AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0737560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0737560 MtrunA17_Chr1g0190351 95.530 962 43 0 1 962 33 994 0.0 1883
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0737560 AT2G21440.1 47.161 1039 436 20 1 962 1 1003 0.0 806

Find 217 sgRNAs with CRISPR-Local

Find 603 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCTTCCTTTGGTTCTTT+TGG 0.103039 5_1:-54814010 None:intergenic
TCTGTTTCCTTGGAAGTTTC+AGG 0.151548 5_1:-54819073 None:intergenic
TGCTTCTGGGATGGGTATTT+TGG 0.157301 5_1:+54819377 Msa0737560:CDS
CGTTACGAAGTTTCAGTTTC+TGG 0.161347 5_1:-54820569 None:intergenic
CCTTGTTCGCTATTTGAATT+TGG 0.165477 5_1:-54820738 None:intergenic
TTAACAGTTTCCTTTGATTT+TGG 0.169714 5_1:-54818995 None:intergenic
ACTGAATCTTTGTTCTTCTT+TGG 0.190926 5_1:-54821056 None:intergenic
GGGGTTCTCTTTCTGTCTTT+TGG 0.201997 5_1:-54820802 None:intergenic
AAGAAAGAAGACGCGATATT+TGG 0.226860 5_1:+54820978 Msa0737560:CDS
TCAACTGCCAATACTGCTTC+TGG 0.228699 5_1:+54819363 Msa0737560:CDS
GGTAAAGGGTAGACCATTAA+AGG 0.229384 5_1:+54819398 Msa0737560:CDS
GTTGCTAGAACTGTTATATT+TGG 0.244405 5_1:+54814399 Msa0737560:CDS
AGAGCCTTTAAAACCTTTAA+TGG 0.253378 5_1:-54819411 None:intergenic
CACCCGGTCCATATTGTCTT+TGG 0.258176 5_1:+54812143 Msa0737560:five_prime_UTR
TTTCATCTGCGGGGCCTGTA+TGG 0.269359 5_1:+54816022 Msa0737560:CDS
GATAAAGACAGCGGATTATC+TGG 0.273260 5_1:+54813965 Msa0737560:CDS
AGGCCAAAGAAAATGAAATA+AGG 0.273524 5_1:+54815992 Msa0737560:intron
AAACTCAATGGATCGAAGTT+TGG 0.305477 5_1:+54816328 Msa0737560:CDS
TCCACAATGGGCCGATGTTC+AGG 0.311484 5_1:-54820528 None:intergenic
CACTTCGGAATTTGTACTCT+TGG 0.314322 5_1:-54820823 None:intergenic
ACTTCGGAATTTGTACTCTT+GGG 0.316199 5_1:-54820822 None:intergenic
TTGCCCGCCGAAGACGCTTT+TGG 0.316252 5_1:-54820864 None:intergenic
TCTACGCAACATCGTGGTTT+TGG 0.321066 5_1:+54812631 Msa0737560:CDS
TACTACAACCAAAGACAATA+TGG 0.331246 5_1:-54812151 None:intergenic
TAACCAACCTGCCGAATTAC+AGG 0.332513 5_1:-54820049 None:intergenic
CAATCACAACCTTCTTCCTT+TGG 0.333819 5_1:-54814019 None:intergenic
TGTCAGAAACCTTCCTTTCA+AGG 0.342388 5_1:+54815887 Msa0737560:CDS
CAAATCATCTTCTGTTTCCT+TGG 0.348953 5_1:-54819083 None:intergenic
ATTATTTACAGATTCATCTT+TGG 0.350195 5_1:-54818942 None:intergenic
GTCGTCTCATAGCTGTTGAT+TGG 0.358840 5_1:+54816353 Msa0737560:CDS
AACTCAATGGATCGAAGTTT+GGG 0.358983 5_1:+54816329 Msa0737560:CDS
AAAATCAAAGGAAACTGTTA+AGG 0.370756 5_1:+54818997 Msa0737560:CDS
TTAGAAACAAAGAGTGTTAA+GGG 0.371228 5_1:-54812316 None:intergenic
TTGTTTCATGGTTACTCAAA+AGG 0.372314 5_1:+54812493 Msa0737560:CDS
AAGCAGGGGAAAAGGTTTCT+AGG 0.374787 5_1:+54821027 Msa0737560:CDS
CTGAGAGTTAGTGAAGGAAT+AGG 0.375168 5_1:-54812344 None:intergenic
TTTGATTATTTGGTTCAAAC+TGG 0.381543 5_1:-54821249 None:intergenic
CTATTAAGCATCCCCTTTCA+AGG 0.383007 5_1:+54814490 Msa0737560:CDS
CACCATGACTCTGGCCATCT+TGG 0.383423 5_1:-54820899 None:intergenic
GCTGAAACCCCTTCGGCAGC+TGG 0.384100 5_1:-54819632 None:intergenic
AGAAAGTCCAAAAGCGTCTT+CGG 0.389500 5_1:+54820857 Msa0737560:CDS
AGAACCCTTGTGTGAGAACT+TGG 0.390972 5_1:-54821129 None:intergenic
CTCTGAAGCAGGAGCATCAT+TGG 0.391724 5_1:-54816407 None:intergenic
AAAGGCTCTGGACAAGAAAT+CGG 0.400061 5_1:+54819425 Msa0737560:CDS
CACCGCCAAGCCAGAGAAAT+CGG 0.405483 5_1:+54814456 Msa0737560:CDS
AAATCGTTGCTTCACTTCTT+CGG 0.405889 5_1:-54819149 None:intergenic
ATCTAATTCAAAGGGAAGAT+TGG 0.406524 5_1:-54819125 None:intergenic
ACCATGAAACAACGTCTAAC+AGG 0.407399 5_1:-54812482 None:intergenic
ACCTGTTAGACGTTGTTTCA+TGG 0.408406 5_1:+54812481 Msa0737560:CDS
GAACAAACTTTCAGTGAAGT+TGG 0.409004 5_1:+54812458 Msa0737560:CDS
AAGCTTCCATTTCTGAGTCT+TGG 0.414414 5_1:-54815862 None:intergenic
AGACCACCGCAATCTTTACT+TGG 0.416144 5_1:+54819488 Msa0737560:CDS
ATTAGAAACAAAGAGTGTTA+AGG 0.416484 5_1:-54812317 None:intergenic
CTTTGGTTGTAGTAGTAACC+AGG 0.420210 5_1:+54812160 Msa0737560:five_prime_UTR
CATCTCTTCATCATCGGCGA+TGG 0.421269 5_1:+54812240 Msa0737560:exon
AGCGTAAACTCCTGGATTGT+CGG 0.421557 5_1:-54820655 None:intergenic
CCAAGCAAACACCTGTAATT+CGG 0.424020 5_1:+54820038 Msa0737560:CDS
TTCATCTGCGGGGCCTGTAT+GGG 0.425013 5_1:+54816023 Msa0737560:CDS
TGAGCTGAAGAACGGTTCAT+TGG 0.431497 5_1:+54813693 Msa0737560:CDS
GGCCAAAGAAAATGAAATAA+GGG 0.433746 5_1:+54815993 Msa0737560:intron
CAATCATAAAAGTGGTTTAG+AGG 0.434562 5_1:+54821203 Msa0737560:exon
TTGGTCACTTGGTGGAGAAC+AGG 0.437156 5_1:-54819202 None:intergenic
TCCTGTGTGCAGTCTTTCGA+AGG 0.439780 5_1:+54816168 Msa0737560:intron
ACACACAGTGCCGATTTCTC+TGG 0.447857 5_1:-54814466 None:intergenic
TGCCGATTTCTCTGGCTTGG+CGG 0.449281 5_1:-54814458 None:intergenic
CAACTGCCAATACTGCTTCT+GGG 0.451408 5_1:+54819364 Msa0737560:CDS
AATCTAAACAGCTTAGGAAA+TGG 0.456031 5_1:+54821177 Msa0737560:CDS
AAAAGTGGTTTAGAGGGGTT+TGG 0.456038 5_1:+54821210 Msa0737560:exon
TGAGAGTTAGTGAAGGAATA+GGG 0.456317 5_1:-54812343 None:intergenic
TGAACCGTTCTTCAGCTCAA+TGG 0.460449 5_1:-54813689 None:intergenic
CTAGGACATACTTGGTCACT+TGG 0.461965 5_1:-54819213 None:intergenic
CAGAAGATCATTCCTTGAAA+GGG 0.462491 5_1:-54814502 None:intergenic
AATCATAAAAGTGGTTTAGA+GGG 0.462549 5_1:+54821204 Msa0737560:exon
GTTCCATGAGCGTAAACTCC+TGG 0.464858 5_1:-54820663 None:intergenic
GCCAATACTGCTTCTGGGAT+GGG 0.465705 5_1:+54819369 Msa0737560:CDS
TTGTCTTGTGAATTCTGCTA+TGG 0.470061 5_1:+54814422 Msa0737560:CDS
CCAAGAACAAGCAGGGGAAA+AGG 0.470314 5_1:+54821019 Msa0737560:CDS
ACCCATCCCAGAAGCAGTAT+TGG 0.471074 5_1:-54819370 None:intergenic
CCGAATTACAGGTGTTTGCT+TGG 0.472209 5_1:-54820038 None:intergenic
TTTGGGCACGCCAACTTGGT+GGG 0.473129 5_1:+54815158 Msa0737560:CDS
ACTGTTTGGGCACGCCAACT+TGG 0.473827 5_1:+54815154 Msa0737560:CDS
CGTTCTTCAGCTCAATGGCT+TGG 0.475932 5_1:-54813684 None:intergenic
TAGGAGGGACTTATTCTTGA+CGG 0.477564 5_1:+54819605 Msa0737560:intron
CAGGCGATTCGAAAACTCAA+TGG 0.479592 5_1:+54816316 Msa0737560:intron
TGCAGGCGTCCACGAGGGAC+TGG 0.480915 5_1:+54819297 Msa0737560:intron
AGAGTTCTTAACAATAATCC+TGG 0.483615 5_1:+54820279 Msa0737560:CDS
GCGTAAACTCCTGGATTGTC+GGG 0.483887 5_1:-54820654 None:intergenic
TGCCAATACTGCTTCTGGGA+TGG 0.486395 5_1:+54819368 Msa0737560:CDS
TGTTTCATGGTTACTCAAAA+GGG 0.486741 5_1:+54812494 Msa0737560:CDS
GTTTGGGCACGCCAACTTGG+TGG 0.487001 5_1:+54815157 Msa0737560:CDS
TAAGAAAAGCAAAGCAATGA+AGG 0.487047 5_1:+54812264 Msa0737560:CDS
CAGTGCCGATTTCTCTGGCT+TGG 0.490360 5_1:-54814461 None:intergenic
AGCATCAATCAACCTTGATC+CGG 0.491692 5_1:-54813784 None:intergenic
CTATTCCTTCACTAACTCTC+AGG 0.495586 5_1:+54812345 Msa0737560:CDS
GATTTCTTTAGGACAACAAA+AGG 0.498067 5_1:+54818736 Msa0737560:intron
CAAGGTGGTAAAGTGCCAAA+TGG 0.499530 5_1:+54820756 Msa0737560:CDS
TCGTCTCATAGCTGTTGATT+GGG 0.499678 5_1:+54816354 Msa0737560:CDS
AAGAACAGCCTTCTTGCAGC+AGG 0.499780 5_1:-54815045 None:intergenic
TTCTCACACAAGGGTTCTCA+AGG 0.501028 5_1:+54821134 Msa0737560:CDS
ACGGTTCATTGGTTGGTGAC+CGG 0.501056 5_1:+54813704 Msa0737560:CDS
AATGGTTCCAATCATAAAAG+TGG 0.502021 5_1:+54821195 Msa0737560:exon
AGGGAGCCAAGACTCAGAAA+TGG 0.503890 5_1:+54815856 Msa0737560:intron
GAAAGTAGTAGGAAAATCTC+AGG 0.503966 5_1:+54820954 Msa0737560:CDS
GTAATTTAGCACCATGACTC+TGG 0.504247 5_1:-54820908 None:intergenic
AGAAATATCTGAAACCTTGT+CGG 0.504739 5_1:-54819047 None:intergenic
TACAGATTCATCTTTGGCAG+AGG 0.505508 5_1:-54818936 None:intergenic
ATAGTTCCATTGAAAGTAGT+AGG 0.505722 5_1:+54820943 Msa0737560:CDS
GGGAAAAGGTTTCTAGGAAA+AGG 0.509364 5_1:+54821033 Msa0737560:CDS
TGAAAATCGAAGATCAAAAC+CGG 0.510715 5_1:+54813765 Msa0737560:CDS
ATGCAAAACCAAGAACAAGC+AGG 0.511718 5_1:+54821011 Msa0737560:CDS
TCTTCGGTATCTAATTCAAA+GGG 0.513395 5_1:-54819133 None:intergenic
CTTCGGAATTTGTACTCTTG+GGG 0.515980 5_1:-54820821 None:intergenic
GCAGAAGATCATTCCTTGAA+AGG 0.517219 5_1:-54814503 None:intergenic
TCAAGAGCAAACTCCACAAT+GGG 0.517340 5_1:-54820540 None:intergenic
TCAACAGATCGAACCTTGAA+AGG 0.517773 5_1:-54815900 None:intergenic
GGAATGAATACCTCCCATAC+AGG 0.518282 5_1:-54816036 None:intergenic
ATCTCTTCATCATCGGCGAT+GGG 0.520098 5_1:+54812241 Msa0737560:exon
CGAAGATCAAAACCGGATCA+AGG 0.520422 5_1:+54813772 Msa0737560:CDS
ACTGACAAAGAATCTGATCA+AGG 0.522199 5_1:+54818806 Msa0737560:CDS
ATCAGTGGCTGAAACCCCTT+CGG 0.522666 5_1:-54819639 None:intergenic
TTCTTCGGTATCTAATTCAA+AGG 0.523243 5_1:-54819134 None:intergenic
GACGGAACTCCAGCTGCCGA+AGG 0.523716 5_1:+54819623 Msa0737560:CDS
CAATGATGCTCCTGCTTCAG+AGG 0.523848 5_1:+54816408 Msa0737560:CDS
AAAGAACAAGCCAAAATCAA+AGG 0.524190 5_1:+54818985 Msa0737560:CDS
AATGATAAACCCGACAATCC+AGG 0.524329 5_1:+54820645 Msa0737560:CDS
CAGATCGAACCTTGAAAGGA+AGG 0.524767 5_1:-54815896 None:intergenic
GAAATATTTATAGTTTGGAA+AGG 0.525585 5_1:+54819882 Msa0737560:intron
