Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86720.t1 | XP_013459175.1 | 96.6 | 528 | 18 | 0 | 1 | 528 | 1 | 528 | 6.00E-306 | 1059.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86720.t1 | B8AVF0 | 64.6 | 477 | 169 | 0 | 38 | 514 | 34 | 510 | 4.5e-193 | 675.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86720.t1 | A0A072UVY4 | 96.6 | 528 | 18 | 0 | 1 | 528 | 1 | 528 | 4.4e-306 | 1059.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049259 | MS.gene86720 | 0.804545 | 2.05E-49 | -1.69E-46 |
| MS.gene049611 | MS.gene86720 | 0.816891 | 4.38E-52 | -1.69E-46 |
| MS.gene049634 | MS.gene86720 | 0.802672 | 5.02E-49 | -1.69E-46 |
| MS.gene050381 | MS.gene86720 | 0.866476 | 2.77E-65 | -1.69E-46 |
| MS.gene050868 | MS.gene86720 | -0.810679 | 1.02E-50 | -1.69E-46 |
| MS.gene050871 | MS.gene86720 | -0.810252 | 1.26E-50 | -1.69E-46 |
| MS.gene050883 | MS.gene86720 | 0.850725 | 1.41E-60 | -1.69E-46 |
| MS.gene051044 | MS.gene86720 | 0.852682 | 3.93E-61 | -1.69E-46 |
| MS.gene051127 | MS.gene86720 | 0.846595 | 1.97E-59 | -1.69E-46 |
| MS.gene051138 | MS.gene86720 | 0.829934 | 3.90E-55 | -1.69E-46 |
| MS.gene051364 | MS.gene86720 | 0.804672 | 1.93E-49 | -1.69E-46 |
| MS.gene052211 | MS.gene86720 | 0.805623 | 1.22E-49 | -1.69E-46 |
| MS.gene053420 | MS.gene86720 | 0.834393 | 3.08E-56 | -1.69E-46 |
| MS.gene053488 | MS.gene86720 | 0.838501 | 2.77E-57 | -1.69E-46 |
| MS.gene053561 | MS.gene86720 | 0.828943 | 6.79E-55 | -1.69E-46 |
| MS.gene053887 | MS.gene86720 | 0.819557 | 1.09E-52 | -1.69E-46 |
| MS.gene054056 | MS.gene86720 | 0.817362 | 3.43E-52 | -1.69E-46 |
| MS.gene054708 | MS.gene86720 | 0.806021 | 1.01E-49 | -1.69E-46 |
| MS.gene055124 | MS.gene86720 | 0.858143 | 1.01E-62 | -1.69E-46 |
| MS.gene055154 | MS.gene86720 | 0.852117 | 5.70E-61 | -1.69E-46 |
| MS.gene055202 | MS.gene86720 | 0.809762 | 1.61E-50 | -1.69E-46 |
| MS.gene055942 | MS.gene86720 | 0.81028 | 1.25E-50 | -1.69E-46 |
| MS.gene056224 | MS.gene86720 | 0.820257 | 7.55E-53 | -1.69E-46 |
| MS.gene056310 | MS.gene86720 | 0.847321 | 1.25E-59 | -1.69E-46 |
| MS.gene056311 | MS.gene86720 | 0.84878 | 4.93E-60 | -1.69E-46 |
| MS.gene056313 | MS.gene86720 | 0.827029 | 1.96E-54 | -1.69E-46 |
| MS.gene056504 | MS.gene86720 | -0.809086 | 2.25E-50 | -1.69E-46 |
| MS.gene056856 | MS.gene86720 | 0.800649 | 1.31E-48 | -1.69E-46 |
| MS.gene057014 | MS.gene86720 | 0.826163 | 3.15E-54 | -1.69E-46 |
| MS.gene057549 | MS.gene86720 | 0.812594 | 3.92E-51 | -1.69E-46 |
| MS.gene058093 | MS.gene86720 | 0.84112 | 5.76E-58 | -1.69E-46 |
| MS.gene058099 | MS.gene86720 | 0.855412 | 6.42E-62 | -1.69E-46 |
| MS.gene058108 | MS.gene86720 | 0.810084 | 1.37E-50 | -1.69E-46 |
| MS.gene058109 | MS.gene86720 | 0.851397 | 9.12E-61 | -1.69E-46 |
| MS.gene058111 | MS.gene86720 | 0.802597 | 5.20E-49 | -1.69E-46 |
| MS.gene058117 | MS.gene86720 | 0.812021 | 5.23E-51 | -1.69E-46 |
| MS.gene058171 | MS.gene86720 | 0.843533 | 1.32E-58 | -1.69E-46 |
| MS.gene058173 | MS.gene86720 | 0.837396 | 5.33E-57 | -1.69E-46 |
| MS.gene058175 | MS.gene86720 | 0.847783 | 9.29E-60 | -1.69E-46 |
| MS.gene058268 | MS.gene86720 | 0.813821 | 2.11E-51 | -1.69E-46 |
| MS.gene058493 | MS.gene86720 | 0.841066 | 5.95E-58 | -1.69E-46 |
| MS.gene058494 | MS.gene86720 | 0.823759 | 1.17E-53 | -1.69E-46 |
| MS.gene058603 | MS.gene86720 | 0.829778 | 4.25E-55 | -1.69E-46 |
| MS.gene058628 | MS.gene86720 | 0.815853 | 7.47E-52 | -1.69E-46 |
| MS.gene058629 | MS.gene86720 | 0.806381 | 8.45E-50 | -1.69E-46 |
| MS.gene058630 | MS.gene86720 | 0.811825 | 5.77E-51 | -1.69E-46 |
| MS.gene059022 | MS.gene86720 | -0.806412 | 8.33E-50 | -1.69E-46 |
| MS.gene059037 | MS.gene86720 | 0.824522 | 7.71E-54 | -1.69E-46 |
