Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0569900 | XP_003630404.1 | 90.929 | 463 | 4 | 4 | 1 | 463 | 1 | 425 | 0.0 | 810 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0569900 | sp|A4YGN0|SUCD_METS5 | 40.199 | 403 | 197 | 5 | 58 | 460 | 1 | 359 | 4.38e-79 | 253 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0569900 | G7LFT6 | 90.929 | 463 | 4 | 4 | 1 | 463 | 1 | 425 | 0.0 | 810 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006080 | Msa0569900 | 0.842421 | 2.613396e-58 | -8.615850e-47 |
| Msa0007810 | Msa0569900 | -0.848219 | 7.045804e-60 | -8.615850e-47 |
| Msa0013270 | Msa0569900 | 0.802468 | 5.530089e-49 | -8.615850e-47 |
| Msa0030050 | Msa0569900 | 0.812720 | 3.678911e-51 | -8.615850e-47 |
| Msa0037180 | Msa0569900 | 0.843332 | 1.495179e-58 | -8.615850e-47 |
| Msa0042520 | Msa0569900 | -0.801106 | 1.052930e-48 | -8.615850e-47 |
| Msa0056230 | Msa0569900 | -0.852467 | 4.528680e-61 | -8.615850e-47 |
| Msa0062190 | Msa0569900 | 0.818704 | 1.705621e-52 | -8.615850e-47 |
| Msa0075990 | Msa0569900 | -0.812984 | 3.218955e-51 | -8.615850e-47 |
| Msa0081700 | Msa0569900 | -0.810825 | 9.508140e-51 | -8.615850e-47 |
| Msa0092220 | Msa0569900 | 0.841167 | 5.598275e-58 | -8.615850e-47 |
| Msa0098500 | Msa0569900 | -0.803081 | 4.131935e-49 | -8.615850e-47 |
| Msa0099090 | Msa0569900 | -0.817925 | 2.560196e-52 | -8.615850e-47 |
| Msa0106540 | Msa0569900 | 0.800760 | 1.239115e-48 | -8.615850e-47 |
| Msa0127220 | Msa0569900 | -0.819638 | 1.045812e-52 | -8.615850e-47 |
| Msa0127350 | Msa0569900 | -0.809394 | 1.933960e-50 | -8.615850e-47 |
| Msa0127910 | Msa0569900 | -0.820001 | 8.637789e-53 | -8.615850e-47 |
| Msa0132080 | Msa0569900 | -0.800333 | 1.513764e-48 | -8.615850e-47 |
| Msa0141410 | Msa0569900 | 0.801882 | 7.301523e-49 | -8.615850e-47 |
| Msa0159240 | Msa0569900 | -0.802851 | 4.610932e-49 | -8.615850e-47 |
| Msa0174060 | Msa0569900 | -0.809398 | 1.930353e-50 | -8.615850e-47 |
| Msa0177320 | Msa0569900 | 0.824289 | 8.747917e-54 | -8.615850e-47 |
| Msa0183960 | Msa0569900 | -0.810845 | 9.414340e-51 | -8.615850e-47 |
| Msa0186400 | Msa0569900 | -0.841989 | 3.400407e-58 | -8.615850e-47 |
| Msa0210790 | Msa0569900 | 0.811465 | 6.907803e-51 | -8.615850e-47 |
| Msa0216150 | Msa0569900 | -0.842989 | 1.846418e-58 | -8.615850e-47 |
| Msa0225070 | Msa0569900 | -0.813750 | 2.185085e-51 | -8.615850e-47 |
| Msa0232660 | Msa0569900 | -0.821343 | 4.247742e-53 | -8.615850e-47 |
| Msa0364910 | Msa0569900 | -0.814633 | 1.394999e-51 | -8.615850e-47 |
| Msa0371350 | Msa0569900 | -0.814718 | 1.335988e-51 | -8.615850e-47 |
| Msa0385280 | Msa0569900 | -0.804892 | 1.736686e-49 | -8.615850e-47 |
| Msa0390590 | Msa0569900 | -0.819512 | 1.116977e-52 | -8.615850e-47 |
| Msa0403740 | Msa0569900 | -0.843295 | 1.530226e-58 | -8.615850e-47 |
| Msa0412580 | Msa0569900 | -0.845248 | 4.570292e-59 | -8.615850e-47 |
| Msa0415760 | Msa0569900 | -0.800617 | 1.325124e-48 | -8.615850e-47 |
| Msa0419420 | Msa0569900 | -0.823779 | 1.152766e-53 | -8.615850e-47 |
| Msa0450890 | Msa0569900 | -0.816776 | 4.645197e-52 | -8.615850e-47 |
| Msa0456450 | Msa0569900 | -0.838204 | 3.303751e-57 | -8.615850e-47 |
| Msa0457070 | Msa0569900 | -0.839255 | 1.767352e-57 | -8.615850e-47 |
| Msa0459930 | Msa0569900 | 0.800460 | 1.426425e-48 | -8.615850e-47 |
| Msa0240590 | Msa0569900 | -0.801659 | 8.112645e-49 | -8.615850e-47 |
| Msa0253230 | Msa0569900 | -0.800823 | 1.202747e-48 | -8.615850e-47 |
| Msa0256540 | Msa0569900 | 0.807152 | 5.811029e-50 | -8.615850e-47 |
| Msa0264890 | Msa0569900 | 0.817593 | 3.043118e-52 | -8.615850e-47 |
| Msa0266140 | Msa0569900 | -0.803263 | 3.789881e-49 | -8.615850e-47 |
| Msa0267450 | Msa0569900 | -0.818821 | 1.604852e-52 | -8.615850e-47 |
| Msa0267510 | Msa0569900 | -0.823864 | 1.101103e-53 | -8.615850e-47 |
| Msa0269220 | Msa0569900 | -0.816006 | 6.907348e-52 | -8.615850e-47 |
| Msa0270730 | Msa0569900 | -0.806458 | 8.146364e-50 | -8.615850e-47 |
| Msa0275390 | Msa0569900 | 0.803239 | 3.833798e-49 | -8.615850e-47 |
| Msa0294200 | Msa0569900 | 0.831014 | 2.121837e-55 | -8.615850e-47 |
| Msa0297270 | Msa0569900 | -0.849315 | 3.499438e-60 | -8.615850e-47 |
| Msa0303900 | Msa0569900 | 0.803185 | 3.933365e-49 | -8.615850e-47 |
| Msa0331070 | Msa0569900 | -0.808464 | 3.057299e-50 | -8.615850e-47 |
| Msa0334320 | Msa0569900 | 0.805525 | 1.279805e-49 | -8.615850e-47 |
| Msa0340270 | Msa0569900 | 0.811912 | 5.520995e-51 | -8.615850e-47 |
| Msa0362440 | Msa0569900 | -0.802559 | 5.297259e-49 | -8.615850e-47 |
| Msa0364030 | Msa0569900 | -0.843611 | 1.259476e-58 | -8.615850e-47 |
| Msa0523140 | Msa0569900 | -0.802048 | 6.747625e-49 | -8.615850e-47 |
| Msa0523420 | Msa0569900 | -0.816527 | 5.281028e-52 | -8.615850e-47 |
| Msa0525180 | Msa0569900 | -0.820568 | 6.403190e-53 | -8.615850e-47 |
| Msa0526520 | Msa0569900 | -0.827223 | 1.761847e-54 | -8.615850e-47 |
| Msa0533610 | Msa0569900 | -0.808330 | 3.265902e-50 | -8.615850e-47 |
| Msa0537210 | Msa0569900 | 0.805963 | 1.035878e-49 | -8.615850e-47 |
| Msa0559640 | Msa0569900 | -0.803124 | 4.048519e-49 | -8.615850e-47 |
| Msa0565700 | Msa0569900 | 0.803450 | 3.466622e-49 | -8.615850e-47 |
| Msa0569900 | Msa0571900 | -0.812408 | 4.304616e-51 | -8.615850e-47 |
| Msa0569900 | Msa0572730 | -0.810539 | 1.096391e-50 | -8.615850e-47 |
| Msa0569900 | Msa0575960 | -0.815206 | 1.040940e-51 | -8.615850e-47 |
| Msa0569900 | Msa0580410 | -0.814357 | 1.605150e-51 | -8.615850e-47 |
| Msa0569900 | Msa0583270 | -0.800736 | 1.252882e-48 | -8.615850e-47 |
| Msa0569900 | Msa0592400 | -0.801884 | 7.292744e-49 | -8.615850e-47 |
| Msa0569900 | Msa0615070 | 0.807395 | 5.162444e-50 | -8.615850e-47 |
| Msa0569900 | Msa0616890 | -0.820747 | 5.826514e-53 | -8.615850e-47 |
| Msa0569900 | Msa0618680 | 0.807155 | 5.802185e-50 | -8.615850e-47 |
| Msa0569900 | Msa0619670 | 0.892594 | 1.375195e-74 | -8.615850e-47 |
| Msa0569900 | Msa0620340 | 0.806328 | 8.675855e-50 | -8.615850e-47 |
| Msa0569900 | Msa0638300 | -0.813841 | 2.086773e-51 | -8.615850e-47 |
| Msa0569900 | Msa0654400 | -0.804987 | 1.658935e-49 | -8.615850e-47 |
| Msa0569900 | Msa0654500 | -0.813272 | 2.784282e-51 | -8.615850e-47 |
| Msa0569900 | Msa0656570 | -0.801792 | 7.617488e-49 | -8.615850e-47 |
| Msa0569900 | Msa0657340 | 0.805716 | 1.167078e-49 | -8.615850e-47 |
| Msa0569900 | Msa0660050 | 0.825410 | 4.758802e-54 | -8.615850e-47 |
| Msa0569900 | Msa0672090 | 0.818573 | 1.826645e-52 | -8.615850e-47 |
| Msa0569900 | Msa0672950 | 0.809017 | 2.328960e-50 | -8.615850e-47 |
| Msa0569900 | Msa0672980 | 0.817028 | 4.078676e-52 | -8.615850e-47 |
| Msa0569900 | Msa0683200 | -0.807445 | 5.036352e-50 | -8.615850e-47 |
| Msa0569900 | Msa0685390 | -0.864778 | 9.515148e-65 | -8.615850e-47 |
| Msa0569900 | Msa0690100 | -0.801852 | 7.404258e-49 | -8.615850e-47 |
| Msa0569900 | Msa0701430 | 0.804732 | 1.875256e-49 | -8.615850e-47 |
| Msa0569900 | Msa0701800 | -0.830186 | 3.383729e-55 | -8.615850e-47 |
| Msa0569900 | Msa0702690 | -0.824213 | 9.115622e-54 | -8.615850e-47 |
| Msa0569900 | Msa0706080 | 0.880656 | 4.584856e-70 | -8.615850e-47 |
| Msa0569900 | Msa0706110 | 0.837467 | 5.109429e-57 | -8.615850e-47 |
| Msa0569900 | Msa0706700 | -0.808609 | 2.847702e-50 | -8.615850e-47 |
| Msa0569900 | Msa0708840 | -0.813881 | 2.044675e-51 | -8.615850e-47 |
| Msa0569900 | Msa0714230 | -0.842199 | 2.992438e-58 | -8.615850e-47 |
| Msa0569900 | Msa0730250 | -0.806577 | 7.689411e-50 | -8.615850e-47 |
| Msa0569900 | Msa0745140 | 0.833278 | 5.846005e-56 | -8.615850e-47 |
| Msa0569900 | Msa0753270 | 0.808974 | 2.379404e-50 | -8.615850e-47 |
| Msa0569900 | Msa0756670 | -0.803321 | 3.686627e-49 | -8.615850e-47 |
| Msa0569900 | Msa0769910 | -0.805978 | 1.028072e-49 | -8.615850e-47 |
| Msa0569900 | Msa0770540 | -0.823092 | 1.668727e-53 | -8.615850e-47 |
| Msa0569900 | Msa0776640 | 0.830565 | 2.733870e-55 | -8.615850e-47 |
| Msa0569900 | Msa0795910 | -0.812540 | 4.028046e-51 | -8.615850e-47 |
| Msa0569900 | Msa0801320 | -0.800402 | 1.465818e-48 | -8.615850e-47 |
| Msa0569900 | Msa0807100 | -0.802317 | 5.942815e-49 | -8.615850e-47 |
| Msa0569900 | Msa0817690 | 0.810124 | 1.347005e-50 | -8.615850e-47 |
| Msa0569900 | Msa0825920 | 0.831171 | 1.941546e-55 | -8.615850e-47 |
| Msa0569900 | Msa0828350 | 0.811505 | 6.769045e-51 | -8.615850e-47 |
| Msa0569900 | Msa0829250 | -0.811924 | 5.488331e-51 | -8.615850e-47 |
| Msa0569900 | Msa0829770 | -0.820580 | 6.362024e-53 | -8.615850e-47 |
| Msa0569900 | Msa0833360 | -0.803495 | 3.393217e-49 | -8.615850e-47 |
| Msa0569900 | Msa0861400 | -0.803376 | 3.589795e-49 | -8.615850e-47 |
| Msa0569900 | Msa0865420 | 0.820372 | 7.103127e-53 | -8.615850e-47 |
| Msa0569900 | Msa0869320 | -0.807110 | 5.930761e-50 | -8.615850e-47 |
| Msa0569900 | Msa0913520 | 0.808739 | 2.670956e-50 | -8.615850e-47 |
| Msa0569900 | Msa0934290 | -0.817582 | 3.060976e-52 | -8.615850e-47 |
| Msa0569900 | Msa0941150 | -0.824812 | 6.590585e-54 | -8.615850e-47 |
| Msa0569900 | Msa0951200 | 0.800987 | 1.113422e-48 | -8.615850e-47 |
| Msa0569900 | Msa0956600 | -0.824443 | 8.049545e-54 | -8.615850e-47 |
| Msa0569900 | Msa0967900 | -0.806740 | 7.103876e-50 | -8.615850e-47 |
| Msa0569900 | Msa0971780 | -0.827009 | 1.982484e-54 | -8.615850e-47 |
| Msa0569900 | Msa1014550 | -0.827209 | 1.775274e-54 | -8.615850e-47 |
| Msa0569900 | Msa1016450 | -0.813949 | 1.975471e-51 | -8.615850e-47 |
| Msa0569900 | Msa1016580 | -0.820440 | 6.852382e-53 | -8.615850e-47 |
| Msa0569900 | Msa1019040 | -0.800481 | 1.412742e-48 | -8.615850e-47 |
| Msa0569900 | Msa1025440 | -0.801709 | 7.923016e-49 | -8.615850e-47 |
| Msa0569900 | Msa1029030 | -0.808605 | 2.852490e-50 | -8.615850e-47 |
| Msa0569900 | Msa1033430 | 0.802381 | 5.763529e-49 | -8.615850e-47 |
| Msa0569900 | Msa1039150 | -0.817641 | 2.968343e-52 | -8.615850e-47 |
| Msa0569900 | Msa1039440 | -0.810124 | 1.347005e-50 | -8.615850e-47 |
| Msa0569900 | Msa1041060 | 0.800391 | 1.473081e-48 | -8.615850e-47 |
| Msa0569900 | Msa1055520 | -0.830933 | 2.221805e-55 | -8.615850e-47 |
| Msa0569900 | Msa1057940 | -0.852580 | 4.206003e-61 | -8.615850e-47 |
| Msa0569900 | Msa1070630 | -0.805702 | 1.174996e-49 | -8.615850e-47 |
| Msa0569900 | Msa1073050 | 0.807689 | 4.470478e-50 | -8.615850e-47 |
| Msa0569900 | Msa1078590 | -0.862608 | 4.491513e-64 | -8.615850e-47 |
| Msa0569900 | Msa1078760 | -0.862646 | 4.372770e-64 | -8.615850e-47 |
| Msa0569900 | Msa1085570 | -0.816590 | 5.112249e-52 | -8.615850e-47 |
| Msa0569900 | Msa1088400 | -0.809462 | 1.870043e-50 | -8.615850e-47 |
| Msa0569900 | Msa1093190 | -0.848590 | 5.561601e-60 | -8.615850e-47 |
| Msa0569900 | Msa1094810 | 0.838944 | 2.128610e-57 | -8.615850e-47 |
| Msa0569900 | Msa1104020 | -0.834228 | 3.383895e-56 | -8.615850e-47 |
| Msa0569900 | Msa1112210 | -0.834144 | 3.552785e-56 | -8.615850e-47 |
| Msa0569900 | Msa1117770 | -0.802167 | 6.379141e-49 | -8.615850e-47 |
| Msa0569900 | Msa1121720 | -0.842768 | 2.113274e-58 | -8.615850e-47 |
| Msa0569900 | Msa1123440 | -0.805168 | 1.520335e-49 | -8.615850e-47 |
| Msa0569900 | Msa1129120 | -0.823082 | 1.677001e-53 | -8.615850e-47 |
| Msa0569900 | Msa1132880 | -0.814786 | 1.290457e-51 | -8.615850e-47 |
| Msa0569900 | Msa1146980 | 0.820410 | 6.960293e-53 | -8.615850e-47 |
| Msa0569900 | Msa1156120 | -0.807012 | 6.221597e-50 | -8.615850e-47 |
| Msa0569900 | Msa1165460 | 0.820280 | 7.457423e-53 | -8.615850e-47 |
| Msa0569900 | Msa1169590 | -0.868737 | 5.227629e-66 | -8.615850e-47 |
| Msa0569900 | Msa1174280 | 0.816829 | 4.519458e-52 | -8.615850e-47 |
| Msa0569900 | Msa1177650 | 0.807661 | 4.531783e-50 | -8.615850e-47 |
| Msa0569900 | Msa1182530 | -0.800378 | 1.482066e-48 | -8.615850e-47 |
| Msa0569900 | Msa1190350 | -0.814734 | 1.324968e-51 | -8.615850e-47 |
| Msa0569900 | Msa1191530 | -0.822868 | 1.881784e-53 | -8.615850e-47 |
| Msa0569900 | Msa1194480 | -0.829637 | 4.604853e-55 | -8.615850e-47 |
| Msa0569900 | Msa1199540 | -0.838558 | 2.678149e-57 | -8.615850e-47 |
| Msa0569900 | Msa1202710 | -0.829345 | 5.422855e-55 | -8.615850e-47 |
| Msa0569900 | Msa1204870 | -0.808239 | 3.415185e-50 | -8.615850e-47 |
| Msa0569900 | Msa1204900 | -0.826485 | 2.644257e-54 | -8.615850e-47 |
| Msa0569900 | Msa1205270 | -0.858057 | 1.069860e-62 | -8.615850e-47 |
| Msa0569900 | Msa1223710 | 0.807546 | 4.795945e-50 | -8.615850e-47 |
| Msa0569900 | Msa1236120 | -0.803402 | 3.546449e-49 | -8.615850e-47 |
| Msa0569900 | Msa1236190 | -0.820772 | 5.747460e-53 | -8.615850e-47 |
| Msa0569900 | Msa1240490 | 0.802496 | 5.458664e-49 | -8.615850e-47 |
| Msa0569900 | Msa1251240 | 0.808194 | 3.492011e-50 | -8.615850e-47 |
| Msa0569900 | Msa1256490 | -0.814398 | 1.572629e-51 | -8.615850e-47 |
| Msa0569900 | Msa1260520 | -0.805449 | 1.327703e-49 | -8.615850e-47 |
| Msa0569900 | Msa1266120 | -0.825563 | 4.379296e-54 | -8.615850e-47 |
| Msa0569900 | Msa1279200 | -0.834763 | 2.483778e-56 | -8.615850e-47 |
| Msa0569900 | Msa1281780 | 0.821865 | 3.217383e-53 | -8.615850e-47 |
| Msa0569900 | Msa1290090 | -0.826263 | 2.986081e-54 | -8.615850e-47 |
| Msa0569900 | Msa1295210 | -0.814817 | 1.269782e-51 | -8.615850e-47 |
| Msa0569900 | Msa1296810 | -0.821650 | 3.607805e-53 | -8.615850e-47 |
| Msa0569900 | Msa1297220 | -0.824420 | 8.149007e-54 | -8.615850e-47 |
| Msa0569900 | Msa1298980 | -0.819977 | 8.747307e-53 | -8.615850e-47 |
| Msa0569900 | Msa1321010 | 0.824875 | 6.368647e-54 | -8.615850e-47 |
| Msa0569900 | Msa1323260 | -0.813857 | 2.069594e-51 | -8.615850e-47 |
| Msa0569900 | Msa1326780 | -0.831658 | 1.473047e-55 | -8.615850e-47 |
| Msa0569900 | Msa1328680 | -0.839010 | 2.046536e-57 | -8.615850e-47 |
| Msa0569900 | Msa1331570 | -0.800309 | 1.530840e-48 | -8.615850e-47 |
| Msa0569900 | Msa1342360 | -0.836847 | 7.360237e-57 | -8.615850e-47 |
| Msa0569900 | Msa1343450 | -0.806697 | 7.252051e-50 | -8.615850e-47 |
| Msa0569900 | Msa1344930 | 0.811718 | 6.086834e-51 | -8.615850e-47 |
| Msa0569900 | Msa1352600 | -0.817322 | 3.501844e-52 | -8.615850e-47 |
| Msa0569900 | Msa1356100 | -0.842205 | 2.980531e-58 | -8.615850e-47 |
| Msa0569900 | Msa1361980 | 0.805503 | 1.293468e-49 | -8.615850e-47 |
| Msa0569900 | Msa1363310 | -0.828453 | 8.914688e-55 | -8.615850e-47 |
| Msa0569900 | Msa1366140 | -0.819515 | 1.115500e-52 | -8.615850e-47 |
| Msa0569900 | Msa1373310 | -0.812211 | 4.750970e-51 | -8.615850e-47 |
| Msa0569900 | Msa1375640 | 0.802074 | 6.667013e-49 | -8.615850e-47 |
| Msa0569900 | Msa1377980 | -0.807338 | 5.306613e-50 | -8.615850e-47 |
| Msa0569900 | Msa1380790 | 0.806142 | 9.496704e-50 | -8.615850e-47 |
| Msa0569900 | Msa1381300 | -0.803709 | 3.063393e-49 | -8.615850e-47 |
| Msa0569900 | Msa1384410 | -0.820831 | 5.571940e-53 | -8.615850e-47 |
| Msa0569900 | Msa1384970 | -0.800459 | 1.426946e-48 | -8.615850e-47 |
| Msa0569900 | Msa1386580 | -0.828622 | 8.116029e-55 | -8.615850e-47 |
| Msa0569900 | Msa1387100 | -0.814895 | 1.220322e-51 | -8.615850e-47 |
| Msa0569900 | Msa1387450 | -0.822466 | 2.333971e-53 | -8.615850e-47 |
| Msa0569900 | Msa1388720 | -0.822869 | 1.880039e-53 | -8.615850e-47 |
| Msa0569900 | Msa1389670 | -0.802425 | 5.644235e-49 | -8.615850e-47 |
| Msa0569900 | Msa1402300 | 0.803887 | 2.813353e-49 | -8.615850e-47 |
| Msa0569900 | Msa1405830 | 0.800432 | 1.445136e-48 | -8.615850e-47 |
| Msa0569900 | Msa1408280 | -0.806716 | 7.185728e-50 | -8.615850e-47 |
| Msa0569900 | Msa1408860 | -0.802553 | 5.312286e-49 | -8.615850e-47 |
| Msa0569900 | Msa1414780 | -0.826208 | 3.078147e-54 | -8.615850e-47 |
| Msa0569900 | Msa1422160 | -0.815846 | 7.499003e-52 | -8.615850e-47 |
| Msa0569900 | Msa1432730 | -0.803093 | 4.108471e-49 | -8.615850e-47 |
| Msa0569900 | Msa1438410 | -0.808655 | 2.784052e-50 | -8.615850e-47 |
| Msa0569900 | Msa1442200 | 0.803925 | 2.762742e-49 | -8.615850e-47 |
| Msa0569900 | Msa1451200 | -0.807225 | 5.608394e-50 | -8.615850e-47 |
| Msa0569900 | Msa1459130 | -0.824498 | 7.811439e-54 | -8.615850e-47 |
| Msa0569900 | Msa1461840 | -0.801897 | 7.249572e-49 | -8.615850e-47 |
| Msa0569900 | Msa1464470 | -0.826919 | 2.082259e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0569900 | MtrunA17_Chr8g0385221 | 90.929 | 463 | 4 | 4 | 1 | 463 | 1 | 425 | 0.0 | 810 |
| Msa0569900 | MtrunA17_Chr7g0262421 | 28.960 | 404 | 233 | 10 | 59 | 453 | 13 | 371 | 5.03e-41 | 150 |
| Msa0569900 | MtrunA17_Chr1g0183131 | 28.429 | 401 | 237 | 10 | 59 | 452 | 11 | 368 | 7.82e-41 | 150 |
| Msa0569900 | MtrunA17_Chr3g0125961 | 28.986 | 414 | 237 | 15 | 59 | 462 | 12 | 378 | 7.87e-40 | 147 |
| Msa0569900 | MtrunA17_Chr3g0125911 | 28.502 | 414 | 239 | 15 | 59 | 462 | 12 | 378 | 7.49e-39 | 144 |
| Msa0569900 | MtrunA17_Chr3g0125941 | 28.398 | 412 | 238 | 15 | 61 | 462 | 15 | 379 | 1.18e-37 | 141 |
| Msa0569900 | MtrunA17_Chr5g0440521 | 28.851 | 409 | 242 | 12 | 59 | 460 | 21 | 387 | 4.26e-34 | 132 |
| Msa0569900 | MtrunA17_Chr4g0021211 | 27.494 | 411 | 243 | 10 | 59 | 462 | 36 | 398 | 3.17e-32 | 127 |
| Msa0569900 | MtrunA17_Chr6g0478081 | 27.139 | 409 | 247 | 11 | 59 | 462 | 13 | 375 | 6.19e-30 | 120 |
| Msa0569900 | MtrunA17_Chr3g0132351 | 26.492 | 419 | 259 | 10 | 52 | 462 | 12 | 389 | 8.17e-30 | 120 |
| Msa0569900 | MtrunA17_Chr5g0419681 | 26.161 | 409 | 252 | 10 | 59 | 462 | 11 | 374 | 2.79e-28 | 115 |
| Msa0569900 | MtrunA17_Chr3g0118441 | 25.610 | 410 | 257 | 11 | 51 | 453 | 8 | 376 | 1.33e-27 | 113 |
| Msa0569900 | MtrunA17_Chr7g0242291 | 29.167 | 408 | 231 | 16 | 59 | 453 | 23 | 385 | 4.10e-27 | 112 |
| Msa0569900 | MtrunA17_Chr6g0474141 | 24.485 | 388 | 216 | 12 | 70 | 447 | 27 | 347 | 1.51e-21 | 95.9 |
| Msa0569900 | MtrunA17_Chr3g0118431 | 31.330 | 233 | 150 | 8 | 229 | 454 | 62 | 291 | 2.54e-21 | 94.0 |
| Msa0569900 | MtrunA17_Chr7g0242301 | 26.289 | 388 | 209 | 10 | 72 | 453 | 1 | 317 | 1.63e-20 | 92.0 |
| Msa0569900 | MtrunA17_Chr4g0064291 | 25.068 | 367 | 200 | 10 | 63 | 415 | 7 | 312 | 1.69e-15 | 77.8 |
| Msa0569900 | MtrunA17_Chr5g0411801 | 24.522 | 314 | 173 | 7 | 72 | 381 | 57 | 310 | 1.81e-15 | 78.2 |
| Msa0569900 | MtrunA17_Chr8g0367151 | 25.159 | 314 | 171 | 8 | 72 | 381 | 25 | 278 | 6.63e-15 | 75.9 |
| Msa0569900 | MtrunA17_Chr1g0208031 | 24.198 | 405 | 239 | 11 | 60 | 462 | 13 | 351 | 7.09e-15 | 75.9 |
| Msa0569900 | MtrunA17_Chr5g0411881 | 25.602 | 332 | 179 | 10 | 55 | 381 | 11 | 279 | 4.82e-14 | 73.6 |
| Msa0569900 | MtrunA17_Chr5g0411841 | 24.096 | 332 | 179 | 8 | 63 | 381 | 7 | 278 | 5.26e-13 | 70.1 |
| Msa0569900 | MtrunA17_Chr5g0411941 | 23.560 | 382 | 222 | 10 | 84 | 462 | 39 | 353 | 6.07e-13 | 70.1 |
| Msa0569900 | MtrunA17_Chr5g0411791 | 24.000 | 300 | 166 | 6 | 84 | 381 | 13 | 252 | 7.33e-13 | 69.7 |
| Msa0569900 | MtrunA17_Chr8g0383721 | 25.547 | 274 | 138 | 8 | 71 | 338 | 24 | 237 | 1.72e-12 | 68.6 |
| Msa0569900 | MtrunA17_Chr2g0281281 | 28.796 | 191 | 131 | 5 | 234 | 423 | 92 | 278 | 2.33e-12 | 67.8 |
| Msa0569900 | MtrunA17_Chr4g0013331 | 29.060 | 234 | 157 | 5 | 233 | 460 | 142 | 372 | 3.26e-12 | 67.8 |
| Msa0569900 | MtrunA17_Chr5g0411811 | 25.740 | 338 | 176 | 11 | 59 | 382 | 3 | 279 | 1.70e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0569900 | AT5G63620.1 | 75.921 | 407 | 64 | 2 | 57 | 463 | 55 | 427 | 0.0 | 640 |
| Msa0569900 | AT5G63620.2 | 75.430 | 407 | 66 | 2 | 57 | 463 | 55 | 427 | 0.0 | 636 |
| Msa0569900 | AT5G63620.3 | 74.126 | 286 | 40 | 2 | 57 | 342 | 55 | 306 | 5.81e-154 | 440 |
| Msa0569900 | AT5G43940.1 | 28.000 | 400 | 240 | 9 | 59 | 452 | 11 | 368 | 2.60e-40 | 149 |
| Msa0569900 | AT5G43940.2 | 28.571 | 399 | 235 | 10 | 61 | 452 | 25 | 380 | 6.91e-40 | 148 |
| Msa0569900 | AT1G77120.1 | 28.329 | 413 | 241 | 13 | 59 | 462 | 11 | 377 | 1.55e-38 | 144 |
| Msa0569900 | AT1G64710.1 | 26.434 | 401 | 250 | 7 | 59 | 453 | 11 | 372 | 1.12e-37 | 142 |
| Msa0569900 | AT4G22110.2 | 30.310 | 419 | 239 | 11 | 45 | 453 | 4 | 379 | 1.71e-37 | 141 |
| Msa0569900 | AT4G22110.1 | 30.310 | 419 | 239 | 11 | 45 | 453 | 4 | 379 | 1.71e-37 | 141 |
| Msa0569900 | AT1G64710.2 | 26.289 | 388 | 241 | 7 | 72 | 453 | 1 | 349 | 7.29e-36 | 136 |
| Msa0569900 | AT5G42250.1 | 27.206 | 408 | 250 | 9 | 55 | 455 | 16 | 383 | 3.31e-35 | 135 |
| Msa0569900 | AT1G22430.2 | 28.954 | 411 | 239 | 12 | 53 | 453 | 11 | 378 | 4.57e-34 | 132 |
| Msa0569900 | AT1G22430.1 | 28.954 | 411 | 239 | 12 | 53 | 453 | 11 | 378 | 4.57e-34 | 132 |
| Msa0569900 | AT1G32780.1 | 27.778 | 414 | 252 | 13 | 59 | 462 | 12 | 388 | 4.34e-33 | 129 |
| Msa0569900 | AT5G24760.1 | 27.628 | 409 | 241 | 12 | 61 | 462 | 19 | 379 | 1.65e-32 | 127 |
| Msa0569900 | AT1G22440.1 | 28.117 | 409 | 243 | 13 | 53 | 452 | 9 | 375 | 5.57e-31 | 123 |
| Msa0569900 | AT5G24760.2 | 27.387 | 398 | 234 | 12 | 72 | 462 | 1 | 350 | 1.53e-30 | 121 |
| Msa0569900 | AT5G24760.3 | 27.387 | 398 | 234 | 12 | 72 | 462 | 1 | 350 | 1.53e-30 | 121 |
| Msa0569900 | AT1G64710.3 | 25.926 | 324 | 202 | 5 | 134 | 453 | 14 | 303 | 3.60e-29 | 117 |
| Msa0569900 | AT4G22110.3 | 30.241 | 291 | 162 | 5 | 45 | 333 | 4 | 255 | 7.67e-25 | 103 |
| Msa0569900 | AT1G22430.3 | 28.846 | 312 | 177 | 8 | 53 | 359 | 11 | 282 | 2.65e-24 | 103 |
| Msa0569900 | AT5G24760.4 | 31.276 | 243 | 158 | 6 | 226 | 462 | 26 | 265 | 4.95e-23 | 98.6 |
| Msa0569900 | AT1G22430.4 | 28.369 | 282 | 161 | 6 | 53 | 332 | 11 | 253 | 1.20e-22 | 98.2 |
| Msa0569900 | AT1G22430.5 | 28.369 | 282 | 161 | 6 | 53 | 332 | 11 | 253 | 1.20e-22 | 98.2 |
| Msa0569900 | AT5G51970.1 | 22.637 | 402 | 234 | 10 | 70 | 463 | 29 | 361 | 1.39e-20 | 93.6 |
| Msa0569900 | AT5G51970.2 | 22.637 | 402 | 234 | 10 | 70 | 463 | 29 | 361 | 1.39e-20 | 93.6 |
| Msa0569900 | AT4G37990.1 | 24.277 | 346 | 196 | 10 | 72 | 413 | 21 | 304 | 6.76e-14 | 73.2 |
| Msa0569900 | AT4G37970.1 | 23.485 | 396 | 231 | 10 | 72 | 462 | 26 | 354 | 1.94e-13 | 72.0 |
| Msa0569900 | AT4G37970.4 | 24.214 | 318 | 175 | 8 | 72 | 384 | 26 | 282 | 3.05e-13 | 70.9 |
| Msa0569900 | AT4G21580.2 | 28.652 | 178 | 123 | 4 | 230 | 406 | 55 | 229 | 1.38e-12 | 68.6 |
| Msa0569900 | AT4G37970.2 | 25.912 | 274 | 142 | 7 | 72 | 340 | 26 | 243 | 1.82e-12 | 67.8 |
| Msa0569900 | AT4G37970.3 | 25.912 | 274 | 142 | 7 | 72 | 340 | 26 | 243 | 1.87e-12 | 67.8 |
| Msa0569900 | AT4G21580.1 | 27.000 | 200 | 141 | 5 | 230 | 427 | 88 | 284 | 2.19e-12 | 68.6 |
| Msa0569900 | AT5G61510.2 | 31.176 | 170 | 113 | 4 | 233 | 401 | 117 | 283 | 2.27e-12 | 68.6 |
| Msa0569900 | AT2G21730.1 | 24.765 | 319 | 174 | 10 | 72 | 384 | 19 | 277 | 3.44e-12 | 68.2 |
| Msa0569900 | AT5G61510.1 | 31.176 | 170 | 113 | 4 | 233 | 401 | 174 | 340 | 4.23e-12 | 68.2 |
| Msa0569900 | AT2G21890.1 | 25.078 | 319 | 172 | 11 | 72 | 384 | 19 | 276 | 3.48e-11 | 65.1 |
Find 122 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTAACCTTTCTATGGTTT+TGG | 0.175052 | 4_1:+71916547 | None:intergenic |
| ATAAATTAAGCTTGTCTATA+TGG | 0.216639 | 4_1:+71916046 | None:intergenic |
| GGTGATACTGTTGCTGTTAT+TGG | 0.219498 | 4_1:-71915720 | Msa0569900:CDS |
| CTGGCACAAGCTGGTTCTTT+AGG | 0.246946 | 4_1:-71915045 | Msa0569900:CDS |
| ACCGATATACATGTATAGTA+TGG | 0.286726 | 4_1:-71915886 | Msa0569900:CDS |
| TGTGAACAGATAAAAGTTAT+TGG | 0.299278 | 4_1:-71914468 | Msa0569900:intron |
| TCGAGTTTCACCATCGTATA+AGG | 0.300970 | 4_1:+71916161 | None:intergenic |
| ACTGTTGCTGTTATTGGAAC+TGG | 0.304388 | 4_1:-71915714 | Msa0569900:CDS |
| GATGAGAAGTTCACCAGCTT+TGG | 0.318763 | 4_1:+71916891 | None:intergenic |
| TATACCGAGTCTGCAATTCT+AGG | 0.324055 | 4_1:-71915798 | Msa0569900:CDS |
| TCGGTATATGGCATTGAGTT+TGG | 0.337585 | 4_1:+71915813 | None:intergenic |
| CCAATTGGATCTCGAGTTGT+TGG | 0.344296 | 4_1:-71916361 | Msa0569900:CDS |
| TTCAATGGTGAGAGGTTTGT+TGG | 0.348495 | 4_1:+71916933 | None:intergenic |
| AACTTCACGCAGGAAATTAC+TGG | 0.359885 | 4_1:-71915171 | Msa0569900:intron |
| TTAATTAGATTGGCAGAAAC+AGG | 0.368222 | 4_1:-71914408 | Msa0569900:CDS |
| ATAAAAGTTATTGGCTCATA+TGG | 0.373792 | 4_1:-71914459 | Msa0569900:CDS |
| ATGAGAAGTTCACCAGCTTT+GGG | 0.377738 | 4_1:+71916892 | None:intergenic |
| TATAATTGCTGTTGATGTTC+AGG | 0.379502 | 4_1:-71915422 | Msa0569900:CDS |
| GGAGTCAGGCAAAGCATTCC+AGG | 0.386069 | 4_1:-71914340 | Msa0569900:CDS |
| TCTTCCAAAGTTAATTAGAT+TGG | 0.387780 | 4_1:-71914418 | Msa0569900:CDS |
| CTGCAGATAGCTAGAGCATT+TGG | 0.389366 | 4_1:-71915454 | Msa0569900:CDS |
| AGAATTGCAGACTCGGTATA+TGG | 0.391325 | 4_1:+71915801 | None:intergenic |
| ACTTGAAAAGGTTGTCTTGT+TGG | 0.403580 | 4_1:-71917086 | Msa0569900:CDS |
| GTTGTGGGCCATGAGATTAC+TGG | 0.411881 | 4_1:-71916602 | Msa0569900:CDS |
| GACGTTGCTGTTGAAGCCTT+AGG | 0.413872 | 4_1:-71915135 | Msa0569900:CDS |
| GATTGTTTCAGGCTTCCAAT+TGG | 0.413947 | 4_1:-71916376 | Msa0569900:intron |
| CTGTTGCTGTTATTGGAACT+GGG | 0.417859 | 4_1:-71915713 | Msa0569900:CDS |
| CCCATACTATACATGTATAT+CGG | 0.418017 | 4_1:+71915885 | None:intergenic |
| TAAATTAAGCTTGTCTATAT+GGG | 0.421177 | 4_1:+71916047 | None:intergenic |
| ATAGTATAGCTCTACATTCC+AGG | 0.421704 | 4_1:-71914276 | Msa0569900:exon |
| TGAATCAAGTAAGAAGTAAG+AGG | 0.421869 | 4_1:+71916113 | None:intergenic |
| TTGTTTCATTTCAGTTTCAT+TGG | 0.430102 | 4_1:-71917187 | Msa0569900:five_prime_UTR |
| TCTGCCAATCTAATTAACTT+TGG | 0.433236 | 4_1:+71914414 | None:intergenic |
| GCTCATATGGAGGGAGGGCT+AGG | 0.438318 | 4_1:-71914446 | Msa0569900:CDS |
| CGCTGCACAAAAGCATTGCC+TGG | 0.444811 | 4_1:+71914258 | None:intergenic |
| ACCAACAGCTTCTGTGTGAA+TGG | 0.445411 | 4_1:+71917005 | None:intergenic |
| TGATAAAATAACTGATTGTA+AGG | 0.447564 | 4_1:-71914141 | Msa0569900:three_prime_UTR |
| GGAGGAAAAGCAGTGATGAT+TGG | 0.449002 | 4_1:-71915069 | Msa0569900:CDS |
| CACATTCCTCGTCCCAAAGC+TGG | 0.450459 | 4_1:-71916904 | Msa0569900:CDS |
| TGCAACTCACACAATAAATT+CGG | 0.452277 | 4_1:-71915368 | Msa0569900:CDS |
| TTTGCTTATAACCGCGCAAA+AGG | 0.453633 | 4_1:-71916186 | Msa0569900:CDS |
| CGACTGTTTCTTCGAGGAAG+TGG | 0.460944 | 4_1:-71916141 | Msa0569900:CDS |
| GAAACAGGTATCTTCGACCT+TGG | 0.461531 | 4_1:-71914393 | Msa0569900:CDS |
| TCAATGGTGAGAGGTTTGTT+GGG | 0.468644 | 4_1:+71916934 | None:intergenic |
| ACGTTGCTGTTGAAGCCTTA+GGG | 0.470520 | 4_1:-71915134 | Msa0569900:CDS |
| AGCTAGAGCATTTGGTGCCT+CGG | 0.473664 | 4_1:-71915446 | Msa0569900:CDS |
| GAAGCTGTTGGTGTTGGTGT+TGG | 0.474101 | 4_1:-71916994 | Msa0569900:CDS |
| CCAACAACTCGAGATCCAAT+TGG | 0.477791 | 4_1:+71916361 | None:intergenic |
| TTTCAGTTTCATTGGAAGAT+CGG | 0.481224 | 4_1:-71917179 | Msa0569900:five_prime_UTR |
| AATACCGCCAATGCATTTGC+TGG | 0.484950 | 4_1:+71915837 | None:intergenic |
| TCAGAAGCAACAACTTGAAA+AGG | 0.487471 | 4_1:-71917098 | Msa0569900:CDS |
| AGTTCACCAGCTTTGGGACG+AGG | 0.494387 | 4_1:+71916898 | None:intergenic |
| CATGCAGCCGAAGTGCGCCC+TGG | 0.499244 | 4_1:-71915741 | Msa0569900:CDS |
| AGCTGGTTCTTTAGGAGAGG+TGG | 0.503154 | 4_1:-71915037 | Msa0569900:CDS |
| AGACACCTATATGTGTTCTC+AGG | 0.510626 | 4_1:+71914191 | None:intergenic |
| CAATGTTACCTTTGAACAGT+AGG | 0.517503 | 4_1:+71916309 | None:intergenic |
| TACAATCATATCACAAGTAT+CGG | 0.518398 | 4_1:+71916083 | None:intergenic |
| GTCTAAGTGAGATTGAGAAA+TGG | 0.520409 | 4_1:-71917148 | Msa0569900:exon |
| TTCTTGTAACAGCATGGCCA+AGG | 0.522537 | 4_1:+71914376 | None:intergenic |
| AAATAGACTTGTTCGCAGAA+AGG | 0.523418 | 4_1:-71915010 | Msa0569900:intron |
| GAAACTCGACTGTTTCTTCG+AGG | 0.525121 | 4_1:-71916147 | Msa0569900:CDS |
| CAGGAAATTACTGGTGGAAA+GGG | 0.526933 | 4_1:-71915162 | Msa0569900:CDS |
| AGGAATGTGAAATTCTTCAA+TGG | 0.532592 | 4_1:+71916918 | None:intergenic |
| ACAACACAAGGACTTGAAAA+CGG | 0.537012 | 4_1:+71916620 | None:intergenic |
| CGGCCATATGTCTCACACAT+TGG | 0.547239 | 4_1:-71914234 | Msa0569900:three_prime_UTR |
| GCAGGAAATTACTGGTGGAA+AGG | 0.554988 | 4_1:-71915163 | Msa0569900:intron |
| CCGATATACATGTATAGTAT+GGG | 0.556704 | 4_1:-71915885 | Msa0569900:CDS |
| AGTGGTGAAAGACTCGTCAT+TGG | 0.558258 | 4_1:-71914063 | Msa0569900:three_prime_UTR |
| GCAAAAGGAACCTTATACGA+TGG | 0.560670 | 4_1:-71916171 | Msa0569900:CDS |
| CTGATTCCAAAACCATAGAA+AGG | 0.561548 | 4_1:-71916553 | Msa0569900:intron |
| CTAGAGAAAGCAAAGACACT+TGG | 0.562324 | 4_1:-71915391 | Msa0569900:CDS |
| ATCTCATGGCCCACAACACA+AGG | 0.562994 | 4_1:+71916608 | None:intergenic |
| TCTGATCTTCATGTCATGAA+AGG | 0.564745 | 4_1:-71916650 | Msa0569900:CDS |
| AAATGTCTGTGGTCTCCCTA+AGG | 0.567546 | 4_1:+71915119 | None:intergenic |
| TGCACACAAAGTGTGAAAGA+TGG | 0.567900 | 4_1:-71915090 | Msa0569900:CDS |
| ACTCCAATGTGTGAGACATA+TGG | 0.568581 | 4_1:+71914231 | None:intergenic |
| ACAGCACCACGCATGTAAGA+TGG | 0.569118 | 4_1:+71916967 | None:intergenic |
| TCCATTCACACAGAAGCTGT+TGG | 0.570592 | 4_1:-71917006 | Msa0569900:CDS |
| AAAGTTATTGGCTCATATGG+AGG | 0.577253 | 4_1:-71914456 | Msa0569900:CDS |
| TGAAATTCTTCAATGGTGAG+AGG | 0.578851 | 4_1:+71916925 | None:intergenic |
| TTTGCATCTTGCTCATGTAG+TGG | 0.582769 | 4_1:-71914081 | Msa0569900:three_prime_UTR |
| TGTTGAAGCTGATGCATGTA+CGG | 0.583923 | 4_1:-71917031 | Msa0569900:CDS |
| CACACAGAAGCTGTTGGTGT+TGG | 0.584794 | 4_1:-71917000 | Msa0569900:CDS |
| TCACACAATAAATTCGGCTA+AGG | 0.585756 | 4_1:-71915362 | Msa0569900:CDS |
| CTCACACATTGGAGTTGCAA+AGG | 0.592098 | 4_1:-71914223 | Msa0569900:three_prime_UTR |
| AGTATCACCAGGGCGCACTT+CGG | 0.593810 | 4_1:+71915734 | None:intergenic |
| CAACTTCACCAGTAATCTCA+TGG | 0.594487 | 4_1:+71916594 | None:intergenic |
| ACAAGCTGGTTCTTTAGGAG+AGG | 0.597825 | 4_1:-71915040 | Msa0569900:CDS |
| GGAGCCTTCATTATGCCTTG+TGG | 0.598290 | 4_1:-71916340 | Msa0569900:CDS |
| TGTTGCTGTTATTGGAACTG+GGG | 0.602671 | 4_1:-71915712 | Msa0569900:CDS |
| GTTGCCACAAGGCATAATGA+AGG | 0.602890 | 4_1:+71916336 | None:intergenic |
| CAACTGTTCCTACTGTTCAA+AGG | 0.605122 | 4_1:-71916317 | Msa0569900:intron |
| TGAAATGAAACAAAACAAAG+TGG | 0.605297 | 4_1:+71917197 | Msa0569910:intron |
| ACATCCTAGAATTGCAGACT+CGG | 0.607209 | 4_1:+71915794 | None:intergenic |
| AAGTTATTGGCTCATATGGA+GGG | 0.607746 | 4_1:-71914455 | Msa0569900:CDS |
| TGGCATCTGCACTAGTTCGT+AGG | 0.610288 | 4_1:-71917128 | Msa0569900:CDS |
| TGTGCCAGCAAATGCATTGG+CGG | 0.610816 | 4_1:-71915841 | Msa0569900:CDS |
| CATTGGAGTTGCAAAGGTGT+TGG | 0.610873 | 4_1:-71914217 | Msa0569900:three_prime_UTR |
| ATGATTGGACTGGCACAAGC+TGG | 0.611907 | 4_1:-71915054 | Msa0569900:CDS |
| GTTGCTGTTATTGGAACTGG+GGG | 0.615280 | 4_1:-71915711 | Msa0569900:CDS |
| ATATACATGTATAGTATGGG+AGG | 0.616452 | 4_1:-71915882 | Msa0569900:CDS |
| ATAACAGCAACAGTATCACC+AGG | 0.620053 | 4_1:+71915723 | None:intergenic |
| AAGCTTCGCACAGATCATCA+TGG | 0.622065 | 4_1:+71916211 | None:intergenic |
| AAAAGCAGTGATGATTGGAC+TGG | 0.624735 | 4_1:-71915064 | Msa0569900:CDS |
| GTGCACTGAGCAAATGTCTG+TGG | 0.625723 | 4_1:+71915108 | None:intergenic |
| GAATCAAGTAAGAAGTAAGA+GGG | 0.626857 | 4_1:+71916114 | None:intergenic |
| ACTGGTGAAGTTGTTGAACA+TGG | 0.627651 | 4_1:-71916584 | Msa0569900:CDS |
| GAACTTCTCATCAAAACCAA+GGG | 0.629940 | 4_1:-71916880 | Msa0569900:intron |
| CAGTAGGAACAGTTGCCACA+AGG | 0.639136 | 4_1:+71916325 | None:intergenic |
| TTCACGCAGGAAATTACTGG+TGG | 0.641213 | 4_1:-71915168 | Msa0569900:intron |
| TATACATGTATAGTATGGGA+GGG | 0.642941 | 4_1:-71915881 | Msa0569900:CDS |
| TGAACTTCTCATCAAAACCA+AGG | 0.647879 | 4_1:-71916881 | Msa0569900:CDS |
| TATTGGCTCATATGGAGGGA+GGG | 0.648186 | 4_1:-71914451 | Msa0569900:CDS |
| TTATTGGCTCATATGGAGGG+AGG | 0.648294 | 4_1:-71914452 | Msa0569900:CDS |
| ATCAACAGCAATTATATCCG+AGG | 0.648309 | 4_1:+71915429 | None:intergenic |
| TGTTGTGCCAGCAAATGCAT+TGG | 0.658264 | 4_1:-71915844 | Msa0569900:CDS |
| GGATTACCATCTTACATGCG+TGG | 0.660278 | 4_1:-71916973 | Msa0569900:CDS |
| GGTGTCCTGAGAACACATAT+AGG | 0.669550 | 4_1:-71914196 | Msa0569900:three_prime_UTR |
| GCATTCCAGGATCTCAACGA+AGG | 0.671434 | 4_1:-71914327 | Msa0569900:CDS |
| ACACAAAGTGTGAAAGATGG+AGG | 0.689218 | 4_1:-71915087 | Msa0569900:CDS |
| TCATGACATGAAGATCAGAG+TGG | 0.751085 | 4_1:+71916654 | None:intergenic |
| TAACAGCAACAGTATCACCA+GGG | 0.751466 | 4_1:+71915724 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTGATATTGTTATTAT+TGG | - | chr4_1:71914465-71914484 | Msa0569900:intron | 10.0% |
| !! | TTTCAGTATTCTAATTATAA+AGG | + | chr4_1:71915261-71915280 | None:intergenic | 15.0% |
| !! | ATTAGAATACTGAAAATAAT+TGG | - | chr4_1:71915266-71915285 | Msa0569900:intron | 15.0% |
| !! | AAAATAATTGGCAAATTTAT+AGG | - | chr4_1:71915278-71915297 | Msa0569900:intron | 15.0% |
| !! | TAGAGAAAACAATTAAATAA+AGG | + | chr4_1:71916000-71916019 | None:intergenic | 15.0% |
| !! | AAAAAACTTTAACCTTTCTA+TGG | + | chr4_1:71914652-71914671 | None:intergenic | 20.0% |
| !! | TAAATTAAGCTTGTCTATAT+GGG | + | chr4_1:71915146-71915165 | None:intergenic | 20.0% |
| !! | ATAAATTAAGCTTGTCTATA+TGG | + | chr4_1:71915147-71915166 | None:intergenic | 20.0% |
| !!! | TATACAAGTATCTTTTCAAT+GGG | + | chr4_1:71915859-71915878 | None:intergenic | 20.0% |
| !!! | ATATACAAGTATCTTTTCAA+TGG | + | chr4_1:71915860-71915879 | None:intergenic | 20.0% |
| !! | GATTAAATTGTTCATATCAA+GGG | - | chr4_1:71916494-71916513 | Msa0569900:intron | 20.0% |
| !!! | ACATACAAATTTAATTTGCT+TGG | + | chr4_1:71916705-71916724 | None:intergenic | 20.0% |
| !!! | TTACAATCAGTTATTTTATC+AGG | + | chr4_1:71917050-71917069 | None:intergenic | 20.0% |
| !! | TGATAAAATAACTGATTGTA+AGG | - | chr4_1:71917049-71917068 | Msa0569900:CDS | 20.0% |
| ! | TGAAATGAAACAAAACAAAG+TGG | + | chr4_1:71913996-71914015 | None:intergenic | 25.0% |
| ! | TTGTTTCATTTCAGTTTCAT+TGG | - | chr4_1:71914003-71914022 | Msa0569900:three_prime_UTR | 25.0% |
| ! | TACAATCATATCACAAGTAT+CGG | + | chr4_1:71915110-71915129 | None:intergenic | 25.0% |
| ! | TAACTAAATCAATTGTCAAG+TGG | - | chr4_1:71915515-71915534 | Msa0569900:intron | 25.0% |
| ! | GAAACAGCAAAAATAGAAAA+AGG | + | chr4_1:71915580-71915599 | None:intergenic | 25.0% |
| !! | TAAGAATTAGGTTGTACAAA+TGG | - | chr4_1:71916422-71916441 | Msa0569900:intron | 25.0% |
| ! | AAATGATTCAAGATAACCTT+TGG | - | chr4_1:71916471-71916490 | Msa0569900:intron | 25.0% |
| ! | AATGATTCAAGATAACCTTT+GGG | - | chr4_1:71916472-71916491 | Msa0569900:intron | 25.0% |
| ! | TATGAACAATTTAATCCCAA+AGG | + | chr4_1:71916490-71916509 | None:intergenic | 25.0% |
| ! | GGATTAAATTGTTCATATCA+AGG | - | chr4_1:71916493-71916512 | Msa0569900:intron | 25.0% |
| ! | ATGAATTTGTCAAATAAGTG+AGG | + | chr4_1:71916682-71916701 | None:intergenic | 25.0% |
| ! | TGTGAACAGATAAAAGTTAT+TGG | - | chr4_1:71916722-71916741 | Msa0569900:intron | 25.0% |
| !!! | ATAAAAGTTATTGGCTCATA+TGG | - | chr4_1:71916731-71916750 | Msa0569900:intron | 25.0% |
| ! | TCTTCCAAAGTTAATTAGAT+TGG | - | chr4_1:71916772-71916791 | Msa0569900:intron | 25.0% |
| !! | TACAAGAAAATACACTTTTG+AGG | - | chr4_1:71916829-71916848 | Msa0569900:intron | 25.0% |
| TTTCAGTTTCATTGGAAGAT+CGG | - | chr4_1:71914011-71914030 | Msa0569900:three_prime_UTR | 30.0% | |
| AGGAATGTGAAATTCTTCAA+TGG | + | chr4_1:71914275-71914294 | None:intergenic | 30.0% | |
| ! | AGCTGCAATATAGAAGTTTT+AGG | + | chr4_1:71914412-71914431 | None:intergenic | 30.0% |
| TCTATATTGCAGCTTAATTG+TGG | - | chr4_1:71914418-71914437 | Msa0569900:CDS | 30.0% | |
| ! | AAGATGTGATTTTTGAATGC+AGG | - | chr4_1:71914501-71914520 | Msa0569900:intron | 30.0% |
| ! | CTTTAACCTTTCTATGGTTT+TGG | + | chr4_1:71914646-71914665 | None:intergenic | 30.0% |
| AGCATTATCACACAAAAATG+TGG | + | chr4_1:71914713-71914732 | None:intergenic | 30.0% | |
| AGCAAAAAGGAATAACAAGT+AGG | - | chr4_1:71914782-71914801 | Msa0569900:intron | 30.0% | |
| TCCATTTGTCAACTGAATTA+TGG | - | chr4_1:71914919-71914938 | Msa0569900:intron | 30.0% | |
| ACCATAATTCAGTTGACAAA+TGG | + | chr4_1:71914923-71914942 | None:intergenic | 30.0% | |
| GAATCAAGTAAGAAGTAAGA+GGG | + | chr4_1:71915079-71915098 | None:intergenic | 30.0% | |
| TGAATCAAGTAAGAAGTAAG+AGG | + | chr4_1:71915080-71915099 | None:intergenic | 30.0% | |
| GACTATGTAAACACATACTT+AGG | + | chr4_1:71915171-71915190 | None:intergenic | 30.0% | |
| ACCGATATACATGTATAGTA+TGG | - | chr4_1:71915304-71915323 | Msa0569900:intron | 30.0% | |
| CCCATACTATACATGTATAT+CGG | + | chr4_1:71915308-71915327 | None:intergenic | 30.0% | |
| CCGATATACATGTATAGTAT+GGG | - | chr4_1:71915305-71915324 | Msa0569900:intron | 30.0% | |
| ATATACATGTATAGTATGGG+AGG | - | chr4_1:71915308-71915327 | Msa0569900:intron | 30.0% | |
| TATACATGTATAGTATGGGA+GGG | - | chr4_1:71915309-71915328 | Msa0569900:intron | 30.0% | |
| TTCGATAATGCTTGCTTAAA+TGG | - | chr4_1:71915597-71915616 | Msa0569900:intron | 30.0% | |
| AAGCGGTGATAAAGTTAAAA+TGG | + | chr4_1:71915708-71915727 | None:intergenic | 30.0% | |
| ! | TATAATTGCTGTTGATGTTC+AGG | - | chr4_1:71915768-71915787 | Msa0569900:CDS | 30.0% |
| TGCAACTCACACAATAAATT+CGG | - | chr4_1:71915822-71915841 | Msa0569900:CDS | 30.0% | |
| !!! | ACCACTAGTTTTATTCATGT+TGG | - | chr4_1:71916270-71916289 | Msa0569900:intron | 30.0% |
| TCCAACATGAATAAAACTAG+TGG | + | chr4_1:71916274-71916293 | None:intergenic | 30.0% | |
| AGCACACTTATCGTTATTAA+TGG | - | chr4_1:71916306-71916325 | Msa0569900:intron | 30.0% | |
| TTGTTCAACAGTTCAAGTAA+AGG | + | chr4_1:71916453-71916472 | None:intergenic | 30.0% | |
| CACTCAATTGAGTTTAAAAG+CGG | + | chr4_1:71916520-71916539 | None:intergenic | 30.0% | |
| TCTGCCAATCTAATTAACTT+TGG | + | chr4_1:71916779-71916798 | None:intergenic | 30.0% | |
| TTAATTAGATTGGCAGAAAC+AGG | - | chr4_1:71916782-71916801 | Msa0569900:intron | 30.0% | |
| ! | TGTATTTTCTTGTAACAGCA+TGG | + | chr4_1:71916823-71916842 | None:intergenic | 30.0% |
| GTCTAAGTGAGATTGAGAAA+TGG | - | chr4_1:71914042-71914061 | Msa0569900:three_prime_UTR | 35.0% | |
| TCAGAAGCAACAACTTGAAA+AGG | - | chr4_1:71914092-71914111 | Msa0569900:three_prime_UTR | 35.0% | |
| ACTTGAAAAGGTTGTCTTGT+TGG | - | chr4_1:71914104-71914123 | Msa0569900:three_prime_UTR | 35.0% | |
| TGAAATTCTTCAATGGTGAG+AGG | + | chr4_1:71914268-71914287 | None:intergenic | 35.0% | |
| TGAACTTCTCATCAAAACCA+AGG | - | chr4_1:71914309-71914328 | Msa0569900:CDS | 35.0% | |
| GAACTTCTCATCAAAACCAA+GGG | - | chr4_1:71914310-71914329 | Msa0569900:CDS | 35.0% | |
| AGAGAGATAAACAATACCCT+TGG | + | chr4_1:71914329-71914348 | None:intergenic | 35.0% | |
| ! | TGATTTTTGAATGCAGGATG+TGG | - | chr4_1:71914507-71914526 | Msa0569900:intron | 35.0% |
| TCTGATCTTCATGTCATGAA+AGG | - | chr4_1:71914540-71914559 | Msa0569900:intron | 35.0% | |
| ACAACACAAGGACTTGAAAA+CGG | + | chr4_1:71914573-71914592 | None:intergenic | 35.0% | |
| !!! | TTTTCAAGTCCTTGTGTTGT+GGG | - | chr4_1:71914573-71914592 | Msa0569900:intron | 35.0% |
| CTGATTCCAAAACCATAGAA+AGG | - | chr4_1:71914637-71914656 | Msa0569900:intron | 35.0% | |
| ! | GTTCTTGATGACTAGCAAAA+AGG | - | chr4_1:71914769-71914788 | Msa0569900:intron | 35.0% |
| GGATTGTTCTTGATTGTTTC+AGG | - | chr4_1:71914803-71914822 | Msa0569900:intron | 35.0% | |
| CAATGTTACCTTTGAACAGT+AGG | + | chr4_1:71914884-71914903 | None:intergenic | 35.0% | |
| TGTCAACTGAATTATGGTCT+CGG | - | chr4_1:71914925-71914944 | Msa0569900:intron | 35.0% | |
| GTGTTTATGCTGTCTACAAA+CGG | - | chr4_1:71914947-71914966 | Msa0569900:intron | 35.0% | |
| ! | AGTCATAGTTTTCTCTGCTA+TGG | - | chr4_1:71915187-71915206 | Msa0569900:intron | 35.0% |
| !!! | TGTGCTGTTTTTACTGCTTA+TGG | - | chr4_1:71915416-71915435 | Msa0569900:CDS | 35.0% |
| ! | TTTTACTGCTTATGGTGCAA+TGG | - | chr4_1:71915424-71915443 | Msa0569900:CDS | 35.0% |
| ! | TTTTCATATATCCGAGCAGT+AGG | - | chr4_1:71915660-71915679 | Msa0569900:intron | 35.0% |
| ATCAACAGCAATTATATCCG+AGG | + | chr4_1:71915764-71915783 | None:intergenic | 35.0% | |
| TCACACAATAAATTCGGCTA+AGG | - | chr4_1:71915828-71915847 | Msa0569900:CDS | 35.0% | |
| GTTCTGGCAATTAAACAATG+AGG | + | chr4_1:71915897-71915916 | None:intergenic | 35.0% | |
| ! | AAATAGACTTGTTCGCAGAA+AGG | - | chr4_1:71916180-71916199 | Msa0569900:CDS | 35.0% |
| ! | TATTCCCATACCCCTAATTT+TGG | + | chr4_1:71916404-71916423 | None:intergenic | 35.0% |
| !! | AAAGTTATTGGCTCATATGG+AGG | - | chr4_1:71916734-71916753 | Msa0569900:intron | 35.0% |
| !! | AAGTTATTGGCTCATATGGA+GGG | - | chr4_1:71916735-71916754 | Msa0569900:intron | 35.0% |
| !! | AAATACACTTTTGAGGAGTC+AGG | - | chr4_1:71916836-71916855 | Msa0569900:intron | 35.0% |
| CTCAACGAAGGAAAAATAGT+CGG | - | chr4_1:71916875-71916894 | Msa0569900:intron | 35.0% | |
| ! | ATAGTATAGCTCTACATTCC+AGG | - | chr4_1:71916914-71916933 | Msa0569900:CDS | 35.0% |
| TGTTGAAGCTGATGCATGTA+CGG | - | chr4_1:71914159-71914178 | Msa0569900:three_prime_UTR | 40.0% | |
| ! | TCAATGGTGAGAGGTTTGTT+GGG | + | chr4_1:71914259-71914278 | None:intergenic | 40.0% |
| TTCAATGGTGAGAGGTTTGT+TGG | + | chr4_1:71914260-71914279 | None:intergenic | 40.0% | |
| ATGAGAAGTTCACCAGCTTT+GGG | + | chr4_1:71914301-71914320 | None:intergenic | 40.0% | |
| TTGCAGCTTAATTGTGGTTG+TGG | - | chr4_1:71914424-71914443 | Msa0569900:CDS | 40.0% | |
| TCATGACATGAAGATCAGAG+TGG | + | chr4_1:71914539-71914558 | None:intergenic | 40.0% | |
| !!! | GTTTTCAAGTCCTTGTGTTG+TGG | - | chr4_1:71914572-71914591 | Msa0569900:intron | 40.0% |
| CAACTTCACCAGTAATCTCA+TGG | + | chr4_1:71914599-71914618 | None:intergenic | 40.0% | |
| ACTGGTGAAGTTGTTGAACA+TGG | - | chr4_1:71914606-71914625 | Msa0569900:intron | 40.0% | |
| GATTGTTTCAGGCTTCCAAT+TGG | - | chr4_1:71914814-71914833 | Msa0569900:intron | 40.0% | |
| CAACTGTTCCTACTGTTCAA+AGG | - | chr4_1:71914873-71914892 | Msa0569900:intron | 40.0% | |
| TTTGCTTATAACCGCGCAAA+AGG | - | chr4_1:71915004-71915023 | Msa0569900:intron | 40.0% | |
| GCAAAAGGAACCTTATACGA+TGG | - | chr4_1:71915019-71915038 | Msa0569900:CDS | 40.0% | |
| TCGAGTTTCACCATCGTATA+AGG | + | chr4_1:71915032-71915051 | None:intergenic | 40.0% | |
| ! | TCGGTATATGGCATTGAGTT+TGG | + | chr4_1:71915380-71915399 | None:intergenic | 40.0% |
| ! | AGAATTGCAGACTCGGTATA+TGG | + | chr4_1:71915392-71915411 | None:intergenic | 40.0% |
| TATACCGAGTCTGCAATTCT+AGG | - | chr4_1:71915392-71915411 | Msa0569900:CDS | 40.0% | |
| ACATCCTAGAATTGCAGACT+CGG | + | chr4_1:71915399-71915418 | None:intergenic | 40.0% | |
| TAACAGCAACAGTATCACCA+GGG | + | chr4_1:71915469-71915488 | None:intergenic | 40.0% | |
| ATAACAGCAACAGTATCACC+AGG | + | chr4_1:71915470-71915489 | None:intergenic | 40.0% | |
| ! | GGTGATACTGTTGCTGTTAT+TGG | - | chr4_1:71915470-71915489 | Msa0569900:intron | 40.0% |
| ! | ACTGTTGCTGTTATTGGAAC+TGG | - | chr4_1:71915476-71915495 | Msa0569900:intron | 40.0% |
| ! | CTGTTGCTGTTATTGGAACT+GGG | - | chr4_1:71915477-71915496 | Msa0569900:intron | 40.0% |
| ! | TGTTGCTGTTATTGGAACTG+GGG | - | chr4_1:71915478-71915497 | Msa0569900:intron | 40.0% |
| TATCTGCAGACAACTGAAAG+CGG | + | chr4_1:71915725-71915744 | None:intergenic | 40.0% | |
| CTAGAGAAAGCAAAGACACT+TGG | - | chr4_1:71915799-71915818 | Msa0569900:CDS | 40.0% | |
| ATTGCCAGAACTATCTTGTG+CGG | - | chr4_1:71915906-71915925 | Msa0569900:intron | 40.0% | |
| TGTTAGGAGCTAATAGACAG+AGG | + | chr4_1:71915932-71915951 | None:intergenic | 40.0% | |
| TTATGCACGATAGTGTGAGT+GGG | + | chr4_1:71915958-71915977 | None:intergenic | 40.0% | |
| TTTATGCACGATAGTGTGAG+TGG | + | chr4_1:71915959-71915978 | None:intergenic | 40.0% | |
| ! | TGTTTTCTCTAACTTCACGC+AGG | - | chr4_1:71916009-71916028 | Msa0569900:intron | 40.0% |
| AACTTCACGCAGGAAATTAC+TGG | - | chr4_1:71916019-71916038 | Msa0569900:intron | 40.0% | |
| CAGGAAATTACTGGTGGAAA+GGG | - | chr4_1:71916028-71916047 | Msa0569900:intron | 40.0% | |
| TGCACACAAAGTGTGAAAGA+TGG | - | chr4_1:71916100-71916119 | Msa0569900:CDS | 40.0% | |
| ACACAAAGTGTGAAAGATGG+AGG | - | chr4_1:71916103-71916122 | Msa0569900:CDS | 40.0% | |
| AAAAGCAGTGATGATTGGAC+TGG | - | chr4_1:71916126-71916145 | Msa0569900:CDS | 40.0% | |
| TCAAGCCAAAATTAGGGGTA+TGG | - | chr4_1:71916396-71916415 | Msa0569900:intron | 40.0% | |
| ! | CAAGCCAAAATTAGGGGTAT+GGG | - | chr4_1:71916397-71916416 | Msa0569900:intron | 40.0% |
| GGGGTATGGGAATAAGAATT+AGG | - | chr4_1:71916410-71916429 | Msa0569900:intron | 40.0% | |
| ACTTCACGTCAATTCTGCTT+TGG | + | chr4_1:71916605-71916624 | None:intergenic | 40.0% | |
| ! | TAAGTGAGGTGCTACACTAA+AGG | + | chr4_1:71916668-71916687 | None:intergenic | 40.0% |
| ! | TTTTTCCTTCGTTGAGATCC+TGG | + | chr4_1:71916871-71916890 | None:intergenic | 40.0% |
| ACGAAGGAAAAATAGTCGGT+CGG | - | chr4_1:71916879-71916898 | Msa0569900:intron | 40.0% | |
| ACTCCAATGTGTGAGACATA+TGG | + | chr4_1:71916962-71916981 | None:intergenic | 40.0% | |
| AGACACCTATATGTGTTCTC+AGG | + | chr4_1:71917002-71917021 | None:intergenic | 40.0% | |
| TTTGCATCTTGCTCATGTAG+TGG | - | chr4_1:71917109-71917128 | Msa0569900:CDS | 40.0% | |
| TCCATTCACACAGAAGCTGT+TGG | - | chr4_1:71914184-71914203 | Msa0569900:three_prime_UTR | 45.0% | |
| ACCAACAGCTTCTGTGTGAA+TGG | + | chr4_1:71914188-71914207 | None:intergenic | 45.0% | |
| GGATTACCATCTTACATGCG+TGG | - | chr4_1:71914217-71914236 | Msa0569900:three_prime_UTR | 45.0% | |
| GATGAGAAGTTCACCAGCTT+TGG | + | chr4_1:71914302-71914321 | None:intergenic | 45.0% | |
| CCAACAACTCGAGATCCAAT+TGG | + | chr4_1:71914832-71914851 | None:intergenic | 45.0% | |
| ! | CCAATTGGATCTCGAGTTGT+TGG | - | chr4_1:71914829-71914848 | Msa0569900:intron | 45.0% |
| GTTGCCACAAGGCATAATGA+AGG | + | chr4_1:71914857-71914876 | None:intergenic | 45.0% | |
| CTGTCTACAAACGGTATGCA+GGG | - | chr4_1:71914956-71914975 | Msa0569900:intron | 45.0% | |
| AAGCTTCGCACAGATCATCA+TGG | + | chr4_1:71914982-71915001 | None:intergenic | 45.0% | |
| ! | CGTATAAGGTTCCTTTTGCG+CGG | + | chr4_1:71915018-71915037 | None:intergenic | 45.0% |
| ! | GAAACTCGACTGTTTCTTCG+AGG | - | chr4_1:71915043-71915062 | Msa0569900:CDS | 45.0% |
| TGTTGTGCCAGCAAATGCAT+TGG | - | chr4_1:71915346-71915365 | Msa0569900:CDS | 45.0% | |
| AATACCGCCAATGCATTTGC+TGG | + | chr4_1:71915356-71915375 | None:intergenic | 45.0% | |
| ! | GTTGCTGTTATTGGAACTGG+GGG | - | chr4_1:71915479-71915498 | Msa0569900:intron | 45.0% |
| ! | CTGCAGATAGCTAGAGCATT+TGG | - | chr4_1:71915736-71915755 | Msa0569900:CDS | 45.0% |
| TAGTGTGAGTGGGTGATGTT+AGG | + | chr4_1:71915948-71915967 | None:intergenic | 45.0% | |
| TTCACGCAGGAAATTACTGG+TGG | - | chr4_1:71916022-71916041 | Msa0569900:intron | 45.0% | |
| GCAGGAAATTACTGGTGGAA+AGG | - | chr4_1:71916027-71916046 | Msa0569900:intron | 45.0% | |
| ! | ACGTTGCTGTTGAAGCCTTA+GGG | - | chr4_1:71916056-71916075 | Msa0569900:CDS | 45.0% |
| AAATGTCTGTGGTCTCCCTA+AGG | + | chr4_1:71916074-71916093 | None:intergenic | 45.0% | |
| GGAGGAAAAGCAGTGATGAT+TGG | - | chr4_1:71916121-71916140 | Msa0569900:CDS | 45.0% | |
| ! | ACAAGCTGGTTCTTTAGGAG+AGG | - | chr4_1:71916150-71916169 | Msa0569900:CDS | 45.0% |
| !!! | CCCTAATTTTGGCTTGAGCA+GGG | + | chr4_1:71916393-71916412 | None:intergenic | 45.0% |
| CCCTGCTCAAGCCAAAATTA+GGG | - | chr4_1:71916390-71916409 | Msa0569900:intron | 45.0% | |
| CCTGCTCAAGCCAAAATTAG+GGG | - | chr4_1:71916391-71916410 | Msa0569900:intron | 45.0% | |
| !! | TTATTGGCTCATATGGAGGG+AGG | - | chr4_1:71916738-71916757 | Msa0569900:intron | 45.0% |
| !! | TATTGGCTCATATGGAGGGA+GGG | - | chr4_1:71916739-71916758 | Msa0569900:intron | 45.0% |
| GAAACAGGTATCTTCGACCT+TGG | - | chr4_1:71916797-71916816 | Msa0569900:intron | 45.0% | |
| TTCTTGTAACAGCATGGCCA+AGG | + | chr4_1:71916817-71916836 | None:intergenic | 45.0% | |
| CGAAGGAAAAATAGTCGGTC+GGG | - | chr4_1:71916880-71916899 | Msa0569900:intron | 45.0% | |
| CTCACACATTGGAGTTGCAA+AGG | - | chr4_1:71916967-71916986 | Msa0569900:CDS | 45.0% | |
| ! | CATTGGAGTTGCAAAGGTGT+TGG | - | chr4_1:71916973-71916992 | Msa0569900:CDS | 45.0% |
| GGTGTCCTGAGAACACATAT+AGG | - | chr4_1:71916994-71917013 | Msa0569900:CDS | 45.0% | |
| AGTGGTGAAAGACTCGTCAT+TGG | - | chr4_1:71917127-71917146 | Msa0569900:CDS | 45.0% | |
| TGGCATCTGCACTAGTTCGT+AGG | - | chr4_1:71914062-71914081 | Msa0569900:three_prime_UTR | 50.0% | |
| CACACAGAAGCTGTTGGTGT+TGG | - | chr4_1:71914190-71914209 | Msa0569900:three_prime_UTR | 50.0% | |
| !! | GAAGCTGTTGGTGTTGGTGT+TGG | - | chr4_1:71914196-71914215 | Msa0569900:three_prime_UTR | 50.0% |
| ACAGCACCACGCATGTAAGA+TGG | + | chr4_1:71914226-71914245 | None:intergenic | 50.0% | |
| ATCTCATGGCCCACAACACA+AGG | + | chr4_1:71914585-71914604 | None:intergenic | 50.0% | |
| GTTGTGGGCCATGAGATTAC+TGG | - | chr4_1:71914588-71914607 | Msa0569900:intron | 50.0% | |
| GGAGCCTTCATTATGCCTTG+TGG | - | chr4_1:71914850-71914869 | Msa0569900:intron | 50.0% | |
| CAGTAGGAACAGTTGCCACA+AGG | + | chr4_1:71914868-71914887 | None:intergenic | 50.0% | |
| GCTGTCTACAAACGGTATGC+AGG | - | chr4_1:71914955-71914974 | Msa0569900:intron | 50.0% | |
| ! | CGACTGTTTCTTCGAGGAAG+TGG | - | chr4_1:71915049-71915068 | Msa0569900:CDS | 50.0% |
| TGTGCCAGCAAATGCATTGG+CGG | - | chr4_1:71915349-71915368 | Msa0569900:CDS | 50.0% | |
| ! | GTTATTGGAACTGGGGGTGT+TGG | - | chr4_1:71915485-71915504 | Msa0569900:intron | 50.0% |
| GTTGATCAGAGCCTACTGCT+CGG | + | chr4_1:71915674-71915693 | None:intergenic | 50.0% | |
| !! | AGCTAGAGCATTTGGTGCCT+CGG | - | chr4_1:71915744-71915763 | Msa0569900:CDS | 50.0% |
| ! | GACGTTGCTGTTGAAGCCTT+AGG | - | chr4_1:71916055-71916074 | Msa0569900:CDS | 50.0% |
| GTGCACTGAGCAAATGTCTG+TGG | + | chr4_1:71916085-71916104 | None:intergenic | 50.0% | |
| !! | ATGATTGGACTGGCACAAGC+TGG | - | chr4_1:71916136-71916155 | Msa0569900:CDS | 50.0% |
| ! | CTGGCACAAGCTGGTTCTTT+AGG | - | chr4_1:71916145-71916164 | Msa0569900:CDS | 50.0% |
| ! | AGCTGGTTCTTTAGGAGAGG+TGG | - | chr4_1:71916153-71916172 | Msa0569900:CDS | 50.0% |
| GCCCTGCTCAAGCCAAAATT+AGG | - | chr4_1:71916389-71916408 | Msa0569900:intron | 50.0% | |
| !!! | CCCCTAATTTTGGCTTGAGC+AGG | + | chr4_1:71916394-71916413 | None:intergenic | 50.0% |
| GCATTCCAGGATCTCAACGA+AGG | - | chr4_1:71916863-71916882 | Msa0569900:intron | 50.0% | |
| ! | GCAATGCTTTTGTGCAGCGA+CGG | - | chr4_1:71916936-71916955 | Msa0569900:CDS | 50.0% |
| CGGCCATATGTCTCACACAT+TGG | - | chr4_1:71916956-71916975 | Msa0569900:CDS | 50.0% | |
| CACATTCCTCGTCCCAAAGC+TGG | - | chr4_1:71914286-71914305 | Msa0569900:exon | 55.0% | |
| !! | AGTTCACCAGCTTTGGGACG+AGG | + | chr4_1:71914295-71914314 | None:intergenic | 55.0% |
| AGTATCACCAGGGCGCACTT+CGG | + | chr4_1:71915459-71915478 | None:intergenic | 55.0% | |
| !! | GAACTGGGGGTGTTGGTTCT+AGG | - | chr4_1:71915492-71915511 | Msa0569900:intron | 55.0% |
| GAGGCCGCACAAGATAGTTC+TGG | + | chr4_1:71915913-71915932 | None:intergenic | 55.0% | |
| ! | GGAGTCAGGCAAAGCATTCC+AGG | - | chr4_1:71916850-71916869 | Msa0569900:intron | 55.0% |
| !! | CGCTGCACAAAAGCATTGCC+TGG | + | chr4_1:71916935-71916954 | None:intergenic | 55.0% |
| GCTCATATGGAGGGAGGGCT+AGG | - | chr4_1:71916744-71916763 | Msa0569900:intron | 60.0% | |
| CATGCAGCCGAAGTGCGCCC+TGG | - | chr4_1:71915449-71915468 | Msa0569900:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 71913981 | 71917231 | 71913981 | ID=Msa0569900;Name=Msa0569900 |
| chr4_1 | mRNA | 71913981 | 71917231 | 71913981 | ID=Msa0569900-mRNA-1;Parent=Msa0569900;Name=Msa0569900-mRNA-1;_AED=0.07;_eAED=0.07;_QI=80|0.85|0.87|1|1|1|8|309|463 |
| chr4_1 | exon | 71913981 | 71914481 | 71913981 | ID=Msa0569900-mRNA-1:exon:24522;Parent=Msa0569900-mRNA-1 |
| chr4_1 | exon | 71915011 | 71915181 | 71915011 | ID=Msa0569900-mRNA-1:exon:24521;Parent=Msa0569900-mRNA-1 |
| chr4_1 | exon | 71915339 | 71915480 | 71915339 | ID=Msa0569900-mRNA-1:exon:24520;Parent=Msa0569900-mRNA-1 |
| chr4_1 | exon | 71915699 | 71915912 | 71915699 | ID=Msa0569900-mRNA-1:exon:24519;Parent=Msa0569900-mRNA-1 |
| chr4_1 | exon | 71916040 | 71916235 | 71916040 | ID=Msa0569900-mRNA-1:exon:24518;Parent=Msa0569900-mRNA-1 |
| chr4_1 | exon | 71916318 | 71916387 | 71916318 | ID=Msa0569900-mRNA-1:exon:24517;Parent=Msa0569900-mRNA-1 |
| chr4_1 | exon | 71916554 | 71916689 | 71916554 | ID=Msa0569900-mRNA-1:exon:24516;Parent=Msa0569900-mRNA-1 |
| chr4_1 | exon | 71916881 | 71917231 | 71916881 | ID=Msa0569900-mRNA-1:exon:24515;Parent=Msa0569900-mRNA-1 |
| chr4_1 | five_prime_UTR | 71917152 | 71917231 | 71917152 | ID=Msa0569900-mRNA-1:five_prime_utr;Parent=Msa0569900-mRNA-1 |
| chr4_1 | CDS | 71916881 | 71917151 | 71916881 | ID=Msa0569900-mRNA-1:cds;Parent=Msa0569900-mRNA-1 |
| chr4_1 | CDS | 71916554 | 71916689 | 71916554 | ID=Msa0569900-mRNA-1:cds;Parent=Msa0569900-mRNA-1 |
| chr4_1 | CDS | 71916318 | 71916387 | 71916318 | ID=Msa0569900-mRNA-1:cds;Parent=Msa0569900-mRNA-1 |
| chr4_1 | CDS | 71916040 | 71916235 | 71916040 | ID=Msa0569900-mRNA-1:cds;Parent=Msa0569900-mRNA-1 |
| chr4_1 | CDS | 71915699 | 71915912 | 71915699 | ID=Msa0569900-mRNA-1:cds;Parent=Msa0569900-mRNA-1 |
| chr4_1 | CDS | 71915339 | 71915480 | 71915339 | ID=Msa0569900-mRNA-1:cds;Parent=Msa0569900-mRNA-1 |
| chr4_1 | CDS | 71915011 | 71915181 | 71915011 | ID=Msa0569900-mRNA-1:cds;Parent=Msa0569900-mRNA-1 |
| chr4_1 | CDS | 71914290 | 71914481 | 71914290 | ID=Msa0569900-mRNA-1:cds;Parent=Msa0569900-mRNA-1 |
| chr4_1 | three_prime_UTR | 71913981 | 71914289 | 71913981 | ID=Msa0569900-mRNA-1:three_prime_utr;Parent=Msa0569900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
