AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene54574


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54574.t1 MTR_4g066640 96.230 504 19 0 1 504 11 514 0.0 1008
MS.gene54574.t1 MTR_4g066580 69.703 505 149 2 2 503 12 515 0.0 755
MS.gene54574.t1 MTR_4g066640 94.987 379 19 0 1 379 11 389 0.0 750
MS.gene54574.t1 MTR_3g028720 67.928 502 157 2 5 503 14 514 0.0 736
MS.gene54574.t1 MTR_4g066630 67.742 496 156 2 9 501 19 513 0.0 723
MS.gene54574.t1 MTR_2g098520 68.789 487 148 2 20 503 25 510 0.0 720
MS.gene54574.t1 MTR_4g066590 67.677 495 155 3 10 501 15 507 0.0 717
MS.gene54574.t1 MTR_2g098540 67.525 505 155 5 4 503 7 507 0.0 714
MS.gene54574.t1 MTR_2g098790 66.331 496 162 3 12 503 20 514 0.0 706
MS.gene54574.t1 MTR_6g078450 65.868 501 163 4 10 503 13 512 0.0 701
MS.gene54574.t1 MTR_4g066240 61.736 507 190 2 1 504 8 513 0.0 678
MS.gene54574.t1 MTR_6g078330 63.241 506 174 4 4 503 14 513 0.0 676
MS.gene54574.t1 MTR_4g066210 63.434 495 174 3 16 504 27 520 0.0 676
MS.gene54574.t1 MTR_2g098540 69.063 459 138 2 48 503 6 463 0.0 676
MS.gene54574.t1 MTR_4g066240 61.614 508 190 3 1 504 8 514 0.0 673
MS.gene54574.t1 MTR_3g028720 68.904 447 135 2 5 448 14 459 0.0 662
MS.gene54574.t1 MTR_4g066330 63.473 501 157 3 5 503 17 493 0.0 661
MS.gene54574.t1 MTR_6g078380 63.944 502 172 5 10 503 13 513 0.0 660
MS.gene54574.t1 MTR_4g066280 60.878 501 170 3 6 504 18 494 0.0 648
MS.gene54574.t1 MTR_4g066630 68.109 439 136 2 12 447 22 459 0.0 645
MS.gene54574.t1 MTR_5g071520 60.811 518 187 4 1 503 8 524 0.0 638
MS.gene54574.t1 MTR_4g066580 70.096 418 121 2 2 416 12 428 0.0 621
MS.gene54574.t1 MTR_6g078450 65.695 446 145 4 10 448 13 457 0.0 619
MS.gene54574.t1 MTR_3g028720 69.249 413 123 2 5 414 14 425 0.0 608
MS.gene54574.t1 MTR_4g066340 65.138 436 148 2 72 504 6 440 0.0 605
MS.gene54574.t1 MTR_4g066630 68.069 404 125 2 12 412 22 424 0.0 592
MS.gene54574.t1 MTR_3g026280 57.829 479 193 4 28 503 21 493 0.0 577
MS.gene54574.t1 MTR_6g078330 65.122 410 139 2 97 503 1 409 0.0 574
MS.gene54574.t1 MTR_4g015420 56.016 507 173 9 15 503 51 525 0.0 569
MS.gene54574.t1 MTR_4g067040 67.513 394 124 2 10 400 15 407 0.0 568
MS.gene54574.t1 MTR_4g023000 55.649 478 204 4 28 503 23 494 0.0 565
MS.gene54574.t1 MTR_4g066240 60.723 415 159 2 1 412 8 421 0.0 546
MS.gene54574.t1 MTR_3g028720 67.632 380 119 2 5 381 14 392 0.0 546
MS.gene54574.t1 MTR_3g026400 54.224 509 220 6 1 503 8 509 0.0 545
MS.gene54574.t1 MTR_4g015460 55.098 510 192 9 6 504 19 502 0.0 542
MS.gene54574.t1 MTR_6g078330 61.800 411 151 3 96 503 2 409 0.0 541
MS.gene54574.t1 MTR_2g043200 55.882 476 178 7 34 503 70 519 0.0 541
MS.gene54574.t1 MTR_4g067040 68.293 369 113 2 10 375 15 382 0.0 537
MS.gene54574.t1 MTR_4g083000 51.953 512 220 8 2 502 6 502 0.0 531
MS.gene54574.t1 MTR_4g066630 67.590 361 113 2 12 369 22 381 0.0 521
MS.gene54574.t1 MTR_3g026400 55.870 460 197 4 46 503 23 478 0.0 520
MS.gene54574.t1 MTR_3g026620 52.465 507 233 5 1 503 8 510 1.60e-180 516
MS.gene54574.t1 MTR_5g044000 49.526 527 223 9 7 501 5 520 1.04e-175 504
MS.gene54574.t1 MTR_6g078330 62.873 369 125 4 4 366 14 376 7.90e-169 482
MS.gene54574.t1 MTR_0110s0040 48.915 507 246 8 1 503 15 512 2.65e-165 478
MS.gene54574.t1 MTR_4g081530 49.588 486 225 7 28 502 23 499 3.92e-163 472
MS.gene54574.t1 MTR_0110s0030 47.732 507 252 8 1 503 15 512 3.49e-162 470
MS.gene54574.t1 MTR_3g033810 47.379 477 240 5 26 502 18 483 2.66e-157 456
MS.gene54574.t1 MTR_3g033790 47.046 474 239 6 29 502 19 480 8.84e-155 450
MS.gene54574.t1 MTR_4g131810 45.842 493 248 6 15 501 24 503 1.51e-151 443
MS.gene54574.t1 MTR_2g022760 46.960 477 246 5 32 504 39 512 5.95e-150 439
MS.gene54574.t1 MTR_4g083000 51.799 417 181 5 97 502 1 408 1.34e-147 429
MS.gene54574.t1 MTR_4g131800 48.000 475 239 6 34 504 521 991 4.99e-145 442
MS.gene54574.t1 MTR_2g022710 44.639 513 264 9 1 504 9 510 1.19e-141 417
MS.gene54574.t1 MTR_7g068910 44.606 482 245 8 28 503 30 495 1.43e-141 417
MS.gene54574.t1 MTR_5g068740 44.882 508 248 11 3 502 6 489 2.09e-141 417
MS.gene54574.t1 MTR_7g033860 44.720 483 240 8 31 504 50 514 4.10e-141 416
MS.gene54574.t1 MTR_3g026400 56.720 372 148 6 1 366 8 372 5.25e-141 410
MS.gene54574.t1 MTR_2g079550 42.717 508 269 8 1 501 9 501 6.21e-141 416
MS.gene54574.t1 MTR_2g079580 42.323 508 271 8 1 501 11 503 6.55e-141 416
MS.gene54574.t1 MTR_1g088610 45.276 508 245 10 3 502 6 488 6.03e-139 415
MS.gene54574.t1 MTR_1g088610 40.171 117 63 2 387 502 503 613 1.49e-17 86.3
MS.gene54574.t1 MTR_7g068910 43.699 492 245 9 28 503 30 505 2.66e-138 409
MS.gene54574.t1 MTR_0108s0030 43.671 474 240 4 31 504 5 451 5.78e-138 406
MS.gene54574.t1 MTR_4g016920 45.094 479 241 9 29 501 27 489 1.27e-134 400
MS.gene54574.t1 MTR_7g051650 44.093 474 246 6 30 501 76 532 2.56e-124 374
MS.gene54574.t1 MTR_7g051510 43.606 477 249 7 30 504 76 534 2.99e-124 374
MS.gene54574.t1 MTR_7g051610 43.487 476 251 5 30 504 76 534 8.49e-123 370
MS.gene54574.t1 MTR_7g051650 43.671 474 244 6 30 501 76 528 9.12e-123 370
MS.gene54574.t1 MTR_0110s0040 51.099 364 168 6 1 360 15 372 2.59e-122 364
MS.gene54574.t1 MTR_2g022760 46.117 412 215 5 97 504 1 409 5.85e-122 363
MS.gene54574.t1 MTR_2g022710 44.176 455 235 8 3 448 11 455 4.41e-121 363
MS.gene54574.t1 MTR_2g022710 44.176 455 235 8 3 448 11 455 1.03e-120 362
MS.gene54574.t1 MTR_1g088630 44.372 462 207 10 48 502 14 432 5.49e-120 360
MS.gene54574.t1 MTR_2g079580 44.153 419 213 7 1 412 11 415 1.52e-119 357
MS.gene54574.t1 MTR_2g022710 46.301 419 206 8 3 412 11 419 1.50e-118 355
MS.gene54574.t1 MTR_7g068900 44.076 422 206 9 92 502 17 419 5.86e-114 345
MS.gene54574.t1 MTR_2g022710 43.961 414 221 6 97 504 1 409 9.27e-113 340
MS.gene54574.t1 MTR_2g022710 45.700 407 202 8 3 400 11 407 1.94e-112 339
MS.gene54574.t1 MTR_4g016920 44.282 411 208 8 97 501 1 396 5.41e-109 331
MS.gene54574.t1 MTR_1g088630 51.420 317 120 5 28 340 26 312 7.79e-105 318
MS.gene54574.t1 MTR_2g022710 46.597 382 185 8 3 375 11 382 1.41e-104 319
MS.gene54574.t1 MTR_7g056747 42.410 415 215 6 91 504 9 400 2.12e-100 308
MS.gene54574.t1 MTR_1g088630 52.963 270 117 4 28 293 26 289 1.11e-93 287
MS.gene54574.t1 MTR_4g016920 52.988 251 112 3 97 344 1 248 5.12e-87 270
MS.gene54574.t1 MTR_0110s0020 49.259 270 128 5 1 266 15 279 1.82e-86 269
MS.gene54574.t1 MTR_5g069350 40.462 173 62 5 341 503 48 189 3.10e-28 111
MS.gene54574.t1 MTR_4g122980 26.620 432 233 16 70 493 169 524 1.91e-24 107
MS.gene54574.t1 MTR_8g038650 46.392 97 51 1 252 348 57 152 1.36e-20 89.0
MS.gene54574.t1 MTR_8g038650 50.000 54 26 1 38 91 7 59 3.33e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54574.t1 AT5G44640 54.314 510 216 7 2 504 8 507 0.0 565
MS.gene54574.t1 AT5G42260 54.600 500 215 6 2 497 6 497 0.0 557
MS.gene54574.t1 AT2G44450 55.372 484 203 5 21 501 27 500 0.0 556
MS.gene54574.t1 AT2G44480 54.832 476 212 2 28 501 34 508 0.0 547
MS.gene54574.t1 AT2G44480 54.832 476 212 2 28 501 65 539 0.0 547
MS.gene54574.t1 AT3G60130 53.766 478 211 5 29 502 30 501 0.0 529
MS.gene54574.t1 AT2G25630 51.896 501 214 6 5 501 6 483 0.0 521
MS.gene54574.t1 AT1G26560 53.527 482 214 6 26 501 29 506 5.20e-178 510
MS.gene54574.t1 AT5G24550 48.833 514 247 8 1 504 5 512 1.37e-175 504
MS.gene54574.t1 AT3G60140 48.560 486 236 5 28 504 25 505 3.56e-172 498
MS.gene54574.t1 AT3G60120 50.312 481 232 5 28 503 13 491 4.04e-171 493
MS.gene54574.t1 AT3G18080 51.029 486 224 8 24 504 34 510 1.14e-170 491
MS.gene54574.t1 AT5G54570 49.691 485 225 6 28 501 29 505 6.39e-170 490
MS.gene54574.t1 AT5G24540 48.263 518 241 7 1 504 8 512 2.14e-169 489
MS.gene54574.t1 AT1G51470 49.263 475 233 5 29 503 45 511 2.31e-169 488
MS.gene54574.t1 AT2G44490 49.687 479 233 5 31 502 16 493 1.89e-167 485
MS.gene54574.t1 AT1G47600 49.057 477 231 6 29 503 45 511 5.57e-167 482
MS.gene54574.t1 AT1G47600 48.847 477 231 6 29 503 45 510 1.48e-166 481
MS.gene54574.t1 AT2G44460 48.676 491 237 6 20 501 20 504 7.42e-164 476
MS.gene54574.t1 AT3G18070 48.057 489 232 9 21 504 22 493 7.22e-162 468
MS.gene54574.t1 AT2G44470 46.217 489 257 4 20 503 20 507 1.53e-161 471
MS.gene54574.t1 AT3G18070 48.262 489 237 9 21 504 22 499 1.11e-160 466
MS.gene54574.t1 AT2G44480 53.317 407 187 2 97 501 1 406 6.36e-160 460
MS.gene54574.t1 AT5G25980 46.875 512 255 11 1 502 19 523 2.17e-157 459
MS.gene54574.t1 AT3G60130 53.365 416 184 5 91 502 40 449 7.86e-157 454
MS.gene54574.t1 AT2G32860 47.699 478 244 4 29 501 94 570 3.59e-156 458
MS.gene54574.t1 AT2G32860 47.490 478 246 3 29 501 94 571 2.44e-155 456
MS.gene54574.t1 AT3G09260 46.458 480 250 5 29 503 35 512 9.20e-155 451
MS.gene54574.t1 AT1G75940 46.507 501 254 8 11 501 21 517 4.03e-154 450
MS.gene54574.t1 AT5G36890 47.257 474 237 6 31 502 18 480 4.89e-154 448
MS.gene54574.t1 AT5G36890 47.257 474 237 6 31 502 18 480 6.20e-154 448
MS.gene54574.t1 AT3G03640 44.597 509 272 6 2 503 9 514 9.31e-151 441
MS.gene54574.t1 AT5G54570 49.884 431 198 5 28 448 29 451 2.14e-150 437
MS.gene54574.t1 AT1G66280 44.379 507 272 6 1 501 8 510 9.51e-150 438
MS.gene54574.t1 AT3G60130 52.163 416 178 6 91 502 40 438 1.55e-148 433
MS.gene54574.t1 AT1G66270 44.578 498 260 7 18 503 19 512 8.07e-148 434
MS.gene54574.t1 AT3G21370 45.267 486 248 8 29 502 33 512 3.31e-147 432
MS.gene54574.t1 AT5G26000 48.434 479 228 10 33 501 42 511 8.54e-147 431
MS.gene54574.t1 AT1G02850 47.107 484 221 10 30 502 27 486 8.70e-147 430
MS.gene54574.t1 AT1G52400 45.294 510 264 9 2 502 13 516 1.01e-146 431
MS.gene54574.t1 AT1G52400 45.294 510 264 9 2 502 13 516 1.01e-146 431
MS.gene54574.t1 AT5G24540 49.769 432 195 5 29 447 32 454 1.23e-146 428
MS.gene54574.t1 AT5G28510 43.249 511 276 7 1 501 13 519 4.61e-146 429
MS.gene54574.t1 AT1G66270 44.177 498 260 8 18 503 19 510 3.29e-144 424
MS.gene54574.t1 AT1G02850 45.168 507 220 11 30 502 27 509 3.04e-142 419
MS.gene54574.t1 AT2G44470 46.528 432 226 3 20 447 20 450 3.08e-142 417
MS.gene54574.t1 AT5G25980 46.930 456 227 9 1 448 19 467 7.74e-142 416
MS.gene54574.t1 AT5G25980 46.930 456 227 9 1 448 19 467 7.74e-142 416
MS.gene54574.t1 AT1G61820 45.816 478 251 7 32 504 33 507 8.43e-142 418
MS.gene54574.t1 AT1G02850 45.276 508 219 12 30 502 27 510 1.61e-140 415
MS.gene54574.t1 AT3G60140 48.615 397 191 4 28 416 25 416 4.20e-139 409
MS.gene54574.t1 AT4G27830 44.306 483 246 8 25 501 19 484 3.91e-138 408
MS.gene54574.t1 AT1G60090 43.195 507 256 10 1 502 4 483 7.92e-138 407
MS.gene54574.t1 AT4G22100 44.468 479 244 8 31 504 24 485 3.27e-137 406
MS.gene54574.t1 AT4G27820 46.042 480 232 9 29 501 23 482 1.08e-136 404
MS.gene54574.t1 AT1G02850 45.248 484 203 10 30 502 27 459 1.89e-135 400
MS.gene54574.t1 AT2G44450 53.803 355 155 4 150 501 1 349 2.45e-135 395
MS.gene54574.t1 AT1G60090 42.578 512 259 11 1 502 4 490 4.72e-135 400
MS.gene54574.t1 AT4G21760 43.487 476 248 8 34 501 59 521 1.69e-134 400
MS.gene54574.t1 AT1G45191 44.748 476 239 8 30 502 30 484 1.80e-134 399
MS.gene54574.t1 AT5G54570 47.356 416 200 6 97 501 1 408 6.40e-134 395
MS.gene54574.t1 AT1G45191 43.933 478 246 8 30 502 30 490 1.01e-132 394
MS.gene54574.t1 AT1G61810 44.491 481 259 7 29 504 33 510 6.16e-132 393
MS.gene54574.t1 AT5G26000 46.004 463 226 10 1 448 3 456 7.20e-132 390
MS.gene54574.t1 AT2G44480 59.295 312 123 3 28 337 65 374 9.57e-132 388
MS.gene54574.t1 AT1G45191 43.711 485 242 9 30 502 30 495 2.88e-131 391
MS.gene54574.t1 AT4G21760 42.857 476 241 9 34 501 59 511 4.95e-129 386
MS.gene54574.t1 AT1G45191 43.089 492 247 10 30 502 30 507 1.44e-128 384
MS.gene54574.t1 AT1G52400 45.374 454 234 8 2 447 13 460 1.04e-127 380
MS.gene54574.t1 AT3G62750 41.667 480 250 10 26 501 20 473 1.00e-125 376
MS.gene54574.t1 AT3G62750 41.667 480 250 10 26 501 46 499 3.01e-125 376
MS.gene54574.t1 AT1G61810 44.301 465 251 7 29 488 33 494 1.82e-124 374
MS.gene54574.t1 AT2G44470 46.400 375 196 3 21 391 21 394 1.71e-121 362
MS.gene54574.t1 AT3G62740 40.246 487 268 9 18 501 12 478 1.04e-119 361
MS.gene54574.t1 AT1G02850 46.394 416 172 9 30 412 27 424 1.88e-118 355
MS.gene54574.t1 AT5G48375 44.671 441 168 11 29 463 38 408 2.63e-117 352
MS.gene54574.t1 AT3G18070 51.070 327 152 5 21 345 22 342 5.48e-112 337
MS.gene54574.t1 AT1G60270 48.266 346 168 5 29 370 24 362 7.94e-111 334
MS.gene54574.t1 AT4G27830 43.309 411 212 7 97 501 1 396 1.19e-110 335
MS.gene54574.t1 AT4G27820 44.660 412 206 8 97 501 1 397 2.13e-108 329
MS.gene54574.t1 AT4G27820 44.660 412 206 8 97 501 1 397 2.13e-108 329
MS.gene54574.t1 AT2G44460 47.383 363 177 5 148 501 1 358 2.65e-108 329
MS.gene54574.t1 AT3G62750 40.783 434 228 9 26 456 46 453 3.95e-107 327
MS.gene54574.t1 AT1G45191 48.060 335 162 5 30 360 30 356 1.11e-106 324
MS.gene54574.t1 AT1G45191 48.060 335 162 5 30 360 30 356 1.47e-106 324
MS.gene54574.t1 AT1G61810 44.118 408 220 7 102 504 6 410 4.92e-106 323
MS.gene54574.t1 AT1G51490 47.414 348 162 6 38 379 29 361 1.01e-105 322
MS.gene54574.t1 AT1G61810 44.987 389 207 6 29 412 33 419 2.42e-105 321
MS.gene54574.t1 AT3G62740 40.046 432 237 8 18 447 12 423 1.46e-102 314
MS.gene54574.t1 AT2G44480 49.175 303 151 2 201 501 1 302 6.28e-101 306
MS.gene54574.t1 AT3G18070 47.112 329 163 6 181 504 100 422 1.98e-99 306
MS.gene54574.t1 AT3G18070 54.930 71 31 1 21 91 22 91 7.37e-18 86.3
MS.gene54574.t1 AT3G62750 44.152 342 171 6 26 367 20 341 2.49e-98 301
MS.gene54574.t1 AT3G62750 44.152 342 171 6 26 367 20 341 2.49e-98 301
MS.gene54574.t1 AT3G62750 40.098 409 220 9 97 501 1 388 1.14e-97 301
MS.gene54574.t1 AT3G62750 40.098 409 220 9 97 501 1 388 1.14e-97 301
MS.gene54574.t1 AT3G62750 44.152 342 171 6 26 367 46 367 2.73e-97 301
MS.gene54574.t1 AT1G61820 43.869 367 199 6 143 504 4 368 7.55e-97 298
MS.gene54574.t1 AT3G18070 46.519 316 158 6 194 504 1 310 9.16e-94 288
MS.gene54574.t1 AT1G61810 51.311 267 126 3 32 296 36 300 3.96e-88 273
MS.gene54574.t1 AT1G60270 47.122 278 140 4 97 370 1 275 9.38e-82 256
MS.gene54574.t1 AT3G18070 46.862 239 119 4 181 414 100 335 2.33e-67 220
MS.gene54574.t1 AT3G18070 54.930 71 31 1 21 91 22 91 4.51e-18 85.9
MS.gene54574.t1 AT3G18070 46.018 226 114 4 194 414 1 223 7.90e-62 202
MS.gene54574.t1 AT5G16580 39.161 286 159 4 175 458 27 299 1.42e-53 183
MS.gene54574.t1 AT3G06510 25.714 420 235 14 92 502 159 510 3.80e-26 112
MS.gene54574.t1 AT3G06510 25.173 433 255 13 92 502 159 544 1.99e-24 107

Find 111 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGGTTTATTTCAGGTTTA+TGG 0.080477 4.3:+37377621 MS.gene54574:intron
TTTCCACATGGCTTCATCTT+TGG 0.171482 4.3:+37372786 MS.gene54574:CDS
TTCCACATGGCTTCATCTTT+GGG 0.181839 4.3:+37372787 MS.gene54574:CDS
AGATCACTTGATTTCCAATT+TGG 0.198633 4.3:+37377195 MS.gene54574:CDS
AAAGAAATTTACCTGATATT+TGG 0.203653 4.3:-37376950 None:intergenic
TGATTATGTGTAACTATATA+AGG 0.212347 4.3:-37376889 None:intergenic
ACATGTTTGGGTGGTAATTC+TGG 0.227903 4.3:+37376859 MS.gene54574:CDS
ACAATTGCAGTTGAACAAAA+TGG 0.236440 4.3:+37377959 MS.gene54574:intron
GACTTACTTGGGAGTATTCT+TGG 0.244929 4.3:-37376219 None:intergenic
TAATTAATTACCATCCAAAT+TGG 0.248365 4.3:-37377209 None:intergenic
ATATATAGGCTGCTTCAATT+TGG 0.265595 4.3:+37378155 MS.gene54574:intron
TTCTGTAGAAGAAGCTCTTT+TGG 0.269060 4.3:+37378466 MS.gene54574:CDS
CATTGCCTTGTGGAGGTAAA+TGG 0.282756 4.3:-37377789 None:intergenic
GACTGTAATGAATGGTTTGC+AGG 0.311829 4.3:+37378752 MS.gene54574:CDS
GCAGGCTTTACTGTTCGTTT+TGG 0.320577 4.3:+37378770 MS.gene54574:CDS
AATGGTTCATTTGATTTCAT+TGG 0.321404 4.3:+37377736 MS.gene54574:CDS
GTGGTAGAGGACCAAGTATC+TGG 0.325786 4.3:+37373408 MS.gene54574:CDS
ATGTTCTAGCCCAACATGTT+TGG 0.329686 4.3:+37376846 MS.gene54574:CDS
GATTATGAAGGATCAGAATA+TGG 0.342816 4.3:+37376170 MS.gene54574:CDS
GTGGTCTACATTACTGAAAA+TGG 0.345716 4.3:+37378244 MS.gene54574:CDS
GATCTTTGCTTCAAGGAATT+CGG 0.349501 4.3:+37376736 MS.gene54574:CDS
AACTTTGTTGATTACAATGA+TGG 0.357887 4.3:+37378797 MS.gene54574:CDS
CTATGCTGATCTTTGCTTCA+AGG 0.368377 4.3:+37376729 MS.gene54574:CDS
TGTTCTAGCCCAACATGTTT+GGG 0.369906 4.3:+37376847 MS.gene54574:CDS
TACCATTGAGCAGAAAGCTT+TGG 0.373266 4.3:-37378833 None:intergenic
ACCATTGAGCAGAAAGCTTT+GGG 0.379817 4.3:-37378832 None:intergenic
GCATATCAAAAGGGCAAGAT+AGG 0.386935 4.3:+37377102 MS.gene54574:CDS
TGACCAATACCATCGCTATA+AGG 0.400152 4.3:+37374980 MS.gene54574:CDS
AAAAGATCTCGAAGTCCTCT+TGG 0.415218 4.3:-37378190 None:intergenic
TCGGAGATAGAGTGAAGTAC+TGG 0.425135 4.3:+37376755 MS.gene54574:CDS
ATACTCGTCTTCTAAGACTT+GGG 0.426002 4.3:-37376586 None:intergenic
CAACCTCATCAACGAATTGT+TGG 0.435996 4.3:+37376405 MS.gene54574:CDS
GGATAATCTCCGGTTGTTAG+TGG 0.445923 4.3:-37377646 None:intergenic
CATGGCTTCATCTTTGGGGC+AGG 0.446943 4.3:+37372792 MS.gene54574:CDS
ATTTAGTAAACTTAGGCAAT+CGG 0.451162 4.3:-37377696 None:intergenic
GCATAACATTGGTAACAAAC+TGG 0.451582 4.3:+37377124 MS.gene54574:CDS
CAATAGCATACCCGATCAAA+AGG 0.455559 4.3:+37377164 MS.gene54574:CDS
TGTGTATAAGACCAAATATC+AGG 0.464035 4.3:+37376939 MS.gene54574:CDS
ATCAACGAATTGTTGGCTAA+TGG 0.467305 4.3:+37376412 MS.gene54574:CDS
CAAACATGTATATAGTTTGA+AGG 0.469332 4.3:+37373371 MS.gene54574:intron
TATTACTACAGGAAGATGTT+GGG 0.470013 4.3:+37376148 MS.gene54574:intron
TTATTACTACAGGAAGATGT+TGG 0.473846 4.3:+37376147 MS.gene54574:intron
ATATGTGCAGGCATATCAAA+AGG 0.475467 4.3:+37377092 MS.gene54574:intron
CCTATAGATTCTCAATCGCT+TGG 0.475831 4.3:+37376196 MS.gene54574:CDS
CAAGTCTTAGAAGACGAGTA+TGG 0.476058 4.3:+37376588 MS.gene54574:CDS
ATAGTTTGAAGGTGCAGTAA+AGG 0.476392 4.3:+37373382 MS.gene54574:intron
GTCACACTTACTTCCGCAAA+TGG 0.477728 4.3:+37372714 MS.gene54574:CDS
GCAGTAAAGGAAGGTGGTAG+AGG 0.488218 4.3:+37373395 MS.gene54574:CDS
ACCCAAAGCTTTCTGCTCAA+TGG 0.488244 4.3:+37378831 MS.gene54574:CDS
TGAAACTTCAACTCCATTTG+CGG 0.489529 4.3:-37372727 None:intergenic
TTACATGAAGTATTAGTCAT+AGG 0.489885 4.3:-37377835 None:intergenic
CCAAGCGATTGAGAATCTAT+AGG 0.495495 4.3:-37376196 None:intergenic
ATAGGATCTGTTAAGTAACT+TGG 0.496012 4.3:-37377817 None:intergenic
GATTGCAATTTAGTAAACTT+AGG 0.496766 4.3:-37377703 None:intergenic
CAGGGCCGGCTCGAATGTAA+AGG 0.500785 4.3:+37378706 MS.gene54574:intron
CACTTGATTTCCAATTTGGA+TGG 0.501943 4.3:+37377199 MS.gene54574:CDS
GTGAAGGTGTCCCAGATACT+TGG 0.503819 4.3:-37373419 None:intergenic
CATACTCGTCTTCTAAGACT+TGG 0.503889 4.3:-37376587 None:intergenic
AGTAATGGTGGATATGCAAT+GGG 0.504655 4.3:+37376805 MS.gene54574:CDS
AATTACCACCCAAACATGTT+GGG 0.506442 4.3:-37376855 None:intergenic
GTACCTTATAGCGATGGTAT+TGG 0.507757 4.3:-37374983 None:intergenic
GTGGAAAACTACTCCGACTC+AGG 0.514523 4.3:-37372770 None:intergenic
AGGGCCGGCTCGAATGTAAA+GGG 0.522499 4.3:+37378707 MS.gene54574:intron
TTGCAATCAAAGCTAGTGAA+TGG 0.522902 4.3:+37377718 MS.gene54574:CDS
ATTACAATGATGGATTGAAA+AGG 0.524209 4.3:+37378807 MS.gene54574:CDS
GAATTACCACCCAAACATGT+TGG 0.526460 4.3:-37376856 None:intergenic
TTTATGGAACCACTAACAAC+CGG 0.531294 4.3:+37377637 MS.gene54574:CDS
GAGCCATGGTTGTTTAGTAA+TGG 0.533702 4.3:+37376790 MS.gene54574:CDS
TCCACATGGCTTCATCTTTG+GGG 0.537348 4.3:+37372788 MS.gene54574:CDS
CCATGGTTGTTTAGTAATGG+TGG 0.540507 4.3:+37376793 MS.gene54574:CDS
GGATCTGTTAAGTAACTTGG+AGG 0.542167 4.3:-37377814 None:intergenic
ACCTTCACCCATCAACATCC+AGG 0.542518 4.3:+37373434 MS.gene54574:CDS
ATGGAAAACCTCTAGGTCCA+AGG 0.542893 4.3:+37377978 MS.gene54574:CDS
ACAAACTGGTTCATACCACT+TGG 0.548348 4.3:+37377138 MS.gene54574:CDS
AACAACAAAGAGAGCAAGCA+TGG 0.551044 4.3:-37372685 None:intergenic
AAAATAGAGGGGAAGTTGAG+TGG 0.552316 4.3:+37376349 MS.gene54574:intron
GGGTTACATTTAACGAGCCA+TGG 0.553181 4.3:+37376776 MS.gene54574:CDS
GAACAAAATGGAAAACCTCT+AGG 0.554211 4.3:+37377971 MS.gene54574:CDS
GAAAGATTATTACTTGATTG+CGG 0.555386 4.3:-37378537 None:intergenic
TAGCCAACAATTCGTTGATG+AGG 0.556574 4.3:-37376408 None:intergenic
TTTGAAGGTGCAGTAAAGGA+AGG 0.559649 4.3:+37373386 MS.gene54574:CDS
TGGTAGAGGACCAAGTATCT+GGG 0.567259 4.3:+37373409 MS.gene54574:CDS
GAAGGTGCAGTAAAGGAAGG+TGG 0.572564 4.3:+37373389 MS.gene54574:CDS
AAATCCCTTTACATTCGAGC+CGG 0.581654 4.3:-37378711 None:intergenic
TGGAAAACCTCTAGGTCCAA+GGG 0.581920 4.3:+37377979 MS.gene54574:CDS
GGAAGATGTTGGGATTATGA+AGG 0.590173 4.3:+37376158 MS.gene54574:intron
CGGAGATAGAGTGAAGTACT+GGG 0.599926 4.3:+37376756 MS.gene54574:CDS
TTGACATCGGTAACCTGAGT+CGG 0.604682 4.3:+37372757 MS.gene54574:CDS
TATGTGCAGGCATATCAAAA+GGG 0.610603 4.3:+37377093 MS.gene54574:intron
CTTGGAGGAGCATTGCCTTG+TGG 0.612202 4.3:-37377799 None:intergenic
GCAATGGGAACAACAGCACC+AGG 0.613253 4.3:+37376820 MS.gene54574:CDS
GAGCTAGTACCTTATAGCGA+TGG 0.616078 4.3:-37374989 None:intergenic
TGGATATACGTTTATCCAAG+AGG 0.618701 4.3:+37378175 MS.gene54574:CDS
AGTGGAGGCATAAATCATGA+AGG 0.618703 4.3:+37376367 MS.gene54574:CDS
GGAGGAGCATTGCCTTGTGG+AGG 0.623056 4.3:-37377796 None:intergenic
GGGCAAGATAGGCATAACAT+TGG 0.623136 4.3:+37377113 MS.gene54574:CDS
ACCTGGATGTTGATGGGTGA+AGG 0.626176 4.3:-37373435 None:intergenic
TACTCGTCTTCTAAGACTTG+GGG 0.626972 4.3:-37376585 None:intergenic
AGACTTACCCTTGGACCTAG+AGG 0.628477 4.3:-37377986 None:intergenic
TAGTAATGGTGGATATGCAA+TGG 0.631646 4.3:+37376804 MS.gene54574:CDS
GTTTCAACTCCTCTTGACAT+CGG 0.633221 4.3:+37372744 MS.gene54574:CDS
CTCAGGTTACCGATGTCAAG+AGG 0.636690 4.3:-37372753 None:intergenic
GTCTTAGAAGACGAGTATGG+TGG 0.639976 4.3:+37376591 MS.gene54574:CDS
ATAGAGGGGAAGTTGAGTGG+AGG 0.640276 4.3:+37376352 MS.gene54574:intron
TCTAGCCCAACATGTTTGGG+TGG 0.652575 4.3:+37376850 MS.gene54574:CDS
GCCCCAAAGATGAAGCCATG+TGG 0.662377 4.3:-37372789 None:intergenic
ATTAACCATTTACCTCCACA+AGG 0.685327 4.3:+37377784 MS.gene54574:CDS
CCACCATTACTAAACAACCA+TGG 0.686919 4.3:-37376793 None:intergenic
GGTATGCTATTGTTTCCAAG+TGG 0.687798 4.3:-37377153 None:intergenic
GGAGAAATACAACAATCCTG+TGG 0.690499 4.3:+37378225 MS.gene54574:CDS
GTTGGGCTAGAACATCGACC+TGG 0.733866 4.3:-37376838 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTCCTATTTATTATTAT+AGG - chr4.3:37375098-37375117 None:intergenic 10.0%
!! AAGAATTAAAAAAGAATTAA+TGG + chr4.3:37375756-37375775 MS.gene54574:intron 10.0%
!! ACTTTATAATATATATTAGA+TGG - chr4.3:37378613-37378632 None:intergenic 10.0%
!! TAATAATTCCTATTTAATAT+AGG - chr4.3:37375018-37375037 None:intergenic 10.0%
!! TAATATATGAAAATTATACA+TGG - chr4.3:37375877-37375896 None:intergenic 10.0%
!! TATATTAAATTTATTACTAC+AGG + chr4.3:37376137-37376156 MS.gene54574:intron 10.0%
!! TTATATTATATATAATTTGG+AGG - chr4.3:37375564-37375583 None:intergenic 10.0%
!! TTTAAATGTAGAAAAAATAA+GGG + chr4.3:37374932-37374951 MS.gene54574:intron 10.0%
!! TTTATTAAAAAAGTTTAGTT+TGG - chr4.3:37374259-37374278 None:intergenic 10.0%
!!! AAACTAAACTTTTTTAATAA+AGG + chr4.3:37374258-37374277 MS.gene54574:intron 10.0%
!!! AATAAAAAATTTGTTGTTTT+CGG - chr4.3:37375125-37375144 None:intergenic 10.0%
!!! AATTAATTATTGATTTGTTT+TGG + chr4.3:37376030-37376049 MS.gene54574:intron 10.0%
!!! ATATCATTTTTTTTTTTTTG+AGG - chr4.3:37374187-37374206 None:intergenic 10.0%
!!! ATTTTTTTAATTTGTTTGAT+TGG + chr4.3:37377603-37377622 MS.gene54574:intron 10.0%
!!! TATCATTTTTTTTTTTTTGA+GGG - chr4.3:37374186-37374205 None:intergenic 10.0%
!!! TTTTAAATGTAGAAAAAATA+AGG + chr4.3:37374931-37374950 MS.gene54574:intron 10.0%
!! AATCAAAACAACAATATTAT+AGG - chr4.3:37375803-37375822 None:intergenic 15.0%
!! ACAAAATTTAACAAATAGTT+TGG - chr4.3:37376457-37376476 None:intergenic 15.0%
!! ATGTATAGATAACTATAATT+TGG + chr4.3:37376679-37376698 MS.gene54574:intron 15.0%
!! CAAAAGATAATCTATTTAAA+TGG - chr4.3:37374717-37374736 None:intergenic 15.0%
!! TAAAAAAACAAAAATTAGTG+AGG - chr4.3:37374676-37374695 None:intergenic 15.0%
!! TAAATGTTTACATTCAAATA+TGG - chr4.3:37373609-37373628 None:intergenic 15.0%
!! TACATTTAAATAGTTCATAT+AGG + chr4.3:37377522-37377541 MS.gene54574:intron 15.0%
!! TAGTTTCTCATATATTATAA+AGG - chr4.3:37373265-37373284 None:intergenic 15.0%
!! TATATTTAATGACAACTTAA+GGG + chr4.3:37375063-37375082 MS.gene54574:intron 15.0%
!! TCAAAATAATAAGATTGTAT+TGG + chr4.3:37375903-37375922 MS.gene54574:intron 15.0%
!! TTATATTGTAAAGTGATAAA+AGG - chr4.3:37375169-37375188 None:intergenic 15.0%
!! TTGTTCGTAATAAAAAATAA+TGG + chr4.3:37375450-37375469 MS.gene54574:intron 15.0%
!!! AAAATATATTTTATTGCAAG+TGG - chr4.3:37373666-37373685 None:intergenic 15.0%
!!! AAAATCCTACAATTTATTTT+AGG - chr4.3:37375646-37375665 None:intergenic 15.0%
!!! AAACATACATTTTGTATAAT+AGG - chr4.3:37378326-37378345 None:intergenic 15.0%
!!! AAATATATTTTATTGCAAGT+GGG - chr4.3:37373665-37373684 None:intergenic 15.0%
!!! AATTTAAAATCAAACAATGA+AGG - chr4.3:37374867-37374886 None:intergenic 15.0%
!!! ATTTAAAACTTGTTAATCAT+GGG + chr4.3:37373624-37373643 MS.gene54574:intron 15.0%
!!! GGTTTTTTTTTTTTTTTACA+GGG + chr4.3:37378688-37378707 MS.gene54574:intron 15.0%
!!! GTTTTAAAAAAAACAAAAGA+GGG - chr4.3:37375241-37375260 None:intergenic 15.0%
!!! GTTTTTAACATAATATTTTC+TGG + chr4.3:37376260-37376279 MS.gene54574:intron 15.0%
!!! TATGCTTACATTTTTTTTTA+AGG - chr4.3:37375695-37375714 None:intergenic 15.0%
!!! TGGTTTTTTTTTTTTTTTAC+AGG + chr4.3:37378687-37378706 MS.gene54574:intron 15.0%
!!! TGTTTTAAAAAAAACAAAAG+AGG - chr4.3:37375242-37375261 None:intergenic 15.0%
!!! TTATATTAGTTTCTTTAACT+TGG + chr4.3:37375194-37375213 MS.gene54574:intron 15.0%
!!! TTGATTTAAAAAAGCTTTTT+TGG + chr4.3:37373141-37373160 MS.gene54574:intron 15.0%
!!! TTTGTTTGTTTTTTTTTTAC+CGG + chr4.3:37373897-37373916 MS.gene54574:intron 15.0%
!!! TTTTACTTCATAAAAATAGA+GGG + chr4.3:37376337-37376356 MS.gene54574:intron 15.0%
!!! TTTTTACTTCATAAAAATAG+AGG + chr4.3:37376336-37376355 MS.gene54574:intron 15.0%
!! AAAAGTGATGATAAAATTGT+TGG - chr4.3:37376309-37376328 None:intergenic 20.0%
!! AAAGAAATTTACCTGATATT+TGG - chr4.3:37376953-37376972 None:intergenic 20.0%
!! AACAAATGACTAATCAAATT+TGG - chr4.3:37375601-37375620 None:intergenic 20.0%
!! AAGATAATCTATTTAAATGG+AGG - chr4.3:37374714-37374733 None:intergenic 20.0%
!! AATGGTACATTCAAAATTTA+CGG + chr4.3:37376430-37376449 MS.gene54574:intron 20.0%
!! AATTCCTATTTAATATAGGA+TGG - chr4.3:37375014-37375033 None:intergenic 20.0%
!! AGATAATCTATTTAAATGGA+GGG - chr4.3:37374713-37374732 None:intergenic 20.0%
!! ATATCTTAATCTTAAAAGAG+AGG - chr4.3:37373741-37373760 None:intergenic 20.0%
!! CAAATACACATAATATATGT+CGG + chr4.3:37376513-37376532 MS.gene54574:intron 20.0%
!! GTATATTTAATGACAACTTA+AGG + chr4.3:37375062-37375081 MS.gene54574:intron 20.0%
!! TAAATAGTTCATATAGGTTA+AGG + chr4.3:37377528-37377547 MS.gene54574:intron 20.0%
!! TAAATGTAGTGTATGAATTA+TGG - chr4.3:37377510-37377529 None:intergenic 20.0%
!! TAATTAATTACCATCCAAAT+TGG - chr4.3:37377212-37377231 None:intergenic 20.0%
!! TACTAGAAAAAGCAAAATTA+GGG + chr4.3:37374545-37374564 MS.gene54574:intron 20.0%
!! TATCATTAATCAATTTGAAG+TGG - chr4.3:37375377-37375396 None:intergenic 20.0%
!! TGATTATGTGTAACTATATA+AGG - chr4.3:37376892-37376911 None:intergenic 20.0%
!! TGATTTATGTATATCAAACT+TGG - chr4.3:37374332-37374351 None:intergenic 20.0%
!! TTAACACATGTAATATGAAT+TGG + chr4.3:37376007-37376026 MS.gene54574:intron 20.0%
!! TTTACTTCATAAAAATAGAG+GGG + chr4.3:37376338-37376357 MS.gene54574:intron 20.0%
!!! AATTCACTAGTTTAATTACA+AGG - chr4.3:37373206-37373225 None:intergenic 20.0%
!!! ACTTTTTTAATAAAGGCAAA+AGG + chr4.3:37374265-37374284 MS.gene54574:intron 20.0%
!!! ATCATTAATCAATTTGAAGT+GGG - chr4.3:37375376-37375395 None:intergenic 20.0%
!!! CATTTAAAACTTGTTAATCA+TGG + chr4.3:37373623-37373642 MS.gene54574:intron 20.0%
!!! TTAACATAATATTTTCTGGT+TGG + chr4.3:37376264-37376283 MS.gene54574:intron 20.0%
!!! TTTAAAAAAGCTTTTTTGGT+TGG + chr4.3:37373145-37373164 MS.gene54574:intron 20.0%
!!! TTTGATTAGTCATTTGTTAT+CGG + chr4.3:37375603-37375622 MS.gene54574:intron 20.0%
!!! TTTTTTTTCTCAATGACAAA+AGG + chr4.3:37374362-37374381 MS.gene54574:intron 20.0%
! AACAAAAAGAGAAACATTGA+AGG - chr4.3:37375435-37375454 None:intergenic 25.0%
! AATGTAGAAAAAATAAGGGA+TGG + chr4.3:37374936-37374955 MS.gene54574:intron 25.0%
! AATTCTTCTTTGAACAATGA+AGG + chr4.3:37372891-37372910 MS.gene54574:intron 25.0%
! ACATACAAAAAGTTAATGAG+AGG + chr4.3:37373226-37373245 MS.gene54574:intron 25.0%
! ACATGTTTAATCAAAACATC+TGG - chr4.3:37374787-37374806 None:intergenic 25.0%
! AGAAAGAAAGAAAAAAAACC+TGG - chr4.3:37373455-37373474 None:intergenic 25.0%
! AGAATATGTATGATATGTAC+AGG + chr4.3:37378416-37378435 MS.gene54574:intron 25.0%
! ATGTAAGCATACACTATTAA+TGG + chr4.3:37375704-37375723 MS.gene54574:intron 25.0%
! ATTTAGTAAACTTAGGCAAT+CGG - chr4.3:37377699-37377718 None:intergenic 25.0%
! CAAAATTGGTTAACATTATG+TGG - chr4.3:37373104-37373123 None:intergenic 25.0%
! CAAACATGTATATAGTTTGA+AGG + chr4.3:37373371-37373390 MS.gene54574:intron 25.0%
! CAACAAAATATGTACATACT+TGG - chr4.3:37372830-37372849 None:intergenic 25.0%
! CATATTCTTTCAAATTAGTC+AGG - chr4.3:37378404-37378423 None:intergenic 25.0%
! CTACTAGAAAAAGCAAAATT+AGG + chr4.3:37374544-37374563 MS.gene54574:intron 25.0%
! GAAAGATTATTACTTGATTG+CGG - chr4.3:37378540-37378559 None:intergenic 25.0%
! GAGTACCTAAAATAAATTGT+AGG + chr4.3:37375638-37375657 MS.gene54574:intron 25.0%
! GATTGCAATTTAGTAAACTT+AGG - chr4.3:37377706-37377725 None:intergenic 25.0%
! TAGGCAAATGATATTTGAAA+TGG - chr4.3:37376646-37376665 None:intergenic 25.0%
! TATATCAAACTTGTATAGCT+TGG - chr4.3:37374232-37374251 None:intergenic 25.0%
! TATGACTAATACTTCATGTA+AGG + chr4.3:37377837-37377856 MS.gene54574:intron 25.0%
! TATTGTAAAGTGATAAAAGG+TGG - chr4.3:37375166-37375185 None:intergenic 25.0%
! TCATTAAACTAGACATTAAC+TGG - chr4.3:37373539-37373558 None:intergenic 25.0%
! TGGTGCCTATAATAATAAAT+AGG + chr4.3:37375090-37375109 MS.gene54574:intron 25.0%
! TTAAAGGAACTAATTAACAC+AGG - chr4.3:37377887-37377906 None:intergenic 25.0%
! TTTGAATGGACAAAAAAACA+TGG - chr4.3:37377402-37377421 None:intergenic 25.0%
!! AACTTTGTTGATTACAATGA+TGG + chr4.3:37378797-37378816 MS.gene54574:CDS 25.0%
!! AATGGTTCATTTGATTTCAT+TGG + chr4.3:37377736-37377755 MS.gene54574:CDS 25.0%
!! AGTTATGAATTTTCATTTCG+TGG + chr4.3:37378667-37378686 MS.gene54574:intron 25.0%
!! ATATATGTCGGTGAAATTTT+AGG + chr4.3:37376525-37376544 MS.gene54574:intron 25.0%
!! CATAATGTTAACCAATTTTG+AGG + chr4.3:37373104-37373123 MS.gene54574:intron 25.0%
!! TCATTAATCAATTTGAAGTG+GGG - chr4.3:37375375-37375394 None:intergenic 25.0%
!! TTACATGAAGTATTAGTCAT+AGG - chr4.3:37377838-37377857 None:intergenic 25.0%
!! TTTAAAGAATTTTGCTCTAC+CGG - chr4.3:37374131-37374150 None:intergenic 25.0%
!! TTTTAATAGCCATAGTATGT+AGG + chr4.3:37373870-37373889 MS.gene54574:intron 25.0%
!!! AATTTTGCTTTTTCTAGTAG+TGG - chr4.3:37374544-37374563 None:intergenic 25.0%
!!! AGATCTTTTGTTATACACTA+AGG + chr4.3:37378204-37378223 MS.gene54574:CDS 25.0%
!!! ATTACAATGATGGATTGAAA+AGG + chr4.3:37378807-37378826 MS.gene54574:CDS 25.0%
!!! ATTCGTAACTCTTTTTCATT+GGG + chr4.3:37376557-37376576 MS.gene54574:CDS 25.0%
!!! ATTGGTTTATTTCAGGTTTA+TGG + chr4.3:37377621-37377640 MS.gene54574:intron 25.0%
!!! ATTTCATTCCATTTTTTCTG+AGG + chr4.3:37376057-37376076 MS.gene54574:intron 25.0%
!!! ATTTTGCTTTTTCTAGTAGT+GGG - chr4.3:37374543-37374562 None:intergenic 25.0%
!!! GATCAAATTTTGACTTACTT+GGG - chr4.3:37376233-37376252 None:intergenic 25.0%
!!! GTTTTTTTGTCCATTCAAAA+TGG + chr4.3:37377403-37377422 MS.gene54574:intron 25.0%
!!! TCGTCTTTTAAGAAAATATC+CGG + chr4.3:37374109-37374128 MS.gene54574:intron 25.0%
!!! TGATCAAATTTTGACTTACT+TGG - chr4.3:37376234-37376253 None:intergenic 25.0%
!!! TTGTTTGATTGGTTTATTTC+AGG + chr4.3:37377614-37377633 MS.gene54574:intron 25.0%
!!! TTGTTTTTTGTTGAAGAATC+CGG + chr4.3:37373943-37373962 MS.gene54574:intron 25.0%
!!! TTTCATTCCATTTTTTCTGA+GGG + chr4.3:37376058-37376077 MS.gene54574:intron 25.0%
!!! TTTTTTTTTTTTTACAGGGC+CGG + chr4.3:37378692-37378711 MS.gene54574:intron 25.0%
AAAAAAAACCTACCTACTAC+CGG - chr4.3:37373919-37373938 None:intergenic 30.0%
AAAAAAAACCTGGATGTTGA+TGG - chr4.3:37373445-37373464 None:intergenic 30.0%
AAAAAAACCTGGATGTTGAT+GGG - chr4.3:37373444-37373463 None:intergenic 30.0%
AAAATTAATAAGCACCACCA+TGG + chr4.3:37374398-37374417 MS.gene54574:intron 30.0%
AAAGTTACATGTATATGTGC+AGG + chr4.3:37377080-37377099 MS.gene54574:intron 30.0%
AATCTTAAAAGAGAGGAGTT+AGG - chr4.3:37373734-37373753 None:intergenic 30.0%
ACAAACAAACCTACATACTA+TGG - chr4.3:37373882-37373901 None:intergenic 30.0%
ACAATTGCAGTTGAACAAAA+TGG + chr4.3:37377959-37377978 MS.gene54574:intron 30.0%
AGATCACTTGATTTCCAATT+TGG + chr4.3:37377195-37377214 MS.gene54574:CDS 30.0%
AGCTCCATCCTATATTAAAT+AGG + chr4.3:37375007-37375026 MS.gene54574:intron 30.0%
ATACAGAGAAAACAAAGGAA+AGG + chr4.3:37373500-37373519 MS.gene54574:intron 30.0%
ATAGGATCTGTTAAGTAACT+TGG - chr4.3:37377820-37377839 None:intergenic 30.0%
ATATATAGGCTGCTTCAATT+TGG + chr4.3:37378155-37378174 MS.gene54574:intron 30.0%
ATTATCCTTAGTCGTGAAAT+AGG + chr4.3:37375034-37375053 MS.gene54574:intron 30.0%
CAATGAAAAAGAGTTACGAA+TGG - chr4.3:37376558-37376577 None:intergenic 30.0%
CATAAAATATGCTAAGTGTG+AGG + chr4.3:37374421-37374440 MS.gene54574:intron 30.0%
CTAACATACAGAGAAAACAA+AGG + chr4.3:37373495-37373514 MS.gene54574:intron 30.0%
GAAATCTCTCACAAATTCTT+TGG + chr4.3:37374592-37374611 MS.gene54574:intron 30.0%
GAAGAATTACTCTATACAGT+TGG - chr4.3:37372879-37372898 None:intergenic 30.0%
GATTATGAAGGATCAGAATA+TGG + chr4.3:37376170-37376189 MS.gene54574:CDS 30.0%
TAGAAAAAGCAAAATTAGGG+AGG + chr4.3:37374548-37374567 MS.gene54574:intron 30.0%
TATTACTACAGGAAGATGTT+GGG + chr4.3:37376148-37376167 MS.gene54574:intron 30.0%
TCCATTCAAAATGGTGTATT+TGG + chr4.3:37377412-37377431 MS.gene54574:intron 30.0%
TGAAATTCCCTCAGAAAAAA+TGG - chr4.3:37376068-37376087 None:intergenic 30.0%
TGTGTATAAGACCAAATATC+AGG + chr4.3:37376939-37376958 MS.gene54574:CDS 30.0%
TTAATCAAAACATCTGGCAT+AGG - chr4.3:37374781-37374800 None:intergenic 30.0%
TTATTACTACAGGAAGATGT+TGG + chr4.3:37376147-37376166 MS.gene54574:intron 30.0%
! ACTTAGCATATTTTATGCCA+TGG - chr4.3:37374418-37374437 None:intergenic 30.0%
! CAAAAAAACATGGTTTTCTC+TGG - chr4.3:37377392-37377411 None:intergenic 30.0%
! CATTAATCAATTTGAAGTGG+GGG - chr4.3:37375374-37375393 None:intergenic 30.0%
! TCCAAATACACCATTTTGAA+TGG - chr4.3:37377416-37377435 None:intergenic 30.0%
!! ATTTTTCGCATGGTCATTTT+TGG + chr4.3:37378730-37378749 MS.gene54574:CDS 30.0%
!! CATTCGTAACTCTTTTTCAT+TGG + chr4.3:37376556-37376575 MS.gene54574:CDS 30.0%
!! CATTTTTGGACTGTAATGAA+TGG + chr4.3:37378744-37378763 MS.gene54574:CDS 30.0%
!! GTCATTCAACTCTTTAAAGT+CGG - chr4.3:37375352-37375371 None:intergenic 30.0%
!! TATTTTATTGCAAGTGGGTT+AGG - chr4.3:37373660-37373679 None:intergenic 30.0%
!! TCCAACAATTTCTAAAACTC+CGG - chr4.3:37377444-37377463 None:intergenic 30.0%
!! TTGTTGATTTGCCTCAAAAT+TGG - chr4.3:37373118-37373137 None:intergenic 30.0%
!! TTTCTTTAACTTGGTTCCTA+GGG + chr4.3:37375203-37375222 MS.gene54574:intron 30.0%
!!! CATTTACGAACTTTTCAAGT+AGG - chr4.3:37373792-37373811 None:intergenic 30.0%
!!! GTTTTTTTTTTACCGGTAGT+AGG + chr4.3:37373904-37373923 MS.gene54574:intron 30.0%
AAAAAACCGTCACACGATTT+GGG - chr4.3:37373011-37373030 None:intergenic 35.0%
AATGACAACTTAAGGGAAGT+TGG + chr4.3:37375070-37375089 MS.gene54574:intron 35.0%
AATTACCACCCAAACATGTT+GGG - chr4.3:37376858-37376877 None:intergenic 35.0%
ATACATTGAATCGCTATGCT+AGG - chr4.3:37376665-37376684 None:intergenic 35.0%
ATATGTGCAGGCATATCAAA+AGG + chr4.3:37377092-37377111 MS.gene54574:intron 35.0%
ATGGTGTATTTGGATGAAAC+CGG + chr4.3:37377422-37377441 MS.gene54574:intron 35.0%
ATTAACCATTTACCTCCACA+AGG + chr4.3:37377784-37377803 MS.gene54574:CDS 35.0%
CACTTGATTTCCAATTTGGA+TGG + chr4.3:37377199-37377218 MS.gene54574:CDS 35.0%
CTATTTAAATGGAGGGTCTA+TGG - chr4.3:37374706-37374725 None:intergenic 35.0%
GAACAAAATGGAAAACCTCT+AGG + chr4.3:37377971-37377990 MS.gene54574:CDS 35.0%
GACTTTCTTGTACTAGATAC+TGG - chr4.3:37377266-37377285 None:intergenic 35.0%
GATCTTTGCTTCAAGGAATT+CGG + chr4.3:37376736-37376755 MS.gene54574:CDS 35.0%
GGTGTAGCTTTCAAATAAGA+TGG - chr4.3:37377296-37377315 None:intergenic 35.0%
GTGGTCTACATTACTGAAAA+TGG + chr4.3:37378244-37378263 MS.gene54574:CDS 35.0%
GTTGGAGGATAAAAACACTT+TGG + chr4.3:37377458-37377477 MS.gene54574:intron 35.0%
TAGGATTGTTCCAGTTATGA+TGG - chr4.3:37378307-37378326 None:intergenic 35.0%
TAGGTTGTTCGTTTGGAAAT+TGG - chr4.3:37374762-37374781 None:intergenic 35.0%
TAGTGAGGAAAGTTTAGTGA+GGG - chr4.3:37374661-37374680 None:intergenic 35.0%
TATGTGCAGGCATATCAAAA+GGG + chr4.3:37377093-37377112 MS.gene54574:intron 35.0%
TGAAACTTCAACTCCATTTG+CGG - chr4.3:37372730-37372749 None:intergenic 35.0%
TGGATATACGTTTATCCAAG+AGG + chr4.3:37378175-37378194 MS.gene54574:CDS 35.0%
TTAAAGTTAAGCACTCCACA+CGG + chr4.3:37374295-37374314 MS.gene54574:intron 35.0%
TTAGGGAGGAAAATTAGTGA+CGG + chr4.3:37374562-37374581 MS.gene54574:intron 35.0%
TTAGTGAGGAAAGTTTAGTG+AGG - chr4.3:37374662-37374681 None:intergenic 35.0%
TTCTTGAATGCCATCATAAC+TGG + chr4.3:37378294-37378313 MS.gene54574:intron 35.0%
TTGCAATCAAAGCTAGTGAA+TGG + chr4.3:37377718-37377737 MS.gene54574:CDS 35.0%
TTTATGGAACCACTAACAAC+CGG + chr4.3:37377637-37377656 MS.gene54574:CDS 35.0%
TTTCTCCTATTTCACGACTA+AGG - chr4.3:37375042-37375061 None:intergenic 35.0%
! ATAGTTTGAAGGTGCAGTAA+AGG + chr4.3:37373382-37373401 MS.gene54574:intron 35.0%
! ATCAACGAATTGTTGGCTAA+TGG + chr4.3:37376412-37376431 MS.gene54574:CDS 35.0%
! ATGTAAAGGGATTTTTCGCA+TGG + chr4.3:37378720-37378739 MS.gene54574:CDS 35.0%
! GCATAACATTGGTAACAAAC+TGG + chr4.3:37377124-37377143 MS.gene54574:CDS 35.0%
! TAGCATATTTTATGCCATGG+TGG - chr4.3:37374415-37374434 None:intergenic 35.0%
! TTCTGTAGAAGAAGCTCTTT+TGG + chr4.3:37378466-37378485 MS.gene54574:CDS 35.0%
! TTGGTCGCAAAATTTTGTGA+CGG + chr4.3:37374611-37374630 MS.gene54574:intron 35.0%
! TTTTCAGTAATGTAGACCAC+AGG - chr4.3:37378244-37378263 None:intergenic 35.0%
!! AGTAATGGTGGATATGCAAT+GGG + chr4.3:37376805-37376824 MS.gene54574:CDS 35.0%
!! ATACTCGTCTTCTAAGACTT+GGG - chr4.3:37376589-37376608 None:intergenic 35.0%
!! ATTTTGTGACGGAATTTGAG+AGG + chr4.3:37374622-37374641 MS.gene54574:intron 35.0%
!! GTTTCTTTAACTTGGTTCCT+AGG + chr4.3:37375202-37375221 MS.gene54574:intron 35.0%
!! TAGTAATGGTGGATATGCAA+TGG + chr4.3:37376804-37376823 MS.gene54574:CDS 35.0%
!! TTTTGTGACGGAATTTGAGA+GGG + chr4.3:37374623-37374642 MS.gene54574:intron 35.0%
!!! ACCGGAGTTTTAGAAATTGT+TGG + chr4.3:37377440-37377459 MS.gene54574:intron 35.0%
!!! ACGATTTTTGAGATAGAACG+TGG - chr4.3:37373049-37373068 None:intergenic 35.0%
!!! CATGCTTTTAGGATAATCTC+CGG - chr4.3:37377659-37377678 None:intergenic 35.0%
!!! CGATTTTTGAGATAGAACGT+GGG - chr4.3:37373048-37373067 None:intergenic 35.0%
!!! GGAGTTTTAGAAATTGTTGG+AGG + chr4.3:37377443-37377462 MS.gene54574:intron 35.0%
!!! TTTTTTTACCGGTAGTAGGT+AGG + chr4.3:37373908-37373927 MS.gene54574:intron 35.0%
AAAAGATCTCGAAGTCCTCT+TGG - chr4.3:37378193-37378212 None:intergenic 40.0%
AAAATAGAGGGGAAGTTGAG+TGG + chr4.3:37376349-37376368 MS.gene54574:intron 40.0%
AAATCCCTTTACATTCGAGC+CGG - chr4.3:37378714-37378733 None:intergenic 40.0%
ACATGTTTGGGTGGTAATTC+TGG + chr4.3:37376859-37376878 MS.gene54574:CDS 40.0%
ACCATTGAGCAGAAAGCTTT+GGG - chr4.3:37378835-37378854 None:intergenic 40.0%
AGTTACTAGAGACTTACCCT+TGG - chr4.3:37377998-37378017 None:intergenic 40.0%
ATGTTCTAGCCCAACATGTT+TGG + chr4.3:37376846-37376865 MS.gene54574:CDS 40.0%
CAACCTCATCAACGAATTGT+TGG + chr4.3:37376405-37376424 MS.gene54574:CDS 40.0%
CAAGTCTTAGAAGACGAGTA+TGG + chr4.3:37376588-37376607 MS.gene54574:CDS 40.0%
CAATAGCATACCCGATCAAA+AGG + chr4.3:37377164-37377183 MS.gene54574:CDS 40.0%
CCAAGCGATTGAGAATCTAT+AGG - chr4.3:37376199-37376218 None:intergenic 40.0%
CCACCATTACTAAACAACCA+TGG - chr4.3:37376796-37376815 None:intergenic 40.0%
CCATGGTTGTTTAGTAATGG+TGG + chr4.3:37376793-37376812 MS.gene54574:CDS 40.0%
CCTATAGATTCTCAATCGCT+TGG + chr4.3:37376196-37376215 MS.gene54574:CDS 40.0%
CTATGCTGATCTTTGCTTCA+AGG + chr4.3:37376729-37376748 MS.gene54574:CDS 40.0%
GAAAAAACCGTCACACGATT+TGG - chr4.3:37373012-37373031 None:intergenic 40.0%
GAATTACCACCCAAACATGT+TGG - chr4.3:37376859-37376878 None:intergenic 40.0%
GAGCCATGGTTGTTTAGTAA+TGG + chr4.3:37376790-37376809 MS.gene54574:CDS 40.0%
GCATATCAAAAGGGCAAGAT+AGG + chr4.3:37377102-37377121 MS.gene54574:CDS 40.0%
GGAAGATGTTGGGATTATGA+AGG + chr4.3:37376158-37376177 MS.gene54574:intron 40.0%
GGAGAAATACAACAATCCTG+TGG + chr4.3:37378225-37378244 MS.gene54574:CDS 40.0%
GGATCTGTTAAGTAACTTGG+AGG - chr4.3:37377817-37377836 None:intergenic 40.0%
GGTATGCTATTGTTTCCAAG+TGG - chr4.3:37377156-37377175 None:intergenic 40.0%
GGTGTATCCGAAATTGTTGT+GGG - chr4.3:37377319-37377338 None:intergenic 40.0%
GTACCTTATAGCGATGGTAT+TGG - chr4.3:37374986-37375005 None:intergenic 40.0%
GTCGGATGTGAAGAAAATGA+TGG - chr4.3:37377360-37377379 None:intergenic 40.0%
GTGTATCCGAAATTGTTGTG+GGG - chr4.3:37377318-37377337 None:intergenic 40.0%
GTTTCAACTCCTCTTGACAT+CGG + chr4.3:37372744-37372763 MS.gene54574:CDS 40.0%
TACCATTGAGCAGAAAGCTT+TGG - chr4.3:37378836-37378855 None:intergenic 40.0%
TAGCCAACAATTCGTTGATG+AGG - chr4.3:37376411-37376430 None:intergenic 40.0%
TATACCAACCTACCTACTAC+CGG - chr4.3:37373965-37373984 None:intergenic 40.0%
TCTATACAGTTGGCGTGAAT+AGG - chr4.3:37372869-37372888 None:intergenic 40.0%
TGACCAATACCATCGCTATA+AGG + chr4.3:37374980-37374999 MS.gene54574:CDS 40.0%
TGTATCCGAAATTGTTGTGG+GGG - chr4.3:37377317-37377336 None:intergenic 40.0%
TGTTCTAGCCCAACATGTTT+GGG + chr4.3:37376847-37376866 MS.gene54574:CDS 40.0%
TTCCACATGGCTTCATCTTT+GGG + chr4.3:37372787-37372806 MS.gene54574:CDS 40.0%
TTGTTATCGGATCACTCTCT+AGG + chr4.3:37375616-37375635 MS.gene54574:intron 40.0%
TTGTTGAAGAATCCGGTAGT+AGG + chr4.3:37373950-37373969 MS.gene54574:intron 40.0%
TTTCCACATGGCTTCATCTT+TGG + chr4.3:37372786-37372805 MS.gene54574:CDS 40.0%
TTTCTCTGGATCCTTTGTGT+CGG - chr4.3:37377378-37377397 None:intergenic 40.0%
TTTCTTCACATCCGACACAA+AGG + chr4.3:37377364-37377383 MS.gene54574:intron 40.0%
! ACAAACTGGTTCATACCACT+TGG + chr4.3:37377138-37377157 MS.gene54574:CDS 40.0%
! ACTATGGCTCTCATGCTTTT+AGG - chr4.3:37377670-37377689 None:intergenic 40.0%
! AGTGGAGGCATAAATCATGA+AGG + chr4.3:37376367-37376386 MS.gene54574:CDS 40.0%
! CAATTTCGGATACACCGTTT+TGG + chr4.3:37377323-37377342 MS.gene54574:intron 40.0%
! GACTGTAATGAATGGTTTGC+AGG + chr4.3:37378752-37378771 MS.gene54574:CDS 40.0%
! TCTCTTAGCAGCCTTTTGAT+CGG - chr4.3:37377178-37377197 None:intergenic 40.0%
! TTGGCATATTTTATGCCGTG+TGG - chr4.3:37374313-37374332 None:intergenic 40.0%
! TTTGAAGGTGCAGTAAAGGA+AGG + chr4.3:37373386-37373405 MS.gene54574:CDS 40.0%
!! AGGCAATCGGTTTTTCACTA+TGG - chr4.3:37377686-37377705 None:intergenic 40.0%
!! CATACTCGTCTTCTAAGACT+TGG - chr4.3:37376590-37376609 None:intergenic 40.0%
!! GACTTACTTGGGAGTATTCT+TGG - chr4.3:37376222-37376241 None:intergenic 40.0%
!! TACTCGTCTTCTAAGACTTG+GGG - chr4.3:37376588-37376607 None:intergenic 40.0%
!!! GTGACCTGATTTTAGAATCG+TGG - chr4.3:37373073-37373092 None:intergenic 40.0%
ACCCAAAGCTTTCTGCTCAA+TGG + chr4.3:37378831-37378850 MS.gene54574:CDS 45.0%
ATAGAACGTGGGTGAACTAC+TGG - chr4.3:37373037-37373056 None:intergenic 45.0%
ATGGAAAACCTCTAGGTCCA+AGG + chr4.3:37377978-37377997 MS.gene54574:CDS 45.0%
CATATAGGTTAAGGTGCGCA+AGG + chr4.3:37377537-37377556 MS.gene54574:intron 45.0%
CATTGCCTTGTGGAGGTAAA+TGG - chr4.3:37377792-37377811 None:intergenic 45.0%
CGGTGTATCCGAAATTGTTG+TGG - chr4.3:37377320-37377339 None:intergenic 45.0%
CTACACCCCCACAACAATTT+CGG + chr4.3:37377309-37377328 MS.gene54574:intron 45.0%
GAGAGGAGTTAGGTCTCAAA+AGG - chr4.3:37373724-37373743 None:intergenic 45.0%
GAGCTAGTACCTTATAGCGA+TGG - chr4.3:37374992-37375011 None:intergenic 45.0%
GGATAATCTCCGGTTGTTAG+TGG - chr4.3:37377649-37377668 None:intergenic 45.0%
GGGCAAGATAGGCATAACAT+TGG + chr4.3:37377113-37377132 MS.gene54574:CDS 45.0%
GGGTTACATTTAACGAGCCA+TGG + chr4.3:37376776-37376795 MS.gene54574:CDS 45.0%
GTCACACTTACTTCCGCAAA+TGG + chr4.3:37372714-37372733 MS.gene54574:CDS 45.0%
GTCTTAGAAGACGAGTATGG+TGG + chr4.3:37376591-37376610 MS.gene54574:CDS 45.0%
TCCACATGGCTTCATCTTTG+GGG + chr4.3:37372788-37372807 MS.gene54574:CDS 45.0%
TCGGAGATAGAGTGAAGTAC+TGG + chr4.3:37376755-37376774 MS.gene54574:CDS 45.0%
TCTGGCATAGGTTGTTCGTT+TGG - chr4.3:37374769-37374788 None:intergenic 45.0%
TGAAGAATCCGGTAGTAGGT+AGG + chr4.3:37373954-37373973 MS.gene54574:intron 45.0%
TGGAAAACCTCTAGGTCCAA+GGG + chr4.3:37377979-37377998 MS.gene54574:CDS 45.0%
TGGTAGAGGACCAAGTATCT+GGG + chr4.3:37373409-37373428 MS.gene54574:CDS 45.0%
TTGACATCGGTAACCTGAGT+CGG + chr4.3:37372757-37372776 MS.gene54574:CDS 45.0%
! AGTCGGAGTAGTTTTCCACA+TGG + chr4.3:37372774-37372793 MS.gene54574:CDS 45.0%
! CGGAGATAGAGTGAAGTACT+GGG + chr4.3:37376756-37376775 MS.gene54574:CDS 45.0%
! CTCTTAGCAGCCTTTTGATC+GGG - chr4.3:37377177-37377196 None:intergenic 45.0%
! GCAGGCTTTACTGTTCGTTT+TGG + chr4.3:37378770-37378789 MS.gene54574:CDS 45.0%
!! CGTGCCACGATTCTAAAATC+AGG + chr4.3:37373066-37373085 MS.gene54574:intron 45.0%
!! TTCGGATACACCGTTTTGGA+CGG + chr4.3:37377327-37377346 MS.gene54574:intron 45.0%
!!! TGGTTTTAGCCCGTCCAAAA+CGG - chr4.3:37377340-37377359 None:intergenic 45.0%
!! ACTTTATATTATATATAATT+TGG - chr4.3:37375567-37375586 None:intergenic 5.0%
!! TTAATTTATCATAATATTAA+AGG - chr4.3:37377903-37377922 None:intergenic 5.0%
!! TTTATAATAATTGTATATAT+AGG + chr4.3:37378141-37378160 MS.gene54574:intron 5.0%
!!! AAAATTCTTTAAAAATAAAT+TGG + chr4.3:37374138-37374157 MS.gene54574:intron 5.0%
ACCTTCACCCATCAACATCC+AGG + chr4.3:37373434-37373453 MS.gene54574:CDS 50.0%
AGACTTACCCTTGGACCTAG+AGG - chr4.3:37377989-37378008 None:intergenic 50.0%
ATAGAGGGGAAGTTGAGTGG+AGG + chr4.3:37376352-37376371 MS.gene54574:intron 50.0%
CCGTATCCCAAATCGTGTGA+CGG + chr4.3:37373002-37373021 MS.gene54574:intron 50.0%
CTCAGGTTACCGATGTCAAG+AGG - chr4.3:37372756-37372775 None:intergenic 50.0%
GAATCCGGTAGTAGGTAGGT+TGG + chr4.3:37373958-37373977 MS.gene54574:intron 50.0%
GCAGTAAAGGAAGGTGGTAG+AGG + chr4.3:37373395-37373414 MS.gene54574:CDS 50.0%
GTGGAAAACTACTCCGACTC+AGG - chr4.3:37372773-37372792 None:intergenic 50.0%
GTGGTAGAGGACCAAGTATC+TGG + chr4.3:37373408-37373427 MS.gene54574:CDS 50.0%
TCTAGCCCAACATGTTTGGG+TGG + chr4.3:37376850-37376869 MS.gene54574:CDS 50.0%
! ACCTGGATGTTGATGGGTGA+AGG - chr4.3:37373438-37373457 None:intergenic 50.0%
! CCGTCACACGATTTGGGATA+CGG - chr4.3:37373005-37373024 None:intergenic 50.0%
! GAAGGTGCAGTAAAGGAAGG+TGG + chr4.3:37373389-37373408 MS.gene54574:CDS 50.0%
!! GTGAAGGTGTCCCAGATACT+TGG - chr4.3:37373422-37373441 None:intergenic 50.0%
!! TCGGATACACCGTTTTGGAC+GGG + chr4.3:37377328-37377347 MS.gene54574:intron 50.0%
GCAATGGGAACAACAGCACC+AGG + chr4.3:37376820-37376839 MS.gene54574:CDS 55.0%
GCCCCAAAGATGAAGCCATG+TGG - chr4.3:37372792-37372811 None:intergenic 55.0%
! GTTGGGCTAGAACATCGACC+TGG - chr4.3:37376841-37376860 None:intergenic 55.0%
!! AGGGCCGGCTCGAATGTAAA+GGG + chr4.3:37378707-37378726 MS.gene54574:intron 55.0%
!! AGGGTGCTAAAGAGTGCCCT+AGG - chr4.3:37375222-37375241 None:intergenic 55.0%
!! CATGGCTTCATCTTTGGGGC+AGG + chr4.3:37372792-37372811 MS.gene54574:CDS 55.0%
!! CTTGGAGGAGCATTGCCTTG+TGG - chr4.3:37377802-37377821 None:intergenic 55.0%
!! CAGGGCCGGCTCGAATGTAA+AGG + chr4.3:37378706-37378725 MS.gene54574:intron 60.0%
!! GGAGGAGCATTGCCTTGTGG+AGG - chr4.3:37377799-37377818 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 37372687 37378880 37372687 ID=MS.gene54574
chr4.3 mRNA 37372687 37378880 37372687 ID=MS.gene54574.t1;Parent=MS.gene54574
chr4.3 exon 37372687 37372830 37372687 ID=MS.gene54574.t1.exon1;Parent=MS.gene54574.t1
chr4.3 CDS 37372687 37372830 37372687 ID=cds.MS.gene54574.t1;Parent=MS.gene54574.t1
chr4.3 exon 37373386 37373455 37373386 ID=MS.gene54574.t1.exon2;Parent=MS.gene54574.t1
chr4.3 CDS 37373386 37373455 37373386 ID=cds.MS.gene54574.t1;Parent=MS.gene54574.t1
chr4.3 exon 37374943 37375001 37374943 ID=MS.gene54574.t1.exon3;Parent=MS.gene54574.t1
chr4.3 CDS 37374943 37375001 37374943 ID=cds.MS.gene54574.t1;Parent=MS.gene54574.t1
chr4.3 exon 37376159 37376234 37376159 ID=MS.gene54574.t1.exon4;Parent=MS.gene54574.t1
chr4.3 CDS 37376159 37376234 37376159 ID=cds.MS.gene54574.t1;Parent=MS.gene54574.t1
chr4.3 exon 37376356 37376433 37376356 ID=MS.gene54574.t1.exon5;Parent=MS.gene54574.t1
chr4.3 CDS 37376356 37376433 37376356 ID=cds.MS.gene54574.t1;Parent=MS.gene54574.t1
chr4.3 exon 37376547 37376634 37376547 ID=MS.gene54574.t1.exon6;Parent=MS.gene54574.t1
chr4.3 CDS 37376547 37376634 37376547 ID=cds.MS.gene54574.t1;Parent=MS.gene54574.t1
chr4.3 exon 37376714 37376960 37376714 ID=MS.gene54574.t1.exon7;Parent=MS.gene54574.t1
chr4.3 CDS 37376714 37376960 37376714 ID=cds.MS.gene54574.t1;Parent=MS.gene54574.t1
chr4.3 exon 37377102 37377220 37377102 ID=MS.gene54574.t1.exon8;Parent=MS.gene54574.t1
chr4.3 CDS 37377102 37377220 37377102 ID=cds.MS.gene54574.t1;Parent=MS.gene54574.t1
chr4.3 exon 37377636 37377853 37377636 ID=MS.gene54574.t1.exon9;Parent=MS.gene54574.t1
chr4.3 CDS 37377636 37377853 37377636 ID=cds.MS.gene54574.t1;Parent=MS.gene54574.t1
chr4.3 exon 37377969 37378000 37377969 ID=MS.gene54574.t1.exon10;Parent=MS.gene54574.t1
chr4.3 CDS 37377969 37378000 37377969 ID=cds.MS.gene54574.t1;Parent=MS.gene54574.t1
chr4.3 exon 37378163 37378265 37378163 ID=MS.gene54574.t1.exon11;Parent=MS.gene54574.t1
chr4.3 CDS 37378163 37378265 37378163 ID=cds.MS.gene54574.t1;Parent=MS.gene54574.t1
chr4.3 exon 37378438 37378546 37378438 ID=MS.gene54574.t1.exon12;Parent=MS.gene54574.t1
chr4.3 CDS 37378438 37378546 37378438 ID=cds.MS.gene54574.t1;Parent=MS.gene54574.t1
chr4.3 exon 37378709 37378880 37378709 ID=MS.gene54574.t1.exon13;Parent=MS.gene54574.t1
chr4.3 CDS 37378709 37378880 37378709 ID=cds.MS.gene54574.t1;Parent=MS.gene54574.t1
Gene Sequence

>MS.gene54574

ATGCTTGCTCTCTTTGTTGTTAGCTCAGTCACACTTACTTCCGCAAATGGAGTTGAAGTTTCAACTCCTCTTGACATCGGTAACCTGAGTCGGAGTAGTTTTCCACATGGCTTCATCTTTGGGGCAGGATCGTCATCTTACCAAGTATGTACATATTTTGTTGATGTAAACTAAGATATCCTATTCACGCCAACTGTATAGAGTAATTCTTCTTTGAACAATGAAGGCTTAATAGTGCTTAAACTAGTGAAAAATCGTGTCATGATTTTTCGAAATCGTGCTACGTTGAAGTTATTACACGATACATAACTACATCCGTATCCCAAATCGTGTGACGGTTTTTTCTTCCAGTAGTTCACCCACGTTCTATCTCAAAAATCGTGCCACGATTCTAAAATCAGGTCACGATTGTCTCCACATAATGTTAACCAATTTTGAGGCAAATCAACAACTTTTGATTTAAAAAAGCTTTTTTGGTTGGAATAAGTGTATGTTTTTACTTCTAATTAAGAAAATCCTTGTAATTAAACTAGTGAATTACATACAAAAAGTTAATGAGAGGAGTTCATACAAAACCTTTATAATATATGAGAAACTATATTTAAAAGAATTACACAGCTATTTGTTTTTCATGTTTACTTGACTTGATCTTCTTAATAATTAACTTTTTGTGTTTGTGAAATGCAAACATGTATATAGTTTGAAGGTGCAGTAAAGGAAGGTGGTAGAGGACCAAGTATCTGGGACACCTTCACCCATCAACATCCAGGTTTTTTTTCTTTCTTTCTTTCTATCTCAGTTTAACACTCTAACATACAGAGAAAACAAAGGAAAGGAGATATTGCTTTGCCAGTTAATGTCTAGTTTAATGAATACATTTTAAATCAATTTATCACTTTTAAAATTACTTGAATCTTATCCATATTTGAATGTAAACATTTAAAACTTGTTAATCATGGGAAGATACATGCCTAACCCACTTGCAATAAAATATATTTTAATTTGCAAAGAAATAAAATAAAATGTACTTTTAACCTTTTGAGACCTAACTCCTCTCTTTTAAGATTAAGATATTATGCAAATTGTGATTTTCAATTACAAGCCTACTTGAAAAGTTCGTAAATGAAAAAGAACACAACTTTTGTAAATTTATAATCTGATCTAATTATTAGTATGTAGTTTTTTTTAATAGCCATAGTATGTAGGTTTGTTTGTTTGTTTTTTTTTTACCGGTAGTAGGTAGGTTTTTTTTTTTTTTGTTTTTTGTTGAAGAATCCGGTAGTAGGTAGGTTGGTATATATATCTTTTACATTGTCAATTAATTATAAATTAGTTGAAAATTTTAAATAATATTTTTAGTTGAAAATTTTAAATAATATTTTAAATAATCGATAATTGATTAACATTGTAAAAACTTTATGATCGTCTTTTAAGAAAATATCCGGTAGAGCAAAATTCTTTAAAAATAAATTGGCTAAACATGATATCAATATGTGCCCTCAAAAAAAAAAAAATGATATCAATATGTGATTATGATGACGTCCAAGCTATACAAGTTTGATATAAAATCCAAACTAAACTTTTTTAATAAAGGCAAAAGGTATAATATTAAAGTTAAGCACTCCACACGGCATAAAATATGCCAAGTTTGATATACATAAATCAAAATTGAACTTTTTTTTTCTCAATGACAAAAGGTATAATATAATTTAAAATTAATAAGCACCACCATGGCATAAAATATGCTAAGTGTGAGGATTGAGAAGTTTAAGTTATCATTACTCTTGTTTAAAAAACAAATTACTCACTATTCATTCACGTAACAATCTACACAATATAATTGTCATTCTTAACCCACTACTAGAAAAAGCAAAATTAGGGAGGAAAATTAGTGACGGAAAAAATGAAATCTCTCACAAATTCTTTGGTCGCAAAATTTTGTGACGGAATTTGAGAGGGATTTCACGTTTTCCCTCACTAAACTTTCCTCACTAATTTTTGTTTTTTTAGTAGTGACCATAGACCCTCCATTTAAATAGATTATCTTTTGTTAGAATATGATTGATTTTAGACCAATTTCCAAACGAACAACCTATGCCAGATGTTTTGATTAAACATGTAATGAAAATCTTCAATTAGATATTTGAAATTCAACAGAGCTTACAGTTATATTTTCTCCTTCATTGTTTGATTTTAAATTGTGTATATGCATAATTTACAATATTTATATGATGCATTATATGATTTTAAATGTAGAAAAAATAAGGGATGGAAGCAATGCAGACGTGACTGTTGACCAATACCATCGCTATAAGGTACTAGCTCCATCCTATATTAAATAGGAATTATTATCCTTAGTCGTGAAATAGGAGAAAGTATATTTAATGACAACTTAAGGGAAGTTGGTGCCTATAATAATAAATAGGAATTTTTCACCGAAAACAACAAATTTTTTATTTACAAAAAGTTGAATATACCACCTTTTATCACTTTACAATATAATATTTTTATATTAGTTTCTTTAACTTGGTTCCTAGGGCACTCTTTAGCACCCTCTTTTGTTTTTTTTAAAACAACTAAATTATTTATTAAGAGTCATATATTATATGAGATATAATCTAAAAACAAATTTTTATGTGCGAGACATCTTTCAATTTATAAGCCGACTTTAAAGAGTTGAATGACCCCCACTTCAAATTGATTAATGATATTCGTACAACTATTTTGCAACAATTTTTGAGATAACCTTCAATGTTTCTCTTTTTGTTCGTAATAAAAAATAATGGAGTGAGAAAAAAGAAGAGATGAAGTAAGAACATAATGTGAGTATAAAAGTGAAAGTTGTCACAAATTGATTGTATAAATATCATTTTTCCTCCAAATTATATATAATATAAAGTCAAAGTCTATTCCAAATTTGATTAGTCATTTGTTATCGGATCACTCTCTAGGAGTACCTAAAATAAATTGTAGGATTTTTCTCTAACATGTAAGCATACACTATTCCTTAAAAAAAAATGTAAGCATACACTATTAATGGAACATTTAATGCTTGAAAATAACTTAAAAAAGAATTAAAAAAGAATTAATGGAACATTTAATGCTTGAAAATACCTATAATATTGTTGTTTTGATTCATAAAAAAGAATTAAAAAAAACTTAAAAAATTCAAAATAGTAAGTTTGTACCATGTATAATTTTCATATATTAAGAAGTTCAAAATAATAAGATTGTATTGGACTTTTACATTTTATATTAAATGTATAAATTTATAATAAATAATTGTTGTTTTCAATAAAAAGTTGTTACATACAGTTGCTTTAACACATGTAATATGAATTGGAATTAATTATTGATTTGTTTTGGCACTATTTCATTCCATTTTTTCTGAGGGAATTTCATTTCATTTCTATTAATTAATTTCATTTTGTGTGTGTACAATATAACAAATATATTAAATTTATTACTACAGGAAGATGTTGGGATTATGAAGGATCAGAATATGGATTCCTATAGATTCTCAATCGCTTGGCCAAGAATACTCCCAAGTAAGTCAAAATTTGATCATAGACAGTTTTTAACATAATATTTTCTGGTTGGATGCTATATTTGTTTCACACCAACAATTTTATCATCACTTTTTGTTTTTTTTTTACTTCATAAAAATAGAGGGGAAGTTGAGTGGAGGCATAAATCATGAAGGAATCAAATATTACAACAACCTCATCAACGAATTGTTGGCTAATGGTACATTCAAAATTTACGGTCCAAACTATTTGTTAAATTTTGTATTTTAATAATAAAGTGTAGTTGTTAGTAAAACAATCAAATACACATAATATATGTCGGTGAAATTTTAGGTATACAACCATTCGTAACTCTTTTTCATTGGGATCTTCCCCAAGTCTTAGAAGACGAGTATGGTGGTTTCTTAAGCTCTCTCATAATGTGAGTCTCCATTTCAAATATCATTTGCCTAGCATAGCGATTCAATGTATAGATAACTATAATTTGGTTAATGTTTTAGAAATGATTTTCGAGACTATGCTGATCTTTGCTTCAAGGAATTCGGAGATAGAGTGAAGTACTGGGTTACATTTAACGAGCCATGGTTGTTTAGTAATGGTGGATATGCAATGGGAACAACAGCACCAGGTCGATGTTCTAGCCCAACATGTTTGGGTGGTAATTCTGGCACAGAACCTTATATAGTTACACATAATCAAATTCTTGCTCATGCACAAGCTGTACATGTGTATAAGACCAAATATCAGGTAAATTTCTTTATTTACAAAGCCCATTTTTTTTATTTATTTTATAAAATTAACTAAAGTTTATTAGAATGTTATATATTAACTATTATTATCAATTTTTTTAAATCTATTACTTATTTAAAGTTACATGTATATGTGCAGGCATATCAAAAGGGCAAGATAGGCATAACATTGGTAACAAACTGGTTCATACCACTTGGAAACAATAGCATACCCGATCAAAAGGCTGCTAAGAGATCACTTGATTTCCAATTTGGATGGTAATTAATTAAGTGCTCATTAAAATATTTACAAACACAAATCCAGTATCTAGTACAAGAAAGTCAATATATCCATCTTATTTGAAAGCTACACCCCCACAACAATTTCGGATACACCGTTTTGGACGGGCTAAAACCATCATTTTCTTCACATCCGACACAAAGGATCCAGAGAAAACCATGTTTTTTTGTCCATTCAAAATGGTGTATTTGGATGAAACCGGAGTTTTAGAAATTGTTGGAGGATAAAAACACTTTGGTTTTATTACGACTAAATGATATATATCCATAATTCATACACTACATTTAAATAGTTCATATAGGTTAAGGTGCGCAAGGACAAATGCATCAAAAATATTAAAGTTTATACTATTTTTTAAATATTTTTTTAATTTGTTTGATTGGTTTATTTCAGGTTTATGGAACCACTAACAACCGGAGATTATCCTAAAAGCATGAGAGCCATAGTGAAAAACCGATTGCCTAAGTTTACTAAATTGCAATCAAAGCTAGTGAATGGTTCATTTGATTTCATTGGTATAAACTATTACTCTTCTAGCTATATTAACCATTTACCTCCACAAGGCAATGCTCCTCCAAGTTACTTAACAGATCCTATGACTAATACTTCATGTAAGGACACTTATCTATTCTACATTTCTACCTGTGTTAATTAGTTCCTTTAATATTATGATAAATTAAGTATGTTGATTTTGATGATTCTCTCTCTTTATTTTCACAATTGCAGTTGAACAAAATGGAAAACCTCTAGGTCCAAGGGTAAGTCTCTAGTAACTTAAAGTACTACTAAAAAAAAATAAAAAAATTACATCTCTAATTCTCTTATTAAATTTTGTGAGTGAAACATTTTCTTTGTCAAAGTTTAAATCAATTAATAAATAAAACAGTAATAATATATATTTATAATAATTGTATATATAGGCTGCTTCAATTTGGATATACGTTTATCCAAGAGGACTTCGAGATCTTTTGTTATACACTAAGGAGAAATACAACAATCCTGTGGTCTACATTACTGAAAATGGTAAATACACAAATAAATCATATTAATTTTCTTGAATGCCATCATAACTGGAACAATCCTATTATACAAAATGTATGTTTATATTTTGTTTTCTTTCTTATACAAATGTATGTATAAATTTAATTTTGTTCTTATCCTGACTAATTTGAAAGAATATGTATGATATGTACAGGTATGAATGAATTCAACGACGCAACACTTTCTGTAGAAGAAGCTCTTTTGGATACTTACAGAATTGATTACTATTATCGACATTTCTTCTATATTCGTTCCGCAATCAAGTAATAATCTTTCTTTGCTTTTTTTTTTTTTTTAAGAGAAAATACTCTTTGTTTTCAACATTTCCATCTAATATATATTATAAAGTAACAAAAAGATTAATACTATAATATATGCACACAAGTTATGAATTTTCATTTCGTGGTTTTTTTTTTTTTTTACAGGGCCGGCTCGAATGTAAAGGGATTTTTCGCATGGTCATTTTTGGACTGTAATGAATGGTTTGCAGGCTTTACTGTTCGTTTTGGATTAAACTTTGTTGATTACAATGATGGATTGAAAAGGTACCCAAAGCTTTCTGCTCAATGGTACAAAAACTTTCTCAAAAGAAACTAG

Protein sequence

>MS.gene54574.t1

MLALFVVSSVTLTSANGVEVSTPLDIGNLSRSSFPHGFIFGAGSSSYQFEGAVKEGGRGPSIWDTFTHQHPEKIRDGSNADVTVDQYHRYKEDVGIMKDQNMDSYRFSIAWPRILPKGKLSGGINHEGIKYYNNLINELLANGIQPFVTLFHWDLPQVLEDEYGGFLSSLIINDFRDYADLCFKEFGDRVKYWVTFNEPWLFSNGGYAMGTTAPGRCSSPTCLGGNSGTEPYIVTHNQILAHAQAVHVYKTKYQAYQKGKIGITLVTNWFIPLGNNSIPDQKAAKRSLDFQFGWFMEPLTTGDYPKSMRAIVKNRLPKFTKLQSKLVNGSFDFIGINYYSSSYINHLPPQGNAPPSYLTDPMTNTSFEQNGKPLGPRAASIWIYVYPRGLRDLLLYTKEKYNNPVVYITENGMNEFNDATLSVEEALLDTYRIDYYYRHFFYIRSAIKAGSNVKGFFAWSFLDCNEWFAGFTVRFGLNFVDYNDGLKRYPKLSAQWYKNFLKRN