| MS.gene059038 | MS.gene86720 | 0.809482 | 1.85E-50 | -1.69E-46 |
| MS.gene059045 | MS.gene86720 | 0.824958 | 6.09E-54 | -1.69E-46 |
| MS.gene059223 | MS.gene86720 | 0.804619 | 1.98E-49 | -1.69E-46 |
| MS.gene059690 | MS.gene86720 | 0.84704 | 1.49E-59 | -1.69E-46 |
| MS.gene059691 | MS.gene86720 | 0.838075 | 3.57E-57 | -1.69E-46 |
| MS.gene059694 | MS.gene86720 | 0.856008 | 4.30E-62 | -1.69E-46 |
| MS.gene059697 | MS.gene86720 | 0.863162 | 3.03E-64 | -1.69E-46 |
| MS.gene059865 | MS.gene86720 | -0.817629 | 2.99E-52 | -1.69E-46 |
| MS.gene059916 | MS.gene86720 | 0.809999 | 1.43E-50 | -1.69E-46 |
| MS.gene059953 | MS.gene86720 | 0.801906 | 7.22E-49 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86720.t1 | MTR_3g028720 | 96.591 | 528 | 18 | 0 | 1 | 528 | 1 | 528 | 0.0 | 1060 |
| MS.gene86720.t1 | MTR_4g066580 | 86.767 | 529 | 69 | 1 | 1 | 528 | 1 | 529 | 0.0 | 974 |
| MS.gene86720.t1 | MTR_3g028720 | 97.386 | 459 | 12 | 0 | 1 | 459 | 1 | 459 | 0.0 | 930 |
| MS.gene86720.t1 | MTR_3g028720 | 96.941 | 425 | 13 | 0 | 1 | 425 | 1 | 425 | 0.0 | 856 |
| MS.gene86720.t1 | MTR_4g066590 | 71.760 | 517 | 142 | 2 | 5 | 521 | 4 | 516 | 0.0 | 803 |
| MS.gene86720.t1 | MTR_4g066630 | 74.089 | 494 | 127 | 1 | 25 | 518 | 27 | 519 | 0.0 | 799 |
| MS.gene86720.t1 | MTR_4g066580 | 87.617 | 428 | 52 | 1 | 1 | 427 | 1 | 428 | 0.0 | 794 |
| MS.gene86720.t1 | MTR_3g028720 | 96.658 | 389 | 13 | 0 | 1 | 389 | 1 | 389 | 0.0 | 786 |
| MS.gene86720.t1 | MTR_2g098540 | 69.455 | 514 | 150 | 1 | 1 | 514 | 1 | 507 | 0.0 | 761 |
| MS.gene86720.t1 | MTR_2g098520 | 69.216 | 510 | 156 | 1 | 6 | 514 | 1 | 510 | 0.0 | 758 |
| MS.gene86720.t1 | MTR_2g098790 | 68.482 | 514 | 162 | 0 | 1 | 514 | 1 | 514 | 0.0 | 756 |
| MS.gene86720.t1 | MTR_6g078450 | 68.085 | 517 | 161 | 2 | 1 | 516 | 1 | 514 | 0.0 | 749 |
| MS.gene86720.t1 | MTR_6g078330 | 67.251 | 513 | 166 | 1 | 3 | 515 | 4 | 514 | 0.0 | 730 |
| MS.gene86720.t1 | MTR_4g066640 | 67.530 | 502 | 159 | 2 | 14 | 514 | 15 | 513 | 0.0 | 726 |
| MS.gene86720.t1 | MTR_4g066240 | 64.648 | 512 | 178 | 1 | 3 | 514 | 4 | 512 | 0.0 | 721 |
| MS.gene86720.t1 | MTR_4g066210 | 65.726 | 496 | 170 | 0 | 22 | 517 | 27 | 522 | 0.0 | 720 |
| MS.gene86720.t1 | MTR_2g098540 | 72.271 | 458 | 127 | 0 | 57 | 514 | 6 | 463 | 0.0 | 718 |
| MS.gene86720.t1 | MTR_4g066240 | 64.522 | 513 | 178 | 2 | 3 | 514 | 4 | 513 | 0.0 | 717 |
| MS.gene86720.t1 | MTR_4g066630 | 75.346 | 434 | 106 | 1 | 25 | 458 | 27 | 459 | 0.0 | 712 |
| MS.gene86720.t1 | MTR_6g078380 | 66.408 | 515 | 163 | 4 | 6 | 515 | 5 | 514 | 0.0 | 705 |
| MS.gene86720.t1 | MTR_5g071520 | 65.267 | 524 | 172 | 2 | 1 | 514 | 1 | 524 | 0.0 | 691 |
| MS.gene86720.t1 | MTR_6g078450 | 68.913 | 460 | 139 | 2 | 1 | 459 | 1 | 457 | 0.0 | 667 |
| MS.gene86720.t1 | MTR_4g066330 | 61.538 | 520 | 169 | 3 | 1 | 515 | 1 | 494 | 0.0 | 658 |
| MS.gene86720.t1 | MTR_4g066630 | 75.188 | 399 | 98 | 1 | 25 | 423 | 27 | 424 | 0.0 | 653 |
| MS.gene86720.t1 | MTR_4g066340 | 68.265 | 438 | 138 | 1 | 78 | 514 | 2 | 439 | 0.0 | 644 |
| MS.gene86720.t1 | MTR_4g066280 | 60.721 | 499 | 164 | 3 | 23 | 515 | 22 | 494 | 0.0 | 636 |
| MS.gene86720.t1 | MTR_4g067040 | 74.935 | 387 | 96 | 1 | 25 | 411 | 22 | 407 | 0.0 | 626 |
| MS.gene86720.t1 | MTR_3g026280 | 61.042 | 480 | 182 | 2 | 35 | 514 | 19 | 493 | 0.0 | 626 |
| MS.gene86720.t1 | MTR_6g078330 | 70.000 | 410 | 123 | 0 | 106 | 515 | 1 | 410 | 0.0 | 619 |
| MS.gene86720.t1 | MTR_4g023000 | 57.948 | 497 | 203 | 3 | 18 | 514 | 4 | 494 | 0.0 | 603 |
| MS.gene86720.t1 | MTR_4g066240 | 64.846 | 421 | 145 | 1 | 3 | 423 | 4 | 421 | 0.0 | 594 |
| MS.gene86720.t1 | MTR_4g067040 | 74.863 | 366 | 91 | 1 | 25 | 390 | 22 | 386 | 0.0 | 593 |
| MS.gene86720.t1 | MTR_6g078330 | 68.702 | 393 | 123 | 0 | 123 | 515 | 18 | 410 | 0.0 | 583 |
| MS.gene86720.t1 | MTR_4g066630 | 74.929 | 351 | 87 | 1 | 25 | 375 | 27 | 376 | 0.0 | 573 |
| MS.gene86720.t1 | MTR_4g015420 | 56.592 | 493 | 174 | 7 | 34 | 514 | 61 | 525 | 0.0 | 561 |
| MS.gene86720.t1 | MTR_2g043200 | 58.159 | 478 | 166 | 6 | 43 | 514 | 70 | 519 | 0.0 | 554 |
| MS.gene86720.t1 | MTR_3g026400 | 54.118 | 510 | 225 | 6 | 6 | 514 | 8 | 509 | 0.0 | 551 |
| MS.gene86720.t1 | MTR_3g026620 | 52.838 | 511 | 235 | 4 | 4 | 514 | 6 | 510 | 0.0 | 542 |
| MS.gene86720.t1 | MTR_4g066640 | 66.327 | 392 | 127 | 3 | 1 | 390 | 1 | 389 | 0.0 | 541 |
| MS.gene86720.t1 | MTR_4g015460 | 55.642 | 514 | 181 | 10 | 15 | 513 | 19 | 500 | 0.0 | 541 |
| MS.gene86720.t1 | MTR_6g078330 | 67.742 | 372 | 118 | 1 | 3 | 374 | 4 | 373 | 0.0 | 535 |
| MS.gene86720.t1 | MTR_3g026400 | 54.812 | 478 | 206 | 6 | 38 | 514 | 10 | 478 | 0.0 | 526 |
| MS.gene86720.t1 | MTR_4g083000 | 51.324 | 491 | 229 | 6 | 27 | 513 | 18 | 502 | 0.0 | 518 |
| MS.gene86720.t1 | MTR_5g044000 | 48.263 | 518 | 237 | 6 | 23 | 512 | 6 | 520 | 4.70e-176 | 507 |
| MS.gene86720.t1 | MTR_4g081530 | 49.795 | 488 | 239 | 4 | 32 | 516 | 18 | 502 | 4.90e-170 | 491 |
| MS.gene86720.t1 | MTR_0110s0040 | 47.441 | 508 | 259 | 6 | 8 | 515 | 14 | 513 | 1.94e-163 | 474 |
| MS.gene86720.t1 | MTR_0110s0030 | 46.602 | 515 | 259 | 7 | 1 | 515 | 15 | 513 | 3.38e-161 | 469 |
| MS.gene86720.t1 | MTR_3g033790 | 46.074 | 484 | 237 | 7 | 38 | 516 | 19 | 483 | 1.97e-154 | 451 |
| MS.gene86720.t1 | MTR_3g033810 | 45.946 | 481 | 243 | 7 | 35 | 513 | 18 | 483 | 6.44e-153 | 447 |
| MS.gene86720.t1 | MTR_4g131810 | 45.344 | 494 | 251 | 6 | 43 | 525 | 33 | 518 | 3.66e-152 | 446 |
| MS.gene86720.t1 | MTR_2g079550 | 46.973 | 479 | 243 | 6 | 38 | 512 | 30 | 501 | 4.34e-151 | 444 |
| MS.gene86720.t1 | MTR_2g079580 | 45.040 | 504 | 266 | 6 | 38 | 537 | 32 | 528 | 1.05e-150 | 442 |
| MS.gene86720.t1 | MTR_2g022760 | 44.981 | 518 | 264 | 7 | 6 | 520 | 18 | 517 | 3.92e-149 | 438 |
| MS.gene86720.t1 | MTR_4g083000 | 50.971 | 412 | 194 | 4 | 106 | 513 | 1 | 408 | 4.93e-147 | 429 |
| MS.gene86720.t1 | MTR_2g022710 | 43.902 | 492 | 270 | 5 | 37 | 526 | 34 | 521 | 3.27e-142 | 421 |
| MS.gene86720.t1 | MTR_4g131800 | 46.105 | 475 | 250 | 5 | 43 | 515 | 521 | 991 | 1.35e-141 | 434 |
| MS.gene86720.t1 | MTR_3g026400 | 57.714 | 350 | 142 | 4 | 6 | 355 | 8 | 351 | 4.92e-141 | 412 |
| MS.gene86720.t1 | MTR_7g068910 | 44.398 | 482 | 250 | 7 | 37 | 515 | 30 | 496 | 6.17e-141 | 417 |
| MS.gene86720.t1 | MTR_5g068740 | 43.878 | 490 | 246 | 10 | 32 | 513 | 21 | 489 | 9.66e-138 | 409 |
| MS.gene86720.t1 | MTR_7g068910 | 43.496 | 492 | 250 | 8 | 37 | 515 | 30 | 506 | 1.01e-137 | 409 |
| MS.gene86720.t1 | MTR_4g016920 | 43.685 | 483 | 254 | 7 | 37 | 516 | 26 | 493 | 3.85e-137 | 407 |
| MS.gene86720.t1 | MTR_7g033860 | 44.792 | 480 | 240 | 8 | 40 | 512 | 50 | 511 | 6.38e-136 | 404 |
| MS.gene86720.t1 | MTR_1g088610 | 41.426 | 519 | 267 | 9 | 8 | 519 | 6 | 494 | 5.65e-133 | 401 |
| MS.gene86720.t1 | MTR_1g088610 | 35.043 | 117 | 69 | 2 | 398 | 513 | 503 | 613 | 4.99e-13 | 72.0 |
| MS.gene86720.t1 | MTR_0108s0030 | 43.763 | 473 | 237 | 5 | 40 | 512 | 5 | 448 | 7.32e-133 | 394 |
| MS.gene86720.t1 | MTR_2g079580 | 47.179 | 390 | 196 | 5 | 38 | 423 | 32 | 415 | 6.40e-125 | 372 |
| MS.gene86720.t1 | MTR_2g022760 | 46.172 | 418 | 218 | 5 | 106 | 520 | 1 | 414 | 1.60e-123 | 369 |
| MS.gene86720.t1 | MTR_7g051610 | 43.789 | 475 | 247 | 6 | 39 | 512 | 76 | 531 | 2.12e-123 | 373 |
| MS.gene86720.t1 | MTR_7g051510 | 42.531 | 482 | 253 | 7 | 39 | 517 | 76 | 536 | 1.63e-122 | 370 |
| MS.gene86720.t1 | MTR_0110s0040 | 49.036 | 363 | 180 | 4 | 9 | 371 | 15 | 372 | 6.77e-120 | 359 |
| MS.gene86720.t1 | MTR_2g022710 | 44.104 | 424 | 232 | 4 | 37 | 458 | 34 | 454 | 1.22e-118 | 358 |
| MS.gene86720.t1 | MTR_2g022710 | 44.104 | 424 | 232 | 4 | 37 | 458 | 34 | 454 | 2.21e-118 | 358 |
| MS.gene86720.t1 | MTR_7g051650 | 41.458 | 480 | 252 | 7 | 39 | 512 | 76 | 532 | 2.01e-117 | 357 |
| MS.gene86720.t1 | MTR_2g022710 | 42.553 | 423 | 238 | 4 | 106 | 526 | 1 | 420 | 3.32e-117 | 353 |
| MS.gene86720.t1 | MTR_7g051650 | 41.300 | 477 | 253 | 7 | 39 | 512 | 76 | 528 | 7.46e-117 | 356 |
| MS.gene86720.t1 | MTR_2g022710 | 46.015 | 389 | 205 | 4 | 37 | 423 | 34 | 419 | 1.52e-116 | 351 |
| MS.gene86720.t1 | MTR_1g088630 | 42.457 | 464 | 215 | 12 | 57 | 513 | 14 | 432 | 2.25e-114 | 347 |
| MS.gene86720.t1 | MTR_7g068900 | 42.755 | 421 | 215 | 7 | 101 | 513 | 17 | 419 | 1.22e-113 | 346 |
| MS.gene86720.t1 | MTR_2g022710 | 45.358 | 377 | 201 | 4 | 37 | 411 | 34 | 407 | 2.53e-110 | 335 |
| MS.gene86720.t1 | MTR_4g016920 | 42.271 | 414 | 222 | 6 | 106 | 516 | 1 | 400 | 3.72e-109 | 332 |
| MS.gene86720.t1 | MTR_2g022710 | 46.307 | 352 | 184 | 4 | 37 | 386 | 34 | 382 | 1.20e-102 | 316 |
| MS.gene86720.t1 | MTR_1g088630 | 48.758 | 322 | 129 | 6 | 40 | 357 | 29 | 318 | 3.49e-102 | 312 |
| MS.gene86720.t1 | MTR_7g056747 | 41.148 | 418 | 220 | 4 | 100 | 516 | 9 | 401 | 3.97e-100 | 308 |
| MS.gene86720.t1 | MTR_1g088630 | 51.481 | 270 | 119 | 4 | 39 | 304 | 28 | 289 | 5.84e-93 | 286 |
| MS.gene86720.t1 | MTR_4g016920 | 48.889 | 270 | 135 | 2 | 106 | 374 | 1 | 268 | 1.50e-88 | 275 |
| MS.gene86720.t1 | MTR_0110s0020 | 48.496 | 266 | 124 | 5 | 1 | 266 | 15 | 267 | 4.51e-81 | 256 |
| MS.gene86720.t1 | MTR_5g069350 | 42.775 | 173 | 58 | 6 | 352 | 514 | 48 | 189 | 2.49e-30 | 117 |
| MS.gene86720.t1 | MTR_4g122980 | 26.150 | 413 | 224 | 13 | 102 | 504 | 183 | 524 | 1.76e-26 | 114 |
| MS.gene86720.t1 | MTR_8g038650 | 38.843 | 121 | 64 | 1 | 249 | 359 | 32 | 152 | 2.65e-23 | 97.1 |
| MS.gene86720.t1 | MTR_8g038650 | 48.571 | 70 | 35 | 1 | 47 | 116 | 7 | 75 | 1.54e-13 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86720.t1 | AT2G44480 | 57.233 | 477 | 203 | 1 | 36 | 512 | 64 | 539 | 0.0 | 588 |
| MS.gene86720.t1 | AT2G44480 | 56.531 | 490 | 210 | 2 | 25 | 512 | 20 | 508 | 0.0 | 588 |
| MS.gene86720.t1 | AT5G44640 | 54.297 | 512 | 222 | 4 | 7 | 517 | 6 | 506 | 0.0 | 577 |
| MS.gene86720.t1 | AT5G42260 | 55.666 | 503 | 211 | 4 | 7 | 508 | 6 | 497 | 0.0 | 576 |
| MS.gene86720.t1 | AT2G44450 | 56.067 | 478 | 205 | 2 | 38 | 515 | 31 | 503 | 0.0 | 566 |
| MS.gene86720.t1 | AT3G60130 | 55.556 | 477 | 206 | 3 | 38 | 513 | 30 | 501 | 0.0 | 551 |
| MS.gene86720.t1 | AT2G25630 | 54.622 | 476 | 193 | 4 | 38 | 512 | 30 | 483 | 0.0 | 535 |
| MS.gene86720.t1 | AT5G24550 | 51.829 | 492 | 224 | 6 | 38 | 521 | 32 | 518 | 0.0 | 526 |
| MS.gene86720.t1 | AT1G51470 | 52.381 | 483 | 216 | 7 | 34 | 514 | 41 | 511 | 0.0 | 522 |
| MS.gene86720.t1 | AT3G60140 | 47.969 | 517 | 253 | 5 | 1 | 514 | 1 | 504 | 0.0 | 521 |
| MS.gene86720.t1 | AT1G47600 | 51.346 | 483 | 221 | 7 | 34 | 514 | 41 | 511 | 1.53e-178 | 513 |
| MS.gene86720.t1 | AT1G47600 | 51.346 | 483 | 220 | 7 | 34 | 514 | 41 | 510 | 6.72e-178 | 511 |
| MS.gene86720.t1 | AT5G24540 | 49.326 | 519 | 248 | 7 | 9 | 519 | 5 | 516 | 2.00e-176 | 508 |
| MS.gene86720.t1 | AT3G60120 | 50.100 | 501 | 239 | 7 | 37 | 531 | 13 | 508 | 4.71e-176 | 508 |
| MS.gene86720.t1 | AT2G44490 | 50.415 | 482 | 233 | 5 | 37 | 513 | 13 | 493 | 1.04e-174 | 505 |
| MS.gene86720.t1 | AT2G44480 | 56.020 | 407 | 178 | 1 | 106 | 512 | 1 | 406 | 1.31e-174 | 499 |
