1374720 | MtrunA17_Chr1g0164141 | 36.471 | 170 | 108 | 0 | 54 | 223 | 62 | 231 | 8.81e-32 | 134 |
| Msa1374720 | MtrunA17_Chr4g0013631 | 43.103 | 116 | 65 | 1 | 10 | 124 | 18 | 133 | 2.14e-23 | 97.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1374720 | AT4G31880.1 | 39.948 | 776 | 330 | 23 | 1 | 678 | 1 | 738 | 1.43e-137 | 429 |
| Msa1374720 | AT4G31880.2 | 40.129 | 775 | 329 | 23 | 1 | 678 | 1 | 737 | 1.64e-137 | 429 |
| Msa1374720 | AT1G80810.5 | 52.174 | 253 | 119 | 1 | 1 | 253 | 5 | 255 | 2.43e-81 | 274 |
| Msa1374720 | AT1G15940.1 | 51.894 | 264 | 125 | 1 | 9 | 272 | 13 | 274 | 7.40e-81 | 280 |
| Msa1374720 | AT1G80810.3 | 52.174 | 253 | 119 | 1 | 1 | 253 | 5 | 255 | 1.22e-80 | 276 |
| Msa1374720 | AT1G80810.1 | 52.709 | 203 | 96 | 0 | 51 | 253 | 1 | 203 | 3.66e-67 | 238 |
| Msa1374720 | AT1G80810.4 | 52.709 | 203 | 96 | 0 | 51 | 253 | 1 | 203 | 3.68e-67 | 238 |
| Msa1374720 | AT1G80810.2 | 52.709 | 203 | 96 | 0 | 51 | 253 | 1 | 203 | 3.68e-67 | 238 |
| Msa1374720 | AT5G47690.1 | 48.165 | 218 | 113 | 0 | 9 | 226 | 6 | 223 | 2.30e-50 | 192 |
| Msa1374720 | AT5G47690.1 | 42.697 | 89 | 47 | 2 | 502 | 587 | 1333 | 1420 | 7.52e-17 | 86.3 |
| Msa1374720 | AT5G47690.2 | 48.165 | 218 | 113 | 0 | 9 | 226 | 6 | 223 | 2.41e-50 | 192 |
| Msa1374720 | AT5G47690.2 | 42.697 | 89 | 47 | 2 | 502 | 587 | 1334 | 1421 | 7.59e-17 | 86.3 |
| Msa1374720 | AT5G47690.3 | 48.165 | 218 | 113 | 0 | 9 | 226 | 6 | 223 | 2.43e-50 | 192 |
| Msa1374720 | AT5G47690.3 | 42.697 | 89 | 47 | 2 | 502 | 587 | 1334 | 1421 | 7.53e-17 | 86.3 |
| Msa1374720 | AT5G47690.4 | 53.175 | 126 | 59 | 0 | 101 | 226 | 1 | 126 | 4.50e-28 | 122 |
| Msa1374720 | AT5G47690.4 | 42.697 | 89 | 47 | 2 | 502 | 587 | 1237 | 1324 | 9.07e-17 | 85.9 |
| Msa1374720 | AT1G77600.1 | 30.736 | 231 | 129 | 3 | 27 | 228 | 25 | 253 | 4.48e-27 | 119 |
| Msa1374720 | AT1G77600.2 | 30.736 | 231 | 129 | 3 | 27 | 228 | 25 | 253 | 4.98e-27 | 119 |
| Msa1374720 | AT1G77600.3 | 30.736 | 231 | 129 | 3 | 27 | 228 | 25 | 253 | 6.94e-27 | 118 |
| Msa1374720 | AT5G10950.1 | 39.860 | 143 | 75 | 2 | 517 | 651 | 20 | 159 | 1.00e-19 | 92.8 |
Find 218 sgRNAs with CRISPR-Local
Find 458 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGACGCTTCTTTCCCTTCA+TGG | 0.130811 | tig0019570:-6441 | None:intergenic |
| TGTTTGGATATTCCACTCTT+TGG | 0.166899 | tig0019570:-6230 | None:intergenic |
| CCCTCAGAAGCAGCAGTCTT+TGG | 0.171948 | tig0019570:-6260 | None:intergenic |
| CTCTTCTTGGTGGCTTCTTC+TGG | 0.173818 | tig0019570:-2662 | None:intergenic |
| TGAAGTTAGCAGAAAGTTTA+AGG | 0.179426 | tig0019570:+6061 | Msa1374720:CDS |
| AGCCGATTTATGAAAGAATT+AGG | 0.183426 | tig0019570:-432 | None:intergenic |
| GTTTGGATATTCCACTCTTT+GGG | 0.201717 | tig0019570:-6229 | None:intergenic |
| GACTAGTTTAGTGGTATTTC+GGG | 0.203898 | tig0019570:+6664 | Msa1374720:three_prime_UTR |
| CGATTGTGCAGCCTCTTTAA+TGG | 0.217465 | tig0019570:-2522 | None:intergenic |
| TGAATGTGATGCGCTGATTT+TGG | 0.218531 | tig0019570:+1658 | Msa1374720:CDS |
| GGACCCTCTCTCCCAATTTC+CGG | 0.226072 | tig0019570:-2373 | None:intergenic |
| CCTCAGAAGCAGCAGTCTTT+GGG | 0.234718 | tig0019570:-6259 | None:intergenic |
| CAAATGAAGATACAATTAAT+TGG | 0.235034 | tig0019570:-1538 | None:intergenic |
| CTTGGAACCACCAATGTTCT+TGG | 0.235408 | tig0019570:-6141 | None:intergenic |
| TTTCCCGATTGCCCGGAAAT+TGG | 0.235820 | tig0019570:+2361 | Msa1374720:CDS |
| TTCCCATTTCGATTATCTTT+TGG | 0.253044 | tig0019570:-2545 | None:intergenic |
| GTGGTGGTGGATCCTCTTCC+AGG | 0.256318 | tig0019570:+3146 | Msa1374720:CDS |
| GGACTAGTTTAGTGGTATTT+CGG | 0.257064 | tig0019570:+6663 | Msa1374720:three_prime_UTR |
| CACTGGCTGCTTGACAGGTT+TGG | 0.265314 | tig0019570:-2993 | None:intergenic |
| ACCCTAATTCTTTCATAAAT+CGG | 0.290581 | tig0019570:+430 | Msa1374720:five_prime_UTR |
| CGATATAAATGAAAATGAAT+TGG | 0.293104 | tig0019570:-6839 | None:intergenic |
| AAAGCACTCAGCCAGGAAAT+TGG | 0.293936 | tig0019570:+3111 | Msa1374720:CDS |
| GAATGCCAGGTCTTTCTTCC+AGG | 0.300277 | tig0019570:+5376 | Msa1374720:CDS |
| TGAATCTAGAGCTGTTTATT+AGG | 0.302287 | tig0019570:+6581 | Msa1374720:three_prime_UTR |
| AATACTGCTGGTACAGATTC+AGG | 0.303408 | tig0019570:+3049 | Msa1374720:CDS |
| AGATGAGGAGTTCAATGATT+TGG | 0.311693 | tig0019570:+2616 | Msa1374720:CDS |
| TCCATTGTTTCTAGACTAGA+TGG | 0.317334 | tig0019570:+6717 | Msa1374720:three_prime_UTR |
| GCCGATTTATGAAAGAATTA+GGG | 0.320707 | tig0019570:-431 | None:intergenic |
| CACCAAGCAGGGCTTTAGTT+TGG | 0.323387 | tig0019570:-2411 | None:intergenic |
| CCAACCAATTCTTTCATAGA+TGG | 0.327431 | tig0019570:-1280 | None:intergenic |
| TTTCTCACTGGCTGCTTGAC+AGG | 0.329822 | tig0019570:-2998 | None:intergenic |
| CTCAAGAACAAGTGTCATAA+TGG | 0.335249 | tig0019570:-2148 | None:intergenic |
| GTGCACTTTCTTACAACATT+TGG | 0.337599 | tig0019570:+6529 | Msa1374720:three_prime_UTR |
| CAATACTGGCAGATGTTTAC+CGG | 0.340074 | tig0019570:+6812 | Msa1374720:three_prime_UTR |
| TAGTGGTATTTCGGGTTAGT+AGG | 0.343103 | tig0019570:+6672 | Msa1374720:three_prime_UTR |
| CTCGTTATCATCCAATTTCC+TGG | 0.347155 | tig0019570:-3122 | None:intergenic |
| CCTGGCATTCCTTGCTTAGT+TGG | 0.353048 | tig0019570:-5363 | None:intergenic |
| TGAAAACAGCTAAAATCATT+TGG | 0.358637 | tig0019570:+6749 | Msa1374720:three_prime_UTR |
| GAAAATTTAGTTTCAGAGAT+AGG | 0.360520 | tig0019570:+216 | None:intergenic |
| TGATTTGCTTTCTCCACTCC+TGG | 0.366420 | tig0019570:+2191 | Msa1374720:CDS |
| TCGCCAAAAGATAATCGAAA+TGG | 0.369344 | tig0019570:+2542 | Msa1374720:CDS |
| CCTTCATTGAATGAATGCTT+TGG | 0.373103 | tig0019570:+6779 | Msa1374720:three_prime_UTR |
| GCAATTCGCATAGACGTTCT+AGG | 0.374167 | tig0019570:-1250 | None:intergenic |
| TTCCCGATTGCCCGGAAATT+GGG | 0.382628 | tig0019570:+2362 | Msa1374720:CDS |
| CTATCCTTGGACTAGTTTAG+TGG | 0.385542 | tig0019570:+6655 | Msa1374720:three_prime_UTR |
| TTAGACTTGACTGAAGGTTT+TGG | 0.386181 | tig0019570:-6197 | None:intergenic |
| TGCTCCATCTATGAAAGAAT+TGG | 0.389043 | tig0019570:+1276 | Msa1374720:CDS |
| TGATTGTGAAGGAAAATAAC+AGG | 0.390612 | tig0019570:-363 | None:intergenic |
| GACCCTCTCTCCCAATTTCC+GGG | 0.390697 | tig0019570:-2372 | None:intergenic |
| ATTTGTAGTGGTGGAGCATC+AGG | 0.391514 | tig0019570:+5945 | Msa1374720:intron |
| TCTCCCAATTTCCGGGCAAT+CGG | 0.396259 | tig0019570:-2365 | None:intergenic |
| CATCTATGAAAGAATTGGTT+GGG | 0.401175 | tig0019570:+1281 | Msa1374720:CDS |
| TCAAAGGGTGTACTGAAGTT+TGG | 0.402194 | tig0019570:+5978 | Msa1374720:CDS |
| ATCAATGGCGTTTGATCAAA+AGG | 0.402831 | tig0019570:+549 | Msa1374720:exon |
| TAACTGCATACGCAACTTCC+TGG | 0.418667 | tig0019570:-2787 | None:intergenic |
| TATGATAGCATTGCTATCCT+TGG | 0.418722 | tig0019570:+6642 | Msa1374720:three_prime_UTR |
| ATCTGAAGATGAAAAGTTAG+AGG | 0.418816 | tig0019570:+3367 | Msa1374720:CDS |
| TTCATTTGATCATCATCATA+AGG | 0.422883 | tig0019570:-1394 | None:intergenic |
| TTTCCCTGGCCCGTGTCCTC+TGG | 0.427090 | tig0019570:+6558 | Msa1374720:three_prime_UTR |
| ATTCTTTCATAAATCGGCTT+CGG | 0.428490 | tig0019570:+436 | Msa1374720:five_prime_UTR |
| GGCGTTTGATCAAAAGGAAC+TGG | 0.431509 | tig0019570:+555 | Msa1374720:CDS |
| TTGAAGTATTAAATCTTGCC+AGG | 0.435890 | tig0019570:+4868 | Msa1374720:CDS |
| TTACTTAGCAAAGGTGGAAC+AGG | 0.436311 | tig0019570:+1225 | Msa1374720:CDS |
| TAAGCCGATCGTACGAGAAT+AGG | 0.436698 | tig0019570:+1579 | Msa1374720:CDS |
| GAGAACATTGGGTATATCTC+TGG | 0.436803 | tig0019570:+2442 | Msa1374720:CDS |
| TAGCTTCCTTAGCTTCCTCT+TGG | 0.437976 | tig0019570:-2496 | None:intergenic |
| GAGGAGACTACCACGACAAA+TGG | 0.438286 | tig0019570:+3386 | Msa1374720:CDS |
| ATTCAGTGCAAGATCTGAAA+AGG | 0.444766 | tig0019570:+508 | Msa1374720:five_prime_UTR |
| GAAGCGTCAGAGAAGCTAGA+AGG | 0.453355 | tig0019570:+6454 | Msa1374720:exon |
| CTCTGCAACCTCGACATTTG+AGG | 0.454625 | tig0019570:-2927 | None:intergenic |
| GATATAAATGAAAATGAATT+GGG | 0.455777 | tig0019570:-6838 | None:intergenic |
| CCCAAAGACTGCTGCTTCTG+AGG | 0.456966 | tig0019570:+6259 | Msa1374720:CDS |
| CTCCCAATTTCCGGGCAATC+GGG | 0.457215 | tig0019570:-2364 | None:intergenic |
| TCTGCAACCTCGACATTTGA+GGG | 0.459300 | tig0019570:-2926 | None:intergenic |
| AAATCAGCGCATCACATTCA+AGG | 0.460455 | tig0019570:-1655 | None:intergenic |
| TGGATCCTCTTCCAGGCAGC+TGG | 0.464531 | tig0019570:+3153 | Msa1374720:CDS |
| CTCACTGCTTGCACCAAGCA+GGG | 0.464741 | tig0019570:-2422 | None:intergenic |
| CGCCAAAAGATAATCGAAAT+GGG | 0.466756 | tig0019570:+2543 | Msa1374720:CDS |
| CTCAGAATCACTAACAGTCT+TGG | 0.467604 | tig0019570:-6036 | None:intergenic |
| GTGCAAGCAGTGAGAACATT+GGG | 0.468297 | tig0019570:+2431 | Msa1374720:CDS |
| CTATCAGGAGTCTGATATCA+TGG | 0.468949 | tig0019570:+3631 | Msa1374720:intron |
| TTTCTTATCTACCAGCTGCC+TGG | 0.470755 | tig0019570:-3164 | None:intergenic |
| TGACCTTTGCAACAGTTTCG+AGG | 0.471117 | tig0019570:-1610 | None:intergenic |
| AAGAAGCCACCAAGAAGAGC+AGG | 0.472325 | tig0019570:+2666 | Msa1374720:CDS |
| TTTCAATTGAACACTATCAA+TGG | 0.474728 | tig0019570:+534 | Msa1374720:exon |
| TCTCACTGCTTGCACCAAGC+AGG | 0.474746 | tig0019570:-2423 | None:intergenic |
| CACTGTCGACAGTGGTGGCA+AGG | 0.476270 | tig0019570:+6310 | Msa1374720:CDS |
| AGTACTTACTGACGATCCTT+CGG | 0.483797 | tig0019570:-3698 | None:intergenic |
| ATCATCATCATAAGGAGTAT+CGG | 0.486302 | tig0019570:-1386 | None:intergenic |
| TCCTTGCTTAGTTGGTTCAT+CGG | 0.486584 | tig0019570:-5355 | None:intergenic |
| TTCACCAGAGGACACGGGCC+AGG | 0.486984 | tig0019570:-6562 | None:intergenic |
| GATACAAAAGTCAAGACATC+AGG | 0.488137 | tig0019570:+6413 | Msa1374720:CDS |
| TAAATCTTGCCAGGGAAAAG+TGG | 0.488497 | tig0019570:+4877 | Msa1374720:CDS |
| GCAAGTGCAGCTTTCACATC+CGG | 0.489095 | tig0019570:-1328 | None:intergenic |
| ACATTTGGACATTCTTTCCC+TGG | 0.489687 | tig0019570:+6544 | Msa1374720:three_prime_UTR |
| CCAAAGCATTCATTCAATGA+AGG | 0.489899 | tig0019570:-6779 | None:intergenic |
| ATGAAAATGAATTGGGTGGC+CGG | 0.490428 | tig0019570:-6831 | None:intergenic |
| AGTGGTATTTCGGGTTAGTA+GGG | 0.491321 | tig0019570:+6673 | Msa1374720:three_prime_UTR |
| ATCTACCAGCTGCCTGGAAG+AGG | 0.493633 | tig0019570:-3158 | None:intergenic |
| TTCTCCTATTCTCGTACGAT+CGG | 0.494206 | tig0019570:-1583 | None:intergenic |
| GATGATAACGAGGGTGGTGG+TGG | 0.497097 | tig0019570:+3133 | Msa1374720:CDS |
| CATTATGACACTTGTTCTTG+AGG | 0.498006 | tig0019570:+2149 | Msa1374720:CDS |
| CCCATCGTTTGTGACTGACT+TGG | 0.499177 | tig0019570:-2576 | None:intergenic |
| GTTTGGATCCACAGCTTTCG+AGG | 0.500063 | tig0019570:-2394 | None:intergenic |
| CTCAGAAGCAGCAGTCTTTG+GGG | 0.500613 | tig0019570:-6258 | None:intergenic |
| ATCAGGATCAAGTAAATCAA+AGG | 0.501024 | tig0019570:+5962 | Msa1374720:CDS |
| TTAGTTGGTTCATCGGAACT+TGG | 0.501735 | tig0019570:-5348 | None:intergenic |
| GCAGCTTTCACATCCGGATC+CGG | 0.502993 | tig0019570:-1322 | None:intergenic |
| GACATCAGGTGATGCCATGA+AGG | 0.505863 | tig0019570:+6427 | Msa1374720:CDS |
| CCAACTAAGCAAGGAATGCC+AGG | 0.506972 | tig0019570:+5363 | Msa1374720:CDS |
| GAAGAGCAGCTTATTCAAGC+TGG | 0.507054 | tig0019570:+577 | Msa1374720:CDS |
| AACGATGGGGTTGCACGCGT+TGG | 0.509353 | tig0019570:+2590 | Msa1374720:CDS |
| AAGTGTCATAATGGTTTCCA+TGG | 0.511959 | tig0019570:-2139 | None:intergenic |
| TGTCAAGCAGCCAGTGAGAA+AGG | 0.513418 | tig0019570:+3000 | Msa1374720:CDS |
| TCATCATCATAAGGAGTATC+GGG | 0.514597 | tig0019570:-1385 | None:intergenic |
| TGACCAAGCACCTTTCTCAC+TGG | 0.515686 | tig0019570:-3010 | None:intergenic |
| GAGGAGTTCAATGATTTGGA+TGG | 0.521328 | tig0019570:+2620 | Msa1374720:CDS |
| TCCTGCTTAGACTTGACTGA+AGG | 0.526416 | tig0019570:-6203 | None:intergenic |
| TTTGGATATTCCACTCTTTG+GGG | 0.526750 | tig0019570:-6228 | None:intergenic |
| GAAGTTTGGTCAGAAGTCTA+CGG | 0.527431 | tig0019570:+5992 | Msa1374720:CDS |
| GATGATTTGATATCAGACCT+TGG | 0.529166 | tig0019570:-3347 | None:intergenic |
| AGAAGGCAAGCAACTAGATA+AGG | 0.532078 | tig0019570:-6498 | None:intergenic |
| AGAAGCTCATCCACCGATGA+AGG | 0.533354 | tig0019570:-619 | None:intergenic |
| ACCTTCAGTCAAGTCTAAGC+AGG | 0.533676 | tig0019570:+6202 | Msa1374720:CDS |
| GGAAAGAGGAAACACGCCTC+GGG | 0.536558 | tig0019570:+3407 | Msa1374720:CDS |
| GATGATTACAGTGAAGTACT+TGG | 0.537086 | tig0019570:+2464 | Msa1374720:CDS |
| TTCTTAATGCTCTCCAGGAG+TGG | 0.538291 | tig0019570:-2204 | None:intergenic |
| CCAAAGACTGCTGCTTCTGA+GGG | 0.540580 | tig0019570:+6260 | Msa1374720:CDS |
| TTGTTTCTAGACTAGATGGA+TGG | 0.541886 | tig0019570:+6721 | Msa1374720:three_prime_UTR |
| AAGGTGCTTGGTCAGAACTC+AGG | 0.544043 | tig0019570:+3019 | Msa1374720:CDS |
| AGAGGAAGCTAAGGAAGCTA+AGG | 0.545314 | tig0019570:+2499 | Msa1374720:CDS |
| TCCATCTAGTCTAGAAACAA+TGG | 0.546636 | tig0019570:-6718 | None:intergenic |
| TTGGATGATAACGAGGGTGG+TGG | 0.548250 | tig0019570:+3130 | Msa1374720:CDS |
| TCGGTGTAAGACTTGAAGTA+TGG | 0.548327 | tig0019570:+3672 | Msa1374720:CDS |
| CCATCTATGAAAGAATTGGT+TGG | 0.549801 | tig0019570:+1280 | Msa1374720:CDS |
| AAGTTTGGTCAGAAGTCTAC+GGG | 0.550142 | tig0019570:+5993 | Msa1374720:CDS |
| GAGTTCCTCACACGAGGACC+AGG | 0.551230 | tig0019570:+2769 | Msa1374720:CDS |
| CCAAGTCAGTCACAAACGAT+GGG | 0.552533 | tig0019570:+2576 | Msa1374720:CDS |
| GAACATGATCAAAACCTTGT+CGG | 0.553166 | tig0019570:+3653 | Msa1374720:CDS |
| ATCCAAACTAAAGCCCTGCT+TGG | 0.554749 | tig0019570:+2409 | Msa1374720:CDS |
| TCTGCTACACAGACAATGAC+TGG | 0.554858 | tig0019570:+6113 | Msa1374720:CDS |
| GCAGATTTCGTTGAATGACT+CGG | 0.555015 | tig0019570:-2695 | None:intergenic |
| TTCCAAGACAAGCAAAAGAA+AGG | 0.556484 | tig0019570:+6157 | Msa1374720:CDS |
| TGCCCGGAAATTGGGAGAGA+GGG | 0.556592 | tig0019570:+2370 | Msa1374720:CDS |
| AGGAAATGGTTTCTTCTCCA+AGG | 0.559797 | tig0019570:+3330 | Msa1374720:intron |
| GGAAGCTAAGGCCATTAAAG+AGG | 0.561082 | tig0019570:+2511 | Msa1374720:CDS |
| TCAGGATCAAGTAAATCAAA+GGG | 0.562001 | tig0019570:+5963 | Msa1374720:CDS |
| ACTGTCGACAGTGGTGGCAA+GGG | 0.563929 | tig0019570:+6311 | Msa1374720:CDS |
| GCTTGCAGATCCTCCTTCAT+CGG | 0.566230 | tig0019570:+606 | Msa1374720:CDS |
| CAGATCATGTGTGGTAATGT+TGG | 0.566430 | tig0019570:+1631 | Msa1374720:CDS |
| AACTTCCTGGTCCTCGTGTG+AGG | 0.566758 | tig0019570:-2774 | None:intergenic |
| CTTGCCACCACTGTCGACAG+TGG | 0.567493 | tig0019570:-6309 | None:intergenic |
| TCTAGATTCACCAGAGGACA+CGG | 0.567689 | tig0019570:-6568 | None:intergenic |
| TGCAGATCCTCCTTCATCGG+TGG | 0.570652 | tig0019570:+609 | Msa1374720:CDS |
| AATTTGCCAAGAGGAAGCTA+AGG | 0.573068 | tig0019570:+2490 | Msa1374720:CDS |
| TGGAAAGAGGAAACACGCCT+CGG | 0.573217 | tig0019570:+3406 | Msa1374720:CDS |
| TGTGATTTCACTGATGCAAG+CGG | 0.573290 | tig0019570:-1350 | None:intergenic |
| AAGAGCAGCTTATTCAAGCT+GGG | 0.574013 | tig0019570:+578 | Msa1374720:CDS |
| CTTCAAGTCTTACACCGACA+AGG | 0.576413 | tig0019570:-3667 | None:intergenic |
| AATCCTCGAAACTGTTGCAA+AGG | 0.577278 | tig0019570:+1607 | Msa1374720:CDS |
| CAAGACTGTTAGTGATTCTG+AGG | 0.578913 | tig0019570:+6037 | Msa1374720:CDS |
| TTCAGTGCAAGATCTGAAAA+GGG | 0.579578 | tig0019570:+509 | Msa1374720:five_prime_UTR |
| TGAGAGTTACTTAGCAAAGG+TGG | 0.580130 | tig0019570:+1219 | Msa1374720:CDS |
| ATCTATGAAAGAATTGGTTG+GGG | 0.581374 | tig0019570:+1282 | Msa1374720:CDS |
| TCACCAGAGGACACGGGCCA+GGG | 0.581742 | tig0019570:-6561 | None:intergenic |
| CTACCACGACAAATGGAAAG+AGG | 0.582950 | tig0019570:+3393 | Msa1374720:CDS |
| TGAAGTATTAAATCTTGCCA+GGG | 0.586714 | tig0019570:+4869 | Msa1374720:CDS |
| TCCGATGAACCAACTAAGCA+AGG | 0.588293 | tig0019570:+5354 | Msa1374720:CDS |
| GGTAAATCCAAGAACATTGG+TGG | 0.590164 | tig0019570:+6134 | Msa1374720:CDS |
| TCGTCAGGGAGGCTGTCACT+AGG | 0.590519 | tig0019570:-2860 | None:intergenic |
| TGATCCTATTCAGGCCTGCA+AGG | 0.591784 | tig0019570:+5313 | Msa1374720:intron |
| CAGCCAGTGAGAAAGGTGCT+TGG | 0.593042 | tig0019570:+3007 | Msa1374720:CDS |
| AAGGACAGCACTCCTAAAAG+TGG | 0.595871 | tig0019570:+6080 | Msa1374720:CDS |
| ATCAGATGTTTCTGCAAGCG+AGG | 0.596014 | tig0019570:+6382 | Msa1374720:CDS |
| AAGCAGGAAACCCCAAAGAG+TGG | 0.598967 | tig0019570:+6218 | Msa1374720:CDS |
| GAGTGGAGAAAGCAAATCAA+AGG | 0.599004 | tig0019570:-2187 | None:intergenic |
| ACTGGTAAATCCAAGAACAT+TGG | 0.599698 | tig0019570:+6131 | Msa1374720:CDS |
| TCCAAGTCAGTCACAAACGA+TGG | 0.601409 | tig0019570:+2575 | Msa1374720:CDS |
| CTCAAATGTCGAGGTTGCAG+AGG | 0.601585 | tig0019570:+2928 | Msa1374720:CDS |
| ACTTGAGAGTTACTTAGCAA+AGG | 0.603086 | tig0019570:+1216 | Msa1374720:CDS |
| TTATGATGATGATCAAATGA+AGG | 0.607368 | tig0019570:+1396 | Msa1374720:CDS |
| TTGCCCGGAAATTGGGAGAG+AGG | 0.608426 | tig0019570:+2369 | Msa1374720:CDS |
| TTTCCTCTTTCCATTTGTCG+TGG | 0.609734 | tig0019570:-3396 | None:intergenic |
| CAGGAAATTGGATGATAACG+AGG | 0.611071 | tig0019570:+3123 | Msa1374720:CDS |
| GAGAGGGTCCTCGAAAGCTG+TGG | 0.613676 | tig0019570:+2386 | Msa1374720:CDS |
| TGCACGCGTTGGAGAAGATG+AGG | 0.613913 | tig0019570:+2601 | Msa1374720:CDS |
| GGGAGGCTGTCACTAGGTGA+AGG | 0.615922 | tig0019570:-2854 | None:intergenic |
| ATGCAACACATACATTTCAG+TGG | 0.620376 | tig0019570:-5039 | None:intergenic |
| ACATCAGGTGATGCCATGAA+GGG | 0.620593 | tig0019570:+6428 | Msa1374720:CDS |
| TAACAACAATGAGCTGATCA+CGG | 0.621097 | tig0019570:-6621 | None:intergenic |
| AGCTGATTCAGATGCAGATG+AGG | 0.623229 | tig0019570:+4911 | Msa1374720:CDS |
| CTGTCGACAGTGGTGGCAAG+GGG | 0.625265 | tig0019570:+6312 | Msa1374720:CDS |
| AATACCACTAAACTAGTCCA+AGG | 0.627128 | tig0019570:-6659 | None:intergenic |
| AAACAAAGTGGGTCTGCTAG+TGG | 0.628936 | tig0019570:+3076 | Msa1374720:CDS |
| ACAAACCTGGAAGAAAGACC+TGG | 0.629724 | tig0019570:-5381 | None:intergenic |
| GGTGCAAGCAGTGAGAACAT+TGG | 0.629894 | tig0019570:+2430 | Msa1374720:CDS |
| AATCAGGGATCATCATCCAA+AGG | 0.631340 | tig0019570:+2104 | Msa1374720:intron |
| GTGTAAGACTTGAAGTATGG+TGG | 0.634803 | tig0019570:+3675 | Msa1374720:CDS |
| AAAGTGCACTGATAAGCAGA+AGG | 0.636249 | tig0019570:-6515 | None:intergenic |
| ACTTGGTTCAATTTGCCAAG+AGG | 0.637801 | tig0019570:+2481 | Msa1374720:CDS |
| ATAAATGAAAATGAATTGGG+TGG | 0.639637 | tig0019570:-6835 | None:intergenic |
| AGCTCATCCACCGATGAAGG+AGG | 0.640218 | tig0019570:-616 | None:intergenic |
| AGATAACCCCTCAAATGTCG+AGG | 0.643896 | tig0019570:+2919 | Msa1374720:CDS |
| ACTTGAAGTATGGTGGCCGA+AGG | 0.646361 | tig0019570:+3682 | Msa1374720:CDS |
| CTGCAACCTCGACATTTGAG+GGG | 0.648380 | tig0019570:-2925 | None:intergenic |
| AAGTCCACTGTCGACAGTGG+TGG | 0.650146 | tig0019570:+6305 | Msa1374720:CDS |
| CAGGAAGAAGAAAGTGATCG+TGG | 0.654410 | tig0019570:+5002 | Msa1374720:intron |
| GATTGTGAAGGAAAATAACA+GGG | 0.656282 | tig0019570:-362 | None:intergenic |
| CTAGATTCACCAGAGGACAC+GGG | 0.668586 | tig0019570:-6567 | None:intergenic |
| AGATGTTTCTGCAAGCGAGG+AGG | 0.672748 | tig0019570:+6385 | Msa1374720:CDS |
| TTTGGTCAGAAGTCTACGGG+TGG | 0.672786 | tig0019570:+5996 | Msa1374720:CDS |
| AGTTCTGAGTTCCTCACACG+AGG | 0.679478 | tig0019570:+2763 | Msa1374720:CDS |
| AGGAAATTGGATGATAACGA+GGG | 0.693056 | tig0019570:+3124 | Msa1374720:CDS |
| AAATTGGATGATAACGAGGG+TGG | 0.699562 | tig0019570:+3127 | Msa1374720:CDS |
| CAAGTCAGTCACAAACGATG+GGG | 0.710724 | tig0019570:+2577 | Msa1374720:CDS |
| GAAAAGTCCACTGTCGACAG+TGG | 0.714672 | tig0019570:+6302 | Msa1374720:CDS |
| AACAGCTCTAGATTCACCAG+AGG | 0.719637 | tig0019570:-6574 | None:intergenic |
| TGCAAAGGTCAGATCATGTG+TGG | 0.730397 | tig0019570:+1622 | Msa1374720:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATTTTTTTTTTGTTAATAT+AGG | + | tig0019570:3310-3329 | Msa1374720:intron | 10.0% |
| !!! | ATTTAAGATATAACTTTAAA+TGG | + | tig0019570:4559-4578 | Msa1374720:intron | 10.0% |
| !! | AGAGAGAAAAAAAAAATAAA+GGG | - | tig0019570:326-345 | None:intergenic | 15.0% |
| !! | AAGAGAGAAAAAAAAAATAA+AGG | - | tig0019570:327-346 | None:intergenic | 15.0% |
| !!! | AAAAATTAGGGTTTTTATTT+GGG | - | tig0019570:403-422 | None:intergenic | 15.0% |
| !!! | ATTTTCAGTTTTTTTTATTC+TGG | + | tig0019570:698-717 | Msa1374720:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTGTGTCT+TGG | + | tig0019570:774-793 | Msa1374720:intron | 15.0% |
| !! | ATTATAACAAAGCAAATTTA+GGG | - | tig0019570:845-864 | None:intergenic | 15.0% |
| !!! | TAAATTTGCTTTGTTATAAT+GGG | + | tig0019570:845-864 | Msa1374720:intron | 15.0% |
| !!! | TATAAAAGGTTGAATTTTTT+AGG | + | tig0019570:1121-1140 | Msa1374720:intron | 15.0% |
| !! | ATATATTAACGATTTAAACA+AGG | - | tig0019570:2300-2319 | None:intergenic | 15.0% |
| !!! | TTTTTTGTTAATATAGGAAA+TGG | + | tig0019570:3316-3335 | Msa1374720:intron | 15.0% |
| !! | TTATATTCTACAAAATGAAA+AGG | - | tig0019570:4272-4291 | None:intergenic | 15.0% |
| !!! | CTTTTAAATAAGAAATTCAT+TGG | - | tig0019570:4508-4527 | None:intergenic | 15.0% |
| !! | AAATGCAAACAAAATAATTT+AGG | - | tig0019570:5144-5163 | None:intergenic | 15.0% |
| !! | AATTAATCTCCATATAATAA+AGG | - | tig0019570:5216-5235 | None:intergenic | 15.0% |
| !!! | TGTAAAAACAATTTTTTAAC+AGG | - | tig0019570:5618-5637 | None:intergenic | 15.0% |
| !! | GAAAATATGATAGTAAATAA+CGG | - | tig0019570:5917-5936 | None:intergenic | 15.0% |
| !! | GAGAGAAAAAAAAAATAAAG+GGG | - | tig0019570:325-344 | None:intergenic | 20.0% |
| !!! | AAAATTAGGGTTTTTATTTG+GGG | - | tig0019570:402-421 | None:intergenic | 20.0% |
| !!! | GAAAAATTAGGGTTTTTATT+TGG | - | tig0019570:404-423 | None:intergenic | 20.0% |
| !!! | ATTTTTAAAATTCCACTGAT+TGG | - | tig0019570:747-766 | None:intergenic | 20.0% |
| !! | CATTATAACAAAGCAAATTT+AGG | - | tig0019570:846-865 | None:intergenic | 20.0% |
| !!! | CTAAATTTGCTTTGTTATAA+TGG | + | tig0019570:844-863 | Msa1374720:intron | 20.0% |
| !!! | AAATTTGCTTTGTTATAATG+GGG | + | tig0019570:846-865 | Msa1374720:intron | 20.0% |
| !!! | TGTTGATTATGATATATACT+GGG | - | tig0019570:992-1011 | None:intergenic | 20.0% |
| !!! | ATGTTGATTATGATATATAC+TGG | - | tig0019570:993-1012 | None:intergenic | 20.0% |
| !!! | TTTTTTTGATACAGTTTCAA+TGG | + | tig0019570:1429-1448 | Msa1374720:intron | 20.0% |
| !! | CAAATGAAGATACAATTAAT+TGG | - | tig0019570:1541-1560 | None:intergenic | 20.0% |
| !!! | TAAACAGTTTTCTTTTAACT+CGG | + | tig0019570:1915-1934 | Msa1374720:intron | 20.0% |
| !!! | AAAGCTTTTCATTTGATATT+TGG | + | tig0019570:2035-2054 | Msa1374720:intron | 20.0% |
| !! | AGGATATTTAAACTAAAAGA+AGG | + | tig0019570:4178-4197 | Msa1374720:intron | 20.0% |
| !!! | ATGCTTGTTTTTTCTATTTT+AGG | + | tig0019570:4824-4843 | Msa1374720:intron | 20.0% |
| !! | AATTGTCATTAATTTAGACA+CGG | - | tig0019570:4971-4990 | None:intergenic | 20.0% |
| !!! | ATTAATGACAATTATTTCTG+TGG | + | tig0019570:4978-4997 | Msa1374720:intron | 20.0% |
| !! | AATTGGGTTAATAAATCAAA+GGG | + | tig0019570:5484-5503 | Msa1374720:intron | 20.0% |
| !! | AATATAATACAGTATGATGT+TGG | - | tig0019570:5669-5688 | None:intergenic | 20.0% |
| !! | ACATCATACTGTATTATATT+AGG | + | tig0019570:5669-5688 | Msa1374720:intron | 20.0% |
| !!! | AAATTAGGGTTTTTATTTGG+GGG | - | tig0019570:401-420 | None:intergenic | 25.0% |
| !! | AGGGTTTTACAGAAAAATTA+GGG | - | tig0019570:415-434 | None:intergenic | 25.0% |
| !! | TAGGGTTTTACAGAAAAATT+AGG | - | tig0019570:416-435 | None:intergenic | 25.0% |
| ! | ACCCTAATTCTTTCATAAAT+CGG | + | tig0019570:430-449 | Msa1374720:five_prime_UTR | 25.0% |
| ! | TTTCAATTGAACACTATCAA+TGG | + | tig0019570:534-553 | Msa1374720:exon | 25.0% |
| ! | ATATTTGATATACCAATCAG+TGG | + | tig0019570:732-751 | Msa1374720:intron | 25.0% |
