AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1380790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1380790 MtrunA17_Chr4g0048841 97.475 198 5 0 7 204 41 238 7.24e-140 390
Msa1380790 MtrunA17_Chr2g0318961 83.333 198 33 0 4 201 3 200 4.63e-122 343
Msa1380790 MtrunA17_Chr8g0361451 82.323 198 35 0 4 201 3 200 6.15e-119 335
Msa1380790 MtrunA17_Chr2g0280641 76.617 201 47 0 4 204 3 203 2.23e-112 319
Msa1380790 MtrunA17_Chr5g0429671 69.802 202 60 1 1 201 1 202 1.88e-101 291
Msa1380790 MtrunA17_Chr4g0034601 67.005 197 64 1 5 200 52 248 1.30e-91 268
Msa1380790 MtrunA17_Chr5g0403681 63.725 204 73 1 1 203 49 252 8.36e-91 266
Msa1380790 MtrunA17_Chr4g0048831 90.833 120 7 1 85 204 1 116 7.16e-74 218
Msa1380790 MtrunA17_Chr8g0361461 79.487 117 24 0 85 201 1 117 5.92e-64 193
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1380790 AT4G27270.1 85.427 199 29 0 4 202 3 201 1.09e-124 350
Msa1380790 AT5G54500.1 84.500 200 31 0 4 203 3 202 2.47e-124 350
Msa1380790 AT4G27270.3 84.737 190 29 0 13 202 1 190 2.72e-117 332
Msa1380790 AT4G27270.2 84.737 190 29 0 13 202 1 190 2.72e-117 332
Msa1380790 AT5G58800.1 65.842 202 68 1 1 201 1 202 2.19e-97 281
Msa1380790 AT5G58800.2 65.842 202 68 1 1 201 1 202 2.19e-97 281
Msa1380790 AT5G54500.2 83.750 160 26 0 4 163 3 162 7.21e-97 281
Msa1380790 AT4G27270.4 86.000 150 21 0 53 202 1 150 1.20e-92 268
Msa1380790 AT4G36750.1 66.497 197 65 1 5 200 74 270 1.75e-91 269

Find 83 sgRNAs with CRISPR-Local

Find 884 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGGCTTCCCGACAAGATT+TGG 0.247346 tig0020408:+43443 Msa1380790:CDS
ACCTCCGCAGGCAGAGTTTC+AGG 0.301695 tig0020408:-43338 None:intergenic
CTCTGCCTGCGGAGGTCGTT+GGG 0.320468 tig0020408:+43345 Msa1380790:CDS
ATAATTGGCACATCACTCTT+TGG 0.334809 tig0020408:-31555 None:intergenic
ATAATTGGCACATCACTCTT+TGG 0.334809 tig0020408:-43383 None:intergenic
GAGGCTGATGGTTTGTTGCT+TGG 0.342120 tig0020408:+43425 Msa1380790:CDS
AGCGCATCAGGTGTAATAAT+TGG 0.347422 tig0020408:-43398 None:intergenic
CATCAGGGGAAGTACTTTGC+TGG 0.357702 tig0020408:+44128 Msa1380790:CDS
TGGCGTACTCAGGCACTTGC+AGG 0.358990 tig0020408:+43515 Msa1380790:CDS
GTGCCCATTGGTTACACATT+TGG 0.364441 tig0020408:+43993 Msa1380790:CDS
TGCTGCTTTGATCCACGTTT+TGG 0.365246 tig0020408:+44428 Msa1380790:three_prime_UTR
TGCTCAGTTTAAAGCATTCC+TGG 0.369486 tig0020408:+43475 Msa1380790:CDS
GTTTGAGATGGAGAGCATAA+AGG 0.387084 tig0020408:+44025 Msa1380790:CDS
ACTTTAGTGGTAGCCATTGA+TGG 0.387732 tig0020408:-41593 None:intergenic
TTTGAGATGGAGAGCATAAA+GGG 0.400626 tig0020408:+44026 Msa1380790:CDS
TGCGGAGGTCGTTGGGAAGA+TGG 0.403064 tig0020408:+43352 Msa1380790:CDS
TTACACAATGTAAACTTTAG+TGG 0.417852 tig0020408:-41606 None:intergenic
GGGTGGTTCCCCATATGGTT+CGG 0.423157 tig0020408:+44046 Msa1380790:CDS
TAATTAACATCTTATTCTGT+TGG 0.429715 tig0020408:-44249 None:intergenic
GCGAAGGTTCCCGAACCATA+TGG 0.433025 tig0020408:-44056 None:intergenic
ACAGCCTACCGAGTTGGAAT+TGG 0.433561 tig0020408:+44094 Msa1380790:CDS
GGTGGTTCCCCATATGGTTC+GGG 0.436267 tig0020408:+44047 Msa1380790:CDS
TCAGCCTCAGGTAGCGCATC+AGG 0.442003 tig0020408:-43410 None:intergenic
TCTCGTGCCGTCTCCGGCGA+AGG 0.448926 tig0020408:-44072 None:intergenic
GCGGAGGTCGTTGGGAAGAT+GGG 0.453021 tig0020408:+43353 Msa1380790:CDS
AAAGCATTCCTGGATGCAAC+TGG 0.456257 tig0020408:+43485 Msa1380790:CDS
ATAAAGGGTGGTTCCCCATA+TGG 0.462146 tig0020408:+44041 Msa1380790:CDS
CCCGACAAGATTTGGAATGA+TGG 0.467275 tig0020408:+43451 Msa1380790:CDS
ATTGGTTACACATTTGGTGC+TGG 0.468517 tig0020408:+43999 Msa1380790:CDS
ATTGGCTCAAGCTTTCCATC+AGG 0.473009 tig0020408:+44112 Msa1380790:CDS
CGAAGGTTCCCGAACCATAT+GGG 0.473122 tig0020408:-44055 None:intergenic
TATGGTTCGGGAACCTTCGC+CGG 0.481405 tig0020408:+44059 Msa1380790:CDS
AGGCTGTCTCGTGCCGTCTC+CGG 0.489257 tig0020408:-44078 None:intergenic
CCATCATTCCAAATCTTGTC+GGG 0.494553 tig0020408:-43451 None:intergenic
TTTAGTTACTATTCTATGTA+CGG 0.496466 tig0020408:+42999 Msa1380790:intron
GCCATCATTCCAAATCTTGT+CGG 0.505362 tig0020408:-43452 None:intergenic
ATCTTCCCAACGACCTCCGC+AGG 0.515536 tig0020408:-43350 None:intergenic
ACTCTGCCTGCGGAGGTCGT+TGG 0.519015 tig0020408:+43344 Msa1380790:CDS
ACAACACGCTTTATGTATAG+AGG 0.519424 tig0020408:-44189 None:intergenic
TCGGGAACCTTCGCCGGAGA+CGG 0.520100 tig0020408:+44065 Msa1380790:CDS
AACTAACAAAGTGGTGTTGG+TGG 0.526440 tig0020408:-41533 None:intergenic
CTTTGCTTCTACTCCTTCCA+CGG 0.530210 tig0020408:-43066 None:intergenic
ATTGGCACATCACTCTTTGG+AGG 0.535259 tig0020408:-31552 None:intergenic
ATTGGCACATCACTCTTTGG+AGG 0.535259 tig0020408:-43380 None:intergenic
CAGTAGGCACAAGAAGCAAT+TGG 0.535822 tig0020408:+44405 Msa1380790:three_prime_UTR
GCACCAAATGTGTAACCAAT+GGG 0.537151 tig0020408:-43996 None:intergenic
AGTAGAAGCAAAGCTATGGC+AGG 0.545320 tig0020408:+43076 Msa1380790:CDS
AGCAACAAACCATCAGCCTC+AGG 0.546743 tig0020408:-43422 None:intergenic
CACGAGACAGCCTACCGAGT+TGG 0.547705 tig0020408:+44088 Msa1380790:CDS
AGAAACTAACAAAGTGGTGT+TGG 0.548954 tig0020408:-41536 None:intergenic
AAAGGGGCGGCCTCCGTGGA+AGG 0.550707 tig0020408:+43053 Msa1380790:CDS
TGGATGCAACTGGTGGCCTA+TGG 0.551588 tig0020408:+43495 Msa1380790:CDS
GCACTTGCAGGAAAGCCTGC+AGG 0.551589 tig0020408:+43527 Msa1380790:CDS
GTGCTGTAAAAGATTCCTGC+AGG 0.556948 tig0020408:-43542 None:intergenic
ATCACTCAGCTTGCTCACCA+TGG 0.564969 tig0020408:+43960 Msa1380790:CDS
ATAGGCCACCAGTTGCATCC+AGG 0.570687 tig0020408:-43493 None:intergenic
ACACATCTATCATCCATCAA+TGG 0.572795 tig0020408:+41580 Msa1380790:exon
AGCACCAAATGTGTAACCAA+TGG 0.574155 tig0020408:-43997 None:intergenic
TGGTGCTGGTATGTTTGAGA+TGG 0.575960 tig0020408:+44013 Msa1380790:CDS
AAGGAGTAGAAGCAAAGCTA+TGG 0.577868 tig0020408:+43072 Msa1380790:CDS
TGGTGGCCTATGGCGTACTC+AGG 0.578013 tig0020408:+43505 Msa1380790:CDS
CAGCAAAGTACTTCCCCTGA+TGG 0.579078 tig0020408:-44127 None:intergenic
TTTAAAAGGGGCGGCCTCCG+TGG 0.580700 tig0020408:+43049 Msa1380790:CDS
TGGCTCAAGCTTTCCATCAG+GGG 0.583615 tig0020408:+44114 Msa1380790:CDS
TTGGCTCAAGCTTTCCATCA+GGG 0.591341 tig0020408:+44113 Msa1380790:CDS
GGCATTGCAAAGAAGCTCAA+AGG 0.592964 tig0020408:+44149 Msa1380790:CDS
CAAGTGCCTGAGTACGCCAT+AGG 0.599625 tig0020408:-43511 None:intergenic
AAAAGAAGAAACTAACAAAG+TGG 0.600305 tig0020408:-41542 None:intergenic
ATGGTGAGCAAGCTGAGTGA+TGG 0.600815 tig0020408:-43958 None:intergenic
TACAGCACTGGTTCTCAAGG+AGG 0.602179 tig0020408:+43557 Msa1380790:CDS
GAGGTCGTTGGGAAGATGGG+AGG 0.615091 tig0020408:+43356 Msa1380790:CDS
ACCTGAAACTCTGCCTGCGG+AGG 0.615512 tig0020408:+43337 Msa1380790:CDS
GAAGGTTCCCGAACCATATG+GGG 0.617327 tig0020408:-44054 None:intergenic
AGCACTGGTTCTCAAGGAGG+AGG 0.618456 tig0020408:+43560 Msa1380790:CDS
TGAGCCAATTCCAACTCGGT+AGG 0.619105 tig0020408:-44098 None:intergenic
GATGCGCTACCTGAGGCTGA+TGG 0.631007 tig0020408:+43413 Msa1380790:CDS
AGCTTGAGCCAATTCCAACT+CGG 0.640803 tig0020408:-44102 None:intergenic
GCATTCCTGGATGCAACTGG+TGG 0.654481 tig0020408:+43488 Msa1380790:CDS
TACACCTGATGCGCTACCTG+AGG 0.657213 tig0020408:+43406 Msa1380790:CDS
TGCTTCTACTCCTTCCACGG+AGG 0.674111 tig0020408:-43063 None:intergenic
ACATCACCACTTCCAAAACG+TGG 0.674908 tig0020408:-44440 None:intergenic
GGTACCTGAAACTCTGCCTG+CGG 0.684253 tig0020408:+43334 Msa1380790:intron
GAGATGGAGAGCATAAAGGG+TGG 0.732219 tig0020408:+44029 Msa1380790:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAATTATAAATAAATA+AGG - tig0020408:32597-32616 None:intergenic 0.0%
!! ACTTATATGAATTTATATAT+TGG - tig0020408:32060-32079 None:intergenic 10.0%
!!! TTTAATAAAAGTTCTTTTTA+AGG + tig0020408:32613-32632 Msa1380790:intron 10.0%
!! TTCAAATAAAATGTAATATA+AGG - tig0020408:34045-34064 None:intergenic 10.0%
!!! TTTTGATAACTTAATTAATT+AGG - tig0020408:34287-34306 None:intergenic 10.0%
!! TGAAAAATAAATATTAATGT+GGG - tig0020408:34479-34498 None:intergenic 10.0%
!!! AATAAAAATTTTACATAATC+AGG - tig0020408:34596-34615 None:intergenic 10.0%
!!! TCTAAATTTTTTATGATAAA+AGG + tig0020408:35494-35513 Msa1380790:intron 10.0%
!!! TTATTGGTTAAAATTTATAT+CGG + tig0020408:35598-35617 Msa1380790:intron 10.0%
!!! CTTTTTTTTTCTTATAATAT+GGG - tig0020408:35886-35905 None:intergenic 10.0%
!!! TCTTTTTTTTTCTTATAATA+TGG - tig0020408:35887-35906 None:intergenic 10.0%
!! AAAACTATTACAAATATATT+AGG - tig0020408:38070-38089 None:intergenic 10.0%
!!! AAAATGAGTTTTTATAAATT+AGG + tig0020408:40906-40925 Msa1380790:intron 10.0%
!!! TTATTTTGAACATTTTAATT+TGG - tig0020408:43202-43221 None:intergenic 10.0%
!!! TTTTTCTTTAATTAAGAAAT+GGG - tig0020408:43638-43657 None:intergenic 10.0%
!! ATATATAAACAGTTTAAATT+TGG - tig0020408:31971-31990 None:intergenic 10.0%
!! ACTGTTTATATATAAGTTAT+AGG + tig0020408:31978-31997 Msa1380790:intron 15.0%
!!! ATTAAAAGAGCATATATTAA+TGG - tig0020408:32558-32577 None:intergenic 15.0%
!!! TAAGAGTTCTTTATTTAATA+AGG - tig0020408:32923-32942 None:intergenic 15.0%
!!! AATGATAGAAAATTTGTTTT+TGG + tig0020408:33113-33132 Msa1380790:intron 15.0%
!! TATCTTAAAATCATTGTATA+AGG - tig0020408:33182-33201 None:intergenic 15.0%
!! CATTGAATAATTGATATATT+TGG + tig0020408:33246-33265 Msa1380790:intron 15.0%
!! ATATCAATGTTATATAACAT+TGG + tig0020408:33384-33403 Msa1380790:intron 15.0%
!! ATACCAATGTTATATAATAT+TGG - tig0020408:33496-33515 None:intergenic 15.0%
!!! GAACAATTTTTTTTTTGAAA+AGG + tig0020408:33588-33607 Msa1380790:intron 15.0%
!!! ACATTTTATTTGAAGTTATA+AGG + tig0020408:34051-34070 Msa1380790:intron 15.0%
!!! ACTAAGAACTTTTTTTTTTT+TGG - tig0020408:34364-34383 None:intergenic 15.0%
!! CTGAAAAATAAATATTAATG+TGG - tig0020408:34480-34499 None:intergenic 15.0%
!!! CACATTAATATTTATTTTTC+AGG + tig0020408:34478-34497 Msa1380790:intron 15.0%