TTGTAATGACGCAGCAGATG+AGG 0.526196 5_1:+54814191 Msa0737560:CDS
GAACAAAGATTCAGTAGGGA+AGG 0.527716 5_1:+54821064 Msa0737560:CDS
AGTCCAAAAGCGTCTTCGGC+GGG 0.531268 5_1:+54820861 Msa0737560:CDS
AAATCAAAGGAAACTGTTAA+GGG 0.532208 5_1:+54818998 Msa0737560:CDS
CCAAAAGAACCAAAGGAAGA+AGG 0.533227 5_1:+54814010 Msa0737560:CDS
AAGACGCGATATTTGGAAAG+AGG 0.533754 5_1:+54820985 Msa0737560:CDS
AAGAAGAACAAAGATTCAGT+AGG 0.534680 5_1:+54821059 Msa0737560:CDS
AAATTACCTTCCTCTGAAGC+AGG 0.535871 5_1:-54816418 None:intergenic
TGCATTATCAGCTGCTTCCG+CGG 0.535875 5_1:-54819337 None:intergenic
TGTAATGACGCAGCAGATGA+GGG 0.537350 5_1:+54814192 Msa0737560:CDS
TTCCCAGGCCTGCTGCAAGA+AGG 0.537740 5_1:+54815037 Msa0737560:intron
TTCTTTCGATGATATCACTT+CGG 0.542100 5_1:-54820838 None:intergenic
TTCTAAGCCTGAAACTTCCA+AGG 0.542108 5_1:+54819066 Msa0737560:CDS
AAGGGTTCTCAAGGAAATGA+TGG 0.544012 5_1:+54821143 Msa0737560:CDS
CCTGTGTGCAGTCTTTCGAA+GGG 0.545229 5_1:+54816169 Msa0737560:intron
GACACAATAGAGGGCAATGA+AGG 0.546836 5_1:+54813917 Msa0737560:intron
GATGCTCCTGCTTCAGAGGA+AGG 0.546927 5_1:+54816412 Msa0737560:CDS
GGACATACTTGGTCACTTGG+TGG 0.548184 5_1:-54819210 None:intergenic
TGCAAAACCAAGAACAAGCA+GGG 0.550150 5_1:+54821012 Msa0737560:CDS
ACGGAACTCCAGCTGCCGAA+GGG 0.553197 5_1:+54819624 Msa0737560:CDS
TCATTGACCACAGAAACCTT+CGG 0.555563 5_1:+54820504 Msa0737560:intron
TTGGGCACGCCAACTTGGTG+GGG 0.556141 5_1:+54815159 Msa0737560:CDS
ACTTTACCTCCCCACCAAGT+TGG 0.556299 5_1:-54815168 None:intergenic
GCAAACACCTGTAATTCGGC+AGG 0.559184 5_1:+54820042 Msa0737560:CDS
GGCACGCCAACTTGGTGGGG+AGG 0.559247 5_1:+54815162 Msa0737560:CDS
TTCAGTTCCAAAAGAACCAA+AGG 0.560178 5_1:+54814003 Msa0737560:CDS
AAAGCTACAGTATCAGCAGC+TGG 0.561838 5_1:+54820593 Msa0737560:CDS
CAACCAAAGACAATATGGAC+CGG 0.562154 5_1:-54812146 None:intergenic
ATTCAAGAAAAGCGACTCCA+CGG 0.563574 5_1:-54820224 None:intergenic
CTGAAGAACGGTTCATTGGT+TGG 0.563589 5_1:+54813697 Msa0737560:CDS
CAAGAAATCGGCTCATGACA+AGG 0.564214 5_1:+54819437 Msa0737560:CDS
AGAAGAACAAAGATTCAGTA+GGG 0.570029 5_1:+54821060 Msa0737560:CDS
GAAAGATGGCAGGAAAGGAA+AGG 0.571880 5_1:+54820179 Msa0737560:CDS
ATCTGCGGGGCCTGTATGGG+AGG 0.572499 5_1:+54816026 Msa0737560:CDS
TCCTGAACATCGGCCCATTG+TGG 0.574904 5_1:+54820527 Msa0737560:CDS
GGGCCGATGTTCAGGACCGA+AGG 0.576328 5_1:-54820520 None:intergenic
GTTGGCTAACCGTGTTATGT+TGG 0.580825 5_1:-54821320 None:intergenic
CATGGTGCTAAATTACATGA+AGG 0.582212 5_1:+54820915 Msa0737560:CDS
TTTGGTTGTAGTAGTAACCA+GGG 0.583277 5_1:+54812161 Msa0737560:five_prime_UTR
CCAAATTCAAATAGCGAACA+AGG 0.584745 5_1:+54820738 Msa0737560:CDS
CTGACAAAGAATCTGATCAA+GGG 0.585118 5_1:+54818807 Msa0737560:CDS
TAAGAACTCTCAACGCAACA+AGG 0.587382 5_1:-54820266 None:intergenic
AATCCAGGAGTTTACGCTCA+TGG 0.588207 5_1:+54820660 Msa0737560:CDS
CCGCAATCTTTACTTGGCGA+AGG 0.588434 5_1:+54819494 Msa0737560:CDS
CGGAACTCCAGCTGCCGAAG+GGG 0.589924 5_1:+54819625 Msa0737560:CDS
ATCATAAAAGTGGTTTAGAG+GGG 0.594730 5_1:+54821205 Msa0737560:exon
TGACAAACCAGCAAAAGACT+TGG 0.595099 5_1:+54820713 Msa0737560:CDS
TTCAAGAAAAGCGACTCCAC+GGG 0.595349 5_1:-54820223 None:intergenic
AACCAAGATGGCCAGAGTCA+TGG 0.597159 5_1:+54820897 Msa0737560:CDS
AGGAATGATCTTCTGCAGCA+TGG 0.605435 5_1:+54814510 Msa0737560:CDS
TACCCTGTGTCGGACTTCTG+TGG 0.606080 5_1:-54816057 None:intergenic
TAATGACGCAGCAGATGAGG+GGG 0.606529 5_1:+54814194 Msa0737560:CDS
ATTCCACAGAAGTCCGACAC+AGG 0.608649 5_1:+54816054 Msa0737560:CDS
TATGGACCGGGTGGCCCGTG+TGG 0.609584 5_1:-54812133 None:intergenic
ATCAAGAGCAAACTCCACAA+TGG 0.611104 5_1:-54820541 None:intergenic
AAGTCCAAAAGCGTCTTCGG+CGG 0.614715 5_1:+54820860 Msa0737560:CDS
TTTCTGTTGTTGCCGTTGTG+AGG 0.616515 5_1:-54820618 None:intergenic
AAGGAATATATACCCTGTGT+CGG 0.616888 5_1:-54816067 None:intergenic
TGACAAAGAATCTGATCAAG+GGG 0.619765 5_1:+54818808 Msa0737560:CDS
TAGATCCAAGTTCTCACACA+AGG 0.623451 5_1:+54821124 Msa0737560:CDS
GTAATGACGCAGCAGATGAG+GGG 0.624059 5_1:+54814193 Msa0737560:CDS
CAAGCCATTGAGCTGAAGAA+CGG 0.627871 5_1:+54813685 Msa0737560:CDS
CCAAATGGAAAATCTCCTCA+AGG 0.629918 5_1:+54820771 Msa0737560:CDS
AAGCTGAAAAGTAACCAAGA+TGG 0.637677 5_1:+54820885 Msa0737560:CDS
AGAAGATCATTCCTTGAAAG+GGG 0.638195 5_1:-54814501 None:intergenic
AACCAAAGACAATATGGACC+GGG 0.638346 5_1:-54812145 None:intergenic
AAACCTTCGGTCCTGAACAT+CGG 0.642171 5_1:+54820517 Msa0737560:CDS
CAAGAACAGCAGTATTCCCG+TGG 0.650331 5_1:+54820207 Msa0737560:CDS
AGATAGTAGTACTACTACTG+AGG 0.650531 5_1:+54818769 Msa0737560:CDS
GCAAAACCAAGAACAAGCAG+GGG 0.651326 5_1:+54821013 Msa0737560:CDS
TAGTGATATTGATAGTGTTG+TGG 0.658825 5_1:+54818835 Msa0737560:CDS
CTCAATGCAGGCGTCCACGA+GGG 0.661595 5_1:+54819292 Msa0737560:intron
TGATATTGATAGTGTTGTGG+AGG 0.663472 5_1:+54818838 Msa0737560:CDS
TTCCACAGAAGTCCGACACA+GGG 0.667711 5_1:+54816055 Msa0737560:CDS
TTAAGAAAACCAGTCCCTCG+TGG 0.669577 5_1:-54819306 None:intergenic
AAATACCTGAGAGTTAGTGA+AGG 0.671557 5_1:-54812350 None:intergenic
TCAGGGTCTACGCAACATCG+TGG 0.673144 5_1:+54812625 Msa0737560:intron
AACATCTAAAGAGTCCGACA+AGG 0.679032 5_1:+54819033 Msa0737560:CDS
ACTCAATGCAGGCGTCCACG+AGG 0.680693 5_1:+54819291 Msa0737560:intron
GCAATGAAGGAAAATAGCGA+CGG 0.697380 5_1:+54812277 Msa0737560:CDS
AAGAACTCTCAACGCAACAA+GGG 0.697627 5_1:-54820265 None:intergenic
CAAAGACAATATGGACCGGG+TGG 0.697956 5_1:-54812142 None:intergenic
AGATCCAAGTTCTCACACAA+GGG 0.701976 5_1:+54821125 Msa0737560:CDS
TCGCCAAGTAAAGATTGCGG+TGG 0.704028 5_1:-54819491 None:intergenic
AGATTCAGTAGGGAAGGACA+TGG 0.712089 5_1:+54821070 Msa0737560:CDS
CAGCAGCTGGCTCCTCACAA+CGG 0.721818 5_1:+54820606 Msa0737560:CDS
AATGGAAAATCTCCTCAAGG+AGG 0.725686 5_1:+54820774 Msa0737560:CDS
CCTTCGCCAAGTAAAGATTG+CGG 0.731180 5_1:-54819494 None:intergenic
AATGACGCAGCAGATGAGGG+GGG 0.732596 5_1:+54814195 Msa0737560:CDS
AATTCAAATAGCGAACAAGG+TGG 0.748003 5_1:+54820741 Msa0737560:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAGAATGATAAATAAAAA+TGG - chr5_1:54812403-54812422 None:intergenic 10.0%
!! TACTTTATTATTATCAATTA+GGG - chr5_1:54813068-54813087 None:intergenic 10.0%
!! TTCTAATAATATATGTAAAA+CGG - chr5_1:54813587-54813606 None:intergenic 10.0%
!! TGTTTAGTTATAAAATAAAA+AGG - chr5_1:54814828-54814847 None:intergenic 10.0%
!!! AAATAAAAACAATTTTAACT+AGG - chr5_1:54815560-54815579 None:intergenic 10.0%
!!! ATATAACATAATTTTTTGTT+TGG + chr5_1:54815931-54815950 Msa0737560:intron 10.0%
!! TTATTATATTTATGTATATG+TGG - chr5_1:54816784-54816803 None:intergenic 10.0%
!! ACTTATTAAAGATAAAAAAA+AGG + chr5_1:54817612-54817631 Msa0737560:intron 10.0%
!! ATTCATAATATGAAATAAAA+GGG - chr5_1:54818103-54818122 None:intergenic 10.0%
!! TATTCATAATATGAAATAAA+AGG - chr5_1:54818104-54818123 None:intergenic 10.0%
!!! TCTTTTAAATTGTAATTAAT+AGG + chr5_1:54819586-54819605 Msa0737560:intron 10.0%
!!! ATTTTAATATAAACAACTTA+GGG + chr5_1:54821374-54821393 Msa0737560:three_prime_UTR 10.0%
!!! TCATTTTCTTAAATTACTAT+CGG - chr5_1:54812954-54812973 None:intergenic 15.0%
!! CTACTTTATTATTATCAATT+AGG - chr5_1:54813069-54813088 None:intergenic 15.0%
!!! AATTGATAATAATAAAGTAG+CGG + chr5_1:54813069-54813088 Msa0737560:intron 15.0%
!!! GTTTTATGTATAATTGTTAT+TGG + chr5_1:54814573-54814592 Msa0737560:intron 15.0%
!! TCTATATAAAAGATACTATA+TGG - chr5_1:54815234-54815253 None:intergenic 15.0%
!!! GATTTTTTGTATTTGAATTT+TGG - chr5_1:54815387-54815406 None:intergenic 15.0%
!! ATTTACGAAATTCAAATTAT+AGG - chr5_1:54815681-54815700 None:intergenic 15.0%
!! ATAATTTGAATTTCGTAAAT+TGG + chr5_1:54815681-54815700 Msa0737560:intron 15.0%
!!! TTTTGTATTGGTTTTTAATT+TGG + chr5_1:54815753-54815772 Msa0737560:intron 15.0%
!! AACAAACTAAATATCATAAA+TGG - chr5_1:54815809-54815828 None:intergenic 15.0%
!!! AATTTTTCTCATTAATTTTC+TGG + chr5_1:54817088-54817107 Msa0737560:intron 15.0%
!!! TCATTTAAAAAAGTACTTTT+TGG - chr5_1:54817803-54817822 None:intergenic 15.0%
!!! AAAAAGTACTTTTTTAAATG+AGG + chr5_1:54817802-54817821 Msa0737560:intron 15.0%
!!! GTTATTGTTTTACTATTTAT+AGG - chr5_1:54818032-54818051 None:intergenic 15.0%
!! AAAAATAATTAAAAGATGTC+TGG - chr5_1:54818598-54818617 None:intergenic 15.0%
!! TTTAAATTGTAATTAATAGG+AGG + chr5_1:54819589-54819608 Msa0737560:intron 15.0%
!! TTAAATTGTAATTAATAGGA+GGG + chr5_1:54819590-54819609 Msa0737560:intron 15.0%
!! TTTGTGAAATATTTATAGTT+TGG + chr5_1:54819877-54819896 Msa0737560:intron 15.0%
!!! TTTTTGAAACATGAAAATTT+GGG - chr5_1:54819931-54819950 None:intergenic 15.0%
!!! CACTTTTACTTTTTTTTTAA+TGG - chr5_1:54821354-54821373 None:intergenic 15.0%
!!! GATTTTAATATAAACAACTT+AGG + chr5_1:54821373-54821392 Msa0737560:three_prime_UTR 15.0%
!!! TTTTAATATAAACAACTTAG+GGG + chr5_1:54821375-54821394 Msa0737560:three_prime_UTR 15.0%
!!! CAAATATCTATTTTTCTTTT+AGG + chr5_1:54821479-54821498 Msa0737560:three_prime_UTR 15.0%
!!! TTTTCAAATAATAGCTACAT+CGG + chr5_1:54813142-54813161 Msa0737560:intron 20.0%
!!! CAGTTTTTGAACTTTATAAT+AGG + chr5_1:54813423-54813442 Msa0737560:intron 20.0%
!!! AATATATTTTCGCTTGTTAT+AGG + chr5_1:54814632-54814651 Msa0737560:intron 20.0%
!! AGTTATAAAATAAAAAGGCT+TGG - chr5_1:54814823-54814842 None:intergenic 20.0%
!! CAAAAAATCTTAATAACTAC+AGG + chr5_1:54815398-54815417 Msa0737560:intron 20.0%
!! ATGCATTGTCTTAAAAAATA+GGG + chr5_1:54815464-54815483 Msa0737560:intron 20.0%
!!! TTTTTGCGTATTTTTTGTAT+TGG + chr5_1:54815741-54815760 Msa0737560:intron 20.0%
!! AATATCATAAATGGTAAACA+GGG - chr5_1:54815800-54815819 None:intergenic 20.0%
!! AAATATCATAAATGGTAAAC+AGG - chr5_1:54815801-54815820 None:intergenic 20.0%
!!! TCACTACTAAATATCTTTTT+TGG - chr5_1:54816385-54816404 None:intergenic 20.0%
!! ATAATAAATAGAGAAATGCT+AGG + chr5_1:54816797-54816816 Msa0737560:intron 20.0%
!! TAATAAATAGAGAAATGCTA+GGG + chr5_1:54816798-54816817 Msa0737560:intron 20.0%
!!! TGATAACAGTTTTTTTTTTG+AGG - chr5_1:54816926-54816945 None:intergenic 20.0%
!! TATTTATTAGAGAAATGCTA+GGG - chr5_1:54817586-54817605 None:intergenic 20.0%
!! TTATTTATTAGAGAAATGCT+AGG - chr5_1:54817587-54817606 None:intergenic 20.0%
!!! TATTGTTTATAGTTTTGTTG+TGG - chr5_1:54817714-54817733 None:intergenic 20.0%
!! ACAACAAAACTATAAACAAT+AGG + chr5_1:54817713-54817732 Msa0737560:intron 20.0%
!!! GTATTTCTTTTTGAATAGTA+TGG + chr5_1:54818160-54818179 Msa0737560:intron 20.0%
!! TCTAGTATTAAATTTATCAG+TGG + chr5_1:54818185-54818204 Msa0737560:intron 20.0%
!! AAATTAAAATTGTTATACCC+AGG - chr5_1:54818506-54818525 None:intergenic 20.0%
!! ATTATTTACAGATTCATCTT+TGG - chr5_1:54818945-54818964 None:intergenic 20.0%
!! GAAATATTTATAGTTTGGAA+AGG + chr5_1:54819882-54819901 Msa0737560:intron 20.0%
!!! TTTTGAAACATGAAAATTTG+GGG - chr5_1:54819930-54819949 None:intergenic 20.0%
!!! GTTTTTGAAACATGAAAATT+TGG - chr5_1:54819932-54819951 None:intergenic 20.0%
!! TTGTAACATTCAAAACATAA+TGG - chr5_1:54820135-54820154 None:intergenic 20.0%
!! ATTATATTACGAGAAAAACA+CGG - chr5_1:54820476-54820495 None:intergenic 20.0%
!!! TTAGAAACAAAGAGTGTTAA+GGG - chr5_1:54812319-54812338 None:intergenic 25.0%
!!! ATTAGAAACAAAGAGTGTTA+AGG - chr5_1:54812320-54812339 None:intergenic 25.0%
!! ACCATGTTTAATTGTTTTCA+GGG + chr5_1:54812608-54812627 Msa0737560:intron 25.0%
! ACATGATTCAGTGTAATTAT+AGG + chr5_1:54812973-54812992 Msa0737560:intron 25.0%
! CAAATTTCACTTACCAAAAA+TGG - chr5_1:54813289-54813308 None:intergenic 25.0%
! ACATCAATATACTGTGATTA+CGG - chr5_1:54813546-54813565 None:intergenic 25.0%
!! AATTTGTAACATGACTTTTC+TGG + chr5_1:54813613-54813632 Msa0737560:intron 25.0%
! AAAAATGATGATAAAGACAG+CGG + chr5_1:54813956-54813975 Msa0737560:CDS 25.0%
! CTCATTATCTCTTAATTTCA+TGG - chr5_1:54814276-54814295 None:intergenic 25.0%
! AAAGATACATCCATAATGAA+AGG - chr5_1:54814309-54814328 None:intergenic 25.0%
! AAGAAAAAAAACATAGAGCA+GGG - chr5_1:54814371-54814390 None:intergenic 25.0%
! AAAGAAAAAAAACATAGAGC+AGG - chr5_1:54814372-54814391 None:intergenic 25.0%
!!! GCTCTATGTTTTTTTTCTTT+TGG + chr5_1:54814372-54814391 Msa0737560:intron 25.0%
!!! TATGTTTTTTTTCTTTTGGC+AGG + chr5_1:54814376-54814395 Msa0737560:intron 25.0%
!!! ATGTTTTTTTTCTTTTGGCA+GGG + chr5_1:54814377-54814396 Msa0737560:intron 25.0%
! TTTCAAATTACAGAGAAGAT+AGG + chr5_1:54814551-54814570 Msa0737560:intron 25.0%
! AAATATGAACTGAAAAGAAC+AGG - chr5_1:54814665-54814684 None:intergenic 25.0%
! AAAGATTCTTTATACTGCTT+AGG + chr5_1:54814991-54815010 Msa0737560:intron 25.0%
! TTAGGATAGTAAGGTAATTA+TGG + chr5_1:54815009-54815028 Msa0737560:intron 25.0%
! ACATTGCATAAAAAAGAGAT+AGG + chr5_1:54815124-54815143 Msa0737560:CDS 25.0%
! CATGCATTGTCTTAAAAAAT+AGG + chr5_1:54815463-54815482 Msa0737560:intron 25.0%
!!! TTGGTTTTTAATTTGGTCAT+AGG + chr5_1:54815760-54815779 Msa0737560:intron 25.0%
!!! AACATTTTTGTTGTTGTATG+TGG + chr5_1:54815830-54815849 Msa0737560:intron 25.0%
!!! ACATTTTTGTTGTTGTATGT+GGG + chr5_1:54815831-54815850 Msa0737560:intron 25.0%
! TCTAACTACTTGACTAAATA+TGG + chr5_1:54815965-54815984 Msa0737560:intron 25.0%
! TTGCACATTCATTCAAAAAA+TGG - chr5_1:54816606-54816625 None:intergenic 25.0%
! AAATCCTATTGATGAAATTC+TGG + chr5_1:54816701-54816720 Msa0737560:intron 25.0%
! AATCCTATTGATGAAATTCT+GGG + chr5_1:54816702-54816721 Msa0737560:intron 25.0%
! TGAAAGAAATAGAGAGAAAA+TGG + chr5_1:54816751-54816770 Msa0737560:intron 25.0%
! ATGATGTGTTGGATTATTAT+TGG - chr5_1:54817528-54817547 None:intergenic 25.0%
! TATTTATGCTTTGTAGGATA+AGG - chr5_1:54817138-54817157 None:intergenic 25.0%
!!! ATGAAAATGATTTGGGTTTT+TGG + chr5_1:54817204-54817223 Msa0737560:intron 25.0%
! TTTCTGATTGAGTTTCAATT+TGG + chr5_1:54817360-54817379 Msa0737560:intron 25.0%
!! TCAGGTAAAGTATTAAAAAG+AGG + chr5_1:54817502-54817521 Msa0737560:intron 25.0%
! ATGATGTGTTGGATTATTAT+TGG + chr5_1:54817528-54817547 Msa0737560:intron 25.0%
!!! TGGTAGTTTGTAATTTGTTT+TGG - chr5_1:54817694-54817713 None:intergenic 25.0%
! TTGTGCTAGTTGTATATAAT+TGG + chr5_1:54818052-54818071 Msa0737560:intron 25.0%
! GAAATTCTGAGTAATGTTTA+AGG + chr5_1:54818130-54818149 Msa0737560:intron 25.0%
!! AAATTGTATTTTGCTACCAA+AGG + chr5_1:54818426-54818445 Msa0737560:intron 25.0%
!! AATTGTATTTTGCTACCAAA+GGG + chr5_1:54818427-54818446 Msa0737560:intron 25.0%
! AAAATAAAATAGTTGCCCTT+TGG - chr5_1:54818445-54818464 None:intergenic 25.0%
! ACATCTGTTATGATTTCTTT+AGG + chr5_1:54818725-54818744 Msa0737560:intron 25.0%
!!! TTAACAGTTTCCTTTGATTT+TGG - chr5_1:54818998-54819017 None:intergenic 25.0%
! AAAATCAAAGGAAACTGTTA+AGG + chr5_1:54818997-54819016 Msa0737560:CDS 25.0%
! AAATCAAAGGAAACTGTTAA+GGG + chr5_1:54818998-54819017 Msa0737560:CDS 25.0%
! CACACAAAAAATATTGTTCT+AGG - chr5_1:54819234-54819253 None:intergenic 25.0%
!!! TTTTCTTAAGTTTAAAACCG+CGG + chr5_1:54819320-54819339 Msa0737560:CDS 25.0%
!!! TAGACCATTAAAGGTTTTAA+AGG + chr5_1:54819407-54819426 Msa0737560:CDS 25.0%
! AAGAAATGAGAATAGTAAAG+TGG - chr5_1:54819751-54819770 None:intergenic 25.0%
!!! TGTTTTTCATTCATTGACTT+TGG - chr5_1:54819977-54819996 None:intergenic 25.0%
!!! CAGATAAAGATTTTGAAAGA+TGG + chr5_1:54820165-54820184 Msa0737560:intron 25.0%
! TATATTCACAATGGAGAAAT+GGG - chr5_1:54820320-54820339 None:intergenic 25.0%
! AAAAACAATCTAAACAGCTT+AGG + chr5_1:54821171-54821190 Msa0737560:CDS 25.0%
! AATCATAAAAGTGGTTTAGA+GGG + chr5_1:54821204-54821223 Msa0737560:exon 25.0%
!! TTTGATTATTTGGTTCAAAC+TGG - chr5_1:54821252-54821271 None:intergenic 25.0%
! CTTCAACTCATTTGATTATT+TGG - chr5_1:54821262-54821281 None:intergenic 25.0%
! GAAAAAATACCAACATAACA+CGG + chr5_1:54821311-54821330 Msa0737560:intron 25.0%
!! TTTTTAATGGAAGCTTTTGT+TGG - chr5_1:54821341-54821360 None:intergenic 25.0%
TACTACAACCAAAGACAATA+TGG - chr5_1:54812154-54812173 None:intergenic 30.0%
TAAGAAAAGCAAAGCAATGA+AGG + chr5_1:54812264-54812283 Msa0737560:CDS 30.0%
TTGTTTCATGGTTACTCAAA+AGG + chr5_1:54812493-54812512 Msa0737560:CDS 30.0%
TGTTTCATGGTTACTCAAAA+GGG + chr5_1:54812494-54812513 Msa0737560:CDS 30.0%
GGTAACTTACTAACTAACTA+AGG + chr5_1:54812515-54812534 Msa0737560:intron 30.0%
! CACCATGTTTAATTGTTTTC+AGG + chr5_1:54812607-54812626 Msa0737560:intron 30.0%
ACCCTGAAAACAATTAAACA+TGG - chr5_1:54812612-54812631 None:intergenic 30.0%
GATTCATTCATATGCATACA+TGG - chr5_1:54812711-54812730 None:intergenic 30.0%
! TAGAGTTTTCTGTAGTAGTA+CGG + chr5_1:54812881-54812900 Msa0737560:intron 30.0%
! TGTAATTATAGGTGTTGTGT+TGG + chr5_1:54812984-54813003 Msa0737560:intron 30.0%
!! ATTCTTGCATTGTTTTGTAG+TGG + chr5_1:54813166-54813185 Msa0737560:intron 30.0%
TCTGGTGAGATTATTCATTA+CGG - chr5_1:54813236-54813255 None:intergenic 30.0%
CCTTCTTTACTTACAAAGAT+GGG - chr5_1:54813261-54813280 None:intergenic 30.0%
CCATCTTTGTAAGTAAAGAA+GGG + chr5_1:54813259-54813278 Msa0737560:intron 30.0%
TGAAATTTGAGTGTATTGTC+TGG + chr5_1:54813300-54813319 Msa0737560:intron 30.0%
AGGATAATATTGATGTCATG+AGG + chr5_1:54813386-54813405 Msa0737560:intron 30.0%
! TTTTGATCTTCGATTTTCAC+GGG - chr5_1:54813764-54813783 None:intergenic 30.0%
!! GTTTTGATCTTCGATTTTCA+CGG - chr5_1:54813765-54813784 None:intergenic 30.0%
TGAAAATCGAAGATCAAAAC+CGG + chr5_1:54813765-54813784 Msa0737560:CDS 30.0%
! ATCTCTATCTGAAACAGAAT+TGG - chr5_1:54813811-54813830 None:intergenic 30.0%
CAAATCATCTGTACATCATT+CGG - chr5_1:54813848-54813867 None:intergenic 30.0%
AGAGTGAGAAAAGAAAACAA+GGG - chr5_1:54813888-54813907 None:intergenic 30.0%
AAGAGTGAGAAAAGAAAACA+AGG - chr5_1:54813889-54813908 None:intergenic 30.0%
! TTTCTTTTACGACACAATAG+AGG + chr5_1:54813907-54813926 Msa0737560:intron 30.0%
! TTCTTTTACGACACAATAGA+GGG + chr5_1:54813908-54813927 Msa0737560:intron 30.0%
CCAAAACTTTCACTTCTAAA+AGG - chr5_1:54814122-54814141 None:intergenic 30.0%
!! CCTTTTAGAAGTGAAAGTTT+TGG + chr5_1:54814119-54814138 Msa0737560:intron 30.0%
ATGATCTGATCCTTTCATTA+TGG + chr5_1:54814296-54814315 Msa0737560:intron 30.0%
GTTGCTAGAACTGTTATATT+TGG + chr5_1:54814399-54814418 Msa0737560:CDS 30.0%
TATCCCATATGATCAAATGT+TGG + chr5_1:54814861-54814880 Msa0737560:intron 30.0%
ATCCCATATGATCAAATGTT+GGG + chr5_1:54814862-54814881 Msa0737560:intron 30.0%
TACCCAACATTTGATCATAT+GGG - chr5_1:54814867-54814886 None:intergenic 30.0%
ATACCCAACATTTGATCATA+TGG - chr5_1:54814868-54814887 None:intergenic 30.0%
TAACTGGAAAACTATCTCAT+CGG - chr5_1:54814931-54814950 None:intergenic 30.0%
TTATACTGCTTAGGATAGTA+AGG + chr5_1:54815000-54815019 Msa0737560:intron 30.0%
! GTAATTATGGTATTTTTCCC+AGG + chr5_1:54815022-54815041 Msa0737560:intron 30.0%
TTGCATAAAAAAGAGATAGG+AGG + chr5_1:54815127-54815146 Msa0737560:CDS 30.0%
TGCATAAAAAAGAGATAGGA+GGG + chr5_1:54815128-54815147 Msa0737560:CDS 30.0%
AAAAATAGGGAGTTACATCA+TGG + chr5_1:54815477-54815496 Msa0737560:intron 30.0%
AAAATAGGGAGTTACATCAT+GGG + chr5_1:54815478-54815497 Msa0737560:intron 30.0%
! GTTGATAGAAATGTTGAACA+GGG - chr5_1:54815649-54815668 None:intergenic 30.0%
!! AGTTGATAGAAATGTTGAAC+AGG - chr5_1:54815650-54815669 None:intergenic 30.0%
AGTCAAGTAGTTAGAAAACA+AGG - chr5_1:54815960-54815979 None:intergenic 30.0%
ACTTGACTAAATATGGATAC+AGG + chr5_1:54815972-54815991 Msa0737560:intron 30.0%
AGGCCAAAGAAAATGAAATA+AGG + chr5_1:54815992-54816011 Msa0737560:intron 30.0%
GGCCAAAGAAAATGAAATAA+GGG + chr5_1:54815993-54816012 Msa0737560:intron 30.0%
!! GTCCCTTATTTCATTTTCTT+TGG - chr5_1:54815998-54816017 None:intergenic 30.0%
CTTTATATCGGGAAAAGAAA+AGG - chr5_1:54816089-54816108 None:intergenic 30.0%
! AGTATCGAAACGCTTTATAT+CGG - chr5_1:54816101-54816120 None:intergenic 30.0%
!! AAATGATTTTGACACTTGTG+AGG - chr5_1:54816637-54816656 None:intergenic 30.0%
! CACAAGTGTCAAAATCATTT+TGG + chr5_1:54816637-54816656 Msa0737560:intron 30.0%
ACTCTACTTATCACTTTAAC+CGG + chr5_1:54816877-54816896 Msa0737560:intron 30.0%
! ACTGTTATCATTTTCCTGTT+CGG + chr5_1:54816936-54816955 Msa0737560:intron 30.0%
GAAAAAGAAATCGGAAAGAA+AGG - chr5_1:54816964-54816983 None:intergenic 30.0%
AAAGAGGGTGAAAAAGAAAT+CGG - chr5_1:54816973-54816992 None:intergenic 30.0%
AAAACAACTTGAATGTTCAG+AGG - chr5_1:54817026-54817045 None:intergenic 30.0%
! TGATGCTATTTATGCTTTGT+AGG - chr5_1:54817144-54817163 None:intergenic 30.0%
ACAAGATTGAGAGAACAATT+GGG - chr5_1:54817176-54817195 None:intergenic 30.0%
CAATTAGATTAGAGAATCCA+GGG - chr5_1:54817327-54817346 None:intergenic 30.0%
CTGGATTCTCTAATCTAATT+GGG + chr5_1:54817326-54817345 Msa0737560:intron 30.0%
! GGTAAAGTATTAAAAAGAGG+AGG + chr5_1:54817505-54817524 Msa0737560:intron 30.0%
!! TGTTAAAAGAGAGTGTTAGA+GGG + chr5_1:54817555-54817574 Msa0737560:intron 30.0%
!!! TCCTGATTTTTTAGCTATAG+TGG - chr5_1:54817934-54817953 None:intergenic 30.0%
TACTATTTATAGGTCTGCTT+TGG - chr5_1:54818022-54818041 None:intergenic 30.0%
TTGTTGTCAATTCGAAAATG+CGG - chr5_1:54818285-54818304 None:intergenic 30.0%
!! GATTTCTTTAGGACAACAAA+AGG + chr5_1:54818736-54818755 Msa0737560:intron 30.0%
!! TAGTGATATTGATAGTGTTG+TGG + chr5_1:54818835-54818854 Msa0737560:CDS 30.0%
! TTTTCAAAATCATCGTCAGA+AGG - chr5_1:54818872-54818891 None:intergenic 30.0%
!! TTCTGACGATGATTTTGAAA+AGG + chr5_1:54818871-54818890 Msa0737560:CDS 30.0%
AAAGAACAAGCCAAAATCAA+AGG + chr5_1:54818985-54819004 Msa0737560:CDS 30.0%
! AGAAATATCTGAAACCTTGT+CGG - chr5_1:54819050-54819069 None:intergenic 30.0%
ATCTAATTCAAAGGGAAGAT+TGG - chr5_1:54819128-54819147 None:intergenic 30.0%
TCTTCGGTATCTAATTCAAA+GGG - chr5_1:54819136-54819155 None:intergenic 30.0%
TTCTTCGGTATCTAATTCAA+AGG - chr5_1:54819137-54819156 None:intergenic 30.0%
!! ATATTGTTCTAGGACATACT+TGG - chr5_1:54819224-54819243 None:intergenic 30.0%
!! AGAGCCTTTAAAACCTTTAA+TGG - chr5_1:54819414-54819433 None:intergenic 30.0%
!!! ATTAAAGGTTTTAAAGGCTC+TGG + chr5_1:54819413-54819432 Msa0737560:CDS 30.0%
! CGCAAAAAGTGAGTATTTTA+TGG + chr5_1:54819671-54819690 Msa0737560:intron 30.0%
TGTATTTGATCTTCCATACT+TGG + chr5_1:54819784-54819803 Msa0737560:intron 30.0%
GTATTTGATCTTCCATACTT+GGG + chr5_1:54819785-54819804 Msa0737560:intron 30.0%
!! TAAAGATTTTGAAAGATGGC+AGG + chr5_1:54820169-54820188 Msa0737560:CDS 30.0%
AGAGTTCTTAACAATAATCC+TGG + chr5_1:54820279-54820298 Msa0737560:CDS 30.0%
GTATATTCACAATGGAGAAA+TGG - chr5_1:54820321-54820340 None:intergenic 30.0%
CAAAGCTAGTATATTCACAA+TGG - chr5_1:54820329-54820348 None:intergenic 30.0%
! GCTTTGTTAAAATTGTCAAC+TGG + chr5_1:54820343-54820362 Msa0737560:intron 30.0%
!! TTTGGAAGCGTTCAATTTAT+GGG - chr5_1:54820370-54820389 None:intergenic 30.0%
!!! TTTTGGAAGCGTTCAATTTA+TGG - chr5_1:54820371-54820390 None:intergenic 30.0%
TTCTTTCGATGATATCACTT+CGG - chr5_1:54820841-54820860 None:intergenic 30.0%
ATAGTTCCATTGAAAGTAGT+AGG + chr5_1:54820943-54820962 Msa0737560:CDS 30.0%
! GATTTTCCTACTACTTTCAA+TGG - chr5_1:54820952-54820971 None:intergenic 30.0%
ACTGAATCTTTGTTCTTCTT+TGG - chr5_1:54821059-54821078 None:intergenic 30.0%
AAGAAGAACAAAGATTCAGT+AGG + chr5_1:54821059-54821078 Msa0737560:CDS 30.0%
AGAAGAACAAAGATTCAGTA+GGG + chr5_1:54821060-54821079 Msa0737560:CDS 30.0%
AATCTAAACAGCTTAGGAAA+TGG + chr5_1:54821177-54821196 Msa0737560:CDS 30.0%
AATGGTTCCAATCATAAAAG+TGG + chr5_1:54821195-54821214 Msa0737560:exon 30.0%
!! CTCTAAACCACTTTTATGAT+TGG - chr5_1:54821205-54821224 None:intergenic 30.0%
CAATCATAAAAGTGGTTTAG+AGG + chr5_1:54821203-54821222 Msa0737560:exon 30.0%
ATCATAAAAGTGGTTTAGAG+GGG + chr5_1:54821205-54821224 Msa0737560:exon 30.0%
AAAGCTTCAAGATTAAGTCA+AGG + chr5_1:54821287-54821306 Msa0737560:intron 30.0%
TTTGGTTGTAGTAGTAACCA+GGG + chr5_1:54812161-54812180 Msa0737560:five_prime_UTR 35.0%
GAAACAGAATTGAAAAACCC+TGG - chr5_1:54812181-54812200 None:intergenic 35.0%
! CGTTTTCATCTCTTCATCAT+CGG + chr5_1:54812234-54812253 Msa0737560:five_prime_UTR 35.0%
TGAGAGTTAGTGAAGGAATA+GGG - chr5_1:54812346-54812365 None:intergenic 35.0%
AAATACCTGAGAGTTAGTGA+AGG - chr5_1:54812353-54812372 None:intergenic 35.0%
GAACAAACTTTCAGTGAAGT+TGG + chr5_1:54812458-54812477 Msa0737560:CDS 35.0%
GATTAAACACTCCTTGGATT+AGG - chr5_1:54813046-54813065 None:intergenic 35.0%
ATTAGGGATTAAACACTCCT+TGG - chr5_1:54813052-54813071 None:intergenic 35.0%
! TACTTACAAAGATGGGTTTC+TGG - chr5_1:54813254-54813273 None:intergenic 35.0%
CCCATCTTTGTAAGTAAAGA+AGG + chr5_1:54813258-54813277 Msa0737560:intron 35.0%
CCCTTCTTTACTTACAAAGA+TGG - chr5_1:54813262-54813281 None:intergenic 35.0%
!!! AAAGAAGGGTTTGCCATTTT+TGG + chr5_1:54813273-54813292 Msa0737560:intron 35.0%
GTTCACAAAGCTTACTTAAG+AGG + chr5_1:54813366-54813385 Msa0737560:intron 35.0%
! TTTGATCTTCGATTTTCACG+GGG - chr5_1:54813763-54813782 None:intergenic 35.0%
TTCAGTTCCAAAAGAACCAA+AGG + chr5_1:54814003-54814022 Msa0737560:CDS 35.0%
TGGATAAACCGAAAAACTCA+AGG + chr5_1:54814139-54814158 Msa0737560:CDS 35.0%
!!! AGCTGCTTTTTTTATTTCCG+CGG - chr5_1:54814169-54814188 None:intergenic 35.0%
! CTGAAGTACTACTAAGAAAG+GGG - chr5_1:54814253-54814272 None:intergenic 35.0%
! GCTGAAGTACTACTAAGAAA+GGG - chr5_1:54814254-54814273 None:intergenic 35.0%
TTGTCTTGTGAATTCTGCTA+TGG + chr5_1:54814422-54814441 Msa0737560:CDS 35.0%
AGAAGATCATTCCTTGAAAG+GGG - chr5_1:54814504-54814523 None:intergenic 35.0%
CAGAAGATCATTCCTTGAAA+GGG - chr5_1:54814505-54814524 None:intergenic 35.0%
AAATGTTGGGTATGCTGATA+AGG + chr5_1:54814875-54814894 Msa0737560:intron 35.0%
! GATGAGATAGTTTTCCAGTT+AGG + chr5_1:54814930-54814949 Msa0737560:intron 35.0%
!! TTCTTGATTTGCATCCTAAC+TGG - chr5_1:54814947-54814966 None:intergenic 35.0%
GCATAAAAAAGAGATAGGAG+GGG + chr5_1:54815129-54815148 Msa0737560:CDS 35.0%
CATAAAAAAGAGATAGGAGG+GGG + chr5_1:54815130-54815149 Msa0737560:CDS 35.0%
TACTGCTGATCACGAAAATA+TGG + chr5_1:54815432-54815451 Msa0737560:intron 35.0%
CCAAAAAGAAAACCCTTTCA+AGG - chr5_1:54815531-54815550 None:intergenic 35.0%
! CCTTGAAAGGGTTTTCTTTT+TGG + chr5_1:54815528-54815547 Msa0737560:intron 35.0%
ACATATCAGCATCAGATACA+AGG - chr5_1:54815588-54815607 None:intergenic 35.0%
AAGGAATATATACCCTGTGT+CGG - chr5_1:54816070-54816089 None:intergenic 35.0%
GTATCGAAACGCTTTATATC+GGG - chr5_1:54816100-54816119 None:intergenic 35.0%
AAACTCAATGGATCGAAGTT+TGG + chr5_1:54816328-54816347 Msa0737560:CDS 35.0%
AACTCAATGGATCGAAGTTT+GGG + chr5_1:54816329-54816348 Msa0737560:CDS 35.0%
! CTGAAGTATGATAATGTCAC+AGG - chr5_1:54816542-54816561 None:intergenic 35.0%
AGACCCAGAATTTCATCAAT+AGG - chr5_1:54816708-54816727 None:intergenic 35.0%
GGTTAAAGTGATAAGTAGAG+TGG - chr5_1:54816878-54816897 None:intergenic 35.0%
TTATGCTTTGTAGGATAAGG+AGG - chr5_1:54817135-54817154 None:intergenic 35.0%
CACAAGATTGAGAGAACAAT+TGG - chr5_1:54817177-54817196 None:intergenic 35.0%
ATTGTTCTCTCAATCTTGTG+TGG + chr5_1:54817177-54817196 Msa0737560:intron 35.0%
CCAATTAGATTAGAGAATCC+AGG - chr5_1:54817328-54817347 None:intergenic 35.0%
CCTGGATTCTCTAATCTAAT+TGG + chr5_1:54817325-54817344 Msa0737560:intron 35.0%
TTGAGTTTCAATTTGGCTGT+TGG + chr5_1:54817367-54817386 Msa0737560:intron 35.0%
ATACTTTACCTGATGACTGA+TGG - chr5_1:54817495-54817514 None:intergenic 35.0%
!! GTGTTAAAAGAGAGTGTTAG+AGG + chr5_1:54817554-54817573 Msa0737560:intron 35.0%
GGCACAATACATCATGAAAT+AGG + chr5_1:54817734-54817753 Msa0737560:intron 35.0%
!!! GATTTTTTAGCTATAGTGGC+TGG - chr5_1:54817930-54817949 None:intergenic 35.0%
GCCACTATAGCTAAAAAATC+AGG + chr5_1:54817930-54817949 Msa0737560:intron 35.0%
AGGGATAGCAAAATCGAAAA+TGG - chr5_1:54818084-54818103 None:intergenic 35.0%
GCCTACAAAATGTTCTATGA+AGG + chr5_1:54818311-54818330 Msa0737560:intron 35.0%
! GCCTTCATAGAACATTTTGT+AGG - chr5_1:54818315-54818334 None:intergenic 35.0%
TCTTACTGTTGAATGTGCAT+TGG - chr5_1:54818387-54818406 None:intergenic 35.0%
CAGTATGTATACATGTTCCT+GGG + chr5_1:54818486-54818505 Msa0737560:intron 35.0%
GCACATATTGTTCTAGTGTT+GGG - chr5_1:54818561-54818580 None:intergenic 35.0%
AGCACATATTGTTCTAGTGT+TGG - chr5_1:54818562-54818581 None:intergenic 35.0%
AGATAGTAGTACTACTACTG+AGG + chr5_1:54818769-54818788 Msa0737560:CDS 35.0%
ACTGACAAAGAATCTGATCA+AGG + chr5_1:54818806-54818825 Msa0737560:CDS 35.0%
CTGACAAAGAATCTGATCAA+GGG + chr5_1:54818807-54818826 Msa0737560:CDS 35.0%
TGACAAAGAATCTGATCAAG+GGG + chr5_1:54818808-54818827 Msa0737560:CDS 35.0%
!! TGATATTGATAGTGTTGTGG+AGG + chr5_1:54818838-54818857 Msa0737560:CDS 35.0%
CAAATCATCTTCTGTTTCCT+TGG - chr5_1:54819086-54819105 None:intergenic 35.0%
AAATCGTTGCTTCACTTCTT+CGG - chr5_1:54819152-54819171 None:intergenic 35.0%
! AAGCAACGATTTTCTGCATT+TGG + chr5_1:54819160-54819179 Msa0737560:CDS 35.0%
TATGGTAGCTGATATGCAAT+AGG + chr5_1:54819550-54819569 Msa0737560:intron 35.0%
!! TTTGCGTTTTGACATATCAG+TGG - chr5_1:54819657-54819676 None:intergenic 35.0%
ATAACTTTACCACCCAAGTA+TGG - chr5_1:54819800-54819819 None:intergenic 35.0%
AGATCACTACAATCAGTTAC+AGG - chr5_1:54819847-54819866 None:intergenic 35.0%
!! ATTTTGAAAGATGGCAGGAA+AGG + chr5_1:54820174-54820193 Msa0737560:CDS 35.0%
!! TTGGAAGCGTTCAATTTATG+GGG - chr5_1:54820369-54820388 None:intergenic 35.0%
CCTTGTTCGCTATTTGAATT+TGG - chr5_1:54820741-54820760 None:intergenic 35.0%
CCAAATTCAAATAGCGAACA+AGG + chr5_1:54820738-54820757 Msa0737560:CDS 35.0%
AATTCAAATAGCGAACAAGG+TGG + chr5_1:54820741-54820760 Msa0737560:CDS 35.0%
ACTTCGGAATTTGTACTCTT+GGG - chr5_1:54820825-54820844 None:intergenic 35.0%
AAGCTGAAAAGTAACCAAGA+TGG + chr5_1:54820885-54820904 Msa0737560:CDS 35.0%
! CATGGTGCTAAATTACATGA+AGG + chr5_1:54820915-54820934 Msa0737560:CDS 35.0%
GAAAGTAGTAGGAAAATCTC+AGG + chr5_1:54820954-54820973 Msa0737560:CDS 35.0%
AAGAAAGAAGACGCGATATT+TGG + chr5_1:54820978-54820997 Msa0737560:CDS 35.0%
AACCAAAGACAATATGGACC+GGG - chr5_1:54812148-54812167 None:intergenic 40.0%
CAACCAAAGACAATATGGAC+CGG - chr5_1:54812149-54812168 None:intergenic 40.0%
CTTTGGTTGTAGTAGTAACC+AGG + chr5_1:54812160-54812179 Msa0737560:five_prime_UTR 40.0%
GCAATGAAGGAAAATAGCGA+CGG + chr5_1:54812277-54812296 Msa0737560:CDS 40.0%
CTGAGAGTTAGTGAAGGAAT+AGG - chr5_1:54812347-54812366 None:intergenic 40.0%
CTATTCCTTCACTAACTCTC+AGG + chr5_1:54812345-54812364 Msa0737560:CDS 40.0%
! ACCTGTTAGACGTTGTTTCA+TGG + chr5_1:54812481-54812500 Msa0737560:CDS 40.0%
ACCATGAAACAACGTCTAAC+AGG - chr5_1:54812485-54812504 None:intergenic 40.0%
GAAATTCTGCTACGCTATAG+CGG - chr5_1:54812749-54812768 None:intergenic 40.0%
ATACCGTCTAGTAACAGCTA+TGG + chr5_1:54812810-54812829 Msa0737560:intron 40.0%
TTGCCATAGCTGTTACTAGA+CGG - chr5_1:54812816-54812835 None:intergenic 40.0%
! TAGTTTTCCGCTGTTGTACA+AGG + chr5_1:54812841-54812860 Msa0737560:intron 40.0%
! AGTTTTCCGCTGTTGTACAA+GGG + chr5_1:54812842-54812861 Msa0737560:intron 40.0%
TTAAGACCCTTGTACAACAG+CGG - chr5_1:54812851-54812870 None:intergenic 40.0%
TCAAAAACTGTATCCCTCCT+CGG - chr5_1:54813413-54813432 None:intergenic 40.0%
TTGCTTCACTAGTATCAGGT+TGG + chr5_1:54813466-54813485 Msa0737560:intron 40.0%
! CGTGCTTCACTACAATTTTC+CGG - chr5_1:54813726-54813745 None:intergenic 40.0%
AGCATCAATCAACCTTGATC+CGG - chr5_1:54813787-54813806 None:intergenic 40.0%
GTGAGAAAAGAAAACAAGGG+AGG - chr5_1:54813885-54813904 None:intergenic 40.0%
!! GATAAAGACAGCGGATTATC+TGG + chr5_1:54813965-54813984 Msa0737560:CDS 40.0%
!!! GGTTCTTTTGGAACTGAAAC+AGG - chr5_1:54814001-54814020 None:intergenic 40.0%
!!! CCTTCTTCCTTTGGTTCTTT+TGG - chr5_1:54814013-54814032 None:intergenic 40.0%
CCAAAAGAACCAAAGGAAGA+AGG + chr5_1:54814010-54814029 Msa0737560:CDS 40.0%
CAATCACAACCTTCTTCCTT+TGG - chr5_1:54814022-54814041 None:intergenic 40.0%
!!! GCTGCTTTTTTTATTTCCGC+GGG - chr5_1:54814168-54814187 None:intergenic 40.0%
! GGCTGAAGTACTACTAAGAA+AGG - chr5_1:54814255-54814274 None:intergenic 40.0%
CTATTAAGCATCCCCTTTCA+AGG + chr5_1:54814490-54814509 Msa0737560:CDS 40.0%
GCAGAAGATCATTCCTTGAA+AGG - chr5_1:54814506-54814525 None:intergenic 40.0%
AAGCTTCCATTTCTGAGTCT+TGG - chr5_1:54815865-54815884 None:intergenic 40.0%
TGTCAGAAACCTTCCTTTCA+AGG + chr5_1:54815887-54815906 Msa0737560:CDS 40.0%
TCAACAGATCGAACCTTGAA+AGG - chr5_1:54815903-54815922 None:intergenic 40.0%
! ATTTTCAGCATCTTGCTTGC+AGG - chr5_1:54816215-54816234 None:intergenic 40.0%
! TCGTCTCATAGCTGTTGATT+GGG + chr5_1:54816354-54816373 Msa0737560:CDS 40.0%
!! AAATTACCTTCCTCTGAAGC+AGG - chr5_1:54816421-54816440 None:intergenic 40.0%
AAGTAGAGTGGATGATGTGT+TGG - chr5_1:54816866-54816885 None:intergenic 40.0%
CAACTTATTCAACAGGTTGC+CGG - chr5_1:54816899-54816918 None:intergenic 40.0%
AGGCTTGCAACTTATTCAAC+AGG - chr5_1:54816906-54816925 None:intergenic 40.0%
! TTTTCACCCTCTTTCTCATC+TGG + chr5_1:54816979-54816998 Msa0737560:intron 40.0%
TGGCGGCATGAAAATGATTT+GGG + chr5_1:54817197-54817216 Msa0737560:intron 40.0%
AACTTGTACCATCAGTCATC+AGG + chr5_1:54817484-54817503 Msa0737560:intron 40.0%
AAAAGAGGAGGATGATGTGT+TGG + chr5_1:54817517-54817536 Msa0737560:intron 40.0%
GGTCAATGTTATGGTGTGAA+GGG - chr5_1:54817763-54817782 None:intergenic 40.0%
AGGTCAATGTTATGGTGTGA+AGG - chr5_1:54817764-54817783 None:intergenic 40.0%
ACATGGTGAGGTCAATGTTA+TGG - chr5_1:54817772-54817791 None:intergenic 40.0%
TAACATTGACCTCACCATGT+CGG + chr5_1:54817772-54817791 Msa0737560:intron 40.0%
!!! ACTTTTTGGTTGTTCCGACA+TGG - chr5_1:54817789-54817808 None:intergenic 40.0%
GGTGTCTGATAAGTATCCTA+TGG + chr5_1:54817823-54817842 Msa0737560:intron 40.0%
CTTCAGAAATGGACAACCAT+AGG - chr5_1:54817842-54817861 None:intergenic 40.0%
!! GGTTGTCCATTTCTGAAGTA+TGG + chr5_1:54817844-54817863 Msa0737560:intron 40.0%
TAGCCTCTGTTTGTCAATAG+CGG + chr5_1:54817899-54817918 Msa0737560:intron 40.0%
GCAGTATGTATACATGTTCC+TGG + chr5_1:54818485-54818504 Msa0737560:intron 40.0%
CCACATATTGTTCTGATGTC+TGG - chr5_1:54818651-54818670 None:intergenic 40.0%
CCAGACATCAGAACAATATG+TGG + chr5_1:54818648-54818667 Msa0737560:intron 40.0%
TACAGATTCATCTTTGGCAG+AGG - chr5_1:54818939-54818958 None:intergenic 40.0%
! GTTCTTTTCTTCAGACGACA+CGG - chr5_1:54818972-54818991 None:intergenic 40.0%
AACATCTAAAGAGTCCGACA+AGG + chr5_1:54819033-54819052 Msa0737560:CDS 40.0%
TTCTAAGCCTGAAACTTCCA+AGG + chr5_1:54819066-54819085 Msa0737560:CDS 40.0%
TCTGTTTCCTTGGAAGTTTC+AGG - chr5_1:54819076-54819095 None:intergenic 40.0%
ACTCCTCTATTACTCAATGC+AGG + chr5_1:54819280-54819299 Msa0737560:intron 40.0%
!!! TGGGATGGGTATTTTGGTAA+AGG + chr5_1:54819383-54819402 Msa0737560:CDS 40.0%
!!! GGGATGGGTATTTTGGTAAA+GGG + chr5_1:54819384-54819403 Msa0737560:CDS 40.0%
GGTAAAGGGTAGACCATTAA+AGG + chr5_1:54819398-54819417 Msa0737560:CDS 40.0%
!! AAAGGCTCTGGACAAGAAAT+CGG + chr5_1:54819425-54819444 Msa0737560:CDS 40.0%
TAGGAGGGACTTATTCTTGA+CGG + chr5_1:54819605-54819624 Msa0737560:intron 40.0%
TTTGATCTTCCATACTTGGG+TGG + chr5_1:54819788-54819807 Msa0737560:intron 40.0%
CCAAGCAAACACCTGTAATT+CGG + chr5_1:54820038-54820057 Msa0737560:CDS 40.0%
!! ATTCGGCAGGTTGGTTAAAT+AGG + chr5_1:54820055-54820074 Msa0737560:intron 40.0%
ATTCAAGAAAAGCGACTCCA+CGG - chr5_1:54820227-54820246 None:intergenic 40.0%
AAGAACTCTCAACGCAACAA+GGG - chr5_1:54820268-54820287 None:intergenic 40.0%
TAAGAACTCTCAACGCAACA+AGG - chr5_1:54820269-54820288 None:intergenic 40.0%
! GGGTGTAATTGTTTGTTACC+AGG - chr5_1:54820300-54820319 None:intergenic 40.0%
TCATTGACCACAGAAACCTT+CGG + chr5_1:54820504-54820523 Msa0737560:intron 40.0%
TCAAGAGCAAACTCCACAAT+GGG - chr5_1:54820543-54820562 None:intergenic 40.0%
ATCAAGAGCAAACTCCACAA+TGG - chr5_1:54820544-54820563 None:intergenic 40.0%
CGTTACGAAGTTTCAGTTTC+TGG - chr5_1:54820572-54820591 None:intergenic 40.0%
AATGATAAACCCGACAATCC+AGG + chr5_1:54820645-54820664 Msa0737560:CDS 40.0%
TGACAAACCAGCAAAAGACT+TGG + chr5_1:54820713-54820732 Msa0737560:CDS 40.0%
! TTTGGTACCAAGTCTTTTGC+TGG - chr5_1:54820723-54820742 None:intergenic 40.0%
! CCTTGAGGAGATTTTCCATT+TGG - chr5_1:54820774-54820793 None:intergenic 40.0%
CCAAATGGAAAATCTCCTCA+AGG + chr5_1:54820771-54820790 Msa0737560:CDS 40.0%
AATGGAAAATCTCCTCAAGG+AGG + chr5_1:54820774-54820793 Msa0737560:CDS 40.0%
CTTCGGAATTTGTACTCTTG+GGG - chr5_1:54820824-54820843 None:intergenic 40.0%
CACTTCGGAATTTGTACTCT+TGG - chr5_1:54820826-54820845 None:intergenic 40.0%
!! AGAAAGTCCAAAAGCGTCTT+CGG + chr5_1:54820857-54820876 Msa0737560:CDS 40.0%
GTAATTTAGCACCATGACTC+TGG - chr5_1:54820911-54820930 None:intergenic 40.0%
AAGACGCGATATTTGGAAAG+AGG + chr5_1:54820985-54821004 Msa0737560:CDS 40.0%
ATGCAAAACCAAGAACAAGC+AGG + chr5_1:54821011-54821030 Msa0737560:CDS 40.0%
TGCAAAACCAAGAACAAGCA+GGG + chr5_1:54821012-54821031 Msa0737560:CDS 40.0%
! GGGAAAAGGTTTCTAGGAAA+AGG + chr5_1:54821033-54821052 Msa0737560:CDS 40.0%
GAACAAAGATTCAGTAGGGA+AGG + chr5_1:54821064-54821083 Msa0737560:CDS 40.0%
TAGATCCAAGTTCTCACACA+AGG + chr5_1:54821124-54821143 Msa0737560:CDS 40.0%
AGATCCAAGTTCTCACACAA+GGG + chr5_1:54821125-54821144 Msa0737560:CDS 40.0%
AAGGGTTCTCAAGGAAATGA+TGG + chr5_1:54821143-54821162 Msa0737560:CDS 40.0%
AAAAGTGGTTTAGAGGGGTT+TGG + chr5_1:54821210-54821229 Msa0737560:exon 40.0%
ATCTCTTCATCATCGGCGAT+GGG + chr5_1:54812241-54812260 Msa0737560:exon 45.0%
! TCTACGCAACATCGTGGTTT+TGG + chr5_1:54812631-54812650 Msa0737560:CDS 45.0%
! TATAGGTGTTGTGTTGGCGT+CGG + chr5_1:54812990-54813009 Msa0737560:intron 45.0%
TATTGATGTCATGAGGACCG+AGG + chr5_1:54813393-54813412 Msa0737560:intron 45.0%
GTGCTTGCTTCACTAGTATC+AGG + chr5_1:54813462-54813481 Msa0737560:intron 45.0%
CAAGCCATTGAGCTGAAGAA+CGG + chr5_1:54813685-54813704 Msa0737560:CDS 45.0%
TGAACCGTTCTTCAGCTCAA+TGG - chr5_1:54813692-54813711 None:intergenic 45.0%
TGAGCTGAAGAACGGTTCAT+TGG + chr5_1:54813693-54813712 Msa0737560:CDS 45.0%
CTGAAGAACGGTTCATTGGT+TGG + chr5_1:54813697-54813716 Msa0737560:CDS 45.0%
CGAAGATCAAAACCGGATCA+AGG + chr5_1:54813772-54813791 Msa0737560:CDS 45.0%
GACACAATAGAGGGCAATGA+AGG + chr5_1:54813917-54813936 Msa0737560:intron 45.0%
TTGTAATGACGCAGCAGATG+AGG + chr5_1:54814191-54814210 Msa0737560:CDS 45.0%
TGTAATGACGCAGCAGATGA+GGG + chr5_1:54814192-54814211 Msa0737560:CDS 45.0%
AGGAATGATCTTCTGCAGCA+TGG + chr5_1:54814510-54814529 Msa0737560:CDS 45.0%
GCACTTCGTGTTGAATCTCA+TGG + chr5_1:54814697-54814716 Msa0737560:intron 45.0%
CTTGTCATAGAACGCATCAG+AGG + chr5_1:54815192-54815211 Msa0737560:intron 45.0%
! ATGCGTCTAGAGCCTTGAAA+GGG + chr5_1:54815516-54815535 Msa0737560:intron 45.0%
!! TTTGTTGTTGTATGTGGGCC+AGG + chr5_1:54815836-54815855 Msa0737560:intron 45.0%
! TTGTTGTTGTATGTGGGCCA+GGG + chr5_1:54815837-54815856 Msa0737560:intron 45.0%
CAGATCGAACCTTGAAAGGA+AGG - chr5_1:54815899-54815918 None:intergenic 45.0%
GGAATGAATACCTCCCATAC+AGG - chr5_1:54816039-54816058 None:intergenic 45.0%
AAGACTGCACACAGGAAATG+AGG - chr5_1:54816164-54816183 None:intergenic 45.0%
!! AAGTTCCCTGTTGCTGTTTC+AGG + chr5_1:54816297-54816316 Msa0737560:intron 45.0%
AATCGCCTGAAACAGCAACA+GGG - chr5_1:54816305-54816324 None:intergenic 45.0%
CAGGCGATTCGAAAACTCAA+TGG + chr5_1:54816316-54816335 Msa0737560:intron 45.0%
GTCGTCTCATAGCTGTTGAT+TGG + chr5_1:54816353-54816372 Msa0737560:CDS 45.0%
CACAAGCCAGATGAGAAAGA+GGG - chr5_1:54816988-54817007 None:intergenic 45.0%
TTGAATGTTCAGAGGAAGCC+AGG - chr5_1:54817018-54817037 None:intergenic 45.0%
GTTCTCTCAATCTTGTGTGG+CGG + chr5_1:54817180-54817199 Msa0737560:intron 45.0%
GTGGCGGCATGAAAATGATT+TGG + chr5_1:54817196-54817215 Msa0737560:intron 45.0%
GTGACACTAGGGTTGGAATT+CGG - chr5_1:54817292-54817311 None:intergenic 45.0%
CAGATCGGAAAGTGACACTA+GGG - chr5_1:54817303-54817322 None:intergenic 45.0%
ACAGATCGGAAAGTGACACT+AGG - chr5_1:54817304-54817323 None:intergenic 45.0%
TAGAGAATCCAGGGACAGAT+CGG - chr5_1:54817318-54817337 None:intergenic 45.0%
!! TGGTGTTATCACCCAACCAA+AGG + chr5_1:54817387-54817406 Msa0737560:intron 45.0%
TTATCACCCAACCAAAGGTC+AGG + chr5_1:54817392-54817411 Msa0737560:intron 45.0%
TATCACCCAACCAAAGGTCA+GGG + chr5_1:54817393-54817412 Msa0737560:intron 45.0%
GCGAGTCCATACTTCAGAAA+TGG - chr5_1:54817853-54817872 None:intergenic 45.0%
CAAACAGAGGCTATGATGCA+TGG - chr5_1:54817892-54817911 None:intergenic 45.0%
!! GTGTATAGTGGGCGCTATTT+GGG - chr5_1:54818219-54818238 None:intergenic 45.0%
ACCAGTGTCTTATACCCATC+CGG - chr5_1:54818354-54818373 None:intergenic 45.0%
CTAGGACATACTTGGTCACT+TGG - chr5_1:54819216-54819235 None:intergenic 45.0%
ACGCCTGCATTGAGTAATAG+AGG - chr5_1:54819286-54819305 None:intergenic 45.0%
TTAAGAAAACCAGTCCCTCG+TGG - chr5_1:54819309-54819328 None:intergenic 45.0%
TCAACTGCCAATACTGCTTC+TGG + chr5_1:54819363-54819382 Msa0737560:CDS 45.0%
CAACTGCCAATACTGCTTCT+GGG + chr5_1:54819364-54819383 Msa0737560:CDS 45.0%
!!! TGCTTCTGGGATGGGTATTT+TGG + chr5_1:54819377-54819396 Msa0737560:CDS 45.0%
! CAAGAAATCGGCTCATGACA+AGG + chr5_1:54819437-54819456 Msa0737560:CDS 45.0%
AGACCACCGCAATCTTTACT+TGG + chr5_1:54819488-54819507 Msa0737560:CDS 45.0%
CCTTCGCCAAGTAAAGATTG+CGG - chr5_1:54819497-54819516 None:intergenic 45.0%
CCGAATTACAGGTGTTTGCT+TGG - chr5_1:54820041-54820060 None:intergenic 45.0%
TAACCAACCTGCCGAATTAC+AGG - chr5_1:54820052-54820071 None:intergenic 45.0%
GAAAGATGGCAGGAAAGGAA+AGG + chr5_1:54820179-54820198 Msa0737560:CDS 45.0%
TTCAAGAAAAGCGACTCCAC+GGG - chr5_1:54820226-54820245 None:intergenic 45.0%
AAACCTTCGGTCCTGAACAT+CGG + chr5_1:54820517-54820536 Msa0737560:CDS 45.0%
AAAGCTACAGTATCAGCAGC+TGG + chr5_1:54820593-54820612 Msa0737560:CDS 45.0%
TTTCTGTTGTTGCCGTTGTG+AGG - chr5_1:54820621-54820640 None:intergenic 45.0%
AGCGTAAACTCCTGGATTGT+CGG - chr5_1:54820658-54820677 None:intergenic 45.0%
AATCCAGGAGTTTACGCTCA+TGG + chr5_1:54820660-54820679 Msa0737560:CDS 45.0%
! CAAGGTGGTAAAGTGCCAAA+TGG + chr5_1:54820756-54820775 Msa0737560:CDS 45.0%
! CTTTTGGATTTGCCTCCTTG+AGG - chr5_1:54820789-54820808 None:intergenic 45.0%
! GGGGTTCTCTTTCTGTCTTT+TGG - chr5_1:54820805-54820824 None:intergenic 45.0%
GCAAAACCAAGAACAAGCAG+GGG + chr5_1:54821013-54821032 Msa0737560:CDS 45.0%
AAGCAGGGGAAAAGGTTTCT+AGG + chr5_1:54821027-54821046 Msa0737560:CDS 45.0%
AGATTCAGTAGGGAAGGACA+TGG + chr5_1:54821070-54821089 Msa0737560:CDS 45.0%
AGAACCCTTGTGTGAGAACT+TGG - chr5_1:54821132-54821151 None:intergenic 45.0%
TTCTCACACAAGGGTTCTCA+AGG + chr5_1:54821134-54821153 Msa0737560:CDS 45.0%
GTTGGCTAACCGTGTTATGT+TGG - chr5_1:54821323-54821342 None:intergenic 45.0%
!!! TGATTAATTTTTATTTTTTT+TGG - chr5_1:54820388-54820407 None:intergenic 5.0%
CAAAGACAATATGGACCGGG+TGG - chr5_1:54812145-54812164 None:intergenic 50.0%
CACCCGGTCCATATTGTCTT+TGG + chr5_1:54812143-54812162 Msa0737560:five_prime_UTR 50.0%
CATCTCTTCATCATCGGCGA+TGG + chr5_1:54812240-54812259 Msa0737560:exon 50.0%
ATCGGTGACTGTGTTGTGTC+TGG - chr5_1:54812936-54812955 None:intergenic 50.0%
GATTAGGTGTGTCCCGTTGT+CGG - chr5_1:54813030-54813049 None:intergenic 50.0%
AACGGGACACACCTAATCCA+AGG + chr5_1:54813032-54813051 Msa0737560:intron 50.0%
CATGCTCACTCTGCATGTTC+TGG + chr5_1:54813501-54813520 Msa0737560:intron 50.0%
CGTTCTTCAGCTCAATGGCT+TGG - chr5_1:54813687-54813706 None:intergenic 50.0%
!! ACGGTTCATTGGTTGGTGAC+CGG + chr5_1:54813704-54813723 Msa0737560:CDS 50.0%
! GATCTTCGATTTTCACGGGG+AGG - chr5_1:54813760-54813779 None:intergenic 50.0%
! GCGGGCTTCCTTGAGTTTTT+CGG - chr5_1:54814150-54814169 None:intergenic 50.0%
GAAAAACTCAAGGAAGCCCG+CGG + chr5_1:54814149-54814168 Msa0737560:CDS 50.0%
GTAATGACGCAGCAGATGAG+GGG + chr5_1:54814193-54814212 Msa0737560:CDS 50.0%
TAATGACGCAGCAGATGAGG+GGG + chr5_1:54814194-54814213 Msa0737560:CDS 50.0%
!! ACACACAGTGCCGATTTCTC+TGG - chr5_1:54814469-54814488 None:intergenic 50.0%
! TCGTGCTGTTCTATGTGCTC+TGG + chr5_1:54814761-54814780 Msa0737560:intron 50.0%
AAGAACAGCCTTCTTGCAGC+AGG - chr5_1:54815048-54815067 None:intergenic 50.0%
AGATAGGAGGGGGAACTGTT+TGG + chr5_1:54815140-54815159 Msa0737560:CDS 50.0%
GATAGGAGGGGGAACTGTTT+GGG + chr5_1:54815141-54815160 Msa0737560:CDS 50.0%
ACTTTACCTCCCCACCAAGT+TGG - chr5_1:54815171-54815190 None:intergenic 50.0%
! GATGCGTCTAGAGCCTTGAA+AGG + chr5_1:54815515-54815534 Msa0737560:intron 50.0%
ATTTCTGAGTCTTGGCTCCC+TGG - chr5_1:54815857-54815876 None:intergenic 50.0%
AGGGAGCCAAGACTCAGAAA+TGG + chr5_1:54815856-54815875 Msa0737560:intron 50.0%
! AAGGGACGCGTTTTCATCTG+CGG + chr5_1:54816011-54816030 Msa0737560:CDS 50.0%
ATTCCACAGAAGTCCGACAC+AGG + chr5_1:54816054-54816073 Msa0737560:CDS 50.0%
TTCCACAGAAGTCCGACACA+GGG + chr5_1:54816055-54816074 Msa0737560:CDS 50.0%
TCCTGTGTGCAGTCTTTCGA+AGG + chr5_1:54816168-54816187 Msa0737560:intron 50.0%
CCTGTGTGCAGTCTTTCGAA+GGG + chr5_1:54816169-54816188 Msa0737560:intron 50.0%
GAATCGCCTGAAACAGCAAC+AGG - chr5_1:54816306-54816325 None:intergenic 50.0%
!! CTCTGAAGCAGGAGCATCAT+TGG - chr5_1:54816410-54816429 None:intergenic 50.0%
CAATGATGCTCCTGCTTCAG+AGG + chr5_1:54816408-54816427 Msa0737560:CDS 50.0%
GCACAAGCCAGATGAGAAAG+AGG - chr5_1:54816989-54817008 None:intergenic 50.0%
! TCTGGCTTGTGCATTTAGCC+TGG + chr5_1:54816997-54817016 Msa0737560:intron 50.0%
TCGGAAAGTGACACTAGGGT+TGG - chr5_1:54817299-54817318 None:intergenic 50.0%
ATCACCCAACCAAAGGTCAG+GGG + chr5_1:54817394-54817413 Msa0737560:intron 50.0%
TTGGTTGTTCCGACATGGTG+AGG - chr5_1:54817784-54817803 None:intergenic 50.0%
TATGGACTCGCCTAAGACCA+TGG + chr5_1:54817862-54817881 Msa0737560:intron 50.0%
CTATGATGCATGGACAGCCA+TGG - chr5_1:54817882-54817901 None:intergenic 50.0%
CGACCGCTATTGACAAACAG+AGG - chr5_1:54817905-54817924 None:intergenic 50.0%
AAAATCAGGATCACCGCACC+AGG + chr5_1:54817944-54817963 Msa0737560:intron 50.0%
!! TATAGTGGGCGCTATTTGGG+TGG - chr5_1:54818216-54818235 None:intergenic 50.0%
!! GGTGTATAGTGGGCGCTATT+TGG - chr5_1:54818220-54818239 None:intergenic 50.0%
GTCAATTCGAAAATGCGGCG+CGG - chr5_1:54818280-54818299 None:intergenic 50.0%
CCAGTGTCTTATACCCATCC+GGG - chr5_1:54818353-54818372 None:intergenic 50.0%
! TTGGTCACTTGGTGGAGAAC+AGG - chr5_1:54819205-54819224 None:intergenic 50.0%
GGACATACTTGGTCACTTGG+TGG - chr5_1:54819213-54819232 None:intergenic 50.0%
TGCATTATCAGCTGCTTCCG+CGG - chr5_1:54819340-54819359 None:intergenic 50.0%
! TGCCAATACTGCTTCTGGGA+TGG + chr5_1:54819368-54819387 Msa0737560:CDS 50.0%
!! GCCAATACTGCTTCTGGGAT+GGG + chr5_1:54819369-54819388 Msa0737560:CDS 50.0%
ACCCATCCCAGAAGCAGTAT+TGG - chr5_1:54819373-54819392 None:intergenic 50.0%
TCGCCAAGTAAAGATTGCGG+TGG - chr5_1:54819494-54819513 None:intergenic 50.0%
CCGCAATCTTTACTTGGCGA+AGG + chr5_1:54819494-54819513 Msa0737560:CDS 50.0%
GCATATCAGCTACCATAGCC+TGG - chr5_1:54819547-54819566 None:intergenic 50.0%
ATCAGTGGCTGAAACCCCTT+CGG - chr5_1:54819642-54819661 None:intergenic 50.0%
GCAAACACCTGTAATTCGGC+AGG + chr5_1:54820042-54820061 Msa0737560:CDS 50.0%
ACACCTGTAATTCGGCAGGT+TGG + chr5_1:54820046-54820065 Msa0737560:intron 50.0%
CAAGAACAGCAGTATTCCCG+TGG + chr5_1:54820207-54820226 Msa0737560:CDS 50.0%
TTCAGGACCGAAGGTTTCTG+TGG - chr5_1:54820514-54820533 None:intergenic 50.0%
GCGTAAACTCCTGGATTGTC+GGG - chr5_1:54820657-54820676 None:intergenic 50.0%
GTTCCATGAGCGTAAACTCC+TGG - chr5_1:54820666-54820685 None:intergenic 50.0%
!! AAGTCCAAAAGCGTCTTCGG+CGG + chr5_1:54820860-54820879 Msa0737560:CDS 50.0%
AACCAAGATGGCCAGAGTCA+TGG + chr5_1:54820897-54820916 Msa0737560:CDS 50.0%
! CCTTTTCCCCTGCTTGTTCT+TGG - chr5_1:54821022-54821041 None:intergenic 50.0%
CCAAGAACAAGCAGGGGAAA+AGG + chr5_1:54821019-54821038 Msa0737560:CDS 50.0%
TCAGGGTCTACGCAACATCG+TGG + chr5_1:54812625-54812644 Msa0737560:intron 55.0%
CAATGACGCGTGTCCGACAA+CGG + chr5_1:54813014-54813033 Msa0737560:intron 55.0%
AATGACGCGTGTCCGACAAC+GGG + chr5_1:54813015-54813034 Msa0737560:intron 55.0%
TGATGTCATGAGGACCGAGG+AGG + chr5_1:54813396-54813415 Msa0737560:intron 55.0%
GATGTCATGAGGACCGAGGA+GGG + chr5_1:54813397-54813416 Msa0737560:intron 55.0%
AATGACGCAGCAGATGAGGG+GGG + chr5_1:54814195-54814214 Msa0737560:CDS 55.0%
CACCGCCAAGCCAGAGAAAT+CGG + chr5_1:54814456-54814475 Msa0737560:CDS 55.0%
!! TGCCGATTTCTCTGGCTTGG+CGG - chr5_1:54814461-54814480 None:intergenic 55.0%
!! CAGTGCCGATTTCTCTGGCT+TGG - chr5_1:54814464-54814483 None:intergenic 55.0%
ACTGTTTGGGCACGCCAACT+TGG + chr5_1:54815154-54815173 Msa0737560:CDS 55.0%
TTTGGGCACGCCAACTTGGT+GGG + chr5_1:54815158-54815177 Msa0737560:CDS 55.0%
! AGGGACGCGTTTTCATCTGC+GGG + chr5_1:54816012-54816031 Msa0737560:CDS 55.0%
TTTCATCTGCGGGGCCTGTA+TGG + chr5_1:54816022-54816041 Msa0737560:CDS 55.0%
TTCATCTGCGGGGCCTGTAT+GGG + chr5_1:54816023-54816042 Msa0737560:CDS 55.0%
TACCCTGTGTCGGACTTCTG+TGG - chr5_1:54816060-54816079 None:intergenic 55.0%
CCCTTCGAAAGACTGCACAC+AGG - chr5_1:54816172-54816191 None:intergenic 55.0%
GATGCTCCTGCTTCAGAGGA+AGG + chr5_1:54816412-54816431 Msa0737560:CDS 55.0%
!! CGGAAAGAAAGGCACCGAAC+AGG - chr5_1:54816953-54816972 None:intergenic 55.0%
! GTCACTTTCCGATCTGTCCC+TGG + chr5_1:54817307-54817326 Msa0737560:intron 55.0%
GCATGGACAGCCATGGTCTT+AGG - chr5_1:54817875-54817894 None:intergenic 55.0%
ACCCAATAATTGGCGCGGTG+CGG - chr5_1:54818249-54818268 None:intergenic 55.0%
CACCGCGCCAATTATTGGGT+TGG + chr5_1:54818249-54818268 Msa0737560:intron 55.0%
GGCCAACCCAATAATTGGCG+CGG - chr5_1:54818254-54818273 None:intergenic 55.0%
CTAGACTGCACTACCCGGAT+GGG + chr5_1:54818337-54818356 Msa0737560:intron 55.0%
CCCGGATGGGTATAAGACAC+TGG + chr5_1:54818350-54818369 Msa0737560:intron 55.0%
TCCTCTGTACCTCGTGTTCC+AGG + chr5_1:54819526-54819545 Msa0737560:intron 55.0%
GTACCTCGTGTTCCAGGCTA+TGG + chr5_1:54819532-54819551 Msa0737560:intron 55.0%
CTACCATAGCCTGGAACACG+AGG - chr5_1:54819538-54819557 None:intergenic 55.0%
TCCTGAACATCGGCCCATTG+TGG + chr5_1:54820527-54820546 Msa0737560:CDS 55.0%
TCCACAATGGGCCGATGTTC+AGG - chr5_1:54820531-54820550 None:intergenic 55.0%
!! AGTCCAAAAGCGTCTTCGGC+GGG + chr5_1:54820861-54820880 Msa0737560:CDS 55.0%
CACCATGACTCTGGCCATCT+TGG - chr5_1:54820902-54820921 None:intergenic 55.0%
! CGATTTTCACGGGGAGGACG+AGG - chr5_1:54813754-54813773 None:intergenic 60.0%
TTCCCAGGCCTGCTGCAAGA+AGG + chr5_1:54815037-54815056 Msa0737560:intron 60.0%
AGCCTTCTTGCAGCAGGCCT+GGG - chr5_1:54815042-54815061 None:intergenic 60.0%
GTTTGGGCACGCCAACTTGG+TGG + chr5_1:54815157-54815176 Msa0737560:CDS 60.0%
! TTGGGCACGCCAACTTGGTG+GGG + chr5_1:54815159-54815178 Msa0737560:CDS 60.0%
! GGGACGCGTTTTCATCTGCG+GGG + chr5_1:54816013-54816032 Msa0737560:CDS 60.0%
GTCGCCCCTGACCTTTGGTT+GGG - chr5_1:54817401-54817420 None:intergenic 60.0%
CAACCAAAGGTCAGGGGCGA+CGG + chr5_1:54817400-54817419 Msa0737560:intron 60.0%
CGCGTGTCAGAGGTGGAAAG+CGG + chr5_1:54817996-54818015 Msa0737560:intron 60.0%
TGGGCGCTATTTGGGTGGTG+CGG - chr5_1:54818211-54818230 None:intergenic 60.0%
TCCCGCACCGCGCCAATTAT+TGG + chr5_1:54818244-54818263 Msa0737560:intron 60.0%
CCCAATAATTGGCGCGGTGC+GGG - chr5_1:54818248-54818267 None:intergenic 60.0%
CCCGCACCGCGCCAATTATT+GGG + chr5_1:54818245-54818264 Msa0737560:intron 60.0%
GGCGCGGCCAACCCAATAAT+TGG - chr5_1:54818259-54818278 None:intergenic 60.0%
GGCAGCTAGACTGCACTACC+CGG + chr5_1:54818332-54818351 Msa0737560:intron 60.0%
GCTAGACTGCACTACCCGGA+TGG + chr5_1:54818336-54818355 Msa0737560:intron 60.0%
ACTCAATGCAGGCGTCCACG+AGG + chr5_1:54819291-54819310 Msa0737560:intron 60.0%
CTCAATGCAGGCGTCCACGA+GGG + chr5_1:54819292-54819311 Msa0737560:intron 60.0%
GCCTGGAACACGAGGTACAG+AGG - chr5_1:54819530-54819549 None:intergenic 60.0%
ACGGAACTCCAGCTGCCGAA+GGG + chr5_1:54819624-54819643 Msa0737560:CDS 60.0%
! CAGCAGCTGGCTCCTCACAA+CGG + chr5_1:54820606-54820625 Msa0737560:CDS 60.0%
! TTGCCCGCCGAAGACGCTTT+TGG - chr5_1:54820867-54820886 None:intergenic 60.0%
CAGCCTTCTTGCAGCAGGCC+TGG - chr5_1:54815043-54815062 None:intergenic 65.0%
ATCTGCGGGGCCTGTATGGG+AGG + chr5_1:54816026-54816045 Msa0737560:CDS 65.0%
CGTCGCCCCTGACCTTTGGT+TGG - chr5_1:54817402-54817421 None:intergenic 65.0%
GAACCGTCGCCCCTGACCTT+TGG - chr5_1:54817406-54817425 None:intergenic 65.0%
ATCACCGCACCAGGCCGCAT+CGG + chr5_1:54817953-54817972 Msa0737560:intron 65.0%
GCGGGAGCGGGGTGTATAGT+GGG - chr5_1:54818230-54818249 None:intergenic 65.0%
TGCGGGAGCGGGGTGTATAG+TGG - chr5_1:54818231-54818250 None:intergenic 65.0%
TAATTGGCGCGGTGCGGGAG+CGG - chr5_1:54818243-54818262 None:intergenic 65.0%
TTCGAAAATGCGGCGCGGCG+CGG - chr5_1:54818275-54818294 None:intergenic 65.0%
GACGGAACTCCAGCTGCCGA+AGG + chr5_1:54819623-54819642 Msa0737560:CDS 65.0%
CGGAACTCCAGCTGCCGAAG+GGG + chr5_1:54819625-54819644 Msa0737560:CDS 65.0%
GCTGAAACCCCTTCGGCAGC+TGG - chr5_1:54819635-54819654 None:intergenic 65.0%
GGGCCGATGTTCAGGACCGA+AGG - chr5_1:54820523-54820542 None:intergenic 65.0%
GACGCAGCAGATGAGGGGGG+TGG + chr5_1:54814198-54814217 Msa0737560:CDS 70.0%
! GGCACGCCAACTTGGTGGGG+AGG + chr5_1:54815162-54815181 Msa0737560:CDS 70.0%
! TGGCCTGACACGCGCCGATG+CGG - chr5_1:54817970-54817989 None:intergenic 70.0%
! ACCTCTGACACGCGCCGACG+TGG - chr5_1:54817990-54818009 None:intergenic 70.0%
ACGTCGGCGCGTGTCAGAGG+TGG + chr5_1:54817989-54818008 Msa0737560:intron 70.0%
AATTGGCGCGGTGCGGGAGC+GGG - chr5_1:54818242-54818261 None:intergenic 70.0%
TGCAGGCGTCCACGAGGGAC+TGG + chr5_1:54819297-54819316 Msa0737560:intron 70.0%
! TGACACGCGCCGATGCGGCC+TGG - chr5_1:54817965-54817984 None:intergenic 75.0%
! AGGCCGCATCGGCGCGTGTC+AGG + chr5_1:54817964-54817983 Msa0737560:intron 75.0%
CGGCGCGTGTCAGGCCACGT+CGG + chr5_1:54817973-54817992 Msa0737560:intron 75.0%
GCCACGTCGGCGCGTGTCAG+AGG + chr5_1:54817986-54818005 Msa0737560:intron 75.0%
ATTGGCGCGGTGCGGGAGCG+GGG - chr5_1:54818241-54818260 None:intergenic 75.0%
!! CGCGCCGATGCGGCCTGGTG+CGG - chr5_1:54817960-54817979 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 54812135 54821508 54812135 ID=Msa0737560;Name=Msa0737560
chr5_1 mRNA 54812135 54821508 54812135 ID=Msa0737560-mRNA-1;Parent=Msa0737560;Name=Msa0737560-mRNA-1;_AED=0.11;_eAED=0.11;_QI=124|1|1|1|0.94|0.89|19|243|962
chr5_1 exon 54812135 54812366 54812135 ID=Msa0737560-mRNA-1:exon:15425;Parent=Msa0737560-mRNA-1
chr5_1 exon 54812455 54812515 54812455 ID=Msa0737560-mRNA-1:exon:15426;Parent=Msa0737560-mRNA-1
chr5_1 exon 54812629 54812665 54812629 ID=Msa0737560-mRNA-1:exon:15427;Parent=Msa0737560-mRNA-1
chr5_1 exon 54813663 54813793 54813663 ID=Msa0737560-mRNA-1:exon:15428;Parent=Msa0737560-mRNA-1
chr5_1 exon 54813927 54814031 54813927 ID=Msa0737560-mRNA-1:exon:15429;Parent=Msa0737560-mRNA-1
chr5_1 exon 54814127 54814235 54814127 ID=Msa0737560-mRNA-1:exon:15430;Parent=Msa0737560-mRNA-1
chr5_1 exon 54814398 54814531 54814398 ID=Msa0737560-mRNA-1:exon:15431;Parent=Msa0737560-mRNA-1
chr5_1 exon 54815044 54815183 54815044 ID=Msa0737560-mRNA-1:exon:15432;Parent=Msa0737560-mRNA-1
chr5_1 exon 54815858 54815908 54815858 ID=Msa0737560-mRNA-1:exon:15433;Parent=Msa0737560-mRNA-1
chr5_1 exon 54815994 54816076 54815994 ID=Msa0737560-mRNA-1:exon:15434;Parent=Msa0737560-mRNA-1
chr5_1 exon 54816180 54816234 54816180 ID=Msa0737560-mRNA-1:exon:15435;Parent=Msa0737560-mRNA-1
chr5_1 exon 54816319 54816433 54816319 ID=Msa0737560-mRNA-1:exon:15436;Parent=Msa0737560-mRNA-1
chr5_1 exon 54818747 54819224 54818747 ID=Msa0737560-mRNA-1:exon:15437;Parent=Msa0737560-mRNA-1
chr5_1 exon 54819302 54819515 54819302 ID=Msa0737560-mRNA-1:exon:15438;Parent=Msa0737560-mRNA-1
chr5_1 exon 54819608 54819678 54819608 ID=Msa0737560-mRNA-1:exon:15439;Parent=Msa0737560-mRNA-1
chr5_1 exon 54819895 54820063 54819895 ID=Msa0737560-mRNA-1:exon:15440;Parent=Msa0737560-mRNA-1
chr5_1 exon 54820168 54820300 54820168 ID=Msa0737560-mRNA-1:exon:15441;Parent=Msa0737560-mRNA-1
chr5_1 exon 54820517 54821262 54820517 ID=Msa0737560-mRNA-1:exon:15442;Parent=Msa0737560-mRNA-1
chr5_1 exon 54821317 54821508 54821317 ID=Msa0737560-mRNA-1:exon:15443;Parent=Msa0737560-mRNA-1
chr5_1 five_prime_UTR 54812135 54812258 54812135 ID=Msa0737560-mRNA-1:five_prime_utr;Parent=Msa0737560-mRNA-1
chr5_1 CDS 54812259 54812366 54812259 ID=Msa0737560-mRNA-1:cds;Parent=Msa0737560-mRNA-1
chr5_1 CDS 54812455 54812515 54812455 ID=Msa0737560-mRNA-1:cds;Parent=Msa0737560-mRNA-1
chr5_1 CDS 54812629 54812665 54812629 ID=Msa0737560-mRNA-1:cds;Parent=Msa0737560-mRNA-1
chr5_1 CDS 54813663 54813793 54813663 ID=Msa0737560-mRNA-1:cds;Parent=Msa0737560-mRNA-1
chr5_1 CDS 54813927 54814031 54813927 ID=Msa0737560-mRNA-1:cds;Parent=Msa0737560-mRNA-1
chr5_1 CDS 54814127 54814235 54814127 ID=Msa0737560-mRNA-1:cds;Parent=Msa0737560-mRNA-1
chr5_1 CDS 54814398 54814531 54814398 ID=Msa0737560-mRNA-1:cds;Parent=Msa0737560-mRNA-1
chr5_1 CDS 54815044 54815183 54815044 ID=Msa0737560-mRNA-1:cds;Parent=Msa0737560-mRNA-1
chr5_1 CDS 54815858 54815908 54815858 ID=Msa0737560-mRNA-1:cds;Parent=Msa0737560-mRNA-1
chr5_1 CDS 54815994 54816076 54815994 ID=Msa0737560-mRNA-1:cds;Parent=Msa0737560-mRNA-1
chr5_1 CDS 54816180 54816234 54816180 ID=Msa0737560-mRNA-1:cds;Parent=Msa0737560-mRNA-1
chr5_1 CDS 54816319 54816433 54816319 ID=Msa0737560-mRNA-1:cds;Parent=Msa0737560-mRNA-1
chr5_1 CDS 54818747 54819224 54818747 ID=Msa0737560-mRNA-1:cds;Parent=Msa0737560-mRNA-1
chr5_1 CDS 54819302 54819515 54819302 ID=Msa0737560-mRNA-1:cds;Parent=Msa0737560-mRNA-1
chr5_1 CDS 54819608 54819678 54819608 ID=Msa0737560-mRNA-1:cds;Parent=Msa0737560-mRNA-1
chr5_1 CDS 54819895 54820063 54819895 ID=Msa0737560-mRNA-1:cds;Parent=Msa0737560-mRNA-1
chr5_1 CDS 54820168 54820300 54820168 ID=Msa0737560-mRNA-1:cds;Parent=Msa0737560-mRNA-1
chr5_1 CDS 54820517 54821211 54820517 ID=Msa0737560-mRNA-1:cds;Parent=Msa0737560-mRNA-1
chr5_1 three_prime_UTR 54821212 54821262 54821212 ID=Msa0737560-mRNA-1:three_prime_utr;Parent=Msa0737560-mRNA-1
chr5_1 three_prime_UTR 54821317 54821508 54821317 ID=Msa0737560-mRNA-1:three_prime_utr;Parent=Msa0737560-mRNA-1
Gene Sequence

>Msa0737560

ATGGGTAAGAAAAGCAAAGCAATGAAGGAAAATAGCGACGGCACTGTTAAACAATGTCCCTTAACACTCTTTGTTTCTAATTTACCCTATTCCTTCACTAACTCTCAGCTTGAACAAACTTTCAGTGAAGTTGGACCTGTTAGACGTTGTTTCATGGTTACTCAAAAGGGGTCTACGCAACATCGTGGTTTTGGTTATGTTCAATTTGCTGTTGAGAATGACGCTAACCAAGCCATTGAGCTGAAGAACGGTTCATTGGTTGGTGACCGGAAAATTGTAGTGAAGCACGCAATGCCTCGTCCTCCCCGTGAAAATCGAAGATCAAAACCGGATCAAGAGGGCAATGAAGGCGATCTCACAGAATCAAAAAATGATGATAAAGACAGCGGATTATCTGGAGCAGAGAAGCCTGTTTCAGTTCCAAAAGAACCAAAGGAAGAAGAAGTGAAAGTTTTGGATAAACCGAAAAACTCAAGGAAGCCCGCGGAAATAAAAAAAGCAGCTCTTTGTAATGACGCAGCAGATGAGGGGGGTGGCTCAGAAAAGCAGAAGGTTGCTAGAACTGTTATATTTGGTTGTCTTGTGAATTCTGCTATGGCTGAAGATGTTCACCGCCAAGCCAGAGAAATCGGCACTGTGTGTTCTATTAAGCATCCCCTTTCAAGGAATGATCTTCTGCAGCATGGCCTGCTGCAAGAAGGCTGTTCTTTCAATGCTTCAGCTGTACTTTATACAAGTGTAAAATCAGCTCGTGCTTCTGTTGCAACATTGCATAAAAAAGAGATAGGAGGGGGAACTGTTTGGGCACGCCAACTTGGTGGGGAGGGAGCCAAGACTCAGAAATGGAAGCTTATTGTCAGAAACCTTCCTTTCAAGGCCAAAGAAAATGAAATAAGGGACGCGTTTTCATCTGCGGGGCCTGTATGGGAGGTATTCATTCCACAGAAGTCCGACACAGGTCTTTCGAAGGGTTTTGCATTTGTAAAATTCACCTGCAAGCAAGATGCTGAAAATGCGATTCGAAAACTCAATGGATCGAAGTTTGGGAGTCGTCTCATAGCTGTTGATTGGGCTGTTCCAAAAAAGATATTTAGTAGTGATACCAATGATGCTCCTGCTTCAGAGGAAGGACAACAAAAGGTGACAGATGAAGATAGTAGTACTACTACTGAGGATGATCTTGAGAATACTGACAAAGAATCTGATCAAGGGGATGATAGTGATATTGATAGTGTTGTGGAGGAAGATGTTCCTTCTGACGATGATTTTGAAAAGGAAGCAGACATTGCAAGAAAAATTCTTAACAACTTGATTACATCCTCTGCCAAAGATGAATCTGTAAATAATGATTCCGTGTCGTCTGAAGAAAAGAACAAGCCAAAATCAAAGGAAACTGTTAAGGGTGCAGATAGTAAAACATCTAAAGAGTCCGACAAGGTTTCAGATATTTCTAAGCCTGAAACTTCCAAGGAAACAGAAGATGATTTGCACAGAACAGTTTTTATAACCAATCTTCCCTTTGAATTAGATACCGAAGAAGTGAAGCAACGATTTTCTGCATTTGGTGAAGTAGAATATTTTGCTCCTGTTCTCCACCAAGTGACCAAGCGTCCACGAGGGACTGGTTTTCTTAAGTTTAAAACCGCGGAAGCAGCTGATAATGCAATTTCAACTGCCAATACTGCTTCTGGGATGGGTATTTTGGTAAAGGGTAGACCATTAAAGGTTTTAAAGGCTCTGGACAAGAAATCGGCTCATGACAAGGAACATGAGAAAGAAAAAAATGAAGTTCAAGACCACCGCAATCTTTACTTGGCGAAGGAGGGACTTATTCTTGACGGAACTCCAGCTGCCGAAGGGGTTTCAGCCACTGATATGTCAAAACGCAAAAATTTGGAAAGGAAAAAGAAGATGAAGCTTCAATCCCCAAATTTTCATGTTTCAAAAACTAGACTTGTTATCTACAACTTACCAAAGTCAATGAATGAAAAACAACTTAAGACGCTTTGCATTGATGCAGTCATCTCTAGAGCTACCAAGCAAACACCTGTAATTCGGCAGATAAAGATTTTGAAAGATGGCAGGAAAGGAAAGGCTACTCAAGAACAGCAGTATTCCCGTGGAGTCGCTTTTCTTGAATTTTCAGAGCATCAACATGCCCTTGTTGCGTTGAGAGTTCTTAACAATAATCCTGAAACCTTCGGTCCTGAACATCGGCCCATTGTGGAGTTTGCTCTTGATAATATCCAGAAACTGAAACTTCGTAACGAAAAGCTACAGTATCAGCAGCTGGCTCCTCACAACGGCAACAACAGAAACGAAAATGATAAACCCGACAATCCAGGAGTTTACGCTCATGGAACTGACAGAAAACAAAAATCTCAAGAGCATGACAAACCAGCAAAAGACTTGGTACCAAATTCAAATAGCGAACAAGGTGGTAAAGTGCCAAATGGAAAATCTCCTCAAGGAGGCAAATCCAAAAGACAGAAAGAGAACCCCAAGAGTACAAATTCCGAAGTGATATCATCGAAAGAAAGTCCAAAAGCGTCTTCGGCGGGCAAGCTGAAAAGTAACCAAGATGGCCAGAGTCATGGTGCTAAATTACATGAAGGTAAAAATAGTTCCATTGAAAGTAGTAGGAAAATCTCAGGAAAGAAAGAAGACGCGATATTTGGAAAGAGGAAGATGCAAAACCAAGAACAAGCAGGGGAAAAGGTTTCTAGGAAAAGGCCAAAGAAGAACAAAGATTCAGTAGGGAAGGACATGGTAGATAAGCTTGACATGCTTATAGAACAATATAGATCCAAGTTCTCACACAAGGGTTCTCAAGGAAATGATGGTGAGAAAAAACAATCTAAACAGCTTAGGAAATGGTTCCAATCATAA
Protein sequence

>Msa0737560

MGKKSKAMKENSDGTVKQCPLTLFVSNLPYSFTNSQLEQTFSEVGPVRRCFMVTQKGSTQHRGFGYVQFAVENDANQAIELKNGSLVGDRKIVVKHAMPRPPRENRRSKPDQEGNEGDLTESKNDDKDSGLSGAEKPVSVPKEPKEEEVKVLDKPKNSRKPAEIKKAALCNDAADEGGGSEKQKVARTVIFGCLVNSAMAEDVHRQAREIGTVCSIKHPLSRNDLLQHGLLQEGCSFNASAVLYTSVKSARASVATLHKKEIGGGTVWARQLGGEGAKTQKWKLIVRNLPFKAKENEIRDAFSSAGPVWEVFIPQKSDTGLSKGFAFVKFTCKQDAENAIRKLNGSKFGSRLIAVDWAVPKKIFSSDTNDAPASEEGQQKVTDEDSSTTTEDDLENTDKESDQGDDSDIDSVVEEDVPSDDDFEKEADIARKILNNLITSSAKDESVNNDSVSSEEKNKPKSKETVKGADSKTSKESDKVSDISKPETSKETEDDLHRTVFITNLPFELDTEEVKQRFSAFGEVEYFAPVLHQVTKRPRGTGFLKFKTAEAADNAISTANTASGMGILVKGRPLKVLKALDKKSAHDKEHEKEKNEVQDHRNLYLAKEGLILDGTPAAEGVSATDMSKRKNLERKKKMKLQSPNFHVSKTRLVIYNLPKSMNEKQLKTLCIDAVISRATKQTPVIRQIKILKDGRKGKATQEQQYSRGVAFLEFSEHQHALVALRVLNNNPETFGPEHRPIVEFALDNIQKLKLRNEKLQYQQLAPHNGNNRNENDKPDNPGVYAHGTDRKQKSQEHDKPAKDLVPNSNSEQGGKVPNGKSPQGGKSKRQKENPKSTNSEVISSKESPKASSAGKLKSNQDGQSHGAKLHEGKNSSIESSRKISGKKEDAIFGKRKMQNQEQAGEKVSRKRPKKNKDSVGKDMVDKLDMLIEQYRSKFSHKGSQGNDGEKKQSKQLRKWFQS*