| ! | TCATAATCAACATCAATCTT+TGG | + | tig0019570:1000-1019 | Msa1374720:intron | 25.0% |
| !! | CTATCTGTGTTTTCATTTTA+TGG | + | tig0019570:1065-1084 | Msa1374720:intron | 25.0% |
| ! | TTCATTTGATCATCATCATA+AGG | - | tig0019570:1397-1416 | None:intergenic | 25.0% |
| !! | TTATGATGATGATCAAATGA+AGG | + | tig0019570:1396-1415 | Msa1374720:CDS | 25.0% |
| ! | ATAACAAAAAATTGCTCCTA+GGG | - | tig0019570:1721-1740 | None:intergenic | 25.0% |
| ! | AATAACAAAAAATTGCTCCT+AGG | - | tig0019570:1722-1741 | None:intergenic | 25.0% |
| ! | AATAGAACATAAAAGCTCTA+AGG | - | tig0019570:1896-1915 | None:intergenic | 25.0% |
| !!! | AAACAGTTTTCTTTTAACTC+GGG | + | tig0019570:1916-1935 | Msa1374720:intron | 25.0% |
| ! | TATTTGGAGAAATTTATACG+TGG | + | tig0019570:2051-2070 | Msa1374720:intron | 25.0% |
| ! | ATTTGGAGAAATTTATACGT+GGG | + | tig0019570:2052-2071 | Msa1374720:intron | 25.0% |
| ! | ACTCAAAATCATAATCTACT+AGG | - | tig0019570:2272-2291 | None:intergenic | 25.0% |
| !!! | TGATGTATTGATTAGGATTT+AGG | + | tig0019570:3501-3520 | Msa1374720:intron | 25.0% |
| !!! | GATGTATTGATTAGGATTTA+GGG | + | tig0019570:3502-3521 | Msa1374720:intron | 25.0% |
| !!! | ATTTAGGGTACATTTTCTTT+TGG | + | tig0019570:3517-3536 | Msa1374720:intron | 25.0% |
| !!! | ATATCTAGTTTTTGCATACA+TGG | + | tig0019570:3827-3846 | Msa1374720:intron | 25.0% |
| ! | ATGAAATCACACAAAACATT+AGG | - | tig0019570:3889-3908 | None:intergenic | 25.0% |
| ! | ACTATTGCAGTTTACAATAT+AGG | - | tig0019570:4017-4036 | None:intergenic | 25.0% |
| ! | ACAAATATATGATTGTTTGC+AGG | + | tig0019570:4309-4328 | Msa1374720:intron | 25.0% |
| ! | ATAGACCATAAAGAATAGAA+GGG | - | tig0019570:4423-4442 | None:intergenic | 25.0% |
| ! | AATAGACCATAAAGAATAGA+AGG | - | tig0019570:4424-4443 | None:intergenic | 25.0% |
| ! | ATTCTTTATGGTCTATTGTA+TGG | + | tig0019570:4427-4446 | Msa1374720:intron | 25.0% |
| ! | GGTATAAAAATATAACATGC+TGG | + | tig0019570:4580-4599 | Msa1374720:intron | 25.0% |
| !! | GAAAGCACAAAAAAAATCTT+CGG | - | tig0019570:4705-4724 | None:intergenic | 25.0% |
| ! | TATTAAGCTAGAAACTAGAA+AGG | + | tig0019570:4726-4745 | Msa1374720:intron | 25.0% |
| !!! | CTTGTTTTTTCTATTTTAGG+TGG | + | tig0019570:4827-4846 | Msa1374720:intron | 25.0% |
| ! | AAAGATTATGGTGTAATGTA+AGG | - | tig0019570:4947-4966 | None:intergenic | 25.0% |
| ! | ATTGTCATTAATTTAGACAC+GGG | - | tig0019570:4970-4989 | None:intergenic | 25.0% |
| ! | TAATCTCCATATAATAAAGG+AGG | - | tig0019570:5213-5232 | None:intergenic | 25.0% |
| ! | AACAAGACCAAATTAAGAAA+CGG | - | tig0019570:5276-5295 | None:intergenic | 25.0% |
| !!! | TCTTAATTTGGTCTTGTTTA+TGG | + | tig0019570:5278-5297 | Msa1374720:intron | 25.0% |
| !!! | ATTGTTTTTTGATCCTATTC+AGG | + | tig0019570:5304-5323 | Msa1374720:intron | 25.0% |
| ! | TATATTGATATTGACAAACC+TGG | - | tig0019570:5397-5416 | None:intergenic | 25.0% |
| ! | CAATTGGGTTAATAAATCAA+AGG | + | tig0019570:5483-5502 | Msa1374720:intron | 25.0% |
| ! | TCATACTGTATTATATTAGG+AGG | + | tig0019570:5672-5691 | Msa1374720:intron | 25.0% |
| ! | TTCATTGAAGAAAAAAGACT+TGG | + | tig0019570:6343-6362 | Msa1374720:CDS | 25.0% |
| ! | AACTAGATAAGGAAAAATCA+AGG | - | tig0019570:6490-6509 | None:intergenic | 25.0% |
| ! | TGAAAACAGCTAAAATCATT+TGG | + | tig0019570:6749-6768 | Msa1374720:three_prime_UTR | 25.0% |
| GATTGTGAAGGAAAATAACA+GGG | - | tig0019570:365-384 | None:intergenic | 30.0% | |
| TGATTGTGAAGGAAAATAAC+AGG | - | tig0019570:366-385 | None:intergenic | 30.0% | |
| !!! | TTTTGTTTTGGTGATTGTGA+AGG | - | tig0019570:377-396 | None:intergenic | 30.0% |
| !! | TTATTTGGGGGTTTTTGTTT+TGG | - | tig0019570:389-408 | None:intergenic | 30.0% |
| ! | GCCGATTTATGAAAGAATTA+GGG | - | tig0019570:434-453 | None:intergenic | 30.0% |
| ! | AGCCGATTTATGAAAGAATT+AGG | - | tig0019570:435-454 | None:intergenic | 30.0% |
| ! | ATTCTTTCATAAATCGGCTT+CGG | + | tig0019570:436-455 | Msa1374720:five_prime_UTR | 30.0% |
| !!! | TTTTTTGTGTCTTGGATGTT+TGG | + | tig0019570:782-801 | Msa1374720:intron | 30.0% |
| ATAATAACTAGTGTGATACG+CGG | - | tig0019570:957-976 | None:intergenic | 30.0% | |
| AAACACAGATAGTTCCATTT+GGG | - | tig0019570:1057-1076 | None:intergenic | 30.0% | |
| AAAACACAGATAGTTCCATT+TGG | - | tig0019570:1058-1077 | None:intergenic | 30.0% | |
| GATTCATGACACAGTATAAA+AGG | + | tig0019570:1107-1126 | Msa1374720:intron | 30.0% | |
| AGTAAAACATACAGAAGTCT+TGG | + | tig0019570:1147-1166 | Msa1374720:intron | 30.0% | |
| CATCTATGAAAGAATTGGTT+GGG | + | tig0019570:1281-1300 | Msa1374720:CDS | 30.0% | |
| ATCTATGAAAGAATTGGTTG+GGG | + | tig0019570:1282-1301 | Msa1374720:CDS | 30.0% | |
| ! | ATCATCATCATAAGGAGTAT+CGG | - | tig0019570:1389-1408 | None:intergenic | 30.0% |
| ! | TGCTAATGAATTTTTCTTGC+AGG | + | tig0019570:1508-1527 | Msa1374720:intron | 30.0% |
| !!! | AGCATTTTTTGAAGACCATA+AGG | + | tig0019570:1690-1709 | Msa1374720:CDS | 30.0% |
| GATAGATCAGATCAAATTTG+AGG | - | tig0019570:1795-1814 | None:intergenic | 30.0% | |
| ATGTGAATGTAGCAACTATA+TGG | - | tig0019570:1824-1843 | None:intergenic | 30.0% | |
| !! | AACAGTTTTCTTTTAACTCG+GGG | + | tig0019570:1917-1936 | Msa1374720:intron | 30.0% |
| TTTGGAGAAATTTATACGTG+GGG | + | tig0019570:2053-2072 | Msa1374720:intron | 30.0% | |
| ATGGATGAAAAAACATCCTT+TGG | - | tig0019570:2123-2142 | None:intergenic | 30.0% | |
| !!! | AAAGGATGTTTTTTCATCCA+TGG | + | tig0019570:2122-2141 | Msa1374720:CDS | 30.0% |
| ATTAAGAAAAACAACGAGGT+TGG | + | tig0019570:2219-2238 | Msa1374720:intron | 30.0% | |
| ! | GTCATTGTTATTAATCATCG+TGG | + | tig0019570:2328-2347 | Msa1374720:intron | 30.0% |
| ! | TTCCCATTTCGATTATCTTT+TGG | - | tig0019570:2548-2567 | None:intergenic | 30.0% |
| ! | GAATCAATCATCTTTTCAGA+TGG | - | tig0019570:2725-2744 | None:intergenic | 30.0% |
| !! | GTTTCAAAAAAGGTATCTGA+AGG | + | tig0019570:2953-2972 | Msa1374720:CDS | 30.0% |
| ATTCAGGCAAAAAACAAAGT+GGG | + | tig0019570:3065-3084 | Msa1374720:CDS | 30.0% | |
| ATCTGAAGATGAAAAGTTAG+AGG | + | tig0019570:3367-3386 | Msa1374720:CDS | 30.0% | |
| !! | CATGATGTGATGTATTGATT+AGG | + | tig0019570:3494-3513 | Msa1374720:intron | 30.0% |
| !! | AAGTTTTGTGATTGCTAACT+AGG | - | tig0019570:3573-3592 | None:intergenic | 30.0% |
| GCATGTCAAAAATTCAGAAA+TGG | - | tig0019570:3732-3751 | None:intergenic | 30.0% | |
| !!! | TTAAGAGATTTTGGCTAACA+AGG | + | tig0019570:3756-3775 | Msa1374720:intron | 30.0% |
| !!! | TAAGAGATTTTGGCTAACAA+GGG | + | tig0019570:3757-3776 | Msa1374720:intron | 30.0% |
| ! | AATCATTGTGTAGACCTTTT+TGG | + | tig0019570:3942-3961 | Msa1374720:intron | 30.0% |
| AAAACATTGATGTGGAATTG+TGG | + | tig0019570:4152-4171 | Msa1374720:intron | 30.0% | |
| AAACATTGATGTGGAATTGT+GGG | + | tig0019570:4153-4172 | Msa1374720:intron | 30.0% | |
| ! | ATTGTTTGCAGGTTTTACAA+AGG | + | tig0019570:4320-4339 | Msa1374720:intron | 30.0% |
| ! | TTTTCGCAAAAAGAAACACA+AGG | + | tig0019570:4361-4380 | Msa1374720:CDS | 30.0% |
| TAGACCATAAAGAATAGAAG+GGG | - | tig0019570:4422-4441 | None:intergenic | 30.0% | |
| ! | TCTGATTATTTCTTCTCCTT+TGG | + | tig0019570:4452-4471 | Msa1374720:intron | 30.0% |
| !!! | GTTGGGGTTTATTCTTTTTT+GGG | - | tig0019570:4683-4702 | None:intergenic | 30.0% |
| ACAAAAAAAATCTTCGGTTG+GGG | - | tig0019570:4699-4718 | None:intergenic | 30.0% | |
| CACAAAAAAAATCTTCGGTT+GGG | - | tig0019570:4700-4719 | None:intergenic | 30.0% | |
| ! | TTGAAGTATTAAATCTTGCC+AGG | + | tig0019570:4868-4887 | Msa1374720:CDS | 30.0% |
| ! | TGAAGTATTAAATCTTGCCA+GGG | + | tig0019570:4869-4888 | Msa1374720:CDS | 30.0% |
| GATTAATTGAATGTGTCTTG+TGG | + | tig0019570:5228-5247 | Msa1374720:intron | 30.0% | |
| AAATTAAGAAACGGCAAGAA+AGG | - | tig0019570:5267-5286 | None:intergenic | 30.0% | |
| ! | TTTCTTGCCGTTTCTTAATT+TGG | + | tig0019570:5266-5285 | Msa1374720:intron | 30.0% |
| AATTGGACACATCAGAAAAA+AGG | - | tig0019570:5437-5456 | None:intergenic | 30.0% | |
| GACAAATCCAAGTAGAAAAT+TGG | - | tig0019570:5454-5473 | None:intergenic | 30.0% | |
| ATTCAATGACAATGCATTGA+TGG | + | tig0019570:5570-5589 | Msa1374720:intron | 30.0% | |
| ATCAGGATCAAGTAAATCAA+AGG | + | tig0019570:5962-5981 | Msa1374720:CDS | 30.0% | |
| TCAGGATCAAGTAAATCAAA+GGG | + | tig0019570:5963-5982 | Msa1374720:CDS | 30.0% | |
| TGAAGTTAGCAGAAAGTTTA+AGG | + | tig0019570:6061-6080 | Msa1374720:CDS | 30.0% | |
| ATTGAAGAAAAAAGACTTGG+AGG | + | tig0019570:6346-6365 | Msa1374720:CDS | 30.0% | |
| ! | TGAATCTAGAGCTGTTTATT+AGG | + | tig0019570:6581-6600 | Msa1374720:three_prime_UTR | 30.0% |
| AAAAATAAAGGGGAGAGAGA+GGG | - | tig0019570:315-334 | None:intergenic | 35.0% | |
| AAAAAATAAAGGGGAGAGAG+AGG | - | tig0019570:316-335 | None:intergenic | 35.0% | |
| ATTCAGTGCAAGATCTGAAA+AGG | + | tig0019570:508-527 | Msa1374720:five_prime_UTR | 35.0% | |
| TTCAGTGCAAGATCTGAAAA+GGG | + | tig0019570:509-528 | Msa1374720:five_prime_UTR | 35.0% | |
| ATCAATGGCGTTTGATCAAA+AGG | + | tig0019570:549-568 | Msa1374720:exon | 35.0% | |
| ATTTGCATATCTATTCGCAC+TGG | + | tig0019570:915-934 | Msa1374720:intron | 35.0% | |
| !! | CAACATCAATCTTTGGTGTT+TGG | + | tig0019570:1007-1026 | Msa1374720:intron | 35.0% |
| ! | TCATTTTATGGTGTAAGCTC+TGG | + | tig0019570:1077-1096 | Msa1374720:intron | 35.0% |
| ! | CATTTTATGGTGTAAGCTCT+GGG | + | tig0019570:1078-1097 | Msa1374720:intron | 35.0% |
| ! | ATCTGATCTAATCTTTTCCC+TGG | + | tig0019570:1182-1201 | Msa1374720:intron | 35.0% |
| ! | TCTGATCTAATCTTTTCCCT+GGG | + | tig0019570:1183-1202 | Msa1374720:intron | 35.0% |
| ACTTGAGAGTTACTTAGCAA+AGG | + | tig0019570:1216-1235 | Msa1374720:CDS | 35.0% | |
| TGCTCCATCTATGAAAGAAT+TGG | + | tig0019570:1276-1295 | Msa1374720:CDS | 35.0% | |
| CCAACCAATTCTTTCATAGA+TGG | - | tig0019570:1283-1302 | None:intergenic | 35.0% | |
| CCATCTATGAAAGAATTGGT+TGG | + | tig0019570:1280-1299 | Msa1374720:CDS | 35.0% | |
| ! | TGGTTGGGGATAAACTTTTA+AGG | + | tig0019570:1296-1315 | Msa1374720:CDS | 35.0% |
| !!! | GGATAAACTTTTAAGGCATC+CGG | + | tig0019570:1303-1322 | Msa1374720:CDS | 35.0% |
| !! | TCATCATCATAAGGAGTATC+GGG | - | tig0019570:1388-1407 | None:intergenic | 35.0% |
| ! | ACCAAACATCTCAAGCTTTT+GGG | + | tig0019570:1849-1868 | Msa1374720:intron | 35.0% |
| !! | ATCTCAAGCTTTTGGGAAAT+TGG | + | tig0019570:1856-1875 | Msa1374720:intron | 35.0% |
| !! | TCTCAAGCTTTTGGGAAATT+GGG | + | tig0019570:1857-1876 | Msa1374720:intron | 35.0% |
| !! | ACAGTTTTCTTTTAACTCGG+GGG | + | tig0019570:1918-1937 | Msa1374720:intron | 35.0% |
| TTGGAGAAATTTATACGTGG+GGG | + | tig0019570:2054-2073 | Msa1374720:intron | 35.0% | |
| ! | GATGATCCCTGATTTTCAAA+TGG | - | tig0019570:2098-2117 | None:intergenic | 35.0% |
| AAGTGTCATAATGGTTTCCA+TGG | - | tig0019570:2142-2161 | None:intergenic | 35.0% | |
| CTCAAGAACAAGTGTCATAA+TGG | - | tig0019570:2151-2170 | None:intergenic | 35.0% | |
| CATTATGACACTTGTTCTTG+AGG | + | tig0019570:2149-2168 | Msa1374720:CDS | 35.0% | |
| ! | TGTTTTTCTTAATGCTCTCC+AGG | - | tig0019570:2212-2231 | None:intergenic | 35.0% |
| GAGCATTAAGAAAAACAACG+AGG | + | tig0019570:2215-2234 | Msa1374720:CDS | 35.0% | |
| ! | GATGATTACAGTGAAGTACT+TGG | + | tig0019570:2464-2483 | Msa1374720:CDS | 35.0% |
| TCGCCAAAAGATAATCGAAA+TGG | + | tig0019570:2542-2561 | Msa1374720:CDS | 35.0% | |
| CGCCAAAAGATAATCGAAAT+GGG | + | tig0019570:2543-2562 | Msa1374720:CDS | 35.0% | |
| AGATGAGGAGTTCAATGATT+TGG | + | tig0019570:2616-2635 | Msa1374720:CDS | 35.0% | |
| ! | TCTCTGAATGATTTTCGTCA+GGG | - | tig0019570:2877-2896 | None:intergenic | 35.0% |
| ! | TTCTCTGAATGATTTTCGTC+AGG | - | tig0019570:2878-2897 | None:intergenic | 35.0% |
| GATTCAGGCAAAAAACAAAG+TGG | + | tig0019570:3064-3083 | Msa1374720:CDS | 35.0% | |
| ! | AGGAAATTGGATGATAACGA+GGG | + | tig0019570:3124-3143 | Msa1374720:CDS | 35.0% |
| AGCTGGTAGATAAGAAAAAG+CGG | + | tig0019570:3170-3189 | Msa1374720:CDS | 35.0% | |
| GATGATTTGATATCAGACCT+TGG | - | tig0019570:3350-3369 | None:intergenic | 35.0% | |
| ATTCTTTCTGTAGATACGTC+TGG | + | tig0019570:3543-3562 | Msa1374720:intron | 35.0% | |
| GAACATGATCAAAACCTTGT+CGG | + | tig0019570:3653-3672 | Msa1374720:CDS | 35.0% | |
| ! | CATGCTGTCTTAAGAGATTT+TGG | + | tig0019570:3747-3766 | Msa1374720:intron | 35.0% |
| TGCAGTTTACAATATAGGTC+AGG | - | tig0019570:4012-4031 | None:intergenic | 35.0% | |
| CAACGACATATTGTCTATTG+TGG | + | tig0019570:4068-4087 | Msa1374720:intron | 35.0% | |
| GCAGTTCAGAAACAGTAATT+TGG | - | tig0019570:4101-4120 | None:intergenic | 35.0% | |
| ACTGTGAGAAAACATTGATG+TGG | + | tig0019570:4144-4163 | Msa1374720:intron | 35.0% | |
| AAAAGAAACACAAGGTGACT+TGG | + | tig0019570:4369-4388 | Msa1374720:intron | 35.0% | |
| TTGGAAGAAATAGTCAGAGT+GGG | - | tig0019570:4489-4508 | None:intergenic | 35.0% | |
| ATTGGAAGAAATAGTCAGAG+TGG | - | tig0019570:4490-4509 | None:intergenic | 35.0% | |
| TGAATGTGTGTGTCTACTTT+AGG | + | tig0019570:4530-4549 | Msa1374720:intron | 35.0% | |
| GAATGTGTGTGTCTACTTTA+GGG | + | tig0019570:4531-4550 | Msa1374720:intron | 35.0% | |
| !!! | GGTTGGGGTTTATTCTTTTT+TGG | - | tig0019570:4684-4703 | None:intergenic | 35.0% |
| GCACAAAAAAAATCTTCGGT+TGG | - | tig0019570:4701-4720 | None:intergenic | 35.0% | |
| AAGCTAGAAACTAGAAAGGT+TGG | + | tig0019570:4730-4749 | Msa1374720:intron | 35.0% | |
| !! | TTTTAGGTGGTTTATGACGA+TGG | + | tig0019570:4840-4859 | Msa1374720:intron | 35.0% |
| TTTAGACACGGGAAAGATTA+TGG | - | tig0019570:4959-4978 | None:intergenic | 35.0% | |
| !! | TGACAATTATTTCTGTGGAC+AGG | + | tig0019570:4983-5002 | Msa1374720:intron | 35.0% |
| ATGCAACACATACATTTCAG+TGG | - | tig0019570:5042-5061 | None:intergenic | 35.0% | |
| CACGTTCCTCCTTTATTATA+TGG | + | tig0019570:5204-5223 | Msa1374720:intron | 35.0% | |
| ! | GATGTGTCCAATTTTCTACT+TGG | + | tig0019570:5444-5463 | Msa1374720:intron | 35.0% |
| ! | TTTTCTACTTGGATTTGTCG+TGG | + | tig0019570:5455-5474 | Msa1374720:intron | 35.0% |
| TTTCTACTTGGATTTGTCGT+GGG | + | tig0019570:5456-5475 | Msa1374720:intron | 35.0% | |
| ! | TTTCCTTCTTCGATTTGTAG+TGG | + | tig0019570:5933-5952 | Msa1374720:intron | 35.0% |
| !! | GATTTACTGCTACCACTTTT+AGG | - | tig0019570:6095-6114 | None:intergenic | 35.0% |
| ACTGGTAAATCCAAGAACAT+TGG | + | tig0019570:6131-6150 | Msa1374720:CDS | 35.0% | |
| TTCCAAGACAAGCAAAAGAA+AGG | + | tig0019570:6157-6176 | Msa1374720:CDS | 35.0% | |
| ! | ATCCTTTCTTTTGCTTGTCT+TGG | - | tig0019570:6162-6181 | None:intergenic | 35.0% |
| ! | TTAGACTTGACTGAAGGTTT+TGG | - | tig0019570:6200-6219 | None:intergenic | 35.0% |
| TTTGGATATTCCACTCTTTG+GGG | - | tig0019570:6231-6250 | None:intergenic | 35.0% | |
| GTTTGGATATTCCACTCTTT+GGG | - | tig0019570:6232-6251 | None:intergenic | 35.0% | |
| TGTTTGGATATTCCACTCTT+TGG | - | tig0019570:6233-6252 | None:intergenic | 35.0% | |
| !!! | AGTCTTTGGGGTTTTTTGTT+TGG | - | tig0019570:6249-6268 | None:intergenic | 35.0% |
| !!! | TGGACTTTTCACCACTTTTT+GGG | - | tig0019570:6292-6311 | None:intergenic | 35.0% |
| GATACAAAAGTCAAGACATC+AGG | + | tig0019570:6413-6432 | Msa1374720:CDS | 35.0% | |
| GTGCACTTTCTTACAACATT+TGG | + | tig0019570:6529-6548 | Msa1374720:three_prime_UTR | 35.0% | |
| TAACAACAATGAGCTGATCA+CGG | - | tig0019570:6624-6643 | None:intergenic | 35.0% | |
| TATGATAGCATTGCTATCCT+TGG | + | tig0019570:6642-6661 | Msa1374720:three_prime_UTR | 35.0% | |
| AATACCACTAAACTAGTCCA+AGG | - | tig0019570:6662-6681 | None:intergenic | 35.0% | |
| !! | GGACTAGTTTAGTGGTATTT+CGG | + | tig0019570:6663-6682 | Msa1374720:three_prime_UTR | 35.0% |
| !! | GACTAGTTTAGTGGTATTTC+GGG | + | tig0019570:6664-6683 | Msa1374720:three_prime_UTR | 35.0% |
| !! | TCCATTGTTTCTAGACTAGA+TGG | + | tig0019570:6717-6736 | Msa1374720:three_prime_UTR | 35.0% |
| TCCATCTAGTCTAGAAACAA+TGG | - | tig0019570:6721-6740 | None:intergenic | 35.0% | |
| !! | TTGTTTCTAGACTAGATGGA+TGG | + | tig0019570:6721-6740 | Msa1374720:three_prime_UTR | 35.0% |
| ! | CCAAAGCATTCATTCAATGA+AGG | - | tig0019570:6782-6801 | None:intergenic | 35.0% |
| CCTTCATTGAATGAATGCTT+TGG | + | tig0019570:6779-6798 | Msa1374720:three_prime_UTR | 35.0% | |
| !!! | TTGGCTCTAGTTTTCAATAC+TGG | + | tig0019570:6798-6817 | Msa1374720:three_prime_UTR | 35.0% |
| CTCTACTCAGCTTCGAAAAA+TGG | - | tig0019570:481-500 | None:intergenic | 40.0% | |
| AAGAGCAGCTTATTCAAGCT+GGG | + | tig0019570:578-597 | Msa1374720:CDS | 40.0% | |
| TGAGAGTTACTTAGCAAAGG+TGG | + | tig0019570:1219-1238 | Msa1374720:CDS | 40.0% | |
| TTACTTAGCAAAGGTGGAAC+AGG | + | tig0019570:1225-1244 | Msa1374720:CDS | 40.0% | |
| TGTGATTTCACTGATGCAAG+CGG | - | tig0019570:1353-1372 | None:intergenic | 40.0% | |
| TAAAGTGCATGACAACAGAC+AGG | - | tig0019570:1455-1474 | None:intergenic | 40.0% | |
| TTCTCCTATTCTCGTACGAT+CGG | - | tig0019570:1586-1605 | None:intergenic | 40.0% | |
| AATCCTCGAAACTGTTGCAA+AGG | + | tig0019570:1607-1626 | Msa1374720:CDS | 40.0% | |
| ! | CAGATCATGTGTGGTAATGT+TGG | + | tig0019570:1631-1650 | Msa1374720:CDS | 40.0% |
| AAATCAGCGCATCACATTCA+AGG | - | tig0019570:1658-1677 | None:intergenic | 40.0% | |
| !!! | TGAATGTGATGCGCTGATTT+TGG | + | tig0019570:1658-1677 | Msa1374720:CDS | 40.0% |
| ATTCAAGTCCAGCACTATCA+TGG | + | tig0019570:1739-1758 | Msa1374720:intron | 40.0% | |
| TTCAAGTCCAGCACTATCAT+GGG | + | tig0019570:1740-1759 | Msa1374720:intron | 40.0% | |
| ! | CACCAAACATCTCAAGCTTT+TGG | + | tig0019570:1848-1867 | Msa1374720:intron | 40.0% |
| TCCCAAAAGCTTGAGATGTT+TGG | - | tig0019570:1853-1872 | None:intergenic | 40.0% | |
| !! | TCTTTTAACTCGGGGGATAA+AGG | + | tig0019570:1925-1944 | Msa1374720:intron | 40.0% |
| !! | CTTTTAACTCGGGGGATAAA+GGG | + | tig0019570:1926-1945 | Msa1374720:intron | 40.0% |
| ! | TCCAGGTAAAAGCATGTGAA+CGG | - | tig0019570:1976-1995 | None:intergenic | 40.0% |
| ACCTGGAAACTCAAGTTCTT+AGG | + | tig0019570:1989-2008 | Msa1374720:intron | 40.0% | |
| TCCTAAGAACTTGAGTTTCC+AGG | - | tig0019570:1993-2012 | None:intergenic | 40.0% | |
| ACCAGCTCCATTTGAAAATC+AGG | + | tig0019570:2088-2107 | Msa1374720:intron | 40.0% | |
| CCAGCTCCATTTGAAAATCA+GGG | + | tig0019570:2089-2108 | Msa1374720:intron | 40.0% | |
| AATCAGGGATCATCATCCAA+AGG | + | tig0019570:2104-2123 | Msa1374720:intron | 40.0% | |
| GAGTGGAGAAAGCAAATCAA+AGG | - | tig0019570:2190-2209 | None:intergenic | 40.0% | |
| GTTATTAATCATCGTGGTCC+AGG | + | tig0019570:2334-2353 | Msa1374720:intron | 40.0% | |
| GAGAACATTGGGTATATCTC+TGG | + | tig0019570:2442-2461 | Msa1374720:CDS | 40.0% | |
| ACTTGGTTCAATTTGCCAAG+AGG | + | tig0019570:2481-2500 | Msa1374720:CDS | 40.0% | |
| AATTTGCCAAGAGGAAGCTA+AGG | + | tig0019570:2490-2509 | Msa1374720:CDS | 40.0% | |
| ! | GAGGAGTTCAATGATTTGGA+TGG | + | tig0019570:2620-2639 | Msa1374720:CDS | 40.0% |
| GCAGATTTCGTTGAATGACT+CGG | - | tig0019570:2698-2717 | None:intergenic | 40.0% | |
| ! | TGCAGAGGCTGTTTCAAAAA+AGG | + | tig0019570:2943-2962 | Msa1374720:CDS | 40.0% |
| TCAGGCGTAAAAAATACTGC+TGG | + | tig0019570:3037-3056 | Msa1374720:CDS | 40.0% | |
| AATACTGCTGGTACAGATTC+AGG | + | tig0019570:3049-3068 | Msa1374720:CDS | 40.0% | |
| CTCGTTATCATCCAATTTCC+TGG | - | tig0019570:3125-3144 | None:intergenic | 40.0% | |
| ! | CAGGAAATTGGATGATAACG+AGG | + | tig0019570:3123-3142 | Msa1374720:CDS | 40.0% |
| ! | AAATTGGATGATAACGAGGG+TGG | + | tig0019570:3127-3146 | Msa1374720:CDS | 40.0% |
| GCTGGTAGATAAGAAAAAGC+GGG | + | tig0019570:3171-3190 | Msa1374720:CDS | 40.0% | |
| CTGGTAGATAAGAAAAAGCG+GGG | + | tig0019570:3172-3191 | Msa1374720:CDS | 40.0% | |
| TGGTAGATAAGAAAAAGCGG+GGG | + | tig0019570:3173-3192 | Msa1374720:CDS | 40.0% | |
| AGGAAATGGTTTCTTCTCCA+AGG | + | tig0019570:3330-3349 | Msa1374720:intron | 40.0% | |
| TTTCCTCTTTCCATTTGTCG+TGG | - | tig0019570:3399-3418 | None:intergenic | 40.0% | |
| !!! | ACACACATTTTTTCTTCCCG+AGG | - | tig0019570:3426-3445 | None:intergenic | 40.0% |
| CTAATTGTCTTGCTGCTATC+AGG | + | tig0019570:3616-3635 | Msa1374720:intron | 40.0% | |
| CTATCAGGAGTCTGATATCA+TGG | + | tig0019570:3631-3650 | Msa1374720:intron | 40.0% | |
| TCGGTGTAAGACTTGAAGTA+TGG | + | tig0019570:3672-3691 | Msa1374720:CDS | 40.0% | |
| GTGTAAGACTTGAAGTATGG+TGG | + | tig0019570:3675-3694 | Msa1374720:CDS | 40.0% | |
| AGTACTTACTGACGATCCTT+CGG | - | tig0019570:3701-3720 | None:intergenic | 40.0% | |
| !! | AGGGAGTGTTATATACTGTG+TGG | + | tig0019570:3783-3802 | Msa1374720:intron | 40.0% |
| CCATGATAACATCGCCAAAA+AGG | - | tig0019570:3959-3978 | None:intergenic | 40.0% | |
| !! | CCTTTTTGGCGATGTTATCA+TGG | + | tig0019570:3956-3975 | Msa1374720:intron | 40.0% |
| CGATGTTATCATGGTCTTCA+TGG | + | tig0019570:3965-3984 | Msa1374720:intron | 40.0% | |
| TTGATGTGGAATTGTGGGAA+AGG | + | tig0019570:4158-4177 | Msa1374720:intron | 40.0% | |
| CCATAAAGAATAGAAGGGGA+GGG | - | tig0019570:4418-4437 | None:intergenic | 40.0% | |
| ACCATAAAGAATAGAAGGGG+AGG | - | tig0019570:4419-4438 | None:intergenic | 40.0% | |
| GTGGGACAATTACTATCCAA+AGG | - | tig0019570:4471-4490 | None:intergenic | 40.0% | |
| ! | ACATGCTGGATTTGAAATCC+TGG | + | tig0019570:4594-4613 | Msa1374720:intron | 40.0% |
| ! | CATGCTGGATTTGAAATCCT+GGG | + | tig0019570:4595-4614 | Msa1374720:intron | 40.0% |
| TAAATCTTGCCAGGGAAAAG+TGG | + | tig0019570:4877-4896 | Msa1374720:CDS | 40.0% | |
| !! | AATGATGTTCCACTTTTCCC+TGG | - | tig0019570:4889-4908 | None:intergenic | 40.0% |
| GCAAGAAAGGCAGATCATAT+TGG | - | tig0019570:5254-5273 | None:intergenic | 40.0% | |
| !!! | GGTTTTGTTTTCTTCCTTGC+AGG | - | tig0019570:5330-5349 | None:intergenic | 40.0% |
| ! | TTAGTTGGTTCATCGGAACT+TGG | - | tig0019570:5351-5370 | None:intergenic | 40.0% |
| ! | TCCTTGCTTAGTTGGTTCAT+CGG | - | tig0019570:5358-5377 | None:intergenic | 40.0% |
| TGGACACATCAGAAAAAAGG+TGG | - | tig0019570:5434-5453 | None:intergenic | 40.0% | |
| TTCTACTTGGATTTGTCGTG+GGG | + | tig0019570:5457-5476 | Msa1374720:intron | 40.0% | |
| !! | GGTTGTTTGTGCAGTTTTAG+AGG | + | tig0019570:5693-5712 | Msa1374720:intron | 40.0% |
| ! | TCAAAGGGTGTACTGAAGTT+TGG | + | tig0019570:5978-5997 | Msa1374720:CDS | 40.0% |
| GAAGTTTGGTCAGAAGTCTA+CGG | + | tig0019570:5992-6011 | Msa1374720:CDS | 40.0% | |
| AAGTTTGGTCAGAAGTCTAC+GGG | + | tig0019570:5993-6012 | Msa1374720:CDS | 40.0% | |
| CTCAGAATCACTAACAGTCT+TGG | - | tig0019570:6039-6058 | None:intergenic | 40.0% | |
| CAAGACTGTTAGTGATTCTG+AGG | + | tig0019570:6037-6056 | Msa1374720:CDS | 40.0% | |
| GGTAAATCCAAGAACATTGG+TGG | + | tig0019570:6134-6153 | Msa1374720:CDS | 40.0% | |
| !!! | GACTTTTCACCACTTTTTGG+GGG | - | tig0019570:6290-6309 | None:intergenic | 40.0% |
| !!! | GGACTTTTCACCACTTTTTG+GGG | - | tig0019570:6291-6310 | None:intergenic | 40.0% |
| !! | GTGGACTTTTCACCACTTTT+TGG | - | tig0019570:6293-6312 | None:intergenic | 40.0% |
| AGAAGGCAAGCAACTAGATA+AGG | - | tig0019570:6501-6520 | None:intergenic | 40.0% | |
| ! | AAAGTGCACTGATAAGCAGA+AGG | - | tig0019570:6518-6537 | None:intergenic | 40.0% |
| ACATTTGGACATTCTTTCCC+TGG | + | tig0019570:6544-6563 | Msa1374720:three_prime_UTR | 40.0% | |
| !! | CTATCCTTGGACTAGTTTAG+TGG | + | tig0019570:6655-6674 | Msa1374720:three_prime_UTR | 40.0% |
| !! | TAGTGGTATTTCGGGTTAGT+AGG | + | tig0019570:6672-6691 | Msa1374720:three_prime_UTR | 40.0% |
| !! | AGTGGTATTTCGGGTTAGTA+GGG | + | tig0019570:6673-6692 | Msa1374720:three_prime_UTR | 40.0% |
| CAATACTGGCAGATGTTTAC+CGG | + | tig0019570:6812-6831 | Msa1374720:three_prime_UTR | 40.0% | |
| GGCGTTTGATCAAAAGGAAC+TGG | + | tig0019570:555-574 | Msa1374720:CDS | 45.0% | |
| GAAGAGCAGCTTATTCAAGC+TGG | + | tig0019570:577-596 | Msa1374720:CDS | 45.0% | |
| !! | TTATGGTGTAAGCTCTGGGA+TGG | + | tig0019570:1082-1101 | Msa1374720:intron | 45.0% |
| GCAATTCGCATAGACGTTCT+AGG | - | tig0019570:1253-1272 | None:intergenic | 45.0% | |
| !!! | ACTTTTAAGGCATCCGGATC+CGG | + | tig0019570:1309-1328 | Msa1374720:CDS | 45.0% |
| TAAGCCGATCGTACGAGAAT+AGG | + | tig0019570:1579-1598 | Msa1374720:CDS | 45.0% | |
| TGACCTTTGCAACAGTTTCG+AGG | - | tig0019570:1613-1632 | None:intergenic | 45.0% | |
| TGCAAAGGTCAGATCATGTG+TGG | + | tig0019570:1622-1641 | Msa1374720:CDS | 45.0% | |
| ! | ATCCAAACCCATGATAGTGC+TGG | - | tig0019570:1750-1769 | None:intergenic | 45.0% |
| ! | CCCTGATTTTCAAATGGAGC+TGG | - | tig0019570:2092-2111 | None:intergenic | 45.0% |
| !! | TGATTTGCTTTCTCCACTCC+TGG | + | tig0019570:2191-2210 | Msa1374720:CDS | 45.0% |
| TTCTTAATGCTCTCCAGGAG+TGG | - | tig0019570:2207-2226 | None:intergenic | 45.0% | |
| ATCCAAACTAAAGCCCTGCT+TGG | + | tig0019570:2409-2428 | Msa1374720:CDS | 45.0% | |
| GTGCAAGCAGTGAGAACATT+GGG | + | tig0019570:2431-2450 | Msa1374720:CDS | 45.0% | |
| TAGCTTCCTTAGCTTCCTCT+TGG | - | tig0019570:2499-2518 | None:intergenic | 45.0% | |
| AGAGGAAGCTAAGGAAGCTA+AGG | + | tig0019570:2499-2518 | Msa1374720:CDS | 45.0% | |
| GGAAGCTAAGGCCATTAAAG+AGG | + | tig0019570:2511-2530 | Msa1374720:CDS | 45.0% | |
| CGATTGTGCAGCCTCTTTAA+TGG | - | tig0019570:2525-2544 | None:intergenic | 45.0% | |
| TCCAAGTCAGTCACAAACGA+TGG | + | tig0019570:2575-2594 | Msa1374720:CDS | 45.0% | |
| CCAAGTCAGTCACAAACGAT+GGG | + | tig0019570:2576-2595 | Msa1374720:CDS | 45.0% | |
| CAAGTCAGTCACAAACGATG+GGG | + | tig0019570:2577-2596 | Msa1374720:CDS | 45.0% | |
| ! | TTTTCTCCTGCTCTTCTTGG+TGG | - | tig0019570:2675-2694 | None:intergenic | 45.0% |
| TAACTGCATACGCAACTTCC+TGG | - | tig0019570:2790-2809 | None:intergenic | 45.0% | |
| ! | CTGAATGATTTTCGTCAGGG+AGG | - | tig0019570:2874-2893 | None:intergenic | 45.0% |
| AGATAACCCCTCAAATGTCG+AGG | + | tig0019570:2919-2938 | Msa1374720:CDS | 45.0% | |
| TCTGCAACCTCGACATTTGA+GGG | - | tig0019570:2929-2948 | None:intergenic | 45.0% | |
| AAACAAAGTGGGTCTGCTAG+TGG | + | tig0019570:3076-3095 | Msa1374720:CDS | 45.0% | |
| !! | ATGCTAAAAAGCACTCAGCC+AGG | + | tig0019570:3104-3123 | Msa1374720:CDS | 45.0% |
| ! | AAAGCACTCAGCCAGGAAAT+TGG | + | tig0019570:3111-3130 | Msa1374720:CDS | 45.0% |
| TTTCTTATCTACCAGCTGCC+TGG | - | tig0019570:3167-3186 | None:intergenic | 45.0% | |
| CTACCACGACAAATGGAAAG+AGG | + | tig0019570:3393-3412 | Msa1374720:CDS | 45.0% | |
| CTTCAAGTCTTACACCGACA+AGG | - | tig0019570:3670-3689 | None:intergenic | 45.0% | |
| !!! | ATTTTGGCTAACAAGGGTGC+AGG | + | tig0019570:3763-3782 | Msa1374720:intron | 45.0% |
| !! | TTTTGGCTAACAAGGGTGCA+GGG | + | tig0019570:3764-3783 | Msa1374720:intron | 45.0% |
| CCCTCCCCTTCTATTCTTTA+TGG | + | tig0019570:4415-4434 | Msa1374720:intron | 45.0% | |
| AAACCACTGCTTGCTTGAGA+GGG | - | tig0019570:4636-4655 | None:intergenic | 45.0% | |
| AAAACCACTGCTTGCTTGAG+AGG | - | tig0019570:4637-4656 | None:intergenic | 45.0% | |
| ! | AGCTGATTCAGATGCAGATG+AGG | + | tig0019570:4911-4930 | Msa1374720:CDS | 45.0% |
| GATTCAGATGCAGATGAGGT+TGG | + | tig0019570:4915-4934 | Msa1374720:intron | 45.0% | |
| CAGGAAGAAGAAAGTGATCG+TGG | + | tig0019570:5002-5021 | Msa1374720:intron | 45.0% | |
| TCCGATGAACCAACTAAGCA+AGG | + | tig0019570:5354-5373 | Msa1374720:CDS | 45.0% | |
| ACAAACCTGGAAGAAAGACC+TGG | - | tig0019570:5384-5403 | None:intergenic | 45.0% | |
| TCTACTTGGATTTGTCGTGG+GGG | + | tig0019570:5458-5477 | Msa1374720:intron | 45.0% | |
| CCACCACTACAAATCGAAGA+AGG | - | tig0019570:5939-5958 | None:intergenic | 45.0% | |
| ! | CCTTCTTCGATTTGTAGTGG+TGG | + | tig0019570:5936-5955 | Msa1374720:intron | 45.0% |
| ! | ATTTGTAGTGGTGGAGCATC+AGG | + | tig0019570:5945-5964 | Msa1374720:intron | 45.0% |
| AAGGACAGCACTCCTAAAAG+TGG | + | tig0019570:6080-6099 | Msa1374720:CDS | 45.0% | |
| TCTGCTACACAGACAATGAC+TGG | + | tig0019570:6113-6132 | Msa1374720:CDS | 45.0% | |
| CTTGGAACCACCAATGTTCT+TGG | - | tig0019570:6144-6163 | None:intergenic | 45.0% | |
| ACCTTCAGTCAAGTCTAAGC+AGG | + | tig0019570:6202-6221 | Msa1374720:CDS | 45.0% | |
| TCCTGCTTAGACTTGACTGA+AGG | - | tig0019570:6206-6225 | None:intergenic | 45.0% | |
| ! | ATCAGATGTTTCTGCAAGCG+AGG | + | tig0019570:6382-6401 | Msa1374720:CDS | 45.0% |
| ACATCAGGTGATGCCATGAA+GGG | + | tig0019570:6428-6447 | Msa1374720:CDS | 45.0% | |
| TCTAGATTCACCAGAGGACA+CGG | - | tig0019570:6571-6590 | None:intergenic | 45.0% | |
| !! | AACAGCTCTAGATTCACCAG+AGG | - | tig0019570:6577-6596 | None:intergenic | 45.0% |
| !!! | TTTTAAAAACAAATTATTTA+TGG | + | tig0019570:3284-3303 | Msa1374720:intron | 5.0% |
| GCTTGCAGATCCTCCTTCAT+CGG | + | tig0019570:606-625 | Msa1374720:CDS | 50.0% | |
| AGAAGCTCATCCACCGATGA+AGG | - | tig0019570:622-641 | None:intergenic | 50.0% | |
| GTGCATGCTTCAAGCCCAAA+TGG | + | tig0019570:1040-1059 | Msa1374720:intron | 50.0% | |
| GCAAGTGCAGCTTTCACATC+CGG | - | tig0019570:1331-1350 | None:intergenic | 50.0% | |
| AGACCATAAGGTGAGACCCT+AGG | + | tig0019570:1702-1721 | Msa1374720:intron | 50.0% | |
| GTCCAGCACTATCATGGGTT+TGG | + | tig0019570:1745-1764 | Msa1374720:intron | 50.0% | |
| ! | GCCGTTCACATGCTTTTACC+TGG | + | tig0019570:1972-1991 | Msa1374720:intron | 50.0% |
| ! | AGGAAGTTTTCCCGATTGCC+CGG | + | tig0019570:2354-2373 | Msa1374720:intron | 50.0% |
| TTTCCCGATTGCCCGGAAAT+TGG | + | tig0019570:2361-2380 | Msa1374720:CDS | 50.0% | |
| TTCCCGATTGCCCGGAAATT+GGG | + | tig0019570:2362-2381 | Msa1374720:CDS | 50.0% | |
| TCTCCCAATTTCCGGGCAAT+CGG | - | tig0019570:2368-2387 | None:intergenic | 50.0% | |
| GTTTGGATCCACAGCTTTCG+AGG | - | tig0019570:2397-2416 | None:intergenic | 50.0% | |
| ! | CACCAAGCAGGGCTTTAGTT+TGG | - | tig0019570:2414-2433 | None:intergenic | 50.0% |
| GGTGCAAGCAGTGAGAACAT+TGG | + | tig0019570:2430-2449 | Msa1374720:CDS | 50.0% | |
| CCCATCGTTTGTGACTGACT+TGG | - | tig0019570:2579-2598 | None:intergenic | 50.0% | |
| ! | CTCTTCTTGGTGGCTTCTTC+TGG | - | tig0019570:2665-2684 | None:intergenic | 50.0% |
| AAGAAGCCACCAAGAAGAGC+AGG | + | tig0019570:2666-2685 | Msa1374720:CDS | 50.0% | |
| ! | CGGTTTTCTCCTGCTCTTCT+TGG | - | tig0019570:2678-2697 | None:intergenic | 50.0% |
| !! | AGTTCTGAGTTCCTCACACG+AGG | + | tig0019570:2763-2782 | Msa1374720:CDS | 50.0% |
| CTGCAACCTCGACATTTGAG+GGG | - | tig0019570:2928-2947 | None:intergenic | 50.0% | |
| CTCTGCAACCTCGACATTTG+AGG | - | tig0019570:2930-2949 | None:intergenic | 50.0% | |
| CTCAAATGTCGAGGTTGCAG+AGG | + | tig0019570:2928-2947 | Msa1374720:CDS | 50.0% | |
| ! | TTTCTCACTGGCTGCTTGAC+AGG | - | tig0019570:3001-3020 | None:intergenic | 50.0% |
| TGTCAAGCAGCCAGTGAGAA+AGG | + | tig0019570:3000-3019 | Msa1374720:CDS | 50.0% | |
| TGACCAAGCACCTTTCTCAC+TGG | - | tig0019570:3013-3032 | None:intergenic | 50.0% | |
| ! | AAGGTGCTTGGTCAGAACTC+AGG | + | tig0019570:3019-3038 | Msa1374720:CDS | 50.0% |
| ! | TTGGATGATAACGAGGGTGG+TGG | + | tig0019570:3130-3149 | Msa1374720:CDS | 50.0% |
| AGATAAGAAAAAGCGGGGGC+AGG | + | tig0019570:3177-3196 | Msa1374720:CDS | 50.0% | |
| GAGGAGACTACCACGACAAA+TGG | + | tig0019570:3386-3405 | Msa1374720:CDS | 50.0% | |
| TGGAAAGAGGAAACACGCCT+CGG | + | tig0019570:3406-3425 | Msa1374720:CDS | 50.0% | |
| ACTTGAAGTATGGTGGCCGA+AGG | + | tig0019570:3682-3701 | Msa1374720:CDS | 50.0% | |
| AACCACTGCTTGCTTGAGAG+GGG | - | tig0019570:4635-4654 | None:intergenic | 50.0% | |
| TGATCCTATTCAGGCCTGCA+AGG | + | tig0019570:5313-5332 | Msa1374720:intron | 50.0% | |
| TCTTCCTTGCAGGCCTGAAT+AGG | - | tig0019570:5320-5339 | None:intergenic | 50.0% | |
| CCTGGCATTCCTTGCTTAGT+TGG | - | tig0019570:5366-5385 | None:intergenic | 50.0% | |
| CCAACTAAGCAAGGAATGCC+AGG | + | tig0019570:5363-5382 | Msa1374720:CDS | 50.0% | |
| GAATGCCAGGTCTTTCTTCC+AGG | + | tig0019570:5376-5395 | Msa1374720:CDS | 50.0% | |
| ATTTGTCGTGGGGGAGCAAT+TGG | + | tig0019570:5467-5486 | Msa1374720:intron | 50.0% | |
| TTTGTCGTGGGGGAGCAATT+GGG | + | tig0019570:5468-5487 | Msa1374720:intron | 50.0% | |
| TTTGGTCAGAAGTCTACGGG+TGG | + | tig0019570:5996-6015 | Msa1374720:CDS | 50.0% | |
| AAGCAGGAAACCCCAAAGAG+TGG | + | tig0019570:6218-6237 | Msa1374720:CDS | 50.0% | |
| CTCAGAAGCAGCAGTCTTTG+GGG | - | tig0019570:6261-6280 | None:intergenic | 50.0% | |
| CCTCAGAAGCAGCAGTCTTT+GGG | - | tig0019570:6262-6281 | None:intergenic | 50.0% | |
| ! | CCAAAGACTGCTGCTTCTGA+GGG | + | tig0019570:6260-6279 | Msa1374720:CDS | 50.0% |
| GAAAAGTCCACTGTCGACAG+TGG | + | tig0019570:6302-6321 | Msa1374720:CDS | 50.0% | |
| ! | AGATGTTTCTGCAAGCGAGG+AGG | + | tig0019570:6385-6404 | Msa1374720:CDS | 50.0% |
| GACATCAGGTGATGCCATGA+AGG | + | tig0019570:6427-6446 | Msa1374720:CDS | 50.0% | |
| CTGACGCTTCTTTCCCTTCA+TGG | - | tig0019570:6444-6463 | None:intergenic | 50.0% | |
| ! | GAAGCGTCAGAGAAGCTAGA+AGG | + | tig0019570:6454-6473 | Msa1374720:exon | 50.0% |
| CTAGATTCACCAGAGGACAC+GGG | - | tig0019570:6570-6589 | None:intergenic | 50.0% | |
| TGCAGATCCTCCTTCATCGG+TGG | + | tig0019570:609-628 | Msa1374720:CDS | 55.0% | |
| AGCTCATCCACCGATGAAGG+AGG | - | tig0019570:619-638 | None:intergenic | 55.0% | |
| GCAGCTTTCACATCCGGATC+CGG | - | tig0019570:1325-1344 | None:intergenic | 55.0% | |
| GCTCCTAGGGTCTCACCTTA+TGG | - | tig0019570:1708-1727 | None:intergenic | 55.0% | |
| GGGCAATCGGGAAAACTTCC+TGG | - | tig0019570:2355-2374 | None:intergenic | 55.0% | |
| CTCCCAATTTCCGGGCAATC+GGG | - | tig0019570:2367-2386 | None:intergenic | 55.0% | |
| TTGCCCGGAAATTGGGAGAG+AGG | + | tig0019570:2369-2388 | Msa1374720:CDS | 55.0% | |
| TGCCCGGAAATTGGGAGAGA+GGG | + | tig0019570:2370-2389 | Msa1374720:CDS | 55.0% | |
| GACCCTCTCTCCCAATTTCC+GGG | - | tig0019570:2375-2394 | None:intergenic | 55.0% | |
| GGACCCTCTCTCCCAATTTC+CGG | - | tig0019570:2376-2395 | None:intergenic | 55.0% | |
| CTCACTGCTTGCACCAAGCA+GGG | - | tig0019570:2425-2444 | None:intergenic | 55.0% | |
| TCTCACTGCTTGCACCAAGC+AGG | - | tig0019570:2426-2445 | None:intergenic | 55.0% | |
| TGCACGCGTTGGAGAAGATG+AGG | + | tig0019570:2601-2620 | Msa1374720:CDS | 55.0% | |
| AACTTCCTGGTCCTCGTGTG+AGG | - | tig0019570:2777-2796 | None:intergenic | 55.0% | |
| ! | CACTGGCTGCTTGACAGGTT+TGG | - | tig0019570:2996-3015 | None:intergenic | 55.0% |
| !! | CAGCCAGTGAGAAAGGTGCT+TGG | + | tig0019570:3007-3026 | Msa1374720:CDS | 55.0% |
| ! | GATGATAACGAGGGTGGTGG+TGG | + | tig0019570:3133-3152 | Msa1374720:CDS | 55.0% |
| ATCTACCAGCTGCCTGGAAG+AGG | - | tig0019570:3161-3180 | None:intergenic | 55.0% | |
| TAAGAAAAAGCGGGGGCAGG+AGG | + | tig0019570:3180-3199 | Msa1374720:CDS | 55.0% | |
| GGAAAGAGGAAACACGCCTC+GGG | + | tig0019570:3407-3426 | Msa1374720:CDS | 55.0% | |
| ! | AGAATAGAAGGGGAGGGTGC+AGG | - | tig0019570:4412-4431 | None:intergenic | 55.0% |
| GGGGAACAACAATAGAGCCC+AGG | - | tig0019570:4615-4634 | None:intergenic | 55.0% | |
| ACCACTGCTTGCTTGAGAGG+GGG | - | tig0019570:4634-4653 | None:intergenic | 55.0% | |
| ! | CCCAAAGACTGCTGCTTCTG+AGG | + | tig0019570:6259-6278 | Msa1374720:CDS | 55.0% |
| CCCTCAGAAGCAGCAGTCTT+TGG | - | tig0019570:6263-6282 | None:intergenic | 55.0% | |
| GAGGGAAAGCCCCCAAAAAG+TGG | + | tig0019570:6278-6297 | Msa1374720:CDS | 55.0% | |
| AAGTCCACTGTCGACAGTGG+TGG | + | tig0019570:6305-6324 | Msa1374720:CDS | 55.0% | |
| ACTGTCGACAGTGGTGGCAA+GGG | + | tig0019570:6311-6330 | Msa1374720:CDS | 55.0% | |
| TCAAGTCGCTGCAGTGCCCA+GGG | - | tig0019570:1202-1221 | None:intergenic | 60.0% | |
| GAGAGGGTCCTCGAAAGCTG+TGG | + | tig0019570:2386-2405 | Msa1374720:CDS | 60.0% | |
| AACGATGGGGTTGCACGCGT+TGG | + | tig0019570:2590-2609 | Msa1374720:CDS | 60.0% | |
| GAGTTCCTCACACGAGGACC+AGG | + | tig0019570:2769-2788 | Msa1374720:CDS | 60.0% | |
| GGGAGGCTGTCACTAGGTGA+AGG | - | tig0019570:2857-2876 | None:intergenic | 60.0% | |
| TCGTCAGGGAGGCTGTCACT+AGG | - | tig0019570:2863-2882 | None:intergenic | 60.0% | |
| !! | GTGGTGGTGGATCCTCTTCC+AGG | + | tig0019570:3146-3165 | Msa1374720:CDS | 60.0% |
| TGGATCCTCTTCCAGGCAGC+TGG | + | tig0019570:3153-3172 | Msa1374720:CDS | 60.0% | |
| TCCCCCTCTCAAGCAAGCAG+TGG | + | tig0019570:4630-4649 | Msa1374720:intron | 60.0% | |
| CTTGCCACCACTGTCGACAG+TGG | - | tig0019570:6312-6331 | None:intergenic | 60.0% | |
| CACTGTCGACAGTGGTGGCA+AGG | + | tig0019570:6310-6329 | Msa1374720:CDS | 60.0% | |
| CTGTCGACAGTGGTGGCAAG+GGG | + | tig0019570:6312-6331 | Msa1374720:CDS | 60.0% | |
| CTCAAGTCGCTGCAGTGCCC+AGG | - | tig0019570:1203-1222 | None:intergenic | 65.0% | |
| TTTCCCTGGCCCGTGTCCTC+TGG | + | tig0019570:6558-6577 | Msa1374720:three_prime_UTR | 65.0% | |
| TCACCAGAGGACACGGGCCA+GGG | - | tig0019570:6564-6583 | None:intergenic | 65.0% | |
| TTCACCAGAGGACACGGGCC+AGG | - | tig0019570:6565-6584 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0019570 | gene | 224 | 6848 | 224 | ID=Msa1374720;Name=Msa1374720 |
| tig0019570 | mRNA | 224 | 6848 | 224 | ID=Msa1374720-mRNA-1;Parent=Msa1374720;Name=Msa1374720-mRNA-1;_AED=0.07;_eAED=0.07;_QI=329|1|1|1|1|1|12|376|805 |
| tig0019570 | exon | 224 | 654 | 224 | ID=Msa1374720-mRNA-1:exon:4077;Parent=Msa1374720-mRNA-1 |
| tig0019570 | exon | 1214 | 1417 | 1214 | ID=Msa1374720-mRNA-1:exon:4078;Parent=Msa1374720-mRNA-1 |
| tig0019570 | exon | 1530 | 1711 | 1530 | ID=Msa1374720-mRNA-1:exon:4079;Parent=Msa1374720-mRNA-1 |
| tig0019570 | exon | 2110 | 2236 | 2110 | ID=Msa1374720-mRNA-1:exon:4080;Parent=Msa1374720-mRNA-1 |
| tig0019570 | exon | 2356 | 3201 | 2356 | ID=Msa1374720-mRNA-1:exon:4081;Parent=Msa1374720-mRNA-1 |
| tig0019570 | exon | 3332 | 3439 | 3332 | ID=Msa1374720-mRNA-1:exon:4082;Parent=Msa1374720-mRNA-1 |
| tig0019570 | exon | 3638 | 3711 | 3638 | ID=Msa1374720-mRNA-1:exon:4083;Parent=Msa1374720-mRNA-1 |
| tig0019570 | exon | 4331 | 4382 | 4331 | ID=Msa1374720-mRNA-1:exon:4084;Parent=Msa1374720-mRNA-1 |
| tig0019570 | exon | 4846 | 4932 | 4846 | ID=Msa1374720-mRNA-1:exon:4085;Parent=Msa1374720-mRNA-1 |
| tig0019570 | exon | 5005 | 5048 | 5005 | ID=Msa1374720-mRNA-1:exon:4086;Parent=Msa1374720-mRNA-1 |
| tig0019570 | exon | 5326 | 5397 | 5326 | ID=Msa1374720-mRNA-1:exon:4087;Parent=Msa1374720-mRNA-1 |
| tig0019570 | exon | 5953 | 6848 | 5953 | ID=Msa1374720-mRNA-1:exon:4088;Parent=Msa1374720-mRNA-1 |
| tig0019570 | five_prime_UTR | 224 | 552 | 224 | ID=Msa1374720-mRNA-1:five_prime_utr;Parent=Msa1374720-mRNA-1 |
| tig0019570 | CDS | 553 | 654 | 553 | ID=Msa1374720-mRNA-1:cds;Parent=Msa1374720-mRNA-1 |
| tig0019570 | CDS | 1214 | 1417 | 1214 | ID=Msa1374720-mRNA-1:cds;Parent=Msa1374720-mRNA-1 |
| tig0019570 | CDS | 1530 | 1711 | 1530 | ID=Msa1374720-mRNA-1:cds;Parent=Msa1374720-mRNA-1 |
| tig0019570 | CDS | 2110 | 2236 | 2110 | ID=Msa1374720-mRNA-1:cds;Parent=Msa1374720-mRNA-1 |
| tig0019570 | CDS | 2356 | 3201 | 2356 | ID=Msa1374720-mRNA-1:cds;Parent=Msa1374720-mRNA-1 |
| tig0019570 | CDS | 3332 | 3439 | 3332 | ID=Msa1374720-mRNA-1:cds;Parent=Msa1374720-mRNA-1 |
| tig0019570 | CDS | 3638 | 3711 | 3638 | ID=Msa1374720-mRNA-1:cds;Parent=Msa1374720-mRNA-1 |
| tig0019570 | CDS | 4331 | 4382 | 4331 | ID=Msa1374720-mRNA-1:cds;Parent=Msa1374720-mRNA-1 |
| tig0019570 | CDS | 4846 | 4932 | 4846 | ID=Msa1374720-mRNA-1:cds;Parent=Msa1374720-mRNA-1 |
| tig0019570 | CDS | 5005 | 5048 | 5005 | ID=Msa1374720-mRNA-1:cds;Parent=Msa1374720-mRNA-1 |
| tig0019570 | CDS | 5326 | 5397 | 5326 | ID=Msa1374720-mRNA-1:cds;Parent=Msa1374720-mRNA-1 |
| tig0019570 | CDS | 5953 | 6472 | 5953 | ID=Msa1374720-mRNA-1:cds;Parent=Msa1374720-mRNA-1 |
| tig0019570 | three_prime_UTR | 6473 | 6848 | 6473 | ID=Msa1374720-mRNA-1:three_prime_utr;Parent=Msa1374720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