!!! TTCAGGAATAAATAATTTTA+AGG + tig0020408:34495-34514 Msa1380790:intron 15.0%
!!! TGTTTATATTTTTCTCTTTA+AGG + tig0020408:34734-34753 Msa1380790:intron 15.0%
!! TGATAACTTAATTCTAAATT+TGG + tig0020408:35231-35250 Msa1380790:intron 15.0%
!! ATTTAAATACTATTTGCATT+CGG + tig0020408:35428-35447 Msa1380790:intron 15.0%
!!! TTTTATTGGTTAAAATTTAC+AGG - tig0020408:35669-35688 None:intergenic 15.0%
!!! AATATTCAATTCAATCTTTT+AGG + tig0020408:35748-35767 Msa1380790:intron 15.0%
!!! AAAACAATTTTCATTAGTTA+TGG + tig0020408:35997-36016 Msa1380790:intron 15.0%
!!! TCTTTTTTGCTTTTTTTTTA+AGG + tig0020408:36126-36145 Msa1380790:intron 15.0%
!! AATGTAAAAACATAAAACTT+TGG - tig0020408:36789-36808 None:intergenic 15.0%
!!! AAAAAATGATTAATGCTTTT+TGG - tig0020408:37785-37804 None:intergenic 15.0%
!! ACACACAAAATAAATAAATA+AGG + tig0020408:38343-38362 Msa1380790:intron 15.0%
!! ATTTAAATTAGATATTAGCA+AGG - tig0020408:38551-38570 None:intergenic 15.0%
!! AATTTAAATTTGAAAATGCA+TGG - tig0020408:39541-39560 None:intergenic 15.0%
!!! TCAAATTTAAATTTTTGTCT+AGG + tig0020408:39548-39567 Msa1380790:intron 15.0%
!! TTAGTTAAATGATATAAGTT+CGG + tig0020408:41343-41362 Msa1380790:intron 15.0%
!!! TTTTTTTTTTGCAAATTCAA+AGG - tig0020408:41974-41993 None:intergenic 15.0%
!!! AAAAACTACTGTATTTTTTT+TGG + tig0020408:41990-42009 Msa1380790:intron 15.0%
!!! AAAACTACTGTATTTTTTTT+GGG + tig0020408:41991-42010 Msa1380790:intron 15.0%
!!! ATAATTTTACTTATTTCTGT+TGG + tig0020408:42050-42069 Msa1380790:intron 15.0%
!! ATTCTCTAATATAATTTCAT+CGG - tig0020408:42087-42106 None:intergenic 15.0%
!! TATTTGAATATATGTTTCTT+TGG + tig0020408:42588-42607 Msa1380790:intron 15.0%
!! TCTTATGAAAATGTAAAATA+TGG + tig0020408:42631-42650 Msa1380790:intron 15.0%
!! ATAAAATAATTTATGTTGCT+TGG + tig0020408:42878-42897 Msa1380790:intron 15.0%
!!! CTTTTTCTTTAATTAAGAAA+TGG - tig0020408:43639-43658 None:intergenic 15.0%
!! CATTTCTTAATTAAAGAAAA+AGG + tig0020408:43637-43656 Msa1380790:intron 15.0%
!! ACTGTTTATATATAAGTTAT+AGG + tig0020408:31978-31997 Msa1380790:intron 15.0%
!! TAAAATAAGTTAATCCAAAT+AGG + tig0020408:43893-43912 Msa1380790:intron 15.0%
!! TCATATAAGTTAATCCAAAT+AGG + tig0020408:32070-32089 Msa1380790:intron 20.0%
!!! AAGTTTTGTGATGATATATT+TGG + tig0020408:32481-32500 Msa1380790:intron 20.0%
!!! AGTTTTGTGATGATATATTT+GGG + tig0020408:32482-32501 Msa1380790:intron 20.0%
!! AAGTAACAGACAATTATATA+AGG - tig0020408:32845-32864 None:intergenic 20.0%
!!! TTTTTTTAAGCATCTTCAAT+GGG - tig0020408:32951-32970 None:intergenic 20.0%
!!! ATTTTTTTAAGCATCTTCAA+TGG - tig0020408:32952-32971 None:intergenic 20.0%
!!! CAAATTTTCTATCATTTTTG+TGG - tig0020408:33109-33128 None:intergenic 20.0%
!! TTATTCAATGAACTTGAAAA+AGG - tig0020408:33236-33255 None:intergenic 20.0%
!! TATATAACATTGGTCAATAA+AGG + tig0020408:33394-33413 Msa1380790:intron 20.0%
!! TGACCAATATTATATAACAT+TGG + tig0020408:33490-33509 Msa1380790:intron 20.0%
!! CAAACCCAAATAAAAATATA+CGG - tig0020408:33707-33726 None:intergenic 20.0%
!! AAATTCTTATATATTGAGTG+AGG - tig0020408:33986-34005 None:intergenic 20.0%
!! TATGTATTATTATGTATCTG+AGG + tig0020408:34106-34125 Msa1380790:intron 20.0%
!! ATATTCTTAACTTTATGGTA+AGG - tig0020408:34230-34249 None:intergenic 20.0%
!! CTAACATATTCTTAACTTTA+TGG - tig0020408:34235-34254 None:intergenic 20.0%
!! CATAAAGTTAAGAATATGTT+AGG + tig0020408:34233-34252 Msa1380790:intron 20.0%
!!! TATTTTTTTTCCCCATTTTT+TGG + tig0020408:34426-34445 Msa1380790:intron 20.0%
!!! AAAACTTTTTAATCTGAACT+TGG - tig0020408:34697-34716 None:intergenic 20.0%
!!! AGTTCAGATTAAAAAGTTTT+AGG + tig0020408:34697-34716 Msa1380790:intron 20.0%
!! TTTCAAATGGAAAATGATAT+TGG + tig0020408:35007-35026 Msa1380790:intron 20.0%
!! ATATCTAACTGTAATAAAAG+AGG + tig0020408:35063-35082 Msa1380790:intron 20.0%
!!! TCTCATCACTTTTTTTTTAT+TGG + tig0020408:35582-35601 Msa1380790:intron 20.0%
!!! CTCAATACACTTTTTTTTAT+TGG - tig0020408:35683-35702 None:intergenic 20.0%
!! ATTCTTCAATAAGTGAATAA+TGG - tig0020408:35731-35750 None:intergenic 20.0%
!! TAAACAATGAAAAAATTGTG+AGG - tig0020408:35845-35864 None:intergenic 20.0%
!!! TTTTTTCTTATAATATGGGA+CGG - tig0020408:35882-35901 None:intergenic 20.0%
!!! ATCCTTGAAATTAGTTTTAT+AGG + tig0020408:35966-35985 Msa1380790:intron 20.0%
!!! TTTTGCATTTAATTTACCTT+TGG + tig0020408:36057-36076 Msa1380790:intron 20.0%
!!! TCAAAAATTATCTTTTCCAA+AGG - tig0020408:36076-36095 None:intergenic 20.0%
!!! TTTTGTTCTTGATTGTAAAA+GGG - tig0020408:36395-36414 None:intergenic 20.0%
!!! ATTTTGTTCTTGATTGTAAA+AGG - tig0020408:36396-36415 None:intergenic 20.0%
!!! TTATGTTTTTACATTTCCAA+AGG + tig0020408:36794-36813 Msa1380790:intron 20.0%
!!! TTTTACAAAATTTATCTCCA+GGG - tig0020408:36852-36871 None:intergenic 20.0%
!! CACTAATATTATAATCTTGA+TGG + tig0020408:36887-36906 Msa1380790:intron 20.0%
!!! CTAAAATCAAGAATTTTCTT+TGG - tig0020408:37095-37114 None:intergenic 20.0%
!!! CAAAGAAAATTCTTGATTTT+AGG + tig0020408:37093-37112 Msa1380790:intron 20.0%
!! TTGATCAAGATTTAAAAATG+TGG - tig0020408:37344-37363 None:intergenic 20.0%
!!! TTCCTAATTCTGATTTTATT+GGG - tig0020408:37569-37588 None:intergenic 20.0%
!!! TTTCCTAATTCTGATTTTAT+TGG - tig0020408:37570-37589 None:intergenic 20.0%
!!! TTGTCTGTTCATAAAATTTT+TGG - tig0020408:37708-37727 None:intergenic 20.0%
!! AAGATGCTCATAATATAATA+TGG + tig0020408:37863-37882 Msa1380790:intron 20.0%
!!! TTTGTAATAGTTTTCTTCAA+AGG + tig0020408:38076-38095 Msa1380790:intron 20.0%
!!! TTATTTATTTTGTGTGTTGA+AGG - tig0020408:38340-38359 None:intergenic 20.0%
!! TAATGTCTTGTATAAATTAG+TGG - tig0020408:38737-38756 None:intergenic 20.0%
!! TTTATACAAGACATTACATA+AGG + tig0020408:38741-38760 Msa1380790:intron 20.0%
!!! AATTTTCAATTTCTTGCTTT+AGG + tig0020408:39387-39406 Msa1380790:intron 20.0%
!!! TTATCCTCTTCTTTTAAAAA+AGG - tig0020408:39597-39616 None:intergenic 20.0%
!! TTAACTGAAGTTTATATGAA+AGG - tig0020408:39761-39780 None:intergenic 20.0%
!! TTCTAATCATATTAATGTTG+AGG - tig0020408:40017-40036 None:intergenic 20.0%
!!! ATTCATTTGTTTTATTTGAG+TGG + tig0020408:40149-40168 Msa1380790:intron 20.0%
!!! TATATTTTCTTTTTGAGTCA+AGG - tig0020408:40404-40423 None:intergenic 20.0%
!! TAGTGCAAAAAGAAAATATA+TGG + tig0020408:40434-40453 Msa1380790:intron 20.0%
!! AGAAAATATATGGTAACAAT+TGG + tig0020408:40444-40463 Msa1380790:intron 20.0%
!!! ATTATACGTATTTTTGTATC+AGG - tig0020408:40477-40496 None:intergenic 20.0%
!! AAAAATACGTATAATTGTGA+TGG + tig0020408:40482-40501 Msa1380790:intron 20.0%
!! GTATAAAATGGAAGAAATAA+TGG + tig0020408:40638-40657 Msa1380790:intron 20.0%
!!! TGAGTTTTTATAAATTAGGA+TGG + tig0020408:40910-40929 Msa1380790:intron 20.0%
!!! TTTTTATAAATTAGGATGGA+GGG + tig0020408:40914-40933 Msa1380790:intron 20.0%
!!! CATTACTTCAATTTTCTTTT+CGG + tig0020408:41089-41108 Msa1380790:intron 20.0%
!!! AATTATGTTTCTATTGACAA+TGG - tig0020408:41204-41223 None:intergenic 20.0%
!! TTGAAATTTGAAAGAAAGAA+TGG - tig0020408:41633-41652 None:intergenic 20.0%
!! ACTACTAAATTGATAAAACT+GGG - tig0020408:41787-41806 None:intergenic 20.0%
!! TACTACTAAATTGATAAAAC+TGG - tig0020408:41788-41807 None:intergenic 20.0%
!!! AAACTACTGTATTTTTTTTG+GGG + tig0020408:41992-42011 Msa1380790:intron 20.0%
!! TTCATAAGAAATAATTGAGA+TGG - tig0020408:42620-42639 None:intergenic 20.0%
!! TTTAGTTACTATTCTATGTA+CGG + tig0020408:42999-43018 Msa1380790:intron 20.0%
!! TAATTAACATCTTATTCTGT+TGG - tig0020408:44252-44271 None:intergenic 20.0%
!! AGATGTTAATTAAAAAAGAG+AGG + tig0020408:44260-44279 Msa1380790:three_prime_UTR 20.0%
! CTTTACTTTAATTAAGAGAC+GGG - tig0020408:31815-31834 None:intergenic 25.0%
! CCTTTACTTTAATTAAGAGA+CGG - tig0020408:31816-31835 None:intergenic 25.0%
! CGTCTCTTAATTAAAGTAAA+GGG + tig0020408:31814-31833 Msa1380790:intron 25.0%
! CAATTAACATCTTATTCTGT+TGG - tig0020408:32400-32419 None:intergenic 25.0%
!! GTTTTGTGATGATATATTTG+GGG + tig0020408:32483-32502 Msa1380790:intron 25.0%
!! AAAGAGCATATATTAATGGA+CGG - tig0020408:32554-32573 None:intergenic 25.0%
!! AATAAATAAGGAGTACATGT+GGG - tig0020408:32585-32604 None:intergenic 25.0%
!! AAATAAATAAGGAGTACATG+TGG - tig0020408:32586-32605 None:intergenic 25.0%
!!! AGTTCTTTTTAAGGATTAGA+TGG + tig0020408:32622-32641 Msa1380790:intron 25.0%
! GTAGTAAAATATGTACAAGT+TGG - tig0020408:32779-32798 None:intergenic 25.0%
! ATAAGGATCATTCAATGTTA+AGG - tig0020408:32906-32925 None:intergenic 25.0%
!!! TTTTTTAAGCATCTTCAATG+GGG - tig0020408:32950-32969 None:intergenic 25.0%
! AACTTTCAGTGAAGTAAATT+TGG + tig0020408:32985-33004 Msa1380790:intron 25.0%
! TATTTGCTTATAAATGTGAC+CGG - tig0020408:33211-33230 None:intergenic 25.0%
! ATAATGAAGTCTAGATACAT+TGG + tig0020408:33272-33291 Msa1380790:intron 25.0%
!! CATTGGTTATTTAATGAATG+TGG + tig0020408:33289-33308 Msa1380790:intron 25.0%
! ATATAACATTGATATCCCAA+TGG - tig0020408:33379-33398 None:intergenic 25.0%
!!! TGTGTCCGTATATTTTTATT+TGG + tig0020408:33699-33718 Msa1380790:intron 25.0%
!!! GTGTCCGTATATTTTTATTT+GGG + tig0020408:33700-33719 Msa1380790:intron 25.0%
! TATGCGAGTAATATTTCTTT+GGG - tig0020408:33732-33751 None:intergenic 25.0%
! ATATGCGAGTAATATTTCTT+TGG - tig0020408:33733-33752 None:intergenic 25.0%
! TAATTACGAAGAGCAAATAA+CGG - tig0020408:33801-33820 None:intergenic 25.0%
! ATGAAACATGTATCTATACT+TGG + tig0020408:33854-33873 Msa1380790:intron 25.0%
! TGAAATTAGAGTTTAGTGAA+AGG + tig0020408:33896-33915 Msa1380790:intron 25.0%
! GAAATTAGAGTTTAGTGAAA+GGG + tig0020408:33897-33916 Msa1380790:intron 25.0%
! ATAAGGAGTTCAATAATCAT+CGG - tig0020408:34028-34047 None:intergenic 25.0%
! GGTATTTAAGTAGGAATATT+AGG + tig0020408:34127-34146 Msa1380790:intron 25.0%
! TAATTGAAACTCTTGTTCTA+AGG + tig0020408:34397-34416 Msa1380790:intron 25.0%