| MS.gene86720.t1 | AT2G44470 | 48.750 | 480 | 242 | 4 | 38 | 514 | 29 | 507 | 4.29e-174 | 504 |
| MS.gene86720.t1 | AT1G26560 | 49.290 | 493 | 230 | 6 | 30 | 512 | 24 | 506 | 1.01e-172 | 498 |
| MS.gene86720.t1 | AT5G54570 | 50.104 | 481 | 231 | 4 | 37 | 512 | 29 | 505 | 2.69e-170 | 493 |
| MS.gene86720.t1 | AT2G44460 | 49.390 | 492 | 244 | 5 | 34 | 522 | 25 | 514 | 8.62e-170 | 493 |
| MS.gene86720.t1 | AT3G18080 | 49.794 | 486 | 236 | 6 | 33 | 517 | 34 | 512 | 1.74e-167 | 485 |
| MS.gene86720.t1 | AT5G25980 | 47.287 | 516 | 261 | 9 | 6 | 517 | 19 | 527 | 3.51e-166 | 483 |
| MS.gene86720.t1 | AT3G60130 | 54.524 | 420 | 185 | 3 | 95 | 513 | 35 | 449 | 8.45e-164 | 474 |
| MS.gene86720.t1 | AT3G18070 | 46.296 | 486 | 245 | 7 | 33 | 517 | 25 | 495 | 6.04e-158 | 460 |
| MS.gene86720.t1 | AT3G18070 | 46.296 | 486 | 251 | 7 | 33 | 517 | 25 | 501 | 5.51e-157 | 457 |
| MS.gene86720.t1 | AT3G60130 | 53.333 | 420 | 179 | 4 | 95 | 513 | 35 | 438 | 3.18e-156 | 454 |
| MS.gene86720.t1 | AT3G09260 | 45.868 | 484 | 255 | 6 | 38 | 517 | 35 | 515 | 2.66e-154 | 452 |
| MS.gene86720.t1 | AT3G03640 | 45.041 | 484 | 260 | 4 | 36 | 514 | 32 | 514 | 4.15e-154 | 451 |
| MS.gene86720.t1 | AT1G75940 | 47.035 | 489 | 247 | 8 | 38 | 517 | 37 | 522 | 6.55e-154 | 451 |
| MS.gene86720.t1 | AT3G21370 | 46.296 | 486 | 247 | 8 | 37 | 513 | 32 | 512 | 7.22e-154 | 451 |
| MS.gene86720.t1 | AT5G36890 | 47.182 | 479 | 240 | 4 | 40 | 517 | 18 | 484 | 1.22e-153 | 449 |
| MS.gene86720.t1 | AT5G36890 | 47.182 | 479 | 240 | 4 | 40 | 517 | 18 | 484 | 1.39e-153 | 448 |
| MS.gene86720.t1 | AT5G26000 | 44.894 | 519 | 263 | 11 | 7 | 512 | 3 | 511 | 2.84e-150 | 442 |
| MS.gene86720.t1 | AT2G32860 | 45.248 | 484 | 260 | 5 | 37 | 516 | 93 | 575 | 6.64e-150 | 444 |
| MS.gene86720.t1 | AT2G44470 | 47.518 | 423 | 219 | 3 | 38 | 458 | 29 | 450 | 3.40e-149 | 436 |
| MS.gene86720.t1 | AT5G54570 | 50.000 | 426 | 205 | 3 | 37 | 458 | 29 | 450 | 5.03e-149 | 436 |
| MS.gene86720.t1 | AT5G24540 | 50.708 | 424 | 205 | 4 | 38 | 458 | 32 | 454 | 8.60e-149 | 435 |
| MS.gene86720.t1 | AT2G32860 | 44.628 | 484 | 264 | 4 | 37 | 516 | 93 | 576 | 1.31e-148 | 440 |
| MS.gene86720.t1 | AT1G52400 | 43.429 | 525 | 279 | 11 | 1 | 515 | 2 | 518 | 3.71e-148 | 436 |
| MS.gene86720.t1 | AT1G52400 | 43.429 | 525 | 279 | 11 | 1 | 515 | 2 | 518 | 3.71e-148 | 436 |
| MS.gene86720.t1 | AT5G28510 | 44.828 | 493 | 260 | 7 | 29 | 512 | 30 | 519 | 8.73e-148 | 435 |
| MS.gene86720.t1 | AT1G66280 | 46.881 | 497 | 246 | 11 | 26 | 512 | 22 | 510 | 9.92e-147 | 432 |
| MS.gene86720.t1 | AT1G66270 | 45.110 | 501 | 262 | 9 | 24 | 517 | 21 | 515 | 1.28e-145 | 429 |
| MS.gene86720.t1 | AT3G60140 | 46.588 | 425 | 212 | 4 | 1 | 423 | 1 | 412 | 4.07e-144 | 423 |
| MS.gene86720.t1 | AT5G25980 | 46.711 | 456 | 234 | 7 | 6 | 459 | 19 | 467 | 1.91e-143 | 422 |
| MS.gene86720.t1 | AT5G25980 | 46.711 | 456 | 234 | 7 | 6 | 459 | 19 | 467 | 1.91e-143 | 422 |
| MS.gene86720.t1 | AT1G02850 | 45.756 | 483 | 241 | 9 | 35 | 513 | 21 | 486 | 7.72e-143 | 421 |
| MS.gene86720.t1 | AT1G66270 | 44.711 | 501 | 262 | 10 | 24 | 517 | 21 | 513 | 3.54e-142 | 421 |
| MS.gene86720.t1 | AT1G61820 | 43.763 | 489 | 269 | 6 | 33 | 518 | 25 | 510 | 1.01e-140 | 417 |
| MS.gene86720.t1 | AT4G27830 | 44.099 | 483 | 249 | 7 | 34 | 512 | 19 | 484 | 2.43e-140 | 416 |
| MS.gene86720.t1 | AT1G61810 | 44.654 | 477 | 258 | 5 | 43 | 516 | 38 | 511 | 3.99e-140 | 415 |
| MS.gene86720.t1 | AT5G54570 | 46.154 | 442 | 229 | 4 | 106 | 542 | 1 | 438 | 1.60e-139 | 410 |
| MS.gene86720.t1 | AT4G21760 | 41.892 | 518 | 288 | 7 | 3 | 518 | 21 | 527 | 1.76e-139 | 414 |
| MS.gene86720.t1 | AT1G02850 | 43.874 | 506 | 240 | 10 | 35 | 513 | 21 | 509 | 1.44e-138 | 411 |
| MS.gene86720.t1 | AT2G44450 | 53.501 | 357 | 161 | 2 | 159 | 515 | 1 | 352 | 6.67e-138 | 404 |
| MS.gene86720.t1 | AT2G44480 | 59.683 | 315 | 124 | 2 | 25 | 337 | 51 | 364 | 3.40e-137 | 403 |
| MS.gene86720.t1 | AT1G02850 | 44.181 | 507 | 238 | 11 | 35 | 513 | 21 | 510 | 3.54e-137 | 408 |
| MS.gene86720.t1 | AT1G61810 | 42.772 | 505 | 272 | 6 | 43 | 533 | 38 | 539 | 3.96e-136 | 406 |
| MS.gene86720.t1 | AT1G60090 | 42.798 | 486 | 254 | 8 | 38 | 519 | 24 | 489 | 1.94e-135 | 403 |
| MS.gene86720.t1 | AT4G21760 | 41.473 | 516 | 283 | 8 | 3 | 518 | 21 | 517 | 3.37e-133 | 398 |
| MS.gene86720.t1 | AT4G27820 | 44.583 | 480 | 243 | 7 | 37 | 512 | 22 | 482 | 6.56e-133 | 396 |
| MS.gene86720.t1 | AT4G22100 | 42.562 | 484 | 256 | 9 | 40 | 519 | 24 | 489 | 2.00e-132 | 395 |
| MS.gene86720.t1 | AT5G26000 | 44.828 | 464 | 235 | 9 | 7 | 459 | 3 | 456 | 2.44e-132 | 393 |
| MS.gene86720.t1 | AT1G02850 | 44.306 | 483 | 221 | 10 | 35 | 513 | 21 | 459 | 5.69e-132 | 392 |
| MS.gene86720.t1 | AT1G60090 | 41.224 | 490 | 263 | 9 | 38 | 519 | 24 | 496 | 1.81e-131 | 393 |
| MS.gene86720.t1 | AT3G62750 | 42.116 | 482 | 247 | 8 | 35 | 512 | 20 | 473 | 8.15e-130 | 388 |
| MS.gene86720.t1 | AT3G62750 | 41.199 | 517 | 269 | 10 | 3 | 512 | 11 | 499 | 1.10e-129 | 389 |
| MS.gene86720.t1 | AT2G44470 | 49.851 | 335 | 166 | 2 | 38 | 371 | 29 | 362 | 4.12e-127 | 377 |
| MS.gene86720.t1 | AT1G45191 | 41.649 | 485 | 255 | 9 | 39 | 519 | 30 | 490 | 1.11e-126 | 380 |
| MS.gene86720.t1 | AT1G52400 | 43.534 | 464 | 251 | 8 | 1 | 458 | 2 | 460 | 2.96e-126 | 378 |
| MS.gene86720.t1 | AT1G45191 | 41.237 | 485 | 263 | 9 | 39 | 519 | 30 | 496 | 5.66e-125 | 376 |
| MS.gene86720.t1 | AT1G45191 | 40.947 | 486 | 268 | 8 | 39 | 519 | 30 | 501 | 6.24e-124 | 374 |
| MS.gene86720.t1 | AT1G45191 | 40.524 | 496 | 268 | 9 | 39 | 519 | 30 | 513 | 7.94e-122 | 369 |
| MS.gene86720.t1 | AT3G62740 | 39.419 | 482 | 265 | 9 | 35 | 512 | 20 | 478 | 1.39e-120 | 365 |
| MS.gene86720.t1 | AT1G02850 | 45.894 | 414 | 189 | 7 | 35 | 423 | 21 | 424 | 1.30e-119 | 360 |
| MS.gene86720.t1 | AT1G61810 | 44.282 | 411 | 223 | 5 | 109 | 516 | 4 | 411 | 1.51e-115 | 348 |
| MS.gene86720.t1 | AT2G44460 | 49.593 | 369 | 182 | 4 | 157 | 522 | 1 | 368 | 3.44e-115 | 348 |
| MS.gene86720.t1 | AT5G48375 | 42.404 | 441 | 186 | 6 | 38 | 477 | 38 | 411 | 4.17e-115 | 348 |
| MS.gene86720.t1 | AT3G62750 | 40.860 | 465 | 241 | 9 | 3 | 461 | 11 | 447 | 6.36e-113 | 343 |
| MS.gene86720.t1 | AT2G44480 | 52.013 | 298 | 142 | 1 | 215 | 512 | 6 | 302 | 1.34e-111 | 335 |
| MS.gene86720.t1 | AT1G51490 | 49.570 | 349 | 159 | 7 | 45 | 390 | 27 | 361 | 1.64e-111 | 338 |
| MS.gene86720.t1 | AT1G61810 | 44.792 | 384 | 207 | 4 | 43 | 423 | 38 | 419 | 1.72e-111 | 338 |
| MS.gene86720.t1 | AT4G27830 | 42.579 | 411 | 217 | 6 | 106 | 512 | 1 | 396 | 1.36e-109 | 333 |
| MS.gene86720.t1 | AT3G18070 | 48.308 | 325 | 162 | 4 | 33 | 357 | 25 | 343 | 2.71e-108 | 329 |
| MS.gene86720.t1 | AT3G62750 | 45.748 | 341 | 165 | 5 | 35 | 371 | 20 | 344 | 6.39e-106 | 322 |
| MS.gene86720.t1 | AT3G62750 | 45.748 | 341 | 165 | 5 | 35 | 371 | 20 | 344 | 6.39e-106 | 322 |
| MS.gene86720.t1 | AT3G62740 | 39.813 | 427 | 231 | 8 | 35 | 458 | 20 | 423 | 8.38e-106 | 324 |
| MS.gene86720.t1 | AT1G45191 | 47.649 | 319 | 159 | 3 | 39 | 357 | 30 | 340 | 9.42e-106 | 323 |
| MS.gene86720.t1 | AT1G45191 | 47.649 | 319 | 159 | 3 | 39 | 357 | 30 | 340 | 1.28e-105 | 323 |
| MS.gene86720.t1 | AT1G60270 | 45.821 | 347 | 177 | 5 | 38 | 381 | 24 | 362 | 2.65e-105 | 321 |
| MS.gene86720.t1 | AT3G62750 | 45.748 | 341 | 165 | 5 | 35 | 371 | 46 | 370 | 6.74e-105 | 322 |
| MS.gene86720.t1 | AT4G27820 | 42.579 | 411 | 218 | 6 | 106 | 512 | 1 | 397 | 3.28e-102 | 315 |
| MS.gene86720.t1 | AT4G27820 | 42.579 | 411 | 218 | 6 | 106 | 512 | 1 | 397 | 3.28e-102 | 315 |
| MS.gene86720.t1 | AT1G61820 | 43.243 | 370 | 205 | 5 | 152 | 518 | 4 | 371 | 3.77e-101 | 310 |
| MS.gene86720.t1 | AT3G18070 | 45.758 | 330 | 174 | 4 | 189 | 517 | 99 | 424 | 1.17e-100 | 310 |
| MS.gene86720.t1 | AT3G18070 | 48.529 | 68 | 34 | 1 | 33 | 100 | 25 | 91 | 2.65e-14 | 75.5 |
| MS.gene86720.t1 | AT3G62750 | 39.903 | 411 | 220 | 7 | 106 | 512 | 1 | 388 | 9.47e-98 | 303 |
| MS.gene86720.t1 | AT3G62750 | 39.903 | 411 | 220 | 7 | 106 | 512 | 1 | 388 | 9.47e-98 | 303 |
| MS.gene86720.t1 | AT3G18070 | 45.253 | 316 | 168 | 4 | 203 | 517 | 1 | 312 | 5.92e-95 | 292 |
| MS.gene86720.t1 | AT1G61810 | 51.698 | 265 | 126 | 2 | 43 | 307 | 38 | 300 | 8.02e-92 | 284 |
| MS.gene86720.t1 | AT1G60270 | 45.487 | 277 | 144 | 4 | 108 | 381 | 3 | 275 | 5.81e-78 | 247 |
| MS.gene86720.t1 | AT3G18070 | 45.570 | 237 | 127 | 2 | 190 | 425 | 100 | 335 | 3.44e-68 | 224 |
| MS.gene86720.t1 | AT3G18070 | 48.529 | 68 | 34 | 1 | 33 | 100 | 25 | 91 | 1.62e-14 | 75.5 |
| MS.gene86720.t1 | AT3G18070 | 44.643 | 224 | 122 | 2 | 203 | 425 | 1 | 223 | 9.66e-63 | 206 |
| MS.gene86720.t1 | AT5G16580 | 36.424 | 302 | 159 | 8 | 178 | 469 | 21 | 299 | 2.90e-51 | 177 |
| MS.gene86720.t1 | AT3G06510 | 27.865 | 445 | 230 | 19 | 101 | 513 | 159 | 544 | 2.13e-28 | 120 |
| MS.gene86720.t1 | AT3G06510 | 26.995 | 426 | 224 | 16 | 101 | 513 | 159 | 510 | 6.27e-28 | 118 |
Find 107 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATGCTGAACTTTGCTTTA+AGG | 0.084262 | 3.4:+22657049 | MS.gene86720:CDS |
| GTTGATTGATTACAGGTTTA+TGG | 0.107499 | 3.4:+22657750 | MS.gene86720:intron |
| TATATATACCTGGATATTTA+TGG | 0.130865 | 3.4:-22655953 | None:intergenic |
| TAATTTCATCAACGAGTTAT+TGG | 0.184666 | 3.4:+22656610 | MS.gene86720:CDS |
| TTCCCCAAAGGATTTATATT+TGG | 0.190969 | 3.4:+22655611 | MS.gene86720:CDS |
| GAACTTTGCTTTAAGGAATT+TGG | 0.193613 | 3.4:+22657056 | MS.gene86720:CDS |
| TTGATTTACATCACTGAAAA+TGG | 0.211288 | 3.4:+22658290 | MS.gene86720:CDS |
| ACATTTGTGGATTACAATAA+TGG | 0.266219 | 3.4:+22658718 | MS.gene86720:CDS |
| TAGCTACTTGACAGATTCTT+TGG | 0.267402 | 3.4:+22657948 | MS.gene86720:CDS |
| GAATCACCACCGGTGCAATT+TGG | 0.289089 | 3.4:-22657185 | None:intergenic |
| GAAACTCAAAAGGGTGTAAT+AGG | 0.295734 | 3.4:+22657454 | MS.gene86720:CDS |
| TGGGAAACCTATTGGTATTA+AGG | 0.303617 | 3.4:+22658099 | MS.gene86720:CDS |
| TGCTCCAAATATAAATCCTT+TGG | 0.329647 | 3.4:-22655615 | None:intergenic |
| CCATGGAGTTACAGTCAAAA+TGG | 0.331262 | 3.4:+22657113 | MS.gene86720:CDS |
| TTGGTGATAGAGTGAAATAT+TGG | 0.342182 | 3.4:+22657075 | MS.gene86720:CDS |
| GTGGTAGAACACCAAGTATA+TGG | 0.346943 | 3.4:+22655919 | MS.gene86720:CDS |
| TTTATTTATGATTAGTTTGA+AGG | 0.349443 | 3.4:+22655882 | MS.gene86720:intron |
| CTTGTACACATTGACGGCTT+TGG | 0.350423 | 3.4:-22657255 | None:intergenic |
| GCTCCAAATATAAATCCTTT+GGG | 0.358972 | 3.4:-22655614 | None:intergenic |
| ATATATACCTGGATATTTAT+GGG | 0.366623 | 3.4:-22655952 | None:intergenic |
| GCACAAGTGCAAAAGCAATT+AGG | 0.372097 | 3.4:-22655508 | None:intergenic |
| TGGTAGTGCGTGACAATATA+GGG | 0.377896 | 3.4:-22657218 | None:intergenic |
| CACCAGGTCGTTGTTCTAGT+TGG | 0.391277 | 3.4:+22657156 | MS.gene86720:CDS |
| ATCAACGAGTTATTGGCTAA+TGG | 0.391833 | 3.4:+22656617 | MS.gene86720:CDS |
| TCGGGTTATTCCGTGAGATT+TGG | 0.395849 | 3.4:+22658691 | MS.gene86720:CDS |
| CTTTGTCTTGTACACATTGA+CGG | 0.398620 | 3.4:-22657261 | None:intergenic |
| TTGGTAGTGCGTGACAATAT+AGG | 0.399199 | 3.4:-22657219 | None:intergenic |
| AAGTGTCCATGAGCGATTCT+TGG | 0.413109 | 3.4:-22658465 | None:intergenic |
| CTAGGCAACCTCATCGTCAT+AGG | 0.420095 | 3.4:-22659354 | None:intergenic |
| GGATAATCTCCTGTTGTCAA+TGG | 0.420526 | 3.4:-22657775 | None:intergenic |
| GATAATATAGATGACGATAA+TGG | 0.420645 | 3.4:-22658501 | None:intergenic |
| GTATAACCTTGGTAGCTAAC+TGG | 0.426224 | 3.4:+22657476 | MS.gene86720:CDS |
| AGCAAAGTTCAGCATAGTCT+TGG | 0.431539 | 3.4:-22657043 | None:intergenic |
| TGGTGATAGAGTGAAATATT+GGG | 0.433375 | 3.4:+22657076 | MS.gene86720:CDS |
| TTTATGGATCCATTGACAAC+AGG | 0.436947 | 3.4:+22657766 | MS.gene86720:CDS |
| TAATTGCAGTTGAGCGAAAT+GGG | 0.439736 | 3.4:+22658080 | MS.gene86720:intron |
| AGAGCTGTTGATTTCATGTA+TGG | 0.448211 | 3.4:+22657544 | MS.gene86720:CDS |
| TTAATTGCAGTTGAGCGAAA+TGG | 0.450417 | 3.4:+22658079 | MS.gene86720:intron |
| ACATGTGCAGGAAACTCAAA+AGG | 0.455499 | 3.4:+22657444 | MS.gene86720:intron |
| GAGCGAAATGGGAAACCTAT+TGG | 0.456595 | 3.4:+22658091 | MS.gene86720:CDS |
| TTATGCAGATTGCTTCTGAT+TGG | 0.460654 | 3.4:+22658201 | MS.gene86720:intron |
| TTTCAGTGATGTAAATCAAC+GGG | 0.461224 | 3.4:-22658286 | None:intergenic |
| AGTCAAAATGGCTATGCAAA+TGG | 0.462239 | 3.4:+22657125 | MS.gene86720:CDS |
| AAAGGATTTATATTTGGAGC+AGG | 0.463085 | 3.4:+22655617 | MS.gene86720:CDS |
| GGTCTAGCATTGCTTAGAAA+TGG | 0.463232 | 3.4:-22657925 | None:intergenic |
| TGACGTACCTTAATACCAAT+AGG | 0.465150 | 3.4:-22658106 | None:intergenic |
| TGTGTACAAGACAAAGTATC+AGG | 0.470745 | 3.4:+22657268 | MS.gene86720:CDS |
| CATACAGATTCTCCTTATCC+TGG | 0.474985 | 3.4:+22656424 | MS.gene86720:CDS |
| AATTCAATAGAAAACAATCT+AGG | 0.483802 | 3.4:+22657836 | MS.gene86720:CDS |
| AAAAGATCACGAATTCCTCT+TGG | 0.485304 | 3.4:-22658236 | None:intergenic |
| AAAAGCATGAGATCCCTTGT+TGG | 0.488472 | 3.4:+22657799 | MS.gene86720:CDS |
| CTTTGGCATGAGCTAGAAGT+TGG | 0.494277 | 3.4:-22657238 | None:intergenic |
| GAGATTTGGAATGACATTTG+TGG | 0.496815 | 3.4:+22658705 | MS.gene86720:CDS |
| AAACAATCTAGGCTACTCAT+TGG | 0.502749 | 3.4:+22657847 | MS.gene86720:CDS |
| TTTGAAGGTGCAGCAAATGA+AGG | 0.505148 | 3.4:+22655897 | MS.gene86720:CDS |
| TACTCATCTTCTAAAACTTG+TGG | 0.505778 | 3.4:-22656769 | None:intergenic |
| ACGTCCAAGGATATTACATA+TGG | 0.509867 | 3.4:+22658641 | MS.gene86720:CDS |
| CAAAAGCAATTAGGCAGAGA+AGG | 0.515479 | 3.4:-22655499 | None:intergenic |
| ACTCATCTTCTAAAACTTGT+GGG | 0.516161 | 3.4:-22656768 | None:intergenic |
| AATCATCAAGGATATGAACT+TGG | 0.522377 | 3.4:+22656398 | MS.gene86720:CDS |
| TGGTAGAACACCAAGTATAT+GGG | 0.523979 | 3.4:+22655920 | MS.gene86720:CDS |
| AGGACCATATGTAATATCCT+TGG | 0.529150 | 3.4:-22658645 | None:intergenic |
| GTAATTAATTACCTGGTATG+AGG | 0.530752 | 3.4:-22655645 | None:intergenic |
| CAATATTCTAGACCAGGATA+AGG | 0.535004 | 3.4:-22656436 | None:intergenic |
| AGCAGGATCTTCCTCATACC+AGG | 0.542249 | 3.4:+22655634 | MS.gene86720:CDS |
| AAAGAATCTGTCAAGTAGCT+AGG | 0.542781 | 3.4:-22657946 | None:intergenic |
| ACTTTCACCCATAAATATCC+AGG | 0.543624 | 3.4:+22655945 | MS.gene86720:CDS |
| TTGGTAATCTTGCTCCAACA+AGG | 0.556284 | 3.4:-22657813 | None:intergenic |
| CTCAATCGCGGAATCACCAC+CGG | 0.558060 | 3.4:-22657195 | None:intergenic |
| ACGAGAAACTTTCTGCATTG+TGG | 0.561392 | 3.4:+22658752 | MS.gene86720:CDS |
| TGGTAATCTTGCTCCAACAA+GGG | 0.565723 | 3.4:-22657812 | None:intergenic |
| GCAAATGGACGAATGGCACC+AGG | 0.570578 | 3.4:+22657140 | MS.gene86720:CDS |
| TTAGAAACTCACACTATGAG+AGG | 0.571715 | 3.4:-22656808 | None:intergenic |
| GTAGTTGTGATATGAATCAA+TGG | 0.572496 | 3.4:-22656117 | None:intergenic |
| GGAAGATGTTAGAATCATCA+AGG | 0.575017 | 3.4:+22656386 | MS.gene86720:intron |
| ATCGGTCCAAGAATCGCTCA+TGG | 0.576413 | 3.4:+22658459 | MS.gene86720:CDS |
| AATGAAGCAACATCAAGAAG+TGG | 0.577727 | 3.4:-22655575 | None:intergenic |
| AGTAGAