Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205770 | sp|Q43077|AMO_PEA | 83.383 | 674 | 109 | 3 | 1 | 673 | 1 | 672 | 0.0 | 1188 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205770 | A0A2Z6NA55 | 89.333 | 675 | 65 | 3 | 1 | 675 | 1 | 668 | 0.0 | 1249 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000800 | Msa1205770 | 0.806890 | 6.602468e-50 | -8.615850e-47 |
| Msa0011870 | Msa1205770 | 0.816991 | 4.155618e-52 | -8.615850e-47 |
| Msa0013270 | Msa1205770 | 0.810786 | 9.694503e-51 | -8.615850e-47 |
| Msa0025570 | Msa1205770 | 0.804391 | 2.209193e-49 | -8.615850e-47 |
| Msa0030050 | Msa1205770 | 0.805706 | 1.172776e-49 | -8.615850e-47 |
| Msa0037180 | Msa1205770 | 0.828060 | 1.108915e-54 | -8.615850e-47 |
| Msa0060690 | Msa1205770 | 0.839893 | 1.206780e-57 | -8.615850e-47 |
| Msa0062190 | Msa1205770 | 0.801155 | 1.028874e-48 | -8.615850e-47 |
| Msa0073110 | Msa1205770 | 0.814673 | 1.366626e-51 | -8.615850e-47 |
| Msa0074860 | Msa1205770 | -0.808681 | 2.748045e-50 | -8.615850e-47 |
| Msa0087900 | Msa1205770 | 0.811950 | 5.416858e-51 | -8.615850e-47 |
| Msa0092220 | Msa1205770 | 0.826177 | 3.130612e-54 | -8.615850e-47 |
| Msa0098380 | Msa1205770 | 0.803052 | 4.190520e-49 | -8.615850e-47 |
| Msa0101380 | Msa1205770 | 0.805075 | 1.590346e-49 | -8.615850e-47 |
| Msa0106540 | Msa1205770 | 0.809381 | 1.946031e-50 | -8.615850e-47 |
| Msa0604190 | Msa1205770 | 0.806458 | 8.146126e-50 | -8.615850e-47 |
| Msa0615070 | Msa1205770 | 0.819974 | 8.759739e-53 | -8.615850e-47 |
| Msa0616300 | Msa1205770 | 0.818377 | 2.023004e-52 | -8.615850e-47 |
| Msa0620340 | Msa1205770 | 0.809934 | 1.480482e-50 | -8.615850e-47 |
| Msa0643230 | Msa1205770 | 0.803694 | 3.085245e-49 | -8.615850e-47 |
| Msa0647970 | Msa1205770 | 0.808588 | 2.876336e-50 | -8.615850e-47 |
| Msa0657340 | Msa1205770 | 0.817516 | 3.166139e-52 | -8.615850e-47 |
| Msa0660650 | Msa1205770 | 0.814025 | 1.901121e-51 | -8.615850e-47 |
| Msa0682110 | Msa1205770 | 0.833184 | 6.168160e-56 | -8.615850e-47 |
| Msa0682160 | Msa1205770 | 0.844782 | 6.106904e-59 | -8.615850e-47 |
| Msa0698280 | Msa1205770 | 0.801124 | 1.044174e-48 | -8.615850e-47 |
| Msa0707330 | Msa1205770 | 0.804146 | 2.485394e-49 | -8.615850e-47 |
| Msa0712880 | Msa1205770 | 0.801168 | 1.022809e-48 | -8.615850e-47 |
| Msa0733560 | Msa1205770 | 0.818045 | 2.405767e-52 | -8.615850e-47 |
| Msa0739750 | Msa1205770 | 0.808278 | 3.350044e-50 | -8.615850e-47 |
| Msa0751510 | Msa1205770 | 0.816427 | 5.560418e-52 | -8.615850e-47 |
| Msa0758880 | Msa1205770 | -0.800097 | 1.690891e-48 | -8.615850e-47 |
| Msa0762320 | Msa1205770 | 0.802637 | 5.104179e-49 | -8.615850e-47 |
| Msa0802600 | Msa1205770 | 0.806705 | 7.224860e-50 | -8.615850e-47 |
| Msa0829250 | Msa1205770 | -0.805862 | 1.087352e-49 | -8.615850e-47 |
| Msa0829990 | Msa1205770 | 0.841642 | 4.197997e-58 | -8.615850e-47 |
| Msa0127220 | Msa1205770 | -0.802459 | 5.553410e-49 | -8.615850e-47 |
| Msa0127910 | Msa1205770 | -0.800300 | 1.537651e-48 | -8.615850e-47 |
| Msa0141410 | Msa1205770 | 0.821499 | 3.908419e-53 | -8.615850e-47 |
| Msa0164560 | Msa1205770 | 0.808832 | 2.551425e-50 | -8.615850e-47 |
| Msa0174950 | Msa1205770 | 0.811884 | 5.599456e-51 | -8.615850e-47 |
| Msa0177320 | Msa1205770 | 0.814419 | 1.555542e-51 | -8.615850e-47 |
| Msa0203880 | Msa1205770 | 0.810693 | 1.015491e-50 | -8.615850e-47 |
| Msa0216150 | Msa1205770 | -0.800886 | 1.167772e-48 | -8.615850e-47 |
| Msa0369990 | Msa1205770 | 0.831184 | 1.927092e-55 | -8.615850e-47 |
| Msa0380110 | Msa1205770 | 0.805311 | 1.419238e-49 | -8.615850e-47 |
| Msa0382020 | Msa1205770 | -0.802960 | 4.377376e-49 | -8.615850e-47 |
| Msa0386910 | Msa1205770 | 0.823538 | 1.312253e-53 | -8.615850e-47 |
| Msa0390590 | Msa1205770 | -0.800457 | 1.428594e-48 | -8.615850e-47 |
| Msa0401500 | Msa1205770 | 0.806711 | 7.204679e-50 | -8.615850e-47 |
| Msa0403740 | Msa1205770 | -0.818369 | 2.031827e-52 | -8.615850e-47 |
| Msa0405200 | Msa1205770 | 0.830756 | 2.455156e-55 | -8.615850e-47 |
| Msa0415010 | Msa1205770 | 0.818664 | 1.741869e-52 | -8.615850e-47 |
| Msa0427560 | Msa1205770 | 0.808961 | 2.394462e-50 | -8.615850e-47 |
| Msa0449500 | Msa1205770 | 0.819255 | 1.278774e-52 | -8.615850e-47 |
| Msa0454770 | Msa1205770 | 0.803257 | 3.799499e-49 | -8.615850e-47 |
| Msa0456450 | Msa1205770 | -0.818046 | 2.404234e-52 | -8.615850e-47 |
| Msa0459930 | Msa1205770 | 0.832030 | 1.192929e-55 | -8.615850e-47 |
| Msa0987640 | Msa1205770 | 0.806501 | 7.976718e-50 | -8.615850e-47 |
| Msa1029860 | Msa1205770 | 0.806435 | 8.237128e-50 | -8.615850e-47 |
| Msa1031780 | Msa1205770 | 0.804721 | 1.885253e-49 | -8.615850e-47 |
| Msa1035050 | Msa1205770 | 0.807062 | 6.072947e-50 | -8.615850e-47 |
| Msa1041250 | Msa1205770 | 0.813696 | 2.246143e-51 | -8.615850e-47 |
| Msa1062060 | Msa1205770 | 0.811005 | 8.693100e-51 | -8.615850e-47 |
| Msa1066150 | Msa1205770 | 0.803313 | 3.700873e-49 | -8.615850e-47 |
| Msa1071230 | Msa1205770 | 0.824335 | 8.533777e-54 | -8.615850e-47 |
| Msa1071350 | Msa1205770 | 0.811270 | 7.613193e-51 | -8.615850e-47 |
| Msa1075030 | Msa1205770 | 0.800965 | 1.125030e-48 | -8.615850e-47 |
| Msa1075090 | Msa1205770 | 0.823238 | 1.542723e-53 | -8.615850e-47 |
| Msa1080820 | Msa1205770 | 0.805680 | 1.187727e-49 | -8.615850e-47 |
| Msa1095590 | Msa1205770 | 0.811184 | 7.949168e-51 | -8.615850e-47 |
| Msa0253230 | Msa1205770 | -0.802624 | 5.136416e-49 | -8.615850e-47 |
| Msa0253450 | Msa1205770 | 0.800073 | 1.710337e-48 | -8.615850e-47 |
| Msa0270730 | Msa1205770 | -0.806385 | 8.439040e-50 | -8.615850e-47 |
| Msa0279810 | Msa1205770 | 0.800574 | 1.351899e-48 | -8.615850e-47 |
| Msa0285420 | Msa1205770 | 0.831069 | 2.057430e-55 | -8.615850e-47 |
| Msa0287480 | Msa1205770 | 0.802915 | 4.471940e-49 | -8.615850e-47 |
| Msa0287630 | Msa1205770 | 0.803242 | 3.826707e-49 | -8.615850e-47 |
| Msa0318490 | Msa1205770 | 0.805056 | 1.605199e-49 | -8.615850e-47 |
| Msa0319220 | Msa1205770 | 0.804027 | 2.631193e-49 | -8.615850e-47 |
| Msa0324220 | Msa1205770 | 0.822351 | 2.481550e-53 | -8.615850e-47 |
| Msa0326770 | Msa1205770 | 0.802982 | 4.332567e-49 | -8.615850e-47 |
| Msa0333770 | Msa1205770 | 0.805869 | 1.083618e-49 | -8.615850e-47 |
| Msa0345050 | Msa1205770 | 0.815547 | 8.741192e-52 | -8.615850e-47 |
| Msa0354600 | Msa1205770 | 0.814595 | 1.422138e-51 | -8.615850e-47 |
| Msa0364030 | Msa1205770 | -0.817955 | 2.520931e-52 | -8.615850e-47 |
| Msa1107250 | Msa1205770 | 0.800730 | 1.256545e-48 | -8.615850e-47 |
| Msa1108560 | Msa1205770 | 0.838911 | 2.170757e-57 | -8.615850e-47 |
| Msa1115980 | Msa1205770 | 0.813351 | 2.674334e-51 | -8.615850e-47 |
| Msa1118960 | Msa1205770 | 0.806875 | 6.649962e-50 | -8.615850e-47 |
| Msa1129120 | Msa1205770 | -0.805410 | 1.353190e-49 | -8.615850e-47 |
| Msa1132880 | Msa1205770 | -0.800676 | 1.288833e-48 | -8.615850e-47 |
| Msa1136630 | Msa1205770 | 0.819863 | 9.286884e-53 | -8.615850e-47 |
| Msa1142390 | Msa1205770 | 0.812537 | 4.033207e-51 | -8.615850e-47 |
| Msa1150760 | Msa1205770 | 0.800711 | 1.267729e-48 | -8.615850e-47 |
| Msa1174280 | Msa1205770 | 0.813718 | 2.221448e-51 | -8.615850e-47 |
| Msa1179340 | Msa1205770 | 0.810878 | 9.258190e-51 | -8.615850e-47 |
| Msa1181090 | Msa1205770 | 0.810485 | 1.125788e-50 | -8.615850e-47 |
| Msa1183870 | Msa1205770 | 0.813461 | 2.529970e-51 | -8.615850e-47 |
| Msa1191530 | Msa1205770 | -0.805937 | 1.048695e-49 | -8.615850e-47 |
| Msa1202110 | Msa1205770 | 0.834825 | 2.395350e-56 | -8.615850e-47 |
| Msa1205770 | Msa1205810 | 0.981109 | 8.529938e-152 | -8.615850e-47 |
| Msa1205770 | Msa1209990 | -0.800634 | 1.314299e-48 | -8.615850e-47 |
| Msa1205770 | Msa1217260 | 0.807226 | 5.606139e-50 | -8.615850e-47 |
| Msa1205770 | Msa1217890 | 0.813367 | 2.653792e-51 | -8.615850e-47 |
| Msa1205770 | Msa1239210 | 0.804266 | 2.346348e-49 | -8.615850e-47 |
| Msa1205770 | Msa1254870 | 0.835733 | 1.412993e-56 | -8.615850e-47 |
| Msa1205770 | Msa1254910 | 0.812029 | 5.207387e-51 | -8.615850e-47 |
| Msa1205770 | Msa1256990 | 0.905871 | 2.714859e-80 | -8.615850e-47 |
| Msa1205770 | Msa1263110 | 0.809690 | 1.670168e-50 | -8.615850e-47 |
| Msa1205770 | Msa1269500 | 0.804512 | 2.084910e-49 | -8.615850e-47 |
| Msa1205770 | Msa1281780 | 0.808638 | 2.806491e-50 | -8.615850e-47 |
| Msa1205770 | Msa1284020 | 0.806555 | 7.772021e-50 | -8.615850e-47 |
| Msa1205770 | Msa1297850 | 0.927520 | 1.047646e-91 | -8.615850e-47 |
| Msa1205770 | Msa1298480 | -0.800322 | 1.522124e-48 | -8.615850e-47 |
| Msa1205770 | Msa1321010 | 0.809435 | 1.895205e-50 | -8.615850e-47 |
| Msa1205770 | Msa1328430 | 0.835247 | 1.875640e-56 | -8.615850e-47 |
| Msa1205770 | Msa1330400 | 0.835230 | 1.894097e-56 | -8.615850e-47 |
| Msa1205770 | Msa1340440 | 0.818915 | 1.527453e-52 | -8.615850e-47 |
| Msa1205770 | Msa1342360 | -0.818993 | 1.466606e-52 | -8.615850e-47 |
| Msa1205770 | Msa1361980 | 0.804413 | 2.185789e-49 | -8.615850e-47 |
| Msa1205770 | Msa1364190 | 0.807486 | 4.937981e-50 | -8.615850e-47 |
| Msa1205770 | Msa1366480 | 0.815340 | 9.719881e-52 | -8.615850e-47 |
| Msa1205770 | Msa1368420 | 0.818842 | 1.587296e-52 | -8.615850e-47 |
| Msa1205770 | Msa1380790 | 0.810689 | 1.017095e-50 | -8.615850e-47 |
| Msa1205770 | Msa1383220 | 0.819274 | 1.265984e-52 | -8.615850e-47 |
| Msa1205770 | Msa1388720 | -0.805618 | 1.223871e-49 | -8.615850e-47 |
| Msa1205770 | Msa1405830 | 0.808190 | 3.497583e-50 | -8.615850e-47 |
| Msa1205770 | Msa1406840 | 0.801398 | 9.175632e-49 | -8.615850e-47 |
| Msa1205770 | Msa1407810 | 0.815604 | 8.490474e-52 | -8.615850e-47 |
| Msa1205770 | Msa1413150 | 0.820261 | 7.532837e-53 | -8.615850e-47 |
| Msa1205770 | Msa1420540 | 0.810951 | 8.926972e-51 | -8.615850e-47 |
| Msa1205770 | Msa1429470 | 0.819042 | 1.429213e-52 | -8.615850e-47 |
| Msa1205770 | Msa1433360 | 0.814859 | 1.242729e-51 | -8.615850e-47 |
| Msa1205770 | Msa1437780 | 0.817387 | 3.386768e-52 | -8.615850e-47 |
| Msa1205770 | Msa1459920 | 0.803923 | 2.764491e-49 | -8.615850e-47 |
| Msa0496070 | Msa1205770 | 0.804797 | 1.818274e-49 | -8.615850e-47 |
| Msa0497680 | Msa1205770 | 0.818269 | 2.141242e-52 | -8.615850e-47 |
| Msa0501080 | Msa1205770 | 0.806276 | 8.899575e-50 | -8.615850e-47 |
| Msa0510870 | Msa1205770 | 0.804346 | 2.257912e-49 | -8.615850e-47 |
| Msa0518190 | Msa1205770 | 0.801875 | 7.325277e-49 | -8.615850e-47 |
| Msa0523720 | Msa1205770 | 0.807996 | 3.846903e-50 | -8.615850e-47 |
| Msa0531050 | Msa1205770 | 0.823156 | 1.611794e-53 | -8.615850e-47 |
| Msa0546590 | Msa1205770 | 0.807897 | 4.037726e-50 | -8.615850e-47 |
| Msa0556270 | Msa1205770 | 0.800448 | 1.434480e-48 | -8.615850e-47 |
| Msa0557250 | Msa1205770 | 0.815228 | 1.029250e-51 | -8.615850e-47 |
| Msa0561110 | Msa1205770 | 0.805554 | 1.262251e-49 | -8.615850e-47 |
| Msa0565180 | Msa1205770 | 0.819609 | 1.061899e-52 | -8.615850e-47 |
| Msa0567330 | Msa1205770 | 0.819569 | 1.084218e-52 | -8.615850e-47 |
| Msa0567570 | Msa1205770 | 0.804631 | 1.968507e-49 | -8.615850e-47 |
| Msa0576320 | Msa1205770 | 0.813941 | 1.983125e-51 | -8.615850e-47 |
| Msa0580410 | Msa1205770 | -0.800304 | 1.534482e-48 | -8.615850e-47 |
| Msa0580890 | Msa1205770 | -0.800943 | 1.137063e-48 | -8.615850e-47 |
| Msa0848010 | Msa1205770 | 0.851525 | 8.388111e-61 | -8.615850e-47 |
| Msa0867470 | Msa1205770 | 0.804305 | 2.301948e-49 | -8.615850e-47 |
| Msa0873880 | Msa1205770 | 0.840627 | 7.760117e-58 | -8.615850e-47 |
| Msa0873940 | Msa1205770 | 0.820510 | 6.603481e-53 | -8.615850e-47 |
| Msa0903020 | Msa1205770 | 0.801451 | 8.947837e-49 | -8.615850e-47 |
| Msa0906680 | Msa1205770 | 0.826443 | 2.705110e-54 | -8.615850e-47 |
| Msa0975950 | Msa1205770 | 0.826539 | 2.566146e-54 | -8.615850e-47 |
| Msa0975960 | Msa1205770 | 0.812279 | 4.592684e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205770 | MtrunA17_Chr4g0065981 | 85.438 | 673 | 97 | 1 | 3 | 675 | 4 | 675 | 0.0 | 1220 |
| Msa1205770 | MtrunA17_Chr4g0065961 | 80.988 | 668 | 125 | 2 | 6 | 673 | 1 | 666 | 0.0 | 1137 |
| Msa1205770 | MtrunA17_Chr4g0065991 | 86.614 | 508 | 68 | 0 | 168 | 675 | 1 | 508 | 0.0 | 941 |
| Msa1205770 | MtrunA17_Chr1g0205571 | 57.440 | 672 | 281 | 3 | 6 | 673 | 1 | 671 | 0.0 | 824 |
| Msa1205770 | MtrunA17_Chr4g0023331 | 87.348 | 411 | 52 | 0 | 265 | 675 | 5 | 415 | 0.0 | 765 |
| Msa1205770 | MtrunA17_Chr1g0205541 | 47.583 | 662 | 331 | 5 | 2 | 660 | 10 | 658 | 0.0 | 654 |
| Msa1205770 | MtrunA17_Chr3g0119641 | 45.086 | 641 | 338 | 10 | 31 | 661 | 77 | 713 | 0.0 | 580 |
| Msa1205770 | MtrunA17_Chr4g0023321 | 71.321 | 265 | 72 | 4 | 1 | 264 | 1 | 262 | 5.03e-129 | 381 |
| Msa1205770 | MtrunA17_Chr3g0117081 | 27.023 | 692 | 434 | 19 | 22 | 660 | 63 | 736 | 1.78e-75 | 258 |
| Msa1205770 | MtrunA17_Chr5g0412801 | 28.239 | 687 | 413 | 23 | 32 | 660 | 44 | 708 | 3.84e-73 | 250 |
| Msa1205770 | MtrunA17_Chr8g0368011 | 27.255 | 499 | 295 | 17 | 32 | 481 | 82 | 561 | 9.68e-47 | 175 |
| Msa1205770 | MtrunA17_Chr8g0368021 | 37.795 | 127 | 77 | 2 | 544 | 668 | 37 | 163 | 4.00e-21 | 91.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205770 | AT1G31710.1 | 52.535 | 651 | 300 | 7 | 31 | 673 | 27 | 676 | 0.0 | 710 |
| Msa1205770 | AT1G31690.1 | 52.396 | 647 | 302 | 6 | 32 | 673 | 27 | 672 | 0.0 | 708 |
| Msa1205770 | AT1G31670.1 | 50.531 | 659 | 302 | 9 | 21 | 673 | 96 | 736 | 0.0 | 670 |
| Msa1205770 | AT4G14940.1 | 46.095 | 653 | 337 | 6 | 14 | 660 | 6 | 649 | 0.0 | 631 |
| Msa1205770 | AT4G12290.1 | 43.964 | 671 | 344 | 14 | 23 | 673 | 76 | 734 | 0.0 | 585 |
| Msa1205770 | AT1G62810.1 | 42.638 | 652 | 361 | 10 | 31 | 673 | 59 | 706 | 0.0 | 556 |
| Msa1205770 | AT3G43670.1 | 43.192 | 639 | 350 | 10 | 31 | 660 | 40 | 674 | 0.0 | 554 |
| Msa1205770 | AT4G12290.2 | 43.044 | 611 | 310 | 16 | 23 | 610 | 76 | 671 | 1.01e-170 | 504 |
| Msa1205770 | AT4G12280.1 | 49.135 | 289 | 139 | 2 | 393 | 673 | 5 | 293 | 3.67e-99 | 306 |
| Msa1205770 | AT4G12270.1 | 37.056 | 394 | 211 | 13 | 23 | 390 | 78 | 460 | 7.94e-78 | 256 |
| Msa1205770 | AT2G42490.1 | 27.220 | 687 | 438 | 21 | 23 | 660 | 70 | 743 | 2.35e-72 | 249 |
Find 148 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAGATAGTAATTGATTTA+AGG | 0.166639 | 8_1:-62241466 | Msa1205770:CDS |
| TTCAGGTATACTGGAAATTA+AGG | 0.179273 | 8_1:-62238684 | Msa1205770:CDS |
| GAATACTCTTCTTTGGTTAA+AGG | 0.191305 | 8_1:+62241671 | None:intergenic |
| TTCTTTGATGTTGGCGAGTA+TGG | 0.207924 | 8_1:-62239943 | Msa1205770:CDS |
| AGTGCTTAATATTGGCATTA+TGG | 0.226913 | 8_1:+62237973 | None:intergenic |
| CGGATGAGAACACAGAATTT+AGG | 0.259079 | 8_1:-62241103 | Msa1205770:CDS |
| GTTCAAAGAGAAAGAGTTAT+TGG | 0.263546 | 8_1:-62238481 | Msa1205770:CDS |
| GACAAGAGAATACTCTTCTT+TGG | 0.277511 | 8_1:+62241664 | None:intergenic |
| TGTGACCCAAACATTATAAT+TGG | 0.295340 | 8_1:+62238262 | None:intergenic |
| TATCTTGACCTTGATATTGA+TGG | 0.312207 | 8_1:-62238560 | Msa1205770:CDS |
| ACAATTGTAATTCCAGTAAT+AGG | 0.316826 | 8_1:+62241188 | None:intergenic |
| GTGGCAAGACTGTGTTGTTT+AGG | 0.333387 | 8_1:+62241053 | None:intergenic |
| GGATGAGAACACAGAATTTA+GGG | 0.335102 | 8_1:-62241102 | Msa1205770:CDS |
| AGATCAATGGCCACAGTGTT+AGG | 0.341442 | 8_1:-62241004 | Msa1205770:intron |
| AGGAGTCTTACGAATTCATT+AGG | 0.346250 | 8_1:+62239748 | None:intergenic |
| GTGCTTAATATTGGCATTAT+GGG | 0.347461 | 8_1:+62237974 | None:intergenic |
| ATATATGTTAGGCCTATTAC+TGG | 0.351947 | 8_1:-62241200 | Msa1205770:CDS |
| GAGAAGATACTTTAGCTGTT+TGG | 0.371659 | 8_1:-62238184 | Msa1205770:CDS |
| AGCATACAGATAGCACTTTC+AGG | 0.372475 | 8_1:-62238701 | Msa1205770:intron |
| ATGGATTTAGCTGGGCAAAT+TGG | 0.375010 | 8_1:-62240128 | Msa1205770:intron |
| AATAGGCCTAACATATATAT+TGG | 0.375065 | 8_1:+62241205 | None:intergenic |
| TCAAAAGCAGTGCTTAATAT+TGG | 0.375787 | 8_1:+62237965 | None:intergenic |
| TATACATACCGCAGGTTTGA+TGG | 0.383102 | 8_1:+62239426 | None:intergenic |
| TGGCAAGACTGTGTTGTTTA+GGG | 0.384366 | 8_1:+62241054 | None:intergenic |
| CCCAGAGATGTTACATGGCC+TGG | 0.384705 | 8_1:-62237890 | Msa1205770:CDS |
| AAAAGCTACTTTGTTCTTTG+AGG | 0.389952 | 8_1:+62241613 | None:intergenic |
| ACCAGGCCATGTAACATCTC+TGG | 0.401042 | 8_1:+62237889 | None:intergenic |
| GATAGCACTTTCAGGTATAC+TGG | 0.401908 | 8_1:-62238693 | Msa1205770:CDS |
| ATTTGTGCATGACTGTTGTT+TGG | 0.402615 | 8_1:+62241642 | None:intergenic |
| AGTGGATGAGATGGAATTGC+TGG | 0.403828 | 8_1:+62238326 | None:intergenic |
| GAATGTATGTATCAATGAAC+TGG | 0.407738 | 8_1:+62239866 | None:intergenic |
| GATGTTGGCGAGTATGGATT+TGG | 0.411471 | 8_1:-62239937 | Msa1205770:CDS |
| ATAGCATTCTTCAAGAGAAT+CGG | 0.412595 | 8_1:+62239826 | None:intergenic |
| GGAGAAAGTGTCTTAAGAAC+TGG | 0.414331 | 8_1:+62237911 | None:intergenic |
| TTCACTATTGCAAGTTCACC+TGG | 0.415482 | 8_1:+62238398 | None:intergenic |
| TAAGCACAAGGATGAGGTTA+AGG | 0.426190 | 8_1:-62238651 | Msa1205770:CDS |
| ATTGCCTTTGTGAATATTGT+CGG | 0.426449 | 8_1:+62241427 | None:intergenic |
| CGAGGGATTGTTATAACACT+TGG | 0.427479 | 8_1:+62241530 | None:intergenic |
| TAGCATTCTTCAAGAGAATC+GGG | 0.427906 | 8_1:+62239827 | None:intergenic |
| CTTGTAAGAAGAGGAGTGTC+AGG | 0.431816 | 8_1:+62241738 | None:intergenic |
| TAACACTGTGGCCATTGATC+TGG | 0.431893 | 8_1:+62241006 | None:intergenic |
| GTTTGTTCTACTTTCACAAT+GGG | 0.439623 | 8_1:-62241293 | Msa1205770:CDS |
| AGCTGGAGTGATATTATCAT+TGG | 0.439852 | 8_1:-62240079 | Msa1205770:CDS |
| GTTCATCAACCGAGAGTGTT+GGG | 0.441038 | 8_1:+62241399 | None:intergenic |
| ATGTGGCGTCACACTGAAAC+CGG | 0.441572 | 8_1:-62239775 | Msa1205770:CDS |
| ATGGGAAAATCTTCTTGTGC+TGG | 0.444846 | 8_1:+62237992 | None:intergenic |
| CCGAAGTAAACTTGATAGTA+AGG | 0.446212 | 8_1:-62239510 | Msa1205770:CDS |
| CTATGACAACGTTGTAGATT+GGG | 0.446410 | 8_1:-62239467 | Msa1205770:CDS |
| GATTGTTATAACACTTGGTT+CGG | 0.448572 | 8_1:+62241535 | None:intergenic |
| ACTATGACAACGTTGTAGAT+TGG | 0.450809 | 8_1:-62239468 | Msa1205770:CDS |
| TCAGGTATACTGGAAATTAA+GGG | 0.452813 | 8_1:-62238683 | Msa1205770:CDS |
| AGCTACTTTGTTCTTTGAGG+TGG | 0.453700 | 8_1:+62241616 | None:intergenic |
| TACGAATTCATTAGGAATGC+CGG | 0.454594 | 8_1:+62239756 | None:intergenic |
| TTTAAGACTTTCTTTGATGT+TGG | 0.457245 | 8_1:-62239952 | Msa1205770:CDS |
| AAAACTCGTCTGATGGATCT+TGG | 0.459489 | 8_1:+62239977 | None:intergenic |
| ACTTTCACAATGGGATGGTA+TGG | 0.469858 | 8_1:-62241284 | Msa1205770:CDS |
| GTAAAAGCACCACGTATTTG+TGG | 0.470697 | 8_1:+62238284 | None:intergenic |
| TGGCCATTGATCTGGAAGCC+TGG | 0.471032 | 8_1:+62241014 | None:intergenic |
| TTCCTCTCGAAGAAATTAGT+TGG | 0.487717 | 8_1:+62237935 | None:intergenic |
| GCGGGTGTTGAAAATGCAAT+GGG | 0.496765 | 8_1:+62241699 | None:intergenic |
| TCAATGAACTGGGCATTTGA+TGG | 0.497827 | 8_1:+62239877 | None:intergenic |
| TGTTTGTACCATCAATATCA+AGG | 0.502446 | 8_1:+62238552 | None:intergenic |
| GACAATATTCACAAAGGCAA+TGG | 0.505606 | 8_1:-62241425 | Msa1205770:CDS |
| GCTACTTTGTTCTTTGAGGT+GGG | 0.507842 | 8_1:+62241617 | None:intergenic |
| TTAAATCAATTACTATCTCA+TGG | 0.508058 | 8_1:+62241468 | None:intergenic |
| CAATGGTTTCCCAACACTCT+CGG | 0.509387 | 8_1:-62241408 | Msa1205770:CDS |
| TTAAAGTAAAACTCGTCTGA+TGG | 0.510422 | 8_1:+62239970 | None:intergenic |
| ATGGAATTGCTGGGATCAAA+CGG | 0.516903 | 8_1:+62238336 | None:intergenic |
| ACACTGCCAATATATATGTT+AGG | 0.519464 | 8_1:-62241211 | Msa1205770:CDS |
| TTTGATGGACAATCACGGTT+GGG | 0.521247 | 8_1:+62239892 | None:intergenic |
| ATGGAGAAGAGAAAAGTAGT+AGG | 0.529413 | 8_1:-62241265 | Msa1205770:CDS |
| CCTTACTATCAAGTTTACTT+CGG | 0.531083 | 8_1:+62239510 | None:intergenic |
| TGTTCATCAACCGAGAGTGT+TGG | 0.531268 | 8_1:+62241398 | None:intergenic |
| TCGTCTGATGGATCTTGGTA+TGG | 0.531320 | 8_1:+62239982 | None:intergenic |
| GGTCCAGGCTTCCAGATCAA+TGG | 0.535158 | 8_1:-62241017 | Msa1205770:CDS |
| CAAGATAGTAAATGTATAAG+TGG | 0.535451 | 8_1:+62238576 | None:intergenic |
| TCACATCAGAGCCAACCATT+CGG | 0.540930 | 8_1:-62241077 | Msa1205770:CDS |
| ATAGGATTTGATGTGCGAGC+TGG | 0.541558 | 8_1:-62240096 | Msa1205770:CDS |
| ATCTGGAAGCCTGGACCTTG+AGG | 0.542953 | 8_1:+62241023 | None:intergenic |
| TCAGTTAAAAGTGGATGAGA+TGG | 0.543079 | 8_1:+62238317 | None:intergenic |
| ATCACAATTGGACTTTCCCC+AGG | 0.545711 | 8_1:-62238416 | Msa1205770:CDS |
| TAATCATCCTCAGTTAAAAG+TGG | 0.547068 | 8_1:+62238308 | None:intergenic |
| CTCGTCGTGTATTATACAAA+GGG | 0.547283 | 8_1:-62240026 | Msa1205770:CDS |
| ACTCATCAACCTCAAGGTCC+AGG | 0.550206 | 8_1:-62241032 | Msa1205770:CDS |
| AGTAAATGTATAAGTGGTCG+TGG | 0.551651 | 8_1:+62238582 | None:intergenic |
| ATTTGATGGACAATCACGGT+TGG | 0.552322 | 8_1:+62239891 | None:intergenic |
| CCAGGCCATGTAACATCTCT+GGG | 0.552849 | 8_1:+62237890 | None:intergenic |
| CTCTATGTTGATCATAGCCA+TGG | 0.553409 | 8_1:-62238206 | Msa1205770:CDS |
| GTTGTTTAGGGCCGAATGGT+TGG | 0.554904 | 8_1:+62241066 | None:intergenic |
| AGCGGGTGTTGAAAATGCAA+TGG | 0.558186 | 8_1:+62241698 | None:intergenic |
| AGTAAGGAGTATAGTTACTG+TGG | 0.558510 | 8_1:-62239494 | Msa1205770:CDS |
| TCCGACGTCGTTTCCGACCG+CGG | 0.562752 | 8_1:+62238361 | None:intergenic |
| TTCATTGATGCAATGAAAGG+AGG | 0.563816 | 8_1:+62241344 | None:intergenic |
| CGAGAAAACAAGTTTAAAGA+CGG | 0.565335 | 8_1:-62238522 | Msa1205770:CDS |
| AGTTATTGAAGCTGTGCCTA+CGG | 0.569794 | 8_1:-62241123 | Msa1205770:CDS |
| AAACATTAAGCACAAGGATG+AGG | 0.570599 | 8_1:-62238657 | Msa1205770:CDS |
| CAGCTAAAGTATCTTCTCCA+TGG | 0.571385 | 8_1:+62238189 | None:intergenic |
| TTTCTCCCAGAGATGTTACA+TGG | 0.571991 | 8_1:-62237895 | Msa1205770:CDS |
| GTTCTACTTTCACAATGGGA+TGG | 0.574075 | 8_1:-62241289 | Msa1205770:CDS |
| GGAAGATCTACATGGTACCT+TGG | 0.578264 | 8_1:-62238630 | Msa1205770:CDS |
| GATTGGGAGTTCAAAACAAG+TGG | 0.579254 | 8_1:-62239451 | Msa1205770:CDS |
| TCTCGTCGTGTATTATACAA+AGG | 0.581355 | 8_1:-62240027 | Msa1205770:CDS |
| TTGGTGTCAGCAAACAGCAT+TGG | 0.581742 | 8_1:-62238611 | Msa1205770:CDS |
| AAACTACGACTTGTAAGAAG+AGG | 0.586665 | 8_1:+62241729 | None:intergenic |
| GATGAACAAACCGTTGCGGT+AGG | 0.589189 | 8_1:-62241383 | Msa1205770:CDS |
| ATGAACAAACCGTTGCGGTA+GGG | 0.589298 | 8_1:-62241382 | Msa1205770:CDS |
| GGCCAACTAATTTCTTCGAG+AGG | 0.591472 | 8_1:-62237937 | Msa1205770:CDS |
| CTGTGTTGTTTAGGGCCGAA+TGG | 0.594102 | 8_1:+62241062 | None:intergenic |
| ACATACATTCACTCTGCTGA+CGG | 0.594247 | 8_1:-62239853 | Msa1205770:CDS |
| TAATGGTAGCCCTACCGCAA+CGG | 0.594866 | 8_1:+62241373 | None:intergenic |
| TTTAGCAGTTTGAGTCTCAG+TGG | 0.599729 | 8_1:+62238457 | None:intergenic |
| TCACTATTGCAAGTTCACCT+GGG | 0.605097 | 8_1:+62238399 | None:intergenic |
| AGTTTGTTCTACTTTCACAA+TGG | 0.606223 | 8_1:-62241294 | Msa1205770:CDS |
| AAGACGGTAAGAATCACTGA+TGG | 0.608281 | 8_1:-62238506 | Msa1205770:CDS |
| CTTGCCACTCATCAACCTCA+AGG | 0.614169 | 8_1:-62241038 | Msa1205770:CDS |
| CACTATTGCAAGTTCACCTG+GGG | 0.620051 | 8_1:+62238400 | None:intergenic |
| CATTAAGCAGTCTAACCTCA+CGG | 0.620479 | 8_1:+62241241 | None:intergenic |
| GAATAGAGACATTGTGAACA+AGG | 0.621351 | 8_1:-62238053 | Msa1205770:CDS |
| CTTTGGTTAAAGGATCAAGC+GGG | 0.622516 | 8_1:+62241681 | None:intergenic |
| GCAAATTGGAAGTTACACAT+AGG | 0.624758 | 8_1:-62240114 | Msa1205770:CDS |
| CATTGTGATGTGGCACGTAG+TGG | 0.626360 | 8_1:-62238029 | Msa1205770:CDS |
| ATTGATGATAGCAATGACAA+AGG | 0.629492 | 8_1:+62241502 | None:intergenic |
| GTAAGGAGTATAGTTACTGT+GGG | 0.630670 | 8_1:-62239493 | Msa1205770:CDS |
| AACAATATAACAATATCATG+TGG | 0.638012 | 8_1:-62239792 | Msa1205770:CDS |
| GGGCATTTGATGGACAATCA+CGG | 0.638441 | 8_1:+62239887 | None:intergenic |
| AATTCTGTGTTCTCATCCGT+AGG | 0.646497 | 8_1:+62241107 | None:intergenic |
| GGGAACAAACATTAAGCACA+AGG | 0.652766 | 8_1:-62238663 | Msa1205770:CDS |
| TCTTTGGTTAAAGGATCAAG+CGG | 0.653437 | 8_1:+62241680 | None:intergenic |
| GTGGATGAGATGGAATTGCT+GGG | 0.655196 | 8_1:+62238327 | None:intergenic |
| AATGCTGTTTGCTGACACCA+AGG | 0.662444 | 8_1:+62238613 | None:intergenic |
| ACCGCGGTCGGAAACGACGT+CGG | 0.669392 | 8_1:-62238362 | Msa1205770:CDS |
| GCAATGACAAAGGCTTTACG+AGG | 0.670561 | 8_1:+62241512 | None:intergenic |
| AGAAAAGTAGTAGGACCGTG+AGG | 0.677701 | 8_1:-62241256 | Msa1205770:CDS |
| GTCTCCGACAATATTCACAA+AGG | 0.679812 | 8_1:-62241431 | Msa1205770:CDS |
| TTGTAAGAAGAGGAGTGTCA+GGG | 0.679903 | 8_1:+62241739 | None:intergenic |
| GAGGTTAAGGAAGATCTACA+TGG | 0.682090 | 8_1:-62238638 | Msa1205770:CDS |
| CAATGACAAAGGCTTTACGA+GGG | 0.683483 | 8_1:+62241513 | None:intergenic |
| ATTGTGATGTGGCACGTAGT+GGG | 0.689785 | 8_1:-62238028 | Msa1205770:CDS |
| GAGAGGATTGAATCTCTCTG+AGG | 0.693702 | 8_1:-62241318 | Msa1205770:CDS |