!!! GTATTGTATACTTCACTTTT+AGG - tig0020408:34815-34834 None:intergenic 25.0%
!! CTAACTTTATTTGATCAACT+CGG - tig0020408:34837-34856 None:intergenic 25.0%
! AACTTACACCAAATGTATAA+AGG - tig0020408:34879-34898 None:intergenic 25.0%
! AAATTACATCGCCAAATAAT+GGG + tig0020408:34907-34926 Msa1380790:intron 25.0%
! GTATGCTTAAAATAGTGATT+TGG - tig0020408:34970-34989 None:intergenic 25.0%
! GAATTGACATTACTTTCAAA+TGG + tig0020408:34994-35013 Msa1380790:intron 25.0%
! AATAGCATAAGAACTTAAGA+AGG - tig0020408:35282-35301 None:intergenic 25.0%
!! ATGTGGATTACATCTAAAAT+TGG - tig0020408:35628-35647 None:intergenic 25.0%
! CTCTCATCAAATTAATTATG+TGG - tig0020408:35645-35664 None:intergenic 25.0%
! CTCCTATAAAACTAATTTCA+AGG - tig0020408:35971-35990 None:intergenic 25.0%
!!! CTTGAAATTAGTTTTATAGG+AGG + tig0020408:35969-35988 Msa1380790:intron 25.0%
! AAAATATGCCAAATACATGT+AGG + tig0020408:36175-36194 Msa1380790:intron 25.0%
!! CTTTTACAAAATTTATCTCC+AGG - tig0020408:36853-36872 None:intergenic 25.0%
!! AGAAAATTCTTGATTTTAGG+AGG + tig0020408:37096-37115 Msa1380790:intron 25.0%
! TCAAGATTTAAAAATGTGGA+AGG - tig0020408:37340-37359 None:intergenic 25.0%
!! TCTTGTTTGTCGATTATTTA+AGG - tig0020408:37601-37620 None:intergenic 25.0%
!!! CATAAAATTTTTGGTGGTAT+GGG - tig0020408:37699-37718 None:intergenic 25.0%
!!! TCATAAAATTTTTGGTGGTA+TGG - tig0020408:37700-37719 None:intergenic 25.0%
!!! TCTGTTCATAAAATTTTTGG+TGG - tig0020408:37705-37724 None:intergenic 25.0%
!!! AATGATTAATGCTTTTTGGT+GGG - tig0020408:37781-37800 None:intergenic 25.0%
!!! AAATGATTAATGCTTTTTGG+TGG - tig0020408:37782-37801 None:intergenic 25.0%
! TATTAACTTTGTGCCAAATA+CGG + tig0020408:37954-37973 Msa1380790:intron 25.0%
! TACAAATATATTAGGTGTCA+GGG - tig0020408:38062-38081 None:intergenic 25.0%
! TTACAAATATATTAGGTGTC+AGG - tig0020408:38063-38082 None:intergenic 25.0%
!! TAACGTTATAATTGCTATTG+AGG - tig0020408:38623-38642 None:intergenic 25.0%
!! AATTTTCTGGATAATGATGA+GGG - tig0020408:39158-39177 None:intergenic 25.0%
!! TAATTTTCTGGATAATGATG+AGG - tig0020408:39159-39178 None:intergenic 25.0%
! CATTATCCAGAAAATTAATG+CGG + tig0020408:39162-39181 Msa1380790:intron 25.0%
! TGATTCAAGAAGATAAGTAT+TGG - tig0020408:39277-39296 None:intergenic 25.0%
!! AAATTTTCAATCGTGACATT+AGG + tig0020408:39638-39657 Msa1380790:intron 25.0%
! GGATTTATTGTTACAATTAG+TGG - tig0020408:40334-40353 None:intergenic 25.0%
! AACTCTATGTATAATTGTGA+TGG + tig0020408:40367-40386 Msa1380790:intron 25.0%
!!! TTATTTGCATTGATTGGATT+TGG - tig0020408:40518-40537 None:intergenic 25.0%
!! TTTGGTTTATTTGCATTGAT+TGG - tig0020408:40524-40543 None:intergenic 25.0%
! AACCAAAATAATTGTCATGT+TGG + tig0020408:40537-40556 Msa1380790:intron 25.0%
!! TTCCAACATGACAATTATTT+TGG - tig0020408:40542-40561 None:intergenic 25.0%
!! AAAATGGAAGAAATAATGGA+AGG + tig0020408:40642-40661 Msa1380790:intron 25.0%
!! GTTTTTATAAATTAGGATGG+AGG + tig0020408:40913-40932 Msa1380790:intron 25.0%
! AAATAGCAAAGTTAATTGAC+CGG + tig0020408:41373-41392 Msa1380790:intron 25.0%
! TTACACAATGTAAACTTTAG+TGG - tig0020408:41609-41628 None:intergenic 25.0%
!! TTTATCACTCTCTGAATTTT+TGG + tig0020408:41736-41755 Msa1380790:intron 25.0%
! TTGAATTCAAATACCCAAAA+GGG - tig0020408:41886-41905 None:intergenic 25.0%
! ATTGAATTCAAATACCCAAA+AGG - tig0020408:41887-41906 None:intergenic 25.0%
!!! AACTACTGTATTTTTTTTGG+GGG + tig0020408:41993-42012 Msa1380790:intron 25.0%
! AAAAAAAATGTTTGAGCATG+AGG + tig0020408:42119-42138 Msa1380790:intron 25.0%
! TAGCTTATATGAAAACAGTT+TGG - tig0020408:42354-42373 None:intergenic 25.0%
!! CTTTTCCTTTTTATTCAAGA+AGG + tig0020408:42404-42423 Msa1380790:intron 25.0%
! AAGAAATAATTGAGATGGTT+GGG - tig0020408:42615-42634 None:intergenic 25.0%
! TAAGAAATAATTGAGATGGT+TGG - tig0020408:42616-42635 None:intergenic 25.0%
! AATATGGAAGCTTAATTGAT+TGG + tig0020408:42647-42666 Msa1380790:intron 25.0%
! TATAGCTTTCATAAGTCTTA+TGG - tig0020408:42914-42933 None:intergenic 25.0%
!!! TAGCTCAAGAGATTTTAAAA+GGG + tig0020408:43036-43055 Msa1380790:CDS 25.0%
! TCAATCAATCTTTACATGTT+TGG + tig0020408:43166-43185 Msa1380790:intron 25.0%
!! ACCATTAGATATCTTTAAGA+TGG + tig0020408:43221-43240 Msa1380790:intron 25.0%
! ACCATCTTAAAGATATCTAA+TGG - tig0020408:43225-43244 None:intergenic 25.0%
!! GATGATAATTTTGTAAATGC+AGG - tig0020408:43303-43322 None:intergenic 25.0%
! AATTATCATCTGATACGTAT+AGG + tig0020408:43313-43332 Msa1380790:intron 25.0%
! AGCAAACAAGCTTAAATATT+TGG + tig0020408:43683-43702 Msa1380790:intron 25.0%
! TGAAATCAGAAAATCAATCA+GGG - tig0020408:43919-43938 None:intergenic 25.0%
! TTGAAATCAGAAAATCAATC+AGG - tig0020408:43920-43939 None:intergenic 25.0%
!!! TCTGATACTTTTTTGTATCA+TGG + tig0020408:44488-44507 Msa1380790:three_prime_UTR 25.0%
! CAAGAATGCTTTAAATTGAG+CGG - tig0020408:31649-31668 None:intergenic 30.0%
AAACAAAACTGAGTGAGATT+CGG - tig0020408:31786-31805 None:intergenic 30.0%
CCGTCTCTTAATTAAAGTAA+AGG + tig0020408:31813-31832 Msa1380790:intron 30.0%
! TTTCAGATGGAGAGTATAAA+GGG + tig0020408:32174-32193 Msa1380790:intron 30.0%
GTTTATCAGATATGAAGTTG+AGG + tig0020408:32435-32454 Msa1380790:intron 30.0%
! ATAAATAAGGAGTACATGTG+GGG - tig0020408:32584-32603 None:intergenic 30.0%
!!! TTTTTGGAATTGACAGTATG+AGG + tig0020408:33129-33148 Msa1380790:intron 30.0%
ATATAACATTGGTATCCCAA+TGG + tig0020408:33501-33520 Msa1380790:intron 30.0%
AAACATGTATCTATACTTGG+TGG + tig0020408:33857-33876 Msa1380790:intron 30.0%
AAAGGGTTTAACTATTAGAG+AGG + tig0020408:33914-33933 Msa1380790:intron 30.0%
CTTATATATTGAGTGAGGTT+TGG - tig0020408:33981-34000 None:intergenic 30.0%
! TGTATCTGAGGTATTTAAGT+AGG + tig0020408:34118-34137 Msa1380790:intron 30.0%
!! AGGCATAGATATATTGACTT+CGG - tig0020408:34210-34229 None:intergenic 30.0%
! ACAACCAAAAGCATGAAAAT+TGG + tig0020408:34788-34807 Msa1380790:intron 30.0%
!! CGAGTTGATCAAATAAAGTT+AGG + tig0020408:34835-34854 Msa1380790:intron 30.0%
TGATCAAATAAAGTTAGGAC+TGG + tig0020408:34840-34859 Msa1380790:intron 30.0%
ACCAAATGTATAAAGGTTGA+GGG - tig0020408:34872-34891 None:intergenic 30.0%
CAAATTACATCGCCAAATAA+TGG + tig0020408:34906-34925 Msa1380790:intron 30.0%
!! GATTTGGTAACTTTTGTTGT+AGG - tig0020408:34954-34973 None:intergenic 30.0%
ATGGAAAATGATATTGGCAT+AGG + tig0020408:35013-35032 Msa1380790:intron 30.0%
ACATAAATGAGCATGTTACA+AGG + tig0020408:35127-35146 Msa1380790:intron 30.0%
AATGACGAAAATGAAAGCTA+AGG - tig0020408:35258-35277 None:intergenic 30.0%
CTTTAATATTCACAAGTCGA+TGG - tig0020408:35338-35357 None:intergenic 30.0%
!! CATCGACTTGTGAATATTAA+AGG + tig0020408:35336-35355 Msa1380790:intron 30.0%
ACTTGTGAATATTAAAGGAG+TGG + tig0020408:35341-35360 Msa1380790:intron 30.0%
!!! TTTTTTCCTGTCATATGTAC+CGG + tig0020408:35456-35475 Msa1380790:intron 30.0%
TAGACAAGAAAATAATGTCC+CGG - tig0020408:35478-35497 None:intergenic 30.0%
ATGATAAAAGGAAAAGCCAT+CGG + tig0020408:35506-35525 Msa1380790:intron 30.0%
! TGGATTACATCTAAAATTGG+TGG - tig0020408:35625-35644 None:intergenic 30.0%
GAATCATGCACTAAATTAGT+GGG - tig0020408:35780-35799 None:intergenic 30.0%
TGAATCATGCACTAAATTAG+TGG - tig0020408:35781-35800 None:intergenic 30.0%
ATGATGTACCTACATGTATT+TGG - tig0020408:36186-36205 None:intergenic 30.0%
TAGGTACATCATCAATAACA+TGG + tig0020408:36194-36213 Msa1380790:intron 30.0%
AGGTACATCATCAATAACAT+GGG + tig0020408:36195-36214 Msa1380790:intron 30.0%
TTAGATGATAGTAACGAGTT+TGG - tig0020408:36349-36368 None:intergenic 30.0%
TCTTTGTGATATAAATGTGG+GGG - tig0020408:36479-36498 None:intergenic 30.0%
CTCTTTGTGATATAAATGTG+GGG - tig0020408:36480-36499 None:intergenic 30.0%
CCTCTTTGTGATATAAATGT+GGG - tig0020408:36481-36500 None:intergenic 30.0%
CCACATTTATATCACAAAGA+GGG + tig0020408:36479-36498 Msa1380790:intron 30.0%
CACATTTATATCACAAAGAG+GGG + tig0020408:36480-36499 Msa1380790:intron 30.0%
TTTATGGGACATAATTGACA+GGG - tig0020408:36917-36936 None:intergenic 30.0%
ATTTATGGGACATAATTGAC+AGG - tig0020408:36918-36937 None:intergenic 30.0%
TTACAATGAACACAATCAAG+TGG + tig0020408:37009-37028 Msa1380790:intron 30.0%
TACAATGAACACAATCAAGT+GGG + tig0020408:37010-37029 Msa1380790:intron 30.0%
AACTCTCATATGCATGTTAA+TGG - tig0020408:37153-37172 None:intergenic 30.0%
! AGGACAAAATGATTTGGAAA+GGG - tig0020408:37239-37258 None:intergenic 30.0%
TATTGGAGGACAAAATGATT+TGG - tig0020408:37245-37264 None:intergenic 30.0%
! CATAATTTTACCTGCATCAA+AGG + tig0020408:37372-37391 Msa1380790:intron 30.0%
!! CTCAAAAATAGGATTAGTTG+TGG + tig0020408:37395-37414 Msa1380790:intron 30.0%
GCAAAAATTGTGGTAAAACA+GGG - tig0020408:37498-37517 None:intergenic 30.0%
!!! CATTTTTAGCGCAAAAATTG+TGG - tig0020408:37508-37527 None:intergenic 30.0%
! GATTTTATTGGGTCGAAAAT+TGG - tig0020408:37558-37577 None:intergenic 30.0%
GACCCAATAAAATCAGAATT+AGG + tig0020408:37564-37583 Msa1380790:intron 30.0%
! TCTTTTAATGTGGCTATGTT+AGG - tig0020408:37660-37679 None:intergenic 30.0%
TAACATAGCCACATTAAAAG+AGG + tig0020408:37659-37678 Msa1380790:intron 30.0%
!! ATGATTAATGCTTTTTGGTG+GGG - tig0020408:37780-37799 None:intergenic 30.0%
GAGAAATCAACAAGCTTATT+TGG + tig0020408:37833-37852 Msa1380790:intron 30.0%
TCGAGAGGTAATGATTAAAT+CGG - tig0020408:37903-37922 None:intergenic 30.0%
TTTGGCACAAAGTTAATAGT+TGG - tig0020408:37952-37971 None:intergenic 30.0%
! GTTTTATAAAGGACCGTATT+TGG - tig0020408:37970-37989 None:intergenic 30.0%
! AATAGTTTTCTTCAAAGGTG+AGG + tig0020408:38081-38100 Msa1380790:intron 30.0%
! ATAGTTTTCTTCAAAGGTGA+GGG + tig0020408:38082-38101 Msa1380790:intron 30.0%
! ATACTTATGAACTAGCTTCA+GGG - tig0020408:38156-38175 None:intergenic 30.0%
!!! TGACTGCTTTTTGTTTTTCA+GGG - tig0020408:38218-38237 None:intergenic 30.0%
!!! ATGACTGCTTTTTGTTTTTC+AGG - tig0020408:38219-38238 None:intergenic 30.0%
GAAAAACAAAAAGCAGTCAT+TGG + tig0020408:38219-38238 Msa1380790:intron 30.0%
TAAATAAATAAGGCGACAAC+AGG + tig0020408:38353-38372 Msa1380790:intron 30.0%
!! AATGGGTTTTGACAGTAAAT+GGG - tig0020408:38482-38501 None:intergenic 30.0%
!! AAATGGGTTTTGACAGTAAA+TGG - tig0020408:38483-38502 None:intergenic 30.0%
AAGGAAGTGATGCTTAAAAT+GGG - tig0020408:38499-38518 None:intergenic 30.0%
TAATGAGCAAAAGACTATGA+AGG - tig0020408:38782-38801 None:intergenic 30.0%
! ATGTTTGTTGAGTTTAGTGA+CGG + tig0020408:38820-38839 Msa1380790:intron 30.0%
TTGTAATTCTGACATCTTTC+AGG - tig0020408:38880-38899 None:intergenic 30.0%
CAAAATTGTTGAAAAAAGCC+CGG + tig0020408:38906-38925 Msa1380790:intron 30.0%
! ATTTTCTGGATAATGATGAG+GGG - tig0020408:39157-39176 None:intergenic 30.0%
GACTGAAGCATGAAAAAATT+TGG + tig0020408:39205-39224 Msa1380790:intron 30.0%
!! TTCAAGAAGATAAGTATTGG+CGG - tig0020408:39274-39293 None:intergenic 30.0%
!!! TCCTCCTTTTTTAAAAGAAG+AGG + tig0020408:39590-39609 Msa1380790:intron 30.0%
!! TCCTCTTCTTTTAAAAAAGG+AGG - tig0020408:39594-39613 None:intergenic 30.0%
TGTCACGATTGAAAATTTAG+TGG - tig0020408:39636-39655 None:intergenic 30.0%
TGTACATGGTTTAAGAGTTT+AGG - tig0020408:39731-39750 None:intergenic 30.0%
AAACTCTTAAACCATGTACA+CGG + tig0020408:39731-39750 Msa1380790:intron 30.0%
!! AGGCGATTTTAATGATATTC+TGG - tig0020408:39864-39883 None:intergenic 30.0%
TGGCAATTTACAGGATATTA+CGG - tig0020408:39971-39990 None:intergenic 30.0%
CTGATGTAAATAAAGGAAAG+TGG - tig0020408:39991-40010 None:intergenic 30.0%
GAGGTTACTGATGTAAATAA+AGG - tig0020408:39998-40017 None:intergenic 30.0%
! TGCTTTTCTGTTAGTAGTAA+TGG - tig0020408:40103-40122 None:intergenic 30.0%
AATGAATTTCGTTACTTGCT+TGG - tig0020408:40136-40155 None:intergenic 30.0%
!!! TTAATTTTGGAACTACGTTC+AGG + tig0020408:40227-40246 Msa1380790:intron 30.0%
ATCAAACACAAGATTATGCA+TGG + tig0020408:40302-40321 Msa1380790:intron 30.0%
! ATAGAGTTATTGAGTGTTGT+TGG - tig0020408:40355-40374 None:intergenic 30.0%
TCTATGTATAATTGTGATGG+AGG + tig0020408:40370-40389 Msa1380790:intron 30.0%
! CTATGTATAATTGTGATGGA+GGG + tig0020408:40371-40390 Msa1380790:intron 30.0%
! TATGTATAATTGTGATGGAG+GGG + tig0020408:40372-40391 Msa1380790:intron 30.0%
!! TTTGTTTTCAGCATCGAATT+CGG + tig0020408:40712-40731 Msa1380790:intron 30.0%
GAAAAAGAGTCTATAACAGT+AGG + tig0020408:40749-40768 Msa1380790:intron 30.0%
! CTTTTGCTTATATTAGTGAC+CGG - tig0020408:41045-41064 None:intergenic 30.0%
! CTTTTGCTTATATTAGTGAC+CGG + tig0020408:41045-41064 Msa1380790:intron 30.0%
TAATATGTTAGTTACACCTC+CGG - tig0020408:41067-41086 None:intergenic 30.0%
TTCGGTTTCAACATTACTTT+AGG + tig0020408:41107-41126 Msa1380790:intron 30.0%
AATAGCAAAGTTAATTGACC+GGG + tig0020408:41374-41393 Msa1380790:intron 30.0%
!!! TTTTTAGTTGCTTAATTGCC+CGG - tig0020408:41395-41414 None:intergenic 30.0%
GACACATGCACTATATAATA+TGG + tig0020408:41475-41494 Msa1380790:intron 30.0%
TGAATTCAAATACCCAAAAG+GGG - tig0020408:41885-41904 None:intergenic 30.0%
GAATAACTGTAAGAATGGAT+AGG - tig0020408:42166-42185 None:intergenic 30.0%
CTTAGGAATAACTGTAAGAA+TGG - tig0020408:42171-42190 None:intergenic 30.0%
TCTGTCTCAAAAAACTTCTT+AGG - tig0020408:42188-42207 None:intergenic 30.0%
TTTACAACCTTCTACTGAAA+AGG - tig0020408:42457-42476 None:intergenic 30.0%
! TTTTCAGTAGAAGGTTGTAA+AGG + tig0020408:42456-42475 Msa1380790:intron 30.0%
AGAAATAATTGAGATGGTTG+GGG - tig0020408:42614-42633 None:intergenic 30.0%
TAAGTCAATCACACTTTATC+TGG + tig0020408:42808-42827 Msa1380790:intron 30.0%
!!! ACACTTTATCTGGCTTTTAT+TGG + tig0020408:42818-42837 Msa1380790:intron 30.0%
! CTAGCTCAAGAGATTTTAAA+AGG + tig0020408:43035-43054 Msa1380790:CDS 30.0%
!! AGCTCAAGAGATTTTAAAAG+GGG + tig0020408:43037-43056 Msa1380790:CDS 30.0%
! TTGGTAGTAATAAGTCTTTC+TGG + tig0020408:43099-43118 Msa1380790:intron 30.0%
! ACATACCACATTTTCTCTTT+AGG + tig0020408:43124-43143 Msa1380790:intron 30.0%
! CATACCACATTTTCTCTTTA+GGG + tig0020408:43125-43144 Msa1380790:intron 30.0%
AAACAAAACTGAGTGAGATT+CGG - tig0020408:31786-31805 None:intergenic 30.0%
TTCTGATTTCAAAATTCTGC+AGG + tig0020408:43928-43947 Msa1380790:intron 30.0%
!!! ACTTTTTTGTATCATGGTCT+TGG + tig0020408:44494-44513 Msa1380790:three_prime_UTR 30.0%
!!! CTTTTTTGTATCATGGTCTT+GGG + tig0020408:44495-44514 Msa1380790:three_prime_UTR 30.0%
ATAATTGGCACATCACTCTT+TGG - tig0020408:31558-31577 None:intergenic 35.0%
! CGCTCAATTTAAAGCATTCT+TGG + tig0020408:31647-31666 Msa1380790:intron 35.0%
AACAAAACTGAGTGAGATTC+GGG - tig0020408:31785-31804 None:intergenic 35.0%
!!! CTCACTCAGTTTTGTTTCAA+AGG + tig0020408:31789-31808 Msa1380790:intron 35.0%
TGAAATCAGAAAAGCAGTCA+GGG - tig0020408:32096-32115 None:intergenic 35.0%
TTGAAATCAGAAAAGCAGTC+AGG - tig0020408:32097-32116 None:intergenic 35.0%
TTCTGATTTCAAAACTCTGC+AGG + tig0020408:32105-32124 Msa1380790:intron 35.0%
! TGAATGATTTTTGTGCCCAT+TGG + tig0020408:32129-32148 Msa1380790:intron 35.0%
! GTTTCAGATGGAGAGTATAA+AGG + tig0020408:32173-32192 Msa1380790:intron 35.0%
ACAACACGCTTTATGTATAG+AGG - tig0020408:32340-32359 None:intergenic 35.0%
ACTTTCTCCTGAGCAAATAA+CGG - tig0020408:32820-32839 None:intergenic 35.0%
CAATGTTAAGGTCACTTCAT+TGG - tig0020408:32894-32913 None:intergenic 35.0%
ATGTGTTAAGAAGAGAAGCA+TGG + tig0020408:33077-33096 Msa1380790:intron 35.0%
!!! TGATTTTAAGATACTCCCTC+CGG + tig0020408:33189-33208 Msa1380790:intron 35.0%
TTGCTTATAAATGTGACCAG+AGG + tig0020408:33323-33342 Msa1380790:intron 35.0%
TGCTTATAAATGTGACCAGA+GGG + tig0020408:33324-33343 Msa1380790:intron 35.0%
! TCAATAAAGGTGTGCTACAT+AGG + tig0020408:33407-33426 Msa1380790:intron 35.0%
CTTTCTCTATACGTACCATT+GGG - tig0020408:33519-33538 None:intergenic 35.0%
ACTTTCTCTATACGTACCAT+TGG - tig0020408:33520-33539 None:intergenic 35.0%
CTCGCATATAAGAGTGATAT+CGG + tig0020408:33744-33763 Msa1380790:intron 35.0%
TCGCATATAAGAGTGATATC+GGG + tig0020408:33745-33764 Msa1380790:intron 35.0%
! TGTATCTATACTTGGTGGTT+TGG + tig0020408:33862-33881 Msa1380790:intron 35.0%
! GTATCTATACTTGGTGGTTT+GGG + tig0020408:33863-33882 Msa1380790:intron 35.0%
! TATCTATACTTGGTGGTTTG+GGG + tig0020408:33864-33883 Msa1380790:intron 35.0%
AGGAATATTAGGATTCACCT+TGG + tig0020408:34138-34157 Msa1380790:intron 35.0%
AGAATATGTTAGGTTCTCAG+AGG + tig0020408:34243-34262 Msa1380790:intron 35.0%
! TTAATTAGGTTGCTGAACGT+GGG - tig0020408:34273-34292 None:intergenic 35.0%
! ATTAATTAGGTTGCTGAACG+TGG - tig0020408:34274-34293 None:intergenic 35.0%
TCAGTGAGCTTCCAAAAAAT+GGG - tig0020408:34440-34459 None:intergenic 35.0%
!! TTTCATGCTTTTGGTTGTCA+TGG - tig0020408:34786-34805 None:intergenic 35.0%
! AGGTCCAATTTTCATGCTTT+TGG - tig0020408:34795-34814 None:intergenic 35.0%
CACCAAATGTATAAAGGTTG+AGG - tig0020408:34873-34892 None:intergenic 35.0%
TAGTTGTCCTACCCATTATT+TGG - tig0020408:34921-34940 None:intergenic 35.0%
!! TTGGTAACTTTTGTTGTAGG+TGG - tig0020408:34951-34970 None:intergenic 35.0%
!! GTACAAATTGTTGACTCATG+AGG + tig0020408:35303-35322 Msa1380790:intron 35.0%
ATATTAAAGGAGTGGTTGAG+TGG + tig0020408:35349-35368 Msa1380790:intron 35.0%
! TTTTTCCTGTCATATGTACC+GGG + tig0020408:35457-35476 Msa1380790:intron 35.0%
! TACAATTCCTCGTTAGTTTG+TGG - tig0020408:35540-35559 None:intergenic 35.0%
TTCTTATAATATGGGACGGA+GGG - tig0020408:35878-35897 None:intergenic 35.0%
TTTCTTATAATATGGGACGG+AGG - tig0020408:35879-35898 None:intergenic 35.0%
GGTACATCATCAATAACATG+GGG + tig0020408:36196-36215 Msa1380790:intron 35.0%
GTACATCATCAATAACATGG+GGG + tig0020408:36197-36216 Msa1380790:intron 35.0%
CCCACATTTATATCACAAAG+AGG + tig0020408:36478-36497 Msa1380790:intron 35.0%
CCCTCTTTGTGATATAAATG+TGG - tig0020408:36482-36501 None:intergenic 35.0%
TTGTTCTTGCAAGAACAGAA+TGG - tig0020408:36510-36529 None:intergenic 35.0%
CAACTTATGTACTGAAAGAG+TGG - tig0020408:36726-36745 None:intergenic 35.0%
CTAAAGTTGTTCAAGTATGG+CGG - tig0020408:36948-36967 None:intergenic 35.0%
GTCCTAAAGTTGTTCAAGTA+TGG - tig0020408:36951-36970 None:intergenic 35.0%
!! CAACTTTAGGACACTCAATA+AGG + tig0020408:36959-36978 Msa1380790:intron 35.0%
TAGGACACTCAATAAGGATA+TGG + tig0020408:36965-36984 Msa1380790:intron 35.0%
! AAATGATTTGGAAAGGGGAA+AGG - tig0020408:37233-37252 None:intergenic 35.0%
! GGACAAAATGATTTGGAAAG+GGG - tig0020408:37238-37257 None:intergenic 35.0%
! GAGGACAAAATGATTTGGAA+AGG - tig0020408:37240-37259 None:intergenic 35.0%
! ATTTTGTCCTCCAATACAAG+TGG + tig0020408:37249-37268 Msa1380790:intron 35.0%
!! TATTTTTGAGCCTTTGATGC+AGG - tig0020408:37385-37404 None:intergenic 35.0%
TGCATCAAAGGCTCAAAAAT+AGG + tig0020408:37384-37403 Msa1380790:intron 35.0%
CGCAAAAATTGTGGTAAAAC+AGG - tig0020408:37499-37518 None:intergenic 35.0%
! GGATTTGACCTCTTTTAATG+TGG - tig0020408:37670-37689 None:intergenic 35.0%
!!! GGCGACATTTGGTTTTATAA+AGG - tig0020408:37981-38000 None:intergenic 35.0%
AAATATATTAGGTGTCAGGG+CGG - tig0020408:38059-38078 None:intergenic 35.0%
! TAGTTTTCTTCAAAGGTGAG+GGG + tig0020408:38083-38102 Msa1380790:intron 35.0%
AACATTGCTGAAGAAAACCT+CGG + tig0020408:38108-38127 Msa1380790:intron 35.0%
! CATACTTATGAACTAGCTTC+AGG - tig0020408:38157-38176 None:intergenic 35.0%
CTGAAGCTAGTTCATAAGTA+TGG + tig0020408:38155-38174 Msa1380790:intron 35.0%
!! ATCGTTAACAATGAGTTGGT+AGG - tig0020408:38415-38434 None:intergenic 35.0%
TGTCATCGTTAACAATGAGT+TGG - tig0020408:38419-38438 None:intergenic 35.0%
! TTGACAGTAAATGGGTTCAA+TGG - tig0020408:38474-38493 None:intergenic 35.0%
CAAGGAAGTGATGCTTAAAA+TGG - tig0020408:38500-38519 None:intergenic 35.0%
! TTTTAAGCATCACTTCCTTG+AGG + tig0020408:38500-38519 Msa1380790:intron 35.0%
!! AATTGATTGGCTTTACCTCA+AGG - tig0020408:38518-38537 None:intergenic 35.0%
AGGCGTATGATAGAATTGAT+TGG - tig0020408:38531-38550 None:intergenic 35.0%
GTGGTACATCATATGAAAGT+TGG - tig0020408:38601-38620 None:intergenic 35.0%
! CGTTATAATTGCTATTGAGG+TGG - tig0020408:38620-38639 None:intergenic 35.0%
TTATCAAGAATAGAACGCTC+TGG + tig0020408:38640-38659 Msa1380790:intron 35.0%
AAAAGACTATGAAGGATTGG+AGG - tig0020408:38774-38793 None:intergenic 35.0%
AGCAAAAGACTATGAAGGAT+TGG - tig0020408:38777-38796 None:intergenic 35.0%
! TCTTTTGCTCATTACCTCTA+GGG + tig0020408:38788-38807 Msa1380790:intron 35.0%
AACATTGCATTAATCCCTAG+AGG - tig0020408:38805-38824 None:intergenic 35.0%
!!! CGGGCTTTTTTCAACAATTT+TGG - tig0020408:38908-38927 None:intergenic 35.0%
TTAAACTCTTCAGCCTGAAA+GGG + tig0020408:38984-39003 Msa1380790:intron 35.0%
! TTTTCTGGATAATGATGAGG+GGG - tig0020408:39156-39175 None:intergenic 35.0%
! GGTAAACCGCATTAATTTTC+TGG - tig0020408:39171-39190 None:intergenic 35.0%
ATGATATTGTCTCTGATAGC+TGG - tig0020408:39499-39518 None:intergenic 35.0%
GAGACAATATCATGAATACC+TGG + tig0020408:39506-39525 Msa1380790:intron 35.0%
ATTTGAAAATGCATGGTGTG+TGG - tig0020408:39534-39553 None:intergenic 35.0%
GATTGAAAATTTAGTGGCTC+CGG - tig0020408:39630-39649 None:intergenic 35.0%
AAATCGCCTAAAATACACCT+TGG + tig0020408:39875-39894 Msa1380790:intron 35.0%
! TCACTTCCAAGGTGTATTTT+AGG - tig0020408:39884-39903 None:intergenic 35.0%
TAAAATACACCTTGGAAGTG+AGG + tig0020408:39883-39902 Msa1380790:intron 35.0%
AAAGGAAAGTGGCAATTTAC+AGG - tig0020408:39980-39999 None:intergenic 35.0%
TAACGTCTCACTTAAGAAGA+GGG + tig0020408:40174-40193 Msa1380790:intron 35.0%
!! CGGACTAGGTTCTTTAATTT+TGG + tig0020408:40214-40233 Msa1380790:intron 35.0%
TGAAAATGAGTCTGATAGGA+TGG - tig0020408:40273-40292 None:intergenic 35.0%
GAGATGAAAATGAGTCTGAT+AGG - tig0020408:40277-40296 None:intergenic 35.0%
! CTTATGCATGGATTGCAATT+GGG - tig0020408:40588-40607 None:intergenic 35.0%
ACTGTTCGTGCACTTATAAT+TGG - tig0020408:40620-40639 None:intergenic 35.0%
AGTGCACGAACAGTATAAAA+TGG + tig0020408:40626-40645 Msa1380790:intron 35.0%
! ATGGAAGAAATAATGGAAGG+CGG + tig0020408:40645-40664 Msa1380790:intron 35.0%
!! TGATGGGTTATTCTTGTATC+AGG - tig0020408:40673-40692 None:intergenic 35.0%
! TGTTGCTGTTCTTTGTTGAT+GGG - tig0020408:40689-40708 None:intergenic 35.0%
! TTGTTGCTGTTCTTTGTTGA+TGG - tig0020408:40690-40709 None:intergenic 35.0%
! ATCTTGAAGCTTTTGTTGAG+AGG - tig0020408:41238-41257 None:intergenic 35.0%
TAATATGGTGTAAGCAGCAT+AGG + tig0020408:41490-41509 Msa1380790:intron 35.0%
ACACATCTATCATCCATCAA+TGG + tig0020408:41580-41599 Msa1380790:exon 35.0%
GAATGTGATTTGAGTCTTTG+AGG + tig0020408:41815-41834 Msa1380790:intron 35.0%
! CATGATTGTAATCCCCTTTT+GGG + tig0020408:41870-41889 Msa1380790:intron 35.0%
TCATTTCTTACAACCGTGTT+CGG + tig0020408:42232-42251 Msa1380790:intron 35.0%
CGCTACCTTCTTGAATAAAA+AGG - tig0020408:42412-42431 None:intergenic 35.0%
CTTATCACAATTGCAAGCAA+AGG - tig0020408:42560-42579 None:intergenic 35.0%
CTTTGCTTGCAATTGTGATA+AGG + tig0020408:42558-42577 Msa1380790:intron 35.0%
TATGCATCAACAGAGGAATA+TGG - tig0020408:42760-42779 None:intergenic 35.0%
CAGATTCATGTAACATCACT+AGG - tig0020408:42957-42976 None:intergenic 35.0%
!! TCAAGAGATTTTAAAAGGGG+CGG + tig0020408:43040-43059 Msa1380790:CDS 35.0%
AGTTCCCTAAAGAGAAAATG+TGG - tig0020408:43132-43151 None:intergenic 35.0%
! TGCAATCATTCGAAAAGCAT+TGG + tig0020408:43266-43285 Msa1380790:intron 35.0%
!! GCAATCATTCGAAAAGCATT+GGG + tig0020408:43267-43286 Msa1380790:intron 35.0%
ATAATTGGCACATCACTCTT+TGG - tig0020408:31558-31577 None:intergenic 35.0%
AACAAAACTGAGTGAGATTC+GGG - tig0020408:31785-31804 None:intergenic 35.0%
AAAATCAATCAGGGCCTATT+TGG - tig0020408:43910-43929 None:intergenic 35.0%
! TTTGAGATGGAGAGCATAAA+GGG + tig0020408:44026-44045 Msa1380790:CDS 35.0%
ACAACACGCTTTATGTATAG+AGG - tig0020408:32340-32359 None:intergenic 35.0%
! GTTTTCATTGAGATCACAGT+AGG + tig0020408:44389-44408 Msa1380790:three_prime_UTR 35.0%
AGCGCATCAGGTGTAATAAT+TGG - tig0020408:31573-31592 None:intergenic 40.0%
CCATCATTCCAAATCTTGTC+GGG - tig0020408:31626-31645 None:intergenic 40.0%
GCCATCATTCCAAATCTTGT+CGG - tig0020408:31627-31646 None:intergenic 40.0%
! AAAGCATTCTTGGATGCAAC+TGG + tig0020408:31657-31676 Msa1380790:intron 40.0%
! TTTTACAGCACTGCTTCTCA+AGG + tig0020408:31726-31745 Msa1380790:intron 40.0%
GCACCAAATGTGTAACCAAT+GGG - tig0020408:32147-32166 None:intergenic 40.0%
AGCACCAAATGTGTAACCAA+TGG - tig0020408:32148-32167 None:intergenic 40.0%
!! ATTGGTTACACATTTGGTGC+TGG + tig0020408:32147-32166 Msa1380790:intron 40.0%
CTTTCTCCTGAGCAAATAAC+GGG - tig0020408:32819-32838 None:intergenic 40.0%
TGTTAAGGTCACTTCATTGG+AGG - tig0020408:32891-32910 None:intergenic 40.0%
! TTAAGAAGAGAAGCATGGCA+GGG + tig0020408:33082-33101 Msa1380790:intron 40.0%
TGCTTATAAATGTGACCGGA+GGG - tig0020408:33207-33226 None:intergenic 40.0%
TTGCTTATAAATGTGACCGG+AGG - tig0020408:33208-33227 None:intergenic 40.0%
! TAAAGGTGTGCTACATAGGA+AGG + tig0020408:33411-33430 Msa1380790:intron 40.0%
! GATGTATGTGAAGTGCTATG+TGG + tig0020408:33456-33475 Msa1380790:intron 40.0%
TGGTACGTATAGAGAAAGTC+TGG + tig0020408:33521-33540 Msa1380790:intron 40.0%
!! ATATTGAGTGAGGTTTGGTG+TGG - tig0020408:33976-33995 None:intergenic 40.0%
TATTAGGATTCACCTTGGCT+AGG + tig0020408:34143-34162 Msa1380790:intron 40.0%
!! GGTGGATTATCCATCTATGA+CGG + tig0020408:34164-34183 Msa1380790:intron 40.0%
! GTGGATTATCCATCTATGAC+GGG + tig0020408:34165-34184 Msa1380790:intron 40.0%
CAGTGAGCTTCCAAAAAATG+GGG - tig0020408:34439-34458 None:intergenic 40.0%
CTCAGTGAGCTTCCAAAAAA+TGG - tig0020408:34441-34460 None:intergenic 40.0%
GCCCTCAACCTTTATACATT+TGG + tig0020408:34868-34887 Msa1380790:intron 40.0%
!! TACATCGCCAAATAATGGGT+AGG + tig0020408:34911-34930 Msa1380790:intron 40.0%
ATGGGTAGGACAACTAGAAA+TGG + tig0020408:34925-34944 Msa1380790:intron 40.0%
TTTGCATTAGATCCACCAGT+TGG - tig0020408:35153-35172 None:intergenic 40.0%
! CTGGTGGATCTAATGCAAAA+TGG + tig0020408:35154-35173 Msa1380790:intron 40.0%
TCATTTGCAACAGCTTTCAC+AGG + tig0020408:35185-35204 Msa1380790:intron 40.0%
GAAAAAATTGTGAGGCTGCA+AGG - tig0020408:35837-35856 None:intergenic 40.0%
TCATCAATAACATGGGGGAT+AGG + tig0020408:36202-36221 Msa1380790:intron 40.0%
TTGTGATATAAATGTGGGGG+AGG - tig0020408:36476-36495 None:intergenic 40.0%
! CTTTTCCACTTCTCTGAACA+GGG - tig0020408:36572-36591 None:intergenic 40.0%
ATGTTGCATTTATACCTGCC+AGG + tig0020408:36601-36620 Msa1380790:intron 40.0%
GGAAGATGTTTGGAAGAAAC+CGG - tig0020408:36629-36648 None:intergenic 40.0%
TGAGACAAGAGGAAGATGTT+TGG - tig0020408:36639-36658 None:intergenic 40.0%
ACATCTTCCTCTTGTCTCAA+AGG + tig0020408:36640-36659 Msa1380790:intron 40.0%
TGCTGCTGGATCTAATTCTT+TGG + tig0020408:36692-36711 Msa1380790:intron 40.0%
GCTGCTGGATCTAATTCTTT+GGG + tig0020408:36693-36712 Msa1380790:intron 40.0%
CAACAATTATGTGGTGCCTT+TGG - tig0020408:36813-36832 None:intergenic 40.0%
AGCTGATGGCAACAATTATG+TGG - tig0020408:36822-36841 None:intergenic 40.0%
! ATGGCGGAATGCGAATTTAT+GGG - tig0020408:36932-36951 None:intergenic 40.0%
! TATGGCGGAATGCGAATTTA+TGG - tig0020408:36933-36952 None:intergenic 40.0%
CGCCATACTTGAACAACTTT+AGG + tig0020408:36946-36965 Msa1380790:intron 40.0%
CGTGCTCGGTTAAATAGTAA+AGG - tig0020408:37045-37064 None:intergenic 40.0%
!!! GCACTTTTAGCTTCCAAATG+AGG + tig0020408:37118-37137 Msa1380790:intron 40.0%
GCTTCCAAATGAGGTTTCAT+CGG + tig0020408:37127-37146 Msa1380790:intron 40.0%
GGGGTCAATATACCTTTCTT+AGG - tig0020408:37453-37472 None:intergenic 40.0%
GACATAACCCAAGCTATGTT+TGG - tig0020408:37536-37555 None:intergenic 40.0%
CAAGACTGCTAGAATCAGTT+TGG + tig0020408:37616-37635 Msa1380790:intron 40.0%
CTATGTTAGGAAAACAGGGA+TGG - tig0020408:37647-37666 None:intergenic 40.0%
GTGGCTATGTTAGGAAAACA+GGG - tig0020408:37651-37670 None:intergenic 40.0%
TGTGGCTATGTTAGGAAAAC+AGG - tig0020408:37652-37671 None:intergenic 40.0%
!! TTTTGGTGGTATGGGCTTTA+AGG - tig0020408:37691-37710 None:intergenic 40.0%
CGGATTACATTGGATGTCTT+GGG - tig0020408:37736-37755 None:intergenic 40.0%
ATGGGCACAGACAAATATCT+CGG - tig0020408:38034-38053 None:intergenic 40.0%
! TTTCAGGGCTGATGATAATG+AGG - tig0020408:38203-38222 None:intergenic 40.0%
AACAAGAGGTGAGAAATAGC+AGG + tig0020408:38244-38263 Msa1380790:intron 40.0%
TAGTACAAATAGACACGCCA+TGG + tig0020408:38272-38291 Msa1380790:intron 40.0%
TTCGTTCTGATTTCCGGATA+AGG + tig0020408:38305-38324 Msa1380790:intron 40.0%
TCGTTCTGATTTCCGGATAA+GGG + tig0020408:38306-38325 Msa1380790:intron 40.0%
AAACCTCTACCTGGTATGAT+CGG + tig0020408:38388-38407 Msa1380790:intron 40.0%
! GTCTTTTGCTCATTACCTCT+AGG + tig0020408:38787-38806 Msa1380790:intron 40.0%
TTTGTTGAGTTTAGTGACGG+TGG + tig0020408:38823-38842 Msa1380790:intron 40.0%
CTTTCAGGCTGAAGAGTTTA+AGG - tig0020408:38985-39004 None:intergenic 40.0%
CTTAAACTCTTCAGCCTGAA+AGG + tig0020408:38983-39002 Msa1380790:intron 40.0%
TTATGTCTACAACCAGTGCA+CGG + tig0020408:39051-39070 Msa1380790:intron 40.0%
ATTGCTGATGAACAAGGCAT+GGG - tig0020408:39128-39147 None:intergenic 40.0%
AATTGCTGATGAACAAGGCA+TGG - tig0020408:39129-39148 None:intergenic 40.0%
GTACGAATTGCTGATGAACA+AGG - tig0020408:39134-39153 None:intergenic 40.0%
TTCAGTCACGTCAAGAAAGA+AGG - tig0020408:39192-39211 None:intergenic 40.0%
AAGACACATTGGTATCGTGA+TGG - tig0020408:39242-39261 None:intergenic 40.0%
CTAGCATGTTGACAAACTTG+CGG - tig0020408:39319-39338 None:intergenic 40.0%
TGGAGCAAAGCACATAACAA+TGG - tig0020408:39413-39432 None:intergenic 40.0%
AGAGGATAATGATCTGATGC+CGG + tig0020408:39608-39627 Msa1380790:intron 40.0%
TGAAAGGTTATCCGTGTACA+TGG - tig0020408:39745-39764 None:intergenic 40.0%
!! GGTGGCTTATTAATGGGTTT+AGG - tig0020408:39805-39824 None:intergenic 40.0%
AACCCATTAATAAGCCACCT+AGG + tig0020408:39806-39825 Msa1380790:intron 40.0%
GTCCTAGGTGGCTTATTAAT+GGG - tig0020408:39811-39830 None:intergenic 40.0%
! GTTTTCCTGAAGGTAGAAGA+AGG - tig0020408:39949-39968 None:intergenic 40.0%
! GGATATTACGGTTTTCCTGA+AGG - tig0020408:39959-39978 None:intergenic 40.0%
GTTAGTAGTAATGGTCGAAG+TGG - tig0020408:40094-40113 None:intergenic 40.0%
CTAACGTCTCACTTAAGAAG+AGG + tig0020408:40173-40192 Msa1380790:intron 40.0%
CCTAGTCCGCTATTATAAGT+CGG - tig0020408:40203-40222 None:intergenic 40.0%
! TGGATTGCAATTGGGCTTTT+TGG - tig0020408:40580-40599 None:intergenic 40.0%
! CCTTATGCATGGATTGCAAT+TGG - tig0020408:40589-40608 None:intergenic 40.0%
CCAATTGCAATCCATGCATA+AGG + tig0020408:40586-40605 Msa1380790:intron 40.0%
TGGTATGTACTCCTTATGCA+TGG - tig0020408:40600-40619 None:intergenic 40.0%
!! ACTCTTTTTCTCTGTCGACT+GGG - tig0020408:40739-40758 None:intergenic 40.0%
!! TGAGGAATTTTGCTGTCGTT+CGG - tig0020408:40822-40841 None:intergenic 40.0%
GACAGCAAAATTCCTCACAA+GGG + tig0020408:40825-40844 Msa1380790:intron 40.0%
ACAGCAAAATTCCTCACAAG+GGG + tig0020408:40826-40845 Msa1380790:intron 40.0%
TGCTTATATTAGTGACCGGA+GGG - tig0020408:41049-41068 None:intergenic 40.0%
TTGCTTATATTAGTGACCGG+AGG - tig0020408:41048-41067 None:intergenic 40.0%
TTGCTTATATTAGTGACCGG+AGG + tig0020408:41048-41067 Msa1380790:intron 40.0%
ACTTTAGTGGTAGCCATTGA+TGG - tig0020408:41596-41615 None:intergenic 40.0%
! GCATGATTGTAATCCCCTTT+TGG + tig0020408:41869-41888 Msa1380790:intron 40.0%
GTAAGCTGTTTATCCGAACA+CGG - tig0020408:42248-42267 None:intergenic 40.0%
CAACCTTCTACTGAAAAGGT+GGG - tig0020408:42453-42472 None:intergenic 40.0%
ACAACCTTCTACTGAAAAGG+TGG - tig0020408:42454-42473 None:intergenic 40.0%
AGTATGCACTCTTGTCTACA+TGG - tig0020408:42492-42511 None:intergenic 40.0%
! TGCATACTTTTGATCGAGTG+TGG + tig0020408:42504-42523 Msa1380790:intron 40.0%
!! CATCACCAATGATGGATGAT+AGG - tig0020408:42531-42550 None:intergenic 40.0%
TACTAGCAGACAAAGCATGA+TGG - tig0020408:42704-42723 None:intergenic 40.0%
ATCAACAGAGGAATATGGTG+TGG - tig0020408:42755-42774 None:intergenic 40.0%
TTCCTCTGTTGATGCATAAG+TGG + tig0020408:42762-42781 Msa1380790:intron 40.0%
TACCACTTATGCATCAACAG+AGG - tig0020408:42767-42786 None:intergenic 40.0%
TCTGTTGATGCATAAGTGGT+AGG + tig0020408:42766-42785 Msa1380790:intron 40.0%
AAGGAGTAGAAGCAAAGCTA+TGG + tig0020408:43072-43091 Msa1380790:CDS 40.0%
TTTCGAATGATTGCAGAGGA+GGG - tig0020408:43261-43280 None:intergenic 40.0%
! TTTTCGAATGATTGCAGAGG+AGG - tig0020408:43262-43281 None:intergenic 40.0%
! TGCTTTTCGAATGATTGCAG+AGG - tig0020408:43265-43284 None:intergenic 40.0%
AGCGCATCAGGTGTAATAAT+TGG - tig0020408:31573-31592 None:intergenic 40.0%
CCATCATTCCAAATCTTGTC+GGG - tig0020408:31626-31645 None:intergenic 40.0%
GCCATCATTCCAAATCTTGT+CGG - tig0020408:31627-31646 None:intergenic 40.0%
! TGCTCAGTTTAAAGCATTCC+TGG + tig0020408:43475-43494 Msa1380790:CDS 40.0%
!!! TTTTACAGCACTGGTTCTCA+AGG + tig0020408:43554-43573 Msa1380790:CDS 40.0%
!!! CTCACTCAGTTTTGTTTCGA+AGG + tig0020408:43612-43631 Msa1380790:intron 40.0%
TGGGCACAAAAATCATTCCA+TGG - tig0020408:43980-43999 None:intergenic 40.0%
! GGAATGATTTTTGTGCCCAT+TGG + tig0020408:43981-44000 Msa1380790:CDS 40.0%
GCACCAAATGTGTAACCAAT+GGG - tig0020408:32147-32166 None:intergenic 40.0%
AGCACCAAATGTGTAACCAA+TGG - tig0020408:32148-32167 None:intergenic 40.0%
!! ATTGGTTACACATTTGGTGC+TGG + tig0020408:32147-32166 Msa1380790:intron 40.0%
! GTTTGAGATGGAGAGCATAA+AGG + tig0020408:44025-44044 Msa1380790:CDS 40.0%
!!! TTTGATCCACGTTTTGGAAG+TGG + tig0020408:44434-44453 Msa1380790:three_prime_UTR 40.0%
ATTGGCACATCACTCTTTGG+AGG - tig0020408:31555-31574 None:intergenic 45.0%
AGCAAAAAACCATCAGCCTC+AGG - tig0020408:31597-31616 None:intergenic 45.0%
!!! GAGGCTGATGGTTTTTTGCT+TGG + tig0020408:31597-31616 Msa1380790:intron 45.0%
! CCCGACAAGATTTGGAATGA+TGG + tig0020408:31623-31642 Msa1380790:intron 45.0%
GTGCTGTAAAAGATTCCTGC+AGG - tig0020408:31717-31736 None:intergenic 45.0%
GAGTGAGATTCGGGAACTAA+CGG - tig0020408:31776-31795 None:intergenic 45.0%
AAAAGCAGTCAGGGCCTATT+TGG - tig0020408:32087-32106 None:intergenic 45.0%
! GTGCCCATTGGTTACACATT+TGG + tig0020408:32141-32160 Msa1380790:intron 45.0%
!! TGGTGCTGGTATGTTTCAGA+TGG + tig0020408:32161-32180 Msa1380790:intron 45.0%
! CAGATGGAGAGTATAAAGGG+TGG + tig0020408:32177-32196 Msa1380790:intron 45.0%
AGCTTGAGCCAATTCCAACT+CGG - tig0020408:32253-32272 None:intergenic 45.0%
! ATTGGCTCAAGCTTTCCATC+AGG + tig0020408:32260-32279 Msa1380790:intron 45.0%
TTGGCTCAAGCTTTCCATCA+GGG + tig0020408:32261-32280 Msa1380790:intron 45.0%
GGCATTGCAAAGAAGCTCAA+AGG + tig0020408:32297-32316 Msa1380790:intron 45.0%
TAAGGTCACTTCATTGGAGG+AGG - tig0020408:32888-32907 None:intergenic 45.0%
! GTTAAGAAGAGAAGCATGGC+AGG + tig0020408:33081-33100 Msa1380790:intron 45.0%
GACAGCACTTGTGTACCATT+GGG + tig0020408:33361-33380 Msa1380790:intron 45.0%
!!! TGGTGAGTTTTGGACGTGAT+GGG - tig0020408:33956-33975 None:intergenic 45.0%
!!! AGGTTTGGTGTGGTGAGTTT+TGG - tig0020408:33966-33985 None:intergenic 45.0%
ATGGATAATCCACCTAGCCA+AGG - tig0020408:34158-34177 None:intergenic 45.0%
CTTATACGTCCCGTCATAGA+TGG - tig0020408:34177-34196 None:intergenic 45.0%
! CTATGACGGGACGTATAAGA+AGG + tig0020408:34178-34197 Msa1380790:intron 45.0%
AATGTCCCGGTACATATGAC+AGG - tig0020408:35465-35484 None:intergenic 45.0%
GTAACGTCCACAAACTAACG+AGG + tig0020408:35530-35549 Msa1380790:intron 45.0%
ATGGGGGATAGGATTAGACA+GGG + tig0020408:36213-36232 Msa1380790:intron 45.0%
CTCATATTGAGTTCAGCAGG+AGG - tig0020408:36276-36295 None:intergenic 45.0%
GCTCTCATATTGAGTTCAGC+AGG - tig0020408:36279-36298 None:intergenic 45.0%
!! GACTACACACAGCTTTGGAT+TGG - tig0020408:36447-36466 None:intergenic 45.0%
TGTTGGACTACACACAGCTT+TGG - tig0020408:36452-36471 None:intergenic 45.0%
!! TCTCTGAACAGGGTTGGTTT+GGG - tig0020408:36562-36581 None:intergenic 45.0%
!! TTCTCTGAACAGGGTTGGTT+TGG - tig0020408:36563-36582 None:intergenic 45.0%
! CCTTTTCCACTTCTCTGAAC+AGG - tig0020408:36573-36592 None:intergenic 45.0%
CCTGTTCAGAGAAGTGGAAA+AGG + tig0020408:36570-36589 Msa1380790:intron 45.0%
!! GGTTCAACCTTTGAGACAAG+AGG - tig0020408:36650-36669 None:intergenic 45.0%
TGTCTCAAAGGTTGAACCTG+CGG + tig0020408:36652-36671 Msa1380790:intron 45.0%
TACTCAATCCATAACTCCGC+AGG - tig0020408:36671-36690 None:intergenic 45.0%
! TATGGATTGAGTACTGCTGC+TGG + tig0020408:36678-36697 Msa1380790:intron 45.0%
ATGTTGAAACACCTGCGAGT+CGG + tig0020408:36747-36766 Msa1380790:intron 45.0%
CTATTTAACCGAGCACGTGT+TGG + tig0020408:37048-37067 Msa1380790:intron 45.0%
!! GTTGTTTTCCAACACGTGCT+CGG - tig0020408:37059-37078 None:intergenic 45.0%
ATGGCCGATGAAACCTCATT+TGG - tig0020408:37134-37153 None:intergenic 45.0%
ATTTGGAAAGGGGAAAGGAG+TGG - tig0020408:37228-37247 None:intergenic 45.0%
TCCAATACAAGTGGCTGCAA+CGG + tig0020408:37258-37277 Msa1380790:intron 45.0%
ATGCTTCGCCAAACATAGCT+TGG + tig0020408:37525-37544 Msa1380790:intron 45.0%
TGCTTCGCCAAACATAGCTT+GGG + tig0020408:37526-37545 Msa1380790:intron 45.0%
TGTTAGGAAAACAGGGATGG+AGG - tig0020408:37644-37663 None:intergenic 45.0%
! GCGGATTACATTGGATGTCT+TGG - tig0020408:37737-37756 None:intergenic 45.0%
! ATATGCGTCGCGGATTACAT+TGG - tig0020408:37746-37765 None:intergenic 45.0%
AGAAGCAAAGAGGCGACATT+TGG - tig0020408:37992-38011 None:intergenic 45.0%
! TATGGTGGGAAGAAGCAAAG+AGG - tig0020408:38002-38021 None:intergenic 45.0%
TTGCTTCTTCCCACCATAGA+CGG + tig0020408:38004-38023 Msa1380790:intron 45.0%
CTGAAGAAAACCTCGGACTT+TGG + tig0020408:38115-38134 Msa1380790:intron 45.0%
AGAAAACCTCGGACTTTGGA+AGG + tig0020408:38119-38138 Msa1380790:intron 45.0%
! TTATGAACTAGCTTCAGGGC+AGG - tig0020408:38152-38171 None:intergenic 45.0%
AGCAGTCATTGGCAAACAAG+AGG + tig0020408:38230-38249 Msa1380790:intron 45.0%
TACAAATAGACACGCCATGG+AGG + tig0020408:38275-38294 Msa1380790:intron 45.0%
CTCCACTTCGTTCTGATTTC+CGG + tig0020408:38299-38318 Msa1380790:intron 45.0%
ATCCGGAAATCAGAACGAAG+TGG - tig0020408:38304-38323 None:intergenic 45.0%
TTCTGATTTCCGGATAAGGG+AGG + tig0020408:38309-38328 Msa1380790:intron 45.0%
AAGGCTTATCCTCCCTTATC+CGG - tig0020408:38321-38340 None:intergenic 45.0%
TCTTGTCTCAAACCTCTACC+TGG + tig0020408:38379-38398 Msa1380790:intron 45.0%
AAGCCCGGATTAAATCCATC+CGG + tig0020408:38921-38940 Msa1380790:intron 45.0%
! TGGTCCGGATGGATTTAATC+CGG - tig0020408:38928-38947 None:intergenic 45.0%
ATGCATCCAGATAAGTGTCC+TGG - tig0020408:38948-38967 None:intergenic 45.0%
TATGTCTACAACCAGTGCAC+GGG + tig0020408:39052-39071 Msa1380790:intron 45.0%
GGCAACAAGCTAAGACACAT+TGG - tig0020408:39253-39272 None:intergenic 45.0%
GTGCTTTGCTCCATGAATTG+AGG + tig0020408:39420-39439 Msa1380790:intron 45.0%
GTGCGAATGACCTCAATTCA+TGG - tig0020408:39433-39452 None:intergenic 45.0%
TTTGTCTAGGCACCCAAACA+CGG + tig0020408:39561-39580 Msa1380790:intron 45.0%
! GAGCACTTGCTAATGCAGAT+TGG - tig0020408:39676-39695 None:intergenic 45.0%
CGTCCTAGGTGGCTTATTAA+TGG - tig0020408:39812-39831 None:intergenic 45.0%
CAAACAACACCTCACTTCCA+AGG - tig0020408:39895-39914 None:intergenic 45.0%
!! GAAGTGAGGTGTTGTTTGCA+AGG + tig0020408:39897-39916 Msa1380790:intron 45.0%
! TAGAAGAAGGCGTGCTTCAT+GGG - tig0020408:39936-39955 None:intergenic 45.0%
AGTAGTAATGGTCGAAGTGG+TGG - tig0020408:40091-40110 None:intergenic 45.0%
!! CCGACTTATAATAGCGGACT+AGG + tig0020408:40200-40219 Msa1380790:intron 45.0%
! GACTCTTTTTCTCTGTCGAC+TGG - tig0020408:40740-40759 None:intergenic 45.0%
TAGGAGATATCGCAAGACAG+AGG + tig0020408:40768-40787 Msa1380790:intron 45.0%
CGACAGCAAAATTCCTCACA+AGG + tig0020408:40824-40843 Msa1380790:intron 45.0%
AAAATTCCTCACAAGGGGAG+CGG + tig0020408:40831-40850 Msa1380790:intron 45.0%
ACTAATCCTCCAATCACCAG+CGG + tig0020408:41306-41325 Msa1380790:intron 45.0%
AAAATCAGATACTTCGCCGC+TGG - tig0020408:41325-41344 None:intergenic 45.0%
! AGACCCACCTTTTCAGTAGA+AGG + tig0020408:42447-42466 Msa1380790:intron 45.0%
GTGGTCCTATCATCCATCAT+TGG + tig0020408:42523-42542 Msa1380790:intron 45.0%
GGAAGAGTCATCACCAATGA+TGG - tig0020408:42539-42558 None:intergenic 45.0%
CTTTGCTTCTACTCCTTCCA+CGG - tig0020408:43069-43088 None:intergenic 45.0%
AGTAGAAGCAAAGCTATGGC+AGG + tig0020408:43076-43095 Msa1380790:CDS 45.0%
! TTGCAGAGGAGGGTATAACT+TGG - tig0020408:43251-43270 None:intergenic 45.0%
ATTGGCACATCACTCTTTGG+AGG - tig0020408:31555-31574 None:intergenic 45.0%
! CCCGACAAGATTTGGAATGA+TGG + tig0020408:31623-31642 Msa1380790:intron 45.0%
! AAAGCATTCCTGGATGCAAC+TGG + tig0020408:43485-43504 Msa1380790:CDS 45.0%
GTGCTGTAAAAGATTCCTGC+AGG - tig0020408:31717-31736 None:intergenic 45.0%
! GCAGGAATCTTTTACAGCAC+TGG + tig0020408:31717-31736 Msa1380790:intron 45.0%
GAGTGAGATTCGGGAACTTA+CGG - tig0020408:43599-43618 None:intergenic 45.0%
! GTGCCCATTGGTTACACATT+TGG + tig0020408:32141-32160 Msa1380790:intron 45.0%
!! TGGTGCTGGTATGTTTGAGA+TGG + tig0020408:44013-44032 Msa1380790:CDS 45.0%
ATAAAGGGTGGTTCCCCATA+TGG + tig0020408:44041-44060 Msa1380790:CDS 45.0%
AGCTTGAGCCAATTCCAACT+CGG - tig0020408:32253-32272 None:intergenic 45.0%
! ATTGGCTCAAGCTTTCCATC+AGG + tig0020408:32260-32279 Msa1380790:intron 45.0%
TTGGCTCAAGCTTTCCATCA+GGG + tig0020408:32261-32280 Msa1380790:intron 45.0%
GGCATTGCAAAGAAGCTCAA+AGG + tig0020408:32297-32316 Msa1380790:intron 45.0%
CAGTAGGCACAAGAAGCAAT+TGG + tig0020408:44405-44424 Msa1380790:three_prime_UTR 45.0%
!!! TGCTGCTTTGATCCACGTTT+TGG + tig0020408:44428-44447 Msa1380790:three_prime_UTR 45.0%
ACATCACCACTTCCAAAACG+TGG - tig0020408:44443-44462 None:intergenic 45.0%
!!! AAAAGAAAATATATTTTTTT+TGG + tig0020408:40411-40430 Msa1380790:intron 5.0%
!!! ACTTATTTTAATTTATATAT+TGG - tig0020408:43883-43902 None:intergenic 5.0%
CTTGGCTTCCCGACAAGATT+TGG + tig0020408:31615-31634 Msa1380790:intron 50.0%
GCATTCTTGGATGCAACTGG+TGG + tig0020408:31660-31679 Msa1380790:intron 50.0%
TACAGCACTGCTTCTCAAGG+AGG + tig0020408:31729-31748 Msa1380790:intron 50.0%
ATAAAGGGTGGTTCCCCGTA+TGG + tig0020408:32189-32208 Msa1380790:intron 50.0%
! ACAGCCTACCGAGTTGGAAT+TGG + tig0020408:32242-32261 Msa1380790:intron 50.0%
TGAGCCAATTCCAACTCGGT+AGG - tig0020408:32249-32268 None:intergenic 50.0%
TGGCTCAAGCTTTCCATCAG+GGG + tig0020408:32262-32281 Msa1380790:intron 50.0%
CAGCAAAATGCTTCCCCTGA+TGG - tig0020408:32278-32297 None:intergenic 50.0%
!!! CATCAGGGGAAGCATTTTGC+TGG + tig0020408:32276-32295 Msa1380790:intron 50.0%
GTGAGACCCGTTATTTGCTC+AGG + tig0020408:32810-32829 Msa1380790:intron 50.0%
CCTACTCGTTATACTCCCTC+TGG - tig0020408:33342-33361 None:intergenic 50.0%
! CCAGAGGGAGTATAACGAGT+AGG + tig0020408:33339-33358 Msa1380790:intron 50.0%
GGACAGCACTTGTGTACCAT+TGG + tig0020408:33360-33379 Msa1380790:intron 50.0%
! ACTTGGTGGTTTGGGGTCTT+TGG + tig0020408:33871-33890 Msa1380790:intron 50.0%
!!! GTGGTGAGTTTTGGACGTGA+TGG - tig0020408:33957-33976 None:intergenic 50.0%
TAGGATTCACCTTGGCTAGG+TGG + tig0020408:34146-34165 Msa1380790:intron 50.0%
GAGCATGTTACAAGGCCAAC+TGG + tig0020408:35135-35154 Msa1380790:intron 50.0%
CATGTTACAAGGCCAACTGG+TGG + tig0020408:35138-35157 Msa1380790:intron 50.0%
GTTTGTGGACGTTACACCGA+TGG - tig0020408:35525-35544 None:intergenic 50.0%
GTGCATGATTCACCACTCCT+TGG + tig0020408:35789-35808 Msa1380790:intron 50.0%
! TTGGTTGGTGCAAGCTTCCA+AGG - tig0020408:35809-35828 None:intergenic 50.0%
GGCTGCAAGGTTTGATTGGT+TGG - tig0020408:35824-35843 None:intergenic 50.0%
GTGAGGCTGCAAGGTTTGAT+TGG - tig0020408:35828-35847 None:intergenic 50.0%
CATGGGGGATAGGATTAGAC+AGG + tig0020408:36212-36231 Msa1380790:intron 50.0%
CAGCAGGAGGCAAGCAAATA+GGG - tig0020408:36263-36282 None:intergenic 50.0%
TCAGCAGGAGGCAAGCAAAT+AGG - tig0020408:36264-36283 None:intergenic 50.0%
ATAAATGTGGGGGAGGCTGT+TGG - tig0020408:36469-36488 None:intergenic 50.0%
ACCAACCCTGTTCAGAGAAG+TGG + tig0020408:36564-36583 Msa1380790:intron 50.0%
TCCACTTCTCTGAACAGGGT+TGG - tig0020408:36568-36587 None:intergenic 50.0%
CATTTATACCTGCCAGGTGC+CGG + tig0020408:36607-36626 Msa1380790:intron 50.0%
AGGTTGAACCTGCGGAGTTA+TGG + tig0020408:36660-36679 Msa1380790:intron 50.0%
TTTCTTTGGCGAGTGTGTCG+TGG - tig0020408:37081-37100 None:intergenic 50.0%
GTTGCAGCCACTTGTATTGG+AGG - tig0020408:37259-37278 None:intergenic 50.0%
ACCGTTGCAGCCACTTGTAT+TGG - tig0020408:37262-37281 None:intergenic 50.0%
ACAAGCCATCCTTGAGCCAA+GGG + tig0020408:37424-37443 Msa1380790:intron 50.0%
TAAAACAGGGTGCACGATGG+CGG - tig0020408:37485-37504 None:intergenic 50.0%
TGGTAAAACAGGGTGCACGA+TGG - tig0020408:37488-37507 None:intergenic 50.0%
CATGGTGGTAATATGCGTCG+CGG - tig0020408:37756-37775 None:intergenic 50.0%
!! AATGCTTTTTGGTGGGGCCA+TGG - tig0020408:37774-37793 None:intergenic 50.0%
AGCAAGTGTTTGTCCAAGGC+TGG - tig0020408:37926-37945 None:intergenic 50.0%
GAGCAGCAAGTGTTTGTCCA+AGG - tig0020408:37930-37949 None:intergenic 50.0%
TTCTTCCCACCATAGACGGA+AGG + tig0020408:38008-38027 Msa1380790:intron 50.0%
ATATCTCGGCCTTCCGTCTA+TGG - tig0020408:38020-38039 None:intergenic 50.0%
!! CATTAGCCTTCCAAAGTCCG+AGG - tig0020408:38128-38147 None:intergenic 50.0%
! CTCGGACTTTGGAAGGCTAA+TGG + tig0020408:38126-38145 Msa1380790:intron 50.0%
TTGGTAGGTCCGATCATACC+AGG - tig0020408:38400-38419 None:intergenic 50.0%
! GGTCCGGATGGATTTAATCC+GGG - tig0020408:38927-38946 None:intergenic 50.0%
GGATTAAATCCATCCGGACC+AGG + tig0020408:38927-38946 Msa1380790:intron 50.0%
TCCAGATAAGTGTCCTGGTC+CGG - tig0020408:38943-38962 None:intergenic 50.0%
GAGTAATAGTACCCGTGCAC+TGG - tig0020408:39066-39085 None:intergenic 50.0%
TGATGAACAAGGCATGGGTC+AGG - tig0020408:39123-39142 None:intergenic 50.0%
TTGTAGGAGGCAAGGAGTTG+CGG - tig0020408:39348-39367 None:intergenic 50.0%
CAACTCCTTGCCTCCTACAA+CGG + tig0020408:39348-39367 Msa1380790:intron 50.0%
TTGAACCGTTGTAGGAGGCA+AGG - tig0020408:39356-39375 None:intergenic 50.0%
ATCTAGTGCAGGTATGCAGG+TGG - tig0020408:39474-39493 None:intergenic 50.0%
GTCATCTAGTGCAGGTATGC+AGG - tig0020408:39477-39496 None:intergenic 50.0%
GATAGCTGGTCATCTAGTGC+AGG - tig0020408:39485-39504 None:intergenic 50.0%
GGAGGAAACTCACCGTGTTT+GGG - tig0020408:39576-39595 None:intergenic 50.0%
AGGAGGAAACTCACCGTGTT+TGG - tig0020408:39577-39596 None:intergenic 50.0%
AGCTTGACCTCAACAGCTCT+AGG + tig0020408:39701-39720 Msa1380790:intron 50.0%
GGTAAGCAGTGTCTGATGCA+GGG - tig0020408:39784-39803 None:intergenic 50.0%
AGGTAAGCAGTGTCTGATGC+AGG - tig0020408:39785-39804 None:intergenic 50.0%
! GTAGAAGAAGGCGTGCTTCA+TGG - tig0020408:39937-39956 None:intergenic 50.0%
!! GTGGCTTAGCACTGTTTTGG+CGG - tig0020408:40072-40091 None:intergenic 50.0%
! GTGGTGGCTTAGCACTGTTT+TGG - tig0020408:40075-40094 None:intergenic 50.0%
GGGCGTCCGACTTATAATAG+CGG + tig0020408:40194-40213 Msa1380790:intron 50.0%
AAGACAGAGGCAAAACGTCC+AGG + tig0020408:40781-40800 Msa1380790:intron 50.0%
AGACAGAGGCAAAACGTCCA+GGG + tig0020408:40782-40801 Msa1380790:intron 50.0%
GGAGTAAGATGTACACCCTC+CGG + tig0020408:40935-40954 Msa1380790:intron 50.0%
GGTGGATGAGAACGTTGACA+GGG - tig0020408:41518-41537 None:intergenic 50.0%
! TGGTGGATGAGAACGTTGAC+AGG - tig0020408:41519-41538 None:intergenic 50.0%
GAAGCAAAGCTATGGCAGGT+TGG + tig0020408:43080-43099 Msa1380790:intron 50.0%
AGCAACAAACCATCAGCCTC+AGG - tig0020408:43425-43444 None:intergenic 50.0%
!! GAGGCTGATGGTTTGTTGCT+TGG + tig0020408:43425-43444 Msa1380790:CDS 50.0%
CTTGGCTTCCCGACAAGATT+TGG + tig0020408:31615-31634 Msa1380790:intron 50.0%
!! TACAGCACTGGTTCTCAAGG+AGG + tig0020408:43557-43576 Msa1380790:CDS 50.0%
ATGGTGAGCAAGCTGAGTGA+TGG - tig0020408:43961-43980 None:intergenic 50.0%
! ATCACTCAGCTTGCTCACCA+TGG + tig0020408:43960-43979 Msa1380790:CDS 50.0%
! GAGATGGAGAGCATAAAGGG+TGG + tig0020408:44029-44048 Msa1380790:CDS 50.0%
GAAGGTTCCCGAACCATATG+GGG - tig0020408:44057-44076 None:intergenic 50.0%
CGAAGGTTCCCGAACCATAT+GGG - tig0020408:44058-44077 None:intergenic 50.0%
! ACAGCCTACCGAGTTGGAAT+TGG + tig0020408:32242-32261 Msa1380790:intron 50.0%
TGAGCCAATTCCAACTCGGT+AGG - tig0020408:32249-32268 None:intergenic 50.0%
TGGCTCAAGCTTTCCATCAG+GGG + tig0020408:32262-32281 Msa1380790:intron 50.0%
! CAGCAAAGTACTTCCCCTGA+TGG - tig0020408:44130-44149 None:intergenic 50.0%
!! CATCAGGGGAAGTACTTTGC+TGG + tig0020408:44128-44147 Msa1380790:CDS 50.0%
TACACCTGATGCGCTACCTG+AGG + tig0020408:31578-31597 Msa1380790:intron 55.0%
TGGATGCAACTGGTGGCCTA+TGG + tig0020408:31667-31686 Msa1380790:intron 55.0%
CAAGTGCCTGAGTACGCCAT+AGG - tig0020408:31686-31705 None:intergenic 55.0%
AGCACTGCTTCTCAAGGAGG+AGG + tig0020408:31732-31751 Msa1380790:intron 55.0%
GTAGGTTCCGGAACCATACG+GGG - tig0020408:32205-32224 None:intergenic 55.0%
CGTAGGTTCCGGAACCATAC+GGG - tig0020408:32206-32225 None:intergenic 55.0%
GCGTAGGTTCCGGAACCATA+CGG - tig0020408:32207-32226 None:intergenic 55.0%
TATGGTTCCGGAACCTACGC+TGG + tig0020408:32207-32226 Msa1380790:intron 55.0%
TGGTGCAAGCTTCCAAGGAG+TGG - tig0020408:35804-35823 None:intergenic 55.0%
GGTAGCTCACGAGTTAGCTC+AGG - tig0020408:36242-36261 None:intergenic 55.0%
GTTTGGAAGAAACCGGCACC+TGG - tig0020408:36622-36641 None:intergenic 55.0%
TCCAGGGCAATGTGAGCTGA+TGG - tig0020408:36836-36855 None:intergenic 55.0%
GACAAGCCATCCTTGAGCCA+AGG + tig0020408:37423-37442 Msa1380790:intron 55.0%
CAAGCCATCCTTGAGCCAAG+GGG + tig0020408:37425-37444 Msa1380790:intron 55.0%
TACCTTTCTTAGGCGCCCCT+TGG - tig0020408:37443-37462 None:intergenic 55.0%
!! ACGATGGCGGATTGGTTCTG+GGG - tig0020408:37472-37491 None:intergenic 55.0%
!! CACGATGGCGGATTGGTTCT+GGG - tig0020408:37473-37492 None:intergenic 55.0%
CGCGACGCATATTACCACCA+TGG + tig0020408:37754-37773 Msa1380790:intron 55.0%
CATTACCTCTCGACCAGCCT+TGG + tig0020408:37910-37929 Msa1380790:intron 55.0%
! TTTGTCCAAGGCTGGTCGAG+AGG - tig0020408:37918-37937 None:intergenic 55.0%
TTAGGTGTCAGGGCGGTGAT+GGG - tig0020408:38052-38071 None:intergenic 55.0%
ATTAGGTGTCAGGGCGGTGA+TGG - tig0020408:38053-38072 None:intergenic 55.0%
GAACGAAGTGGAGACCTCCA+TGG - tig0020408:38292-38311 None:intergenic 55.0%
GGTCCGATCATACCAGGTAG+AGG - tig0020408:38394-38413 None:intergenic 55.0%
GATAAGTGTCCTGGTCCGGA+TGG - tig0020408:38939-38958 None:intergenic 55.0%
TCCGGACCAGGACACTTATC+TGG + tig0020408:38939-38958 Msa1380790:intron 55.0%
CTCTTCAGCCTGAAAGGGAG+CGG + tig0020408:38989-39008 Msa1380790:intron 55.0%
TCTTCAGCCTGAAAGGGAGC+GGG + tig0020408:38990-39009 Msa1380790:intron 55.0%
TATGCTACCCGCTCCCTTTC+AGG - tig0020408:39000-39019 None:intergenic 55.0%
GCGACTTGAACCGTTGTAGG+AGG - tig0020408:39361-39380 None:intergenic 55.0%
GTCGCGACTTGAACCGTTGT+AGG - tig0020408:39364-39383 None:intergenic 55.0%
TAGTGCAGGTATGCAGGTGG+TGG - tig0020408:39471-39490 None:intergenic 55.0%
AATGCATGGTGTGTGGCACC+AGG - tig0020408:39527-39546 None:intergenic 55.0%
TAGCACCCCCCATCTTCTCA+CGG + tig0020408:39834-39853 Msa1380790:intron 55.0%
TGGATGCCCGTGAGAAGATG+GGG - tig0020408:39844-39863 None:intergenic 55.0%
CTGGATGCCCGTGAGAAGAT+GGG - tig0020408:39845-39864 None:intergenic 55.0%
TCTGGATGCCCGTGAGAAGA+TGG - tig0020408:39846-39865 None:intergenic 55.0%
GCACGCCTTCTTCTACCTTC+AGG + tig0020408:39941-39960 Msa1380790:intron 55.0%
! CGTTCAGGTTCCCTAAGCCT+CGG + tig0020408:40242-40261 Msa1380790:intron 55.0%
GATGGAACTGCCGAGGCTTA+GGG - tig0020408:40255-40274 None:intergenic 55.0%
CTGATAGGATGGAACTGCCG+AGG - tig0020408:40262-40281 None:intergenic 55.0%
GACAGAGGCAAAACGTCCAG+GGG + tig0020408:40783-40802 Msa1380790:intron 55.0%
CGGTGAGAATTCTTCTCCCC+TGG - tig0020408:40802-40821 None:intergenic 55.0%
AAAAACTGCCGCCGCTCCTA+GGG - tig0020408:40866-40885 None:intergenic 55.0%
GATACTTCGCCGCTGGTGAT+TGG - tig0020408:41318-41337 None:intergenic 55.0%
TGCTTCTACTCCTTCCACGG+AGG - tig0020408:43066-43085 None:intergenic 55.0%
GGTACCTGAAACTCTGCCTG+CGG + tig0020408:43334-43353 Msa1380790:intron 55.0%
TACACCTGATGCGCTACCTG+AGG + tig0020408:31578-31597 Msa1380790:intron 55.0%
GCATTCCTGGATGCAACTGG+TGG + tig0020408:43488-43507 Msa1380790:CDS 55.0%
ATAGGCCACCAGTTGCATCC+AGG - tig0020408:31668-31687 None:intergenic 55.0%
TGGATGCAACTGGTGGCCTA+TGG + tig0020408:31667-31686 Msa1380790:intron 55.0%
CAAGTGCCTGAGTACGCCAT+AGG - tig0020408:31686-31705 None:intergenic 55.0%
!! AGCACTGGTTCTCAAGGAGG+AGG + tig0020408:43560-43579 Msa1380790:CDS 55.0%
GGGTGGTTCCCCATATGGTT+CGG + tig0020408:44046-44065 Msa1380790:CDS 55.0%
GGTGGTTCCCCATATGGTTC+GGG + tig0020408:44047-44066 Msa1380790:CDS 55.0%
GCGAAGGTTCCCGAACCATA+TGG - tig0020408:44059-44078 None:intergenic 55.0%
! TATGGTTCGGGAACCTTCGC+CGG + tig0020408:44059-44078 Msa1380790:CDS 55.0%
TCAGCCTCAGGTAGCGCATC+AGG - tig0020408:31585-31604 None:intergenic 60.0%
GATGCGCTACCTGAGGCTGA+TGG + tig0020408:31585-31604 Msa1380790:intron 60.0%
TGGTGGCCTATGGCGTACTC+AGG + tig0020408:31677-31696 Msa1380790:intron 60.0%
TGGCGTACTCAGGCACTTGC+AGG + tig0020408:31687-31706 Msa1380790:intron 60.0%
GCACTTGCAGGAAAGCCTGC+AGG + tig0020408:31699-31718 Msa1380790:intron 60.0%
GGTGGTTCCCCGTATGGTTC+CGG + tig0020408:32195-32214 Msa1380790:intron 60.0%
TCCGGAACCTACGCTGGAGA+TGG + tig0020408:32213-32232 Msa1380790:intron 60.0%
GCCATCTCCAGCGTAGGTTC+CGG - tig0020408:32217-32236 None:intergenic 60.0%
TCTCGAGCCATCTCCAGCGT+AGG - tig0020408:32223-32242 None:intergenic 60.0%
CTCGAGACAGCCTACCGAGT+TGG + tig0020408:32236-32255 Msa1380790:intron 60.0%
!! ACAACTCGAGACCGACTCGC+AGG - tig0020408:36761-36780 None:intergenic 60.0%
GCCATCAGCTCACATTGCCC+TGG + tig0020408:36832-36851 Msa1380790:intron 60.0%
GTGGCTGCAACGGTGTGTTG+AGG + tig0020408:37268-37287 Msa1380790:intron 60.0%
!! AGCCAAGGGGCGCCTAAGAA+AGG + tig0020408:37438-37457 Msa1380790:intron 60.0%
!! GCACGATGGCGGATTGGTTC+TGG - tig0020408:37474-37493 None:intergenic 60.0%
!! GCTTTTTGGTGGGGCCATGG+TGG - tig0020408:37771-37790 None:intergenic 60.0%
CTCGGCCTTCCGTCTATGGT+GGG - tig0020408:38016-38035 None:intergenic 60.0%
TCTCGGCCTTCCGTCTATGG+TGG - tig0020408:38017-38036 None:intergenic 60.0%
AGGCACGCCTAGAGCTGTTG+AGG - tig0020408:39711-39730 None:intergenic 60.0%
AGCACCCCCCATCTTCTCAC+GGG + tig0020408:39835-39854 Msa1380790:intron 60.0%
GATGCCCGTGAGAAGATGGG+GGG - tig0020408:39842-39861 None:intergenic 60.0%
GGATGCCCGTGAGAAGATGG+GGG - tig0020408:39843-39862 None:intergenic 60.0%
GGATGGAACTGCCGAGGCTT+AGG - tig0020408:40256-40275 None:intergenic 60.0%
ATTCCTCACAAGGGGAGCGG+CGG + tig0020408:40834-40853 Msa1380790:intron 60.0%
CAAAAACTGCCGCCGCTCCT+AGG - tig0020408:40867-40886 None:intergenic 60.0%
ACTTCGCCGCTGGTGATTGG+AGG - tig0020408:41315-41334 None:intergenic 60.0%
TTTAAAAGGGGCGGCCTCCG+TGG + tig0020408:43049-43068 Msa1380790:CDS 60.0%
ACCTGAAACTCTGCCTGCGG+AGG + tig0020408:43337-43356 Msa1380790:CDS 60.0%
ACCTCCGCAGGCAGAGTTTC+AGG - tig0020408:43341-43360 None:intergenic 60.0%
ATCTTCCCAACGACCTCCGC+AGG - tig0020408:43353-43372 None:intergenic 60.0%
TGCGGAGGTCGTTGGGAAGA+TGG + tig0020408:43352-43371 Msa1380790:CDS 60.0%
GCGGAGGTCGTTGGGAAGAT+GGG + tig0020408:43353-43372 Msa1380790:CDS 60.0%
GAGGTCGTTGGGAAGATGGG+AGG + tig0020408:43356-43375 Msa1380790:CDS 60.0%
TCAGCCTCAGGTAGCGCATC+AGG - tig0020408:31585-31604 None:intergenic 60.0%
GATGCGCTACCTGAGGCTGA+TGG + tig0020408:31585-31604 Msa1380790:intron 60.0%
TGGTGGCCTATGGCGTACTC+AGG + tig0020408:31677-31696 Msa1380790:intron 60.0%
TGGCGTACTCAGGCACTTGC+AGG + tig0020408:31687-31706 Msa1380790:intron 60.0%
GCACTTGCAGGAAAGCCTGC+AGG + tig0020408:31699-31718 Msa1380790:intron 60.0%
CACGAGACAGCCTACCGAGT+TGG + tig0020408:44088-44107 Msa1380790:CDS 60.0%
GGAAGAAACCGGCACCTGGC+AGG - tig0020408:36618-36637 None:intergenic 65.0%
CTTAGGCGCCCCTTGGCTCA+AGG - tig0020408:37436-37455 None:intergenic 65.0%
!! CAGGGTGCACGATGGCGGAT+TGG - tig0020408:37480-37499 None:intergenic 65.0%
! GGGGTGCTACACGTCCTAGG+TGG - tig0020408:39823-39842 None:intergenic 65.0%
!! TGGGGGGTGCTACACGTCCT+AGG - tig0020408:39826-39845 None:intergenic 65.0%
! GGCGGTGCTAACCCTAGGAG+CGG + tig0020408:40852-40871 Msa1380790:intron 65.0%
GGTGCTAACCCTAGGAGCGG+CGG + tig0020408:40855-40874 Msa1380790:intron 65.0%
ACTCTGCCTGCGGAGGTCGT+TGG + tig0020408:43344-43363 Msa1380790:CDS 65.0%
CTCTGCCTGCGGAGGTCGTT+GGG + tig0020408:43345-43364 Msa1380790:CDS 65.0%
TCGGGAACCTTCGCCGGAGA+CGG + tig0020408:44065-44084 Msa1380790:CDS 65.0%
AGGCTGTCTCGTGCCGTCTC+CGG - tig0020408:44081-44100 None:intergenic 65.0%
GGCGCCCCTTGGCTCAAGGA+TGG - tig0020408:37432-37451 None:intergenic 70.0%
! GGAGCGGCGGTGCTAACCCT+AGG + tig0020408:40847-40866 Msa1380790:intron 70.0%
AAAGGGGCGGCCTCCGTGGA+AGG + tig0020408:43053-43072 Msa1380790:CDS 70.0%
TCTCGTGCCGTCTCCGGCGA+AGG - tig0020408:44075-44094 None:intergenic 70.0%
GCACCGCCGCTCCCCTTGTG+AGG - tig0020408:40840-40859 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
tig0020408 gene 31547 44582 31547 ID=Msa1380790;Name=Msa1380790
tig0020408 mRNA 31547 44582 31547 ID=Msa1380790-mRNA-1;Parent=Msa1380790;Name=Msa1380790-mRNA-1;_AED=0.30;_eAED=0.30;_QI=102|1|1|1|0.75|0.6|5|401|204
tig0020408 exon 31547 31573 31547 ID=Msa1380790-mRNA-1:exon:7243;Parent=Msa1380790-mRNA-1
tig0020408 exon 41524 41624 41524 ID=Msa1380790-mRNA-1:exon:7244;Parent=Msa1380790-mRNA-1
tig0020408 exon 43004 43097 43004 ID=Msa1380790-mRNA-1:exon:7245;Parent=Msa1380790-mRNA-1
tig0020408 exon 43335 43597 43335 ID=Msa1380790-mRNA-1:exon:7246;Parent=Msa1380790-mRNA-1
tig0020408 exon 43950 44582 43950 ID=Msa1380790-mRNA-1:exon:7247;Parent=Msa1380790-mRNA-1
tig0020408 five_prime_UTR 31547 31573 31547 ID=Msa1380790-mRNA-1:five_prime_utr;Parent=Msa1380790-mRNA-1
tig0020408 five_prime_UTR 41524 41598 41524 ID=Msa1380790-mRNA-1:five_prime_utr;Parent=Msa1380790-mRNA-1
tig0020408 CDS 41599 41624 41599 ID=Msa1380790-mRNA-1:cds;Parent=Msa1380790-mRNA-1
tig0020408 CDS 43004 43097 43004 ID=Msa1380790-mRNA-1:cds;Parent=Msa1380790-mRNA-1
tig0020408 CDS 43335 43597 43335 ID=Msa1380790-mRNA-1:cds;Parent=Msa1380790-mRNA-1
tig0020408 CDS 43950 44181 43950 ID=Msa1380790-mRNA-1:cds;Parent=Msa1380790-mRNA-1
tig0020408 three_prime_UTR 44182 44582 44182 ID=Msa1380790-mRNA-1:three_prime_utr;Parent=Msa1380790-mRNA-1
Gene Sequence

>Msa1380790

ATGGCTACCACTAAAGTTTACATTGTTTACTATTCTATGTACGGACATGTTGAGAAGCTAGCTCAAGAGATTTTAAAAGGGGCGGCCTCCGTGGAAGGAGTAGAAGCAAAGCTATGGCAGGTACCTGAAACTCTGCCTGCGGAGGTCGTTGGGAAGATGGGAGGACCTCCAAAGAGTGATGTGCCAATTATTACACCTGATGCGCTACCTGAGGCTGATGGTTTGTTGCTTGGCTTCCCGACAAGATTTGGAATGATGGCTGCTCAGTTTAAAGCATTCCTGGATGCAACTGGTGGCCTATGGCGTACTCAGGCACTTGCAGGAAAGCCTGCAGGAATCTTTTACAGCACTGGTTCTCAAGGAGGAGGACAAGAGACTACACCGTTGACATCCATCACTCAGCTTGCTCACCATGGAATGATTTTTGTGCCCATTGGTTACACATTTGGTGCTGGTATGTTTGAGATGGAGAGCATAAAGGGTGGTTCCCCATATGGTTCGGGAACCTTCGCCGGAGACGGCACGAGACAGCCTACCGAGTTGGAATTGGCTCAAGCTTTCCATCAGGGGAAGTACTTTGCTGGCATTGCAAAGAAGCTCAAAGGATCTCAGTGA
Protein sequence

>Msa1380790

MATTKVYIVYYSMYGHVEKLAQEILKGAASVEGVEAKLWQVPETLPAEVVGKMGGPPKSDVPIITPDALPEADGLLLGFPTRFGMMAAQFKAFLDATGGLWRTQALAGKPAGIFYSTGSQGGGQETTPLTSITQLAHHGMIFVPIGYTFGAGMFEMESIKGGSPYGSGTFAGDGTRQPTELELAQAFHQGKYFAGIAKKLKGSQ*