| AAGTGGTTCCATCAAACCTG+CGG | 0.705775 | 8_1:-62239434 | Msa1205770:intron |
| AGCATTCTTCAAGAGAATCG+GGG | 0.705999 | 8_1:+62239828 | None:intergenic |
| AATGTATGTATCAATGAACT+GGG | 0.711985 | 8_1:+62239867 | None:intergenic |
| AAATGCATTACCTAACACTG+TGG | 0.720465 | 8_1:+62240994 | None:intergenic |
| TGAACAAGGACATTGTGATG+TGG | 0.731915 | 8_1:-62238039 | Msa1205770:CDS |
| TGGACCTTGAGGTTGATGAG+TGG | 0.755738 | 8_1:+62241034 | None:intergenic |
| GATGATTATCCACAAATACG+TGG | 0.767802 | 8_1:-62238293 | Msa1205770:CDS |
| GGTTGATGAACAAACCGTTG+CGG | 0.771723 | 8_1:-62241387 | Msa1205770:CDS |
| CGGGTGTTGAAAATGCAATG+GGG | 0.795860 | 8_1:+62241700 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GCATTTATTTATTTATTTTT+TGG | - | chr8_1:62238638-62238657 | Msa1205770:CDS | 10.0% |
| !! | ACTAGTATTATTATTTATTA+GGG | + | chr8_1:62238804-62238823 | None:intergenic | 10.0% |
| !! | TACTAGTATTATTATTTATT+AGG | + | chr8_1:62238805-62238824 | None:intergenic | 10.0% |
| !!! | GTTTAAAAATAACTTTAAAA+TGG | - | chr8_1:62239334-62239353 | Msa1205770:intron | 10.0% |
| !! | AATAAAAAAAATTAAATCAC+AGG | + | chr8_1:62239414-62239433 | None:intergenic | 10.0% |
| !!! | TTTAATTTTTTTTATTGACT+TGG | - | chr8_1:62239418-62239437 | Msa1205770:intron | 10.0% |
| !! | AGCTATTATATATTTATTTA+TGG | - | chr8_1:62239468-62239487 | Msa1205770:CDS | 10.0% |
| !!! | TCAAATATTATTTTTTTTGA+AGG | + | chr8_1:62239890-62239909 | None:intergenic | 10.0% |
| !!! | ATTTTAGTTATTTTCAATTA+TGG | - | chr8_1:62240259-62240278 | Msa1205770:intron | 10.0% |
| !!! | AACTAAATATTTTTAATTTG+AGG | + | chr8_1:62240470-62240489 | None:intergenic | 10.0% |
| !!! | AAATATTTAGTTTCTTTTTT+AGG | - | chr8_1:62240478-62240497 | Msa1205770:intron | 10.0% |
| !! | AATGTTTCAATATTATTATA+TGG | - | chr8_1:62240891-62240910 | Msa1205770:intron | 10.0% |
| !!! | AAATAATTAATCATACTTTT+TGG | + | chr8_1:62241458-62241477 | None:intergenic | 10.0% |
| !! | AAAAAAATGATATTCTCAAA+TGG | - | chr8_1:62238050-62238069 | Msa1205770:CDS | 15.0% |
| !! | AAAAAATGATATTCTCAAAT+GGG | - | chr8_1:62238051-62238070 | Msa1205770:CDS | 15.0% |
| !!! | ATTTATTTTTTGGTTACATT+TGG | - | chr8_1:62238648-62238667 | Msa1205770:CDS | 15.0% |
| !!! | TAAAAATAACTTTAAAATGG+TGG | - | chr8_1:62239337-62239356 | Msa1205770:intron | 15.0% |
| !! | AATAATATTCAAACTATAGA+TGG | + | chr8_1:62240234-62240253 | None:intergenic | 15.0% |
| !!! | CATGATAAATTTATAGTTTT+TGG | + | chr8_1:62240622-62240641 | None:intergenic | 15.0% |
| !! | AATATTGAAACATTATCAAT+TGG | + | chr8_1:62240885-62240904 | None:intergenic | 15.0% |
| !!! | TTTTACCAATTATAATGTTT+GGG | - | chr8_1:62241348-62241367 | Msa1205770:CDS | 15.0% |
| !! | TTATAATAGAACTGAAAAAT+GGG | - | chr8_1:62241378-62241397 | Msa1205770:CDS | 15.0% |
| !!! | TAGTTGATTTATTTTTACTT+GGG | + | chr8_1:62241755-62241774 | None:intergenic | 15.0% |
| !!! | TGAGAATATCATTTTTTTCA+GGG | + | chr8_1:62238048-62238067 | None:intergenic | 20.0% |
| !!! | TTGAGAATATCATTTTTTTC+AGG | + | chr8_1:62238049-62238068 | None:intergenic | 20.0% |
| !! | TTAAATCAATTACTATCTCA+TGG | + | chr8_1:62238150-62238169 | None:intergenic | 20.0% |
| !!! | ATGAGATAGTAATTGATTTA+AGG | - | chr8_1:62238149-62238168 | Msa1205770:intron | 20.0% |
| !! | TTTGTCTAATGAGTAAAAAA+GGG | + | chr8_1:62239103-62239122 | None:intergenic | 20.0% |
| !!! | TTTTTTACTCATTAGACAAA+GGG | - | chr8_1:62239103-62239122 | Msa1205770:intron | 20.0% |
| !! | TATTTATTTATGGATTTAGC+TGG | - | chr8_1:62239478-62239497 | Msa1205770:CDS | 20.0% |
| !! | ATTTATTTATGGATTTAGCT+GGG | - | chr8_1:62239479-62239498 | Msa1205770:CDS | 20.0% |
| !! | AACAATATAACAATATCATG+TGG | - | chr8_1:62239823-62239842 | Msa1205770:CDS | 20.0% |
| !! | TGTATAGTTTCAACAAAAAA+TGG | - | chr8_1:62240206-62240225 | Msa1205770:intron | 20.0% |
| !!! | AGATTTTCTTTCAATAAAAG+TGG | + | chr8_1:62240598-62240617 | None:intergenic | 20.0% |
| !! | TTACTCCATTATATTAAAGT+GGG | + | chr8_1:62240706-62240725 | None:intergenic | 20.0% |
| !!! | CTTTTACCAATTATAATGTT+TGG | - | chr8_1:62241347-62241366 | Msa1205770:CDS | 20.0% |
| !!! | CATTTTTCAGTTCTATTATA+AGG | + | chr8_1:62241379-62241398 | None:intergenic | 20.0% |
| !! | CTTATAATAGAACTGAAAAA+TGG | - | chr8_1:62241377-62241396 | Msa1205770:CDS | 20.0% |
| !!! | AGTTGATTTATTTTTACTTG+GGG | + | chr8_1:62241754-62241773 | None:intergenic | 20.0% |
| !!! | CTAGTTGATTTATTTTTACT+TGG | + | chr8_1:62241756-62241775 | None:intergenic | 20.0% |
| !!! | GAAAAGCGTAAATTTTATTG+TGG | + | chr8_1:62237852-62237871 | None:intergenic | 25.0% |
| !! | AAAGTAGCTTTTCACTATAT+TGG | - | chr8_1:62238013-62238032 | Msa1205770:CDS | 25.0% |
| !!! | ATGAAAGGAGGATATTTTAA+TGG | + | chr8_1:62238262-62238281 | None:intergenic | 25.0% |
| !! | TTTTTCATTGATGCAATGAA+AGG | + | chr8_1:62238277-62238296 | None:intergenic | 25.0% |
| ! | AATAGGCCTAACATATATAT+TGG | + | chr8_1:62238413-62238432 | None:intergenic | 25.0% |
| ! | ACAATTGTAATTCCAGTAAT+AGG | + | chr8_1:62238430-62238449 | None:intergenic | 25.0% |
| !!! | TATTTTTTGGTTACATTTGG+TGG | - | chr8_1:62238651-62238670 | Msa1205770:CDS | 25.0% |
| !!! | ATTTTTTGGTTACATTTGGT+GGG | - | chr8_1:62238652-62238671 | Msa1205770:CDS | 25.0% |
| ! | AATTTAGAAAAATAACACCG+TGG | - | chr8_1:62238691-62238710 | Msa1205770:CDS | 25.0% |
| !!! | TTTTTATTTGTTGTCAACCA+CGG | + | chr8_1:62238711-62238730 | None:intergenic | 25.0% |
| ! | CTTTGTCTAATGAGTAAAAA+AGG | + | chr8_1:62239104-62239123 | None:intergenic | 25.0% |
| !!! | CTTTTTTACTCATTAGACAA+AGG | - | chr8_1:62239102-62239121 | Msa1205770:intron | 25.0% |
| !!! | CTCTATTAGAAGAGTTTTAA+TGG | - | chr8_1:62239243-62239262 | Msa1205770:intron | 25.0% |
| !! | TTTTAATGGAGATGAATTAC+AGG | - | chr8_1:62239257-62239276 | Msa1205770:intron | 25.0% |
| ! | GTTTACATGATATTATCATG+AGG | + | chr8_1:62239299-62239318 | None:intergenic | 25.0% |
| !!! | TTTTTTTATTGACTTGGACA+TGG | - | chr8_1:62239424-62239443 | Msa1205770:intron | 25.0% |
| !! | TTTAAGACTTTCTTTGATGT+TGG | - | chr8_1:62239663-62239682 | Msa1205770:intron | 25.0% |
| ! | AATGTATGTATCAATGAACT+GGG | + | chr8_1:62239751-62239770 | None:intergenic | 25.0% |
| ! | AAAAAATCAATTGTGAGTAG+TGG | - | chr8_1:62239940-62239959 | Msa1205770:CDS | 25.0% |
| ! | TATGAATTTGCATACACTAT+TGG | + | chr8_1:62239986-62240005 | None:intergenic | 25.0% |
| !!! | TACTAGTATGTTTTTTCTTG+TGG | - | chr8_1:62240284-62240303 | Msa1205770:intron | 25.0% |
| !! | TGATGAGATTAACTTTTATG+CGG | - | chr8_1:62240329-62240348 | Msa1205770:intron | 25.0% |
| ! | AGGTCATTTAAATGCTTAAT+TGG | - | chr8_1:62240656-62240675 | Msa1205770:intron | 25.0% |
| ! | GTTACTCCATTATATTAAAG+TGG | + | chr8_1:62240707-62240726 | None:intergenic | 25.0% |
| !! | CTTTAATATAATGGAGTAAC+TGG | - | chr8_1:62240707-62240726 | Msa1205770:intron | 25.0% |
| !! | TTTTAACATCAAAGAGTCTT+TGG | - | chr8_1:62240753-62240772 | Msa1205770:intron | 25.0% |
| ! | ATATTGGGTTACTTATATCT+TGG | + | chr8_1:62240816-62240835 | None:intergenic | 25.0% |
| ! | CAAGATAGTAAATGTATAAG+TGG | + | chr8_1:62241042-62241061 | None:intergenic | 25.0% |
| ! | AAGCGTAAATTTTATTGTGG+TGG | + | chr8_1:62237849-62237868 | None:intergenic | 30.0% |
| GAATACTCTTCTTTGGTTAA+AGG | + | chr8_1:62237947-62237966 | None:intergenic | 30.0% | |
| ! | AAAAGCTACTTTGTTCTTTG+AGG | + | chr8_1:62238005-62238024 | None:intergenic | 30.0% |
| GATTGTTATAACACTTGGTT+CGG | + | chr8_1:62238083-62238102 | None:intergenic | 30.0% | |
| ! | ATTGATGATAGCAATGACAA+AGG | + | chr8_1:62238116-62238135 | None:intergenic | 30.0% |
| ATTGCCTTTGTGAATATTGT+CGG | + | chr8_1:62238191-62238210 | None:intergenic | 30.0% | |
| ATTGCATCAATGAAAAAGAG+AGG | - | chr8_1:62238280-62238299 | Msa1205770:CDS | 30.0% | |
| ! | AGTTTGTTCTACTTTCACAA+TGG | - | chr8_1:62238321-62238340 | Msa1205770:CDS | 30.0% |
| GTTTGTTCTACTTTCACAAT+GGG | - | chr8_1:62238322-62238341 | Msa1205770:CDS | 30.0% | |
| ACACTGCCAATATATATGTT+AGG | - | chr8_1:62238404-62238423 | Msa1205770:CDS | 30.0% | |
| ATATATGTTAGGCCTATTAC+TGG | - | chr8_1:62238415-62238434 | Msa1205770:CDS | 30.0% | |
| AAAAGTCAAATTGTACCCAA+AGG | - | chr8_1:62239049-62239068 | Msa1205770:intron | 30.0% | |
| TACCCAAAGGATTTAAATGA+AGG | - | chr8_1:62239062-62239081 | Msa1205770:intron | 30.0% | |
| ACCCAAAGGATTTAAATGAA+GGG | - | chr8_1:62239063-62239082 | Msa1205770:intron | 30.0% | |
| TTAAAGTAAAACTCGTCTGA+TGG | + | chr8_1:62239648-62239667 | None:intergenic | 30.0% | |
| GAATGTATGTATCAATGAAC+TGG | + | chr8_1:62239752-62239771 | None:intergenic | 30.0% | |
| ATAGCATTCTTCAAGAGAAT+CGG | + | chr8_1:62239792-62239811 | None:intergenic | 30.0% | |
| CCTTACTATCAAGTTTACTT+CGG | + | chr8_1:62240108-62240127 | None:intergenic | 30.0% | |
| ! | TTTTCTTGTGGTATGAATGA+TGG | - | chr8_1:62240296-62240315 | Msa1205770:intron | 30.0% |
| TTTCTTGTGGTATGAATGAT+GGG | - | chr8_1:62240297-62240316 | Msa1205770:intron | 30.0% | |
| !!! | GTATGAATGATGGGTTTTTT+AGG | - | chr8_1:62240306-62240325 | Msa1205770:intron | 30.0% |
| TAGCTCCCACTTTAATATAA+TGG | - | chr8_1:62240698-62240717 | Msa1205770:intron | 30.0% | |
| AATATAAAGCATGTGTCTCA+CGG | + | chr8_1:62240734-62240753 | None:intergenic | 30.0% | |
| AACCACGTGTTAAACATATT+GGG | + | chr8_1:62240831-62240850 | None:intergenic | 30.0% | |
| AAACCACGTGTTAAACATAT+TGG | + | chr8_1:62240832-62240851 | None:intergenic | 30.0% | |
| TTCAGGTATACTGGAAATTA+AGG | - | chr8_1:62240931-62240950 | Msa1205770:intron | 30.0% | |
| TCAGGTATACTGGAAATTAA+GGG | - | chr8_1:62240932-62240951 | Msa1205770:intron | 30.0% | |
| TATCTTGACCTTGATATTGA+TGG | - | chr8_1:62241055-62241074 | Msa1205770:CDS | 30.0% | |
| TGTTTGTACCATCAATATCA+AGG | + | chr8_1:62241066-62241085 | None:intergenic | 30.0% | |
| CGAGAAAACAAGTTTAAAGA+CGG | - | chr8_1:62241093-62241112 | Msa1205770:CDS | 30.0% | |
| GTTCAAAGAGAAAGAGTTAT+TGG | - | chr8_1:62241134-62241153 | Msa1205770:CDS | 30.0% | |
| TCAGATGCAAAAATCACAAT+TGG | - | chr8_1:62241187-62241206 | Msa1205770:CDS | 30.0% | |
| TAATCATCCTCAGTTAAAAG+TGG | + | chr8_1:62241310-62241329 | None:intergenic | 30.0% | |
| TGTGACCCAAACATTATAAT+TGG | + | chr8_1:62241356-62241375 | None:intergenic | 30.0% | |
| ATTAAAATGTACGTTTGCAC+AGG | - | chr8_1:62241540-62241559 | Msa1205770:CDS | 30.0% | |
| GTGCTTAATATTGGCATTAT+GGG | + | chr8_1:62241644-62241663 | None:intergenic | 30.0% | |
| AGTGCTTAATATTGGCATTA+TGG | + | chr8_1:62241645-62241664 | None:intergenic | 30.0% | |
| TCAAAAGCAGTGCTTAATAT+TGG | + | chr8_1:62241653-62241672 | None:intergenic | 30.0% | |
| AAACTACGACTTGTAAGAAG+AGG | + | chr8_1:62237889-62237908 | None:intergenic | 35.0% | |
| TCTTTGGTTAAAGGATCAAG+CGG | + | chr8_1:62237938-62237957 | None:intergenic | 35.0% | |
| GACAAGAGAATACTCTTCTT+TGG | + | chr8_1:62237954-62237973 | None:intergenic | 35.0% | |
| ATTTGTGCATGACTGTTGTT+TGG | + | chr8_1:62237976-62237995 | None:intergenic | 35.0% | |
| GACAATATTCACAAAGGCAA+TGG | - | chr8_1:62238190-62238209 | Msa1205770:CDS | 35.0% | |
| TTCATTGATGCAATGAAAGG+AGG | + | chr8_1:62238274-62238293 | None:intergenic | 35.0% | |
| ATGGAGAAGAGAAAAGTAGT+AGG | - | chr8_1:62238350-62238369 | Msa1205770:CDS | 35.0% | |
| GGATGAGAACACAGAATTTA+GGG | - | chr8_1:62238513-62238532 | Msa1205770:CDS | 35.0% | |
| AAATGCATTACCTAACACTG+TGG | + | chr8_1:62238624-62238643 | None:intergenic | 35.0% | |
| GCCCTTCATTTAAATCCTTT+GGG | + | chr8_1:62239067-62239086 | None:intergenic | 35.0% | |
| !! | TTAAAATGGTGGATGTCATC+AGG | - | chr8_1:62239348-62239367 | Msa1205770:intron | 35.0% |
| GCAAATTGGAAGTTACACAT+AGG | - | chr8_1:62239501-62239520 | Msa1205770:CDS | 35.0% | |
| AGCTGGAGTGATATTATCAT+TGG | - | chr8_1:62239536-62239555 | Msa1205770:intron | 35.0% | |
| TCTCGTCGTGTATTATACAA+AGG | - | chr8_1:62239588-62239607 | Msa1205770:intron | 35.0% | |
| CTCGTCGTGTATTATACAAA+GGG | - | chr8_1:62239589-62239608 | Msa1205770:intron | 35.0% | |
| TAGCATTCTTCAAGAGAATC+GGG | + | chr8_1:62239791-62239810 | None:intergenic | 35.0% | |
| TACGAATTCATTAGGAATGC+CGG | + | chr8_1:62239862-62239881 | None:intergenic | 35.0% | |
| AGGAGTCTTACGAATTCATT+AGG | + | chr8_1:62239870-62239889 | None:intergenic | 35.0% | |
| ! | CCGAAGTAAACTTGATAGTA+AGG | - | chr8_1:62240105-62240124 | Msa1205770:CDS | 35.0% |
| ! | AGTAAGGAGTATAGTTACTG+TGG | - | chr8_1:62240121-62240140 | Msa1205770:CDS | 35.0% |
| ! | GTAAGGAGTATAGTTACTGT+GGG | - | chr8_1:62240122-62240141 | Msa1205770:intron | 35.0% |
| ACTATGACAACGTTGTAGAT+TGG | - | chr8_1:62240147-62240166 | Msa1205770:intron | 35.0% | |
| CTATGACAACGTTGTAGATT+GGG | - | chr8_1:62240148-62240167 | Msa1205770:intron | 35.0% | |
| GTAATCAAATCACGCTATAG+AGG | - | chr8_1:62240427-62240446 | Msa1205770:intron | 35.0% | |
| AACCCAATATGTTTAACACG+TGG | - | chr8_1:62240826-62240845 | Msa1205770:intron | 35.0% | |
| AAACATTAAGCACAAGGATG+AGG | - | chr8_1:62240958-62240977 | Msa1205770:intron | 35.0% | |
| AGTAAATGTATAAGTGGTCG+TGG | + | chr8_1:62241036-62241055 | None:intergenic | 35.0% | |
| GAATCCAAACAAAAAAACCG+CGG | - | chr8_1:62241237-62241256 | Msa1205770:CDS | 35.0% | |
| TCAGTTAAAAGTGGATGAGA+TGG | + | chr8_1:62241301-62241320 | None:intergenic | 35.0% | |
| !! | ATCTCATCCACTTTTAACTG+AGG | - | chr8_1:62241300-62241319 | Msa1205770:CDS | 35.0% |
| GATGATTATCCACAAATACG+TGG | - | chr8_1:62241322-62241341 | Msa1205770:CDS | 35.0% | |
| AATAGAACTGAAAAATGGGC+TGG | - | chr8_1:62241382-62241401 | Msa1205770:CDS | 35.0% | |
| GAGAAGATACTTTAGCTGTT+TGG | - | chr8_1:62241431-62241450 | Msa1205770:CDS | 35.0% | |
| GAATAGAGACATTGTGAACA+AGG | - | chr8_1:62241562-62241581 | Msa1205770:CDS | 35.0% | |
| TTCCTCTCGAAGAAATTAGT+TGG | + | chr8_1:62241683-62241702 | None:intergenic | 35.0% | |
| !! | TTGTAAGAAGAGGAGTGTCA+GGG | + | chr8_1:62237879-62237898 | None:intergenic | 40.0% |
| CTTTGGTTAAAGGATCAAGC+GGG | + | chr8_1:62237937-62237956 | None:intergenic | 40.0% | |
| !! | GCTACTTTGTTCTTTGAGGT+GGG | + | chr8_1:62238001-62238020 | None:intergenic | 40.0% |
| ! | AGCTACTTTGTTCTTTGAGG+TGG | + | chr8_1:62238002-62238021 | None:intergenic | 40.0% |
| CGAGGGATTGTTATAACACT+TGG | + | chr8_1:62238088-62238107 | None:intergenic | 40.0% | |
| CAATGACAAAGGCTTTACGA+GGG | + | chr8_1:62238105-62238124 | None:intergenic | 40.0% | |
| GTCTCCGACAATATTCACAA+AGG | - | chr8_1:62238184-62238203 | Msa1205770:CDS | 40.0% | |
| GTTCTACTTTCACAATGGGA+TGG | - | chr8_1:62238326-62238345 | Msa1205770:CDS | 40.0% | |
| ACTTTCACAATGGGATGGTA+TGG | - | chr8_1:62238331-62238350 | Msa1205770:CDS | 40.0% | |
| CATTAAGCAGTCTAACCTCA+CGG | + | chr8_1:62238377-62238396 | None:intergenic | 40.0% | |
| AGTTATTGAAGCTGTGCCTA+CGG | - | chr8_1:62238492-62238511 | Msa1205770:CDS | 40.0% | |
| AATTCTGTGTTCTCATCCGT+AGG | + | chr8_1:62238511-62238530 | None:intergenic | 40.0% | |
| CGGATGAGAACACAGAATTT+AGG | - | chr8_1:62238512-62238531 | Msa1205770:CDS | 40.0% | |
| !! | TGGCAAGACTGTGTTGTTTA+GGG | + | chr8_1:62238564-62238583 | None:intergenic | 40.0% |
| CGCCCTTCATTTAAATCCTT+TGG | + | chr8_1:62239068-62239087 | None:intergenic | 40.0% | |
| ATGGATTTAGCTGGGCAAAT+TGG | - | chr8_1:62239487-62239506 | Msa1205770:CDS | 40.0% | |
| ! | AAAACTCGTCTGATGGATCT+TGG | + | chr8_1:62239641-62239660 | None:intergenic | 40.0% |
| TTCTTTGATGTTGGCGAGTA+TGG | - | chr8_1:62239672-62239691 | Msa1205770:intron | 40.0% | |
| ! | TTTGATGGACAATCACGGTT+GGG | + | chr8_1:62239726-62239745 | None:intergenic | 40.0% |
| ! | ATTTGATGGACAATCACGGT+TGG | + | chr8_1:62239727-62239746 | None:intergenic | 40.0% |
| TCAATGAACTGGGCATTTGA+TGG | + | chr8_1:62239741-62239760 | None:intergenic | 40.0% | |
| ACATACATTCACTCTGCTGA+CGG | - | chr8_1:62239762-62239781 | Msa1205770:CDS | 40.0% | |
| AGCATTCTTCAAGAGAATCG+GGG | + | chr8_1:62239790-62239809 | None:intergenic | 40.0% | |
| GATTGGGAGTTCAAAACAAG+TGG | - | chr8_1:62240164-62240183 | Msa1205770:intron | 40.0% | |
| TATACATACCGCAGGTTTGA+TGG | + | chr8_1:62240192-62240211 | None:intergenic | 40.0% | |
| GTTGAAACTATACATACCGC+AGG | + | chr8_1:62240200-62240219 | None:intergenic | 40.0% | |
| ! | TGAGCTTAGCTTAGTTGGTA+GGG | - | chr8_1:62240397-62240416 | Msa1205770:intron | 40.0% |
| AGCATTTAAATGACCTGCGT+GGG | + | chr8_1:62240652-62240671 | None:intergenic | 40.0% | |
| AAGCATTTAAATGACCTGCG+TGG | + | chr8_1:62240653-62240672 | None:intergenic | 40.0% | |
| AGCATACAGATAGCACTTTC+AGG | - | chr8_1:62240914-62240933 | Msa1205770:intron | 40.0% | |
| ! | GATAGCACTTTCAGGTATAC+TGG | - | chr8_1:62240922-62240941 | Msa1205770:intron | 40.0% |
| GGGAACAAACATTAAGCACA+AGG | - | chr8_1:62240952-62240971 | Msa1205770:intron | 40.0% | |
| TAAGCACAAGGATGAGGTTA+AGG | - | chr8_1:62240964-62240983 | Msa1205770:intron | 40.0% | |
| GAGGTTAAGGAAGATCTACA+TGG | - | chr8_1:62240977-62240996 | Msa1205770:intron | 40.0% | |
| AAGACGGTAAGAATCACTGA+TGG | - | chr8_1:62241109-62241128 | Msa1205770:CDS | 40.0% | |
| TTTAGCAGTTTGAGTCTCAG+TGG | + | chr8_1:62241161-62241180 | None:intergenic | 40.0% | |
| TCACTATTGCAAGTTCACCT+GGG | + | chr8_1:62241219-62241238 | None:intergenic | 40.0% | |
| TTCACTATTGCAAGTTCACC+TGG | + | chr8_1:62241220-62241239 | None:intergenic | 40.0% | |
| ATGGAATTGCTGGGATCAAA+CGG | + | chr8_1:62241282-62241301 | None:intergenic | 40.0% | |
| !! | GTAAAAGCACCACGTATTTG+TGG | + | chr8_1:62241334-62241353 | None:intergenic | 40.0% |
| CTCTATGTTGATCATAGCCA+TGG | - | chr8_1:62241409-62241428 | Msa1205770:CDS | 40.0% | |
| ! | CAGCTAAAGTATCTTCTCCA+TGG | + | chr8_1:62241429-62241448 | None:intergenic | 40.0% |
| TGAACAAGGACATTGTGATG+TGG | - | chr8_1:62241576-62241595 | Msa1205770:CDS | 40.0% | |
| ATGGGAAAATCTTCTTGTGC+TGG | + | chr8_1:62241626-62241645 | None:intergenic | 40.0% | |
| !! | GGAGAAAGTGTCTTAAGAAC+TGG | + | chr8_1:62241707-62241726 | None:intergenic | 40.0% |
| TTTCTCCCAGAGATGTTACA+TGG | - | chr8_1:62241720-62241739 | Msa1205770:CDS | 40.0% | |
| !! | TATTTTTACTTGGGGCAACC+AGG | + | chr8_1:62241746-62241765 | None:intergenic | 40.0% |
| !! | CTTGTAAGAAGAGGAGTGTC+AGG | + | chr8_1:62237880-62237899 | None:intergenic | 45.0% |
| !! | CGGGTGTTGAAAATGCAATG+GGG | + | chr8_1:62237918-62237937 | None:intergenic | 45.0% |
| !! | GCGGGTGTTGAAAATGCAAT+GGG | + | chr8_1:62237919-62237938 | None:intergenic | 45.0% |
| !! | AGCGGGTGTTGAAAATGCAA+TGG | + | chr8_1:62237920-62237939 | None:intergenic | 45.0% |
| GCAATGACAAAGGCTTTACG+AGG | + | chr8_1:62238106-62238125 | None:intergenic | 45.0% | |
| CAATGGTTTCCCAACACTCT+CGG | - | chr8_1:62238207-62238226 | Msa1205770:CDS | 45.0% | |
| !! | GTTCATCAACCGAGAGTGTT+GGG | + | chr8_1:62238219-62238238 | None:intergenic | 45.0% |
| ! | TGTTCATCAACCGAGAGTGT+TGG | + | chr8_1:62238220-62238239 | None:intergenic | 45.0% |
| !! | GGTTGATGAACAAACCGTTG+CGG | - | chr8_1:62238228-62238247 | Msa1205770:CDS | 45.0% |
| ATGAACAAACCGTTGCGGTA+GGG | - | chr8_1:62238233-62238252 | Msa1205770:CDS | 45.0% | |
| GAGAGGATTGAATCTCTCTG+AGG | - | chr8_1:62238297-62238316 | Msa1205770:CDS | 45.0% | |
| AGAAAAGTAGTAGGACCGTG+AGG | - | chr8_1:62238359-62238378 | Msa1205770:CDS | 45.0% | |
| TCACATCAGAGCCAACCATT+CGG | - | chr8_1:62238538-62238557 | Msa1205770:CDS | 45.0% | |
| !! | GTGGCAAGACTGTGTTGTTT+AGG | + | chr8_1:62238565-62238584 | None:intergenic | 45.0% |
| TAACACTGTGGCCATTGATC+TGG | + | chr8_1:62238612-62238631 | None:intergenic | 45.0% | |
| AGATCAATGGCCACAGTGTT+AGG | - | chr8_1:62238611-62238630 | Msa1205770:CDS | 45.0% | |
| ATAGGATTTGATGTGCGAGC+TGG | - | chr8_1:62239519-62239538 | Msa1205770:CDS | 45.0% | |
| ! | TCGTCTGATGGATCTTGGTA+TGG | + | chr8_1:62239636-62239655 | None:intergenic | 45.0% |
| GATGTTGGCGAGTATGGATT+TGG | - | chr8_1:62239678-62239697 | Msa1205770:intron | 45.0% | |
| ! | GGGCATTTGATGGACAATCA+CGG | + | chr8_1:62239731-62239750 | None:intergenic | 45.0% |
| AAGTGGTTCCATCAAACCTG+CGG | - | chr8_1:62240181-62240200 | Msa1205770:intron | 45.0% | |
| CATCGTGAGCTTAGCTTAGT+TGG | - | chr8_1:62240392-62240411 | Msa1205770:intron | 45.0% | |
| GTGAGCTTAGCTTAGTTGGT+AGG | - | chr8_1:62240396-62240415 | Msa1205770:intron | 45.0% | |
| TTTAAATGACCTGCGTGGGT+GGG | + | chr8_1:62240648-62240667 | None:intergenic | 45.0% | |
| ATTTAAATGACCTGCGTGGG+TGG | + | chr8_1:62240649-62240668 | None:intergenic | 45.0% | |
| GGAAGATCTACATGGTACCT+TGG | - | chr8_1:62240985-62241004 | Msa1205770:intron | 45.0% | |
| ! | AATGCTGTTTGCTGACACCA+AGG | + | chr8_1:62241005-62241024 | None:intergenic | 45.0% |
| !! | TTGGTGTCAGCAAACAGCAT+TGG | - | chr8_1:62241004-62241023 | Msa1205770:intron | 45.0% |
| ATCACAATTGGACTTTCCCC+AGG | - | chr8_1:62241199-62241218 | Msa1205770:CDS | 45.0% | |
| CACTATTGCAAGTTCACCTG+GGG | + | chr8_1:62241218-62241237 | None:intergenic | 45.0% | |
| CCAAACAAAAAAACCGCGGT+CGG | - | chr8_1:62241241-62241260 | Msa1205770:CDS | 45.0% | |
| GTGGATGAGATGGAATTGCT+GGG | + | chr8_1:62241291-62241310 | None:intergenic | 45.0% | |
| AGTGGATGAGATGGAATTGC+TGG | + | chr8_1:62241292-62241311 | None:intergenic | 45.0% | |
| !! | AGAACTGAAAAATGGGCTGG+TGG | - | chr8_1:62241385-62241404 | Msa1205770:CDS | 45.0% |
| ATTGTGATGTGGCACGTAGT+GGG | - | chr8_1:62241587-62241606 | Msa1205770:CDS | 45.0% | |
| !! | TAAGCACTGCTTTTGAGCTG+AGG | - | chr8_1:62241657-62241676 | Msa1205770:CDS | 45.0% |
| GGCCAACTAATTTCTTCGAG+AGG | - | chr8_1:62241678-62241697 | Msa1205770:CDS | 45.0% | |
| GATGAACAAACCGTTGCGGT+AGG | - | chr8_1:62238232-62238251 | Msa1205770:CDS | 50.0% | |
| TAATGGTAGCCCTACCGCAA+CGG | + | chr8_1:62238245-62238264 | None:intergenic | 50.0% | |
| ! | GTTGTTTAGGGCCGAATGGT+TGG | + | chr8_1:62238552-62238571 | None:intergenic | 50.0% |
| !! | CTGTGTTGTTTAGGGCCGAA+TGG | + | chr8_1:62238556-62238575 | None:intergenic | 50.0% |
| CTTGCCACTCATCAACCTCA+AGG | - | chr8_1:62238577-62238596 | Msa1205770:CDS | 50.0% | |
| !! | TGGACCTTGAGGTTGATGAG+TGG | + | chr8_1:62238584-62238603 | None:intergenic | 50.0% |
| ACTCATCAACCTCAAGGTCC+AGG | - | chr8_1:62238583-62238602 | Msa1205770:CDS | 50.0% | |
| ATGTGGCGTCACACTGAAAC+CGG | - | chr8_1:62239840-62239859 | Msa1205770:CDS | 50.0% | |
| TTAAATGACCTGCGTGGGTG+GGG | + | chr8_1:62240647-62240666 | None:intergenic | 50.0% | |
| !!! | CCGACCGCGGTTTTTTTGTT+TGG | + | chr8_1:62241244-62241263 | None:intergenic | 50.0% |
| CATTGTGATGTGGCACGTAG+TGG | - | chr8_1:62241586-62241605 | Msa1205770:CDS | 50.0% | |
| CCAGGCCATGTAACATCTCT+GGG | + | chr8_1:62241728-62241747 | None:intergenic | 50.0% | |
| ACCAGGCCATGTAACATCTC+TGG | + | chr8_1:62241729-62241748 | None:intergenic | 50.0% | |
| ATCTGGAAGCCTGGACCTTG+AGG | + | chr8_1:62238595-62238614 | None:intergenic | 55.0% | |
| GGTCCAGGCTTCCAGATCAA+TGG | - | chr8_1:62238598-62238617 | Msa1205770:CDS | 55.0% | |
| TGGCCATTGATCTGGAAGCC+TGG | + | chr8_1:62238604-62238623 | None:intergenic | 55.0% | |
| CCCAGAGATGTTACATGGCC+TGG | - | chr8_1:62241725-62241744 | Msa1205770:CDS | 55.0% | |
| ATCATGTACCCCACCCACGC+AGG | - | chr8_1:62240636-62240655 | Msa1205770:intron | 60.0% | |
| ACCGCGGTCGGAAACGACGT+CGG | - | chr8_1:62241253-62241272 | Msa1205770:CDS | 65.0% | |
| TCCGACGTCGTTTCCGACCG+CGG | + | chr8_1:62241257-62241276 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 62237839 | 62241798 | 62237839 | ID=Msa1205770;Name=Msa1205770 |
| chr8_1 | mRNA | 62237839 | 62241798 | 62237839 | ID=Msa1205770-mRNA-1;Parent=Msa1205770;Name=Msa1205770-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|1|0.6|1|1|1|5|38|675 |
| chr8_1 | exon | 62237839 | 62238075 | 62237839 | ID=Msa1205770-mRNA-1:exon:20185;Parent=Msa1205770-mRNA-1 |
| chr8_1 | exon | 62238176 | 62238714 | 62238176 | ID=Msa1205770-mRNA-1:exon:20184;Parent=Msa1205770-mRNA-1 |
| chr8_1 | exon | 62239435 | 62239548 | 62239435 | ID=Msa1205770-mRNA-1:exon:20183;Parent=Msa1205770-mRNA-1 |
| chr8_1 | exon | 62239759 | 62240140 | 62239759 | ID=Msa1205770-mRNA-1:exon:20182;Parent=Msa1205770-mRNA-1 |
| chr8_1 | exon | 62241005 | 62241798 | 62241005 | ID=Msa1205770-mRNA-1:exon:20181;Parent=Msa1205770-mRNA-1 |
| chr8_1 | CDS | 62241005 | 62241798 | 62241005 | ID=Msa1205770-mRNA-1:cds;Parent=Msa1205770-mRNA-1 |
| chr8_1 | CDS | 62239759 | 62240140 | 62239759 | ID=Msa1205770-mRNA-1:cds;Parent=Msa1205770-mRNA-1 |
| chr8_1 | CDS | 62239435 | 62239548 | 62239435 | ID=Msa1205770-mRNA-1:cds;Parent=Msa1205770-mRNA-1 |
| chr8_1 | CDS | 62238176 | 62238714 | 62238176 | ID=Msa1205770-mRNA-1:cds;Parent=Msa1205770-mRNA-1 |
| chr8_1 | CDS | 62237877 | 62238075 | 62237877 | ID=Msa1205770-mRNA-1:cds;Parent=Msa1205770-mRNA-1 |
| chr8_1 | three_prime_UTR | 62237839 | 62237876 | 62237839 | ID=Msa1205770-mRNA-1:three_prime_utr;Parent=Msa1205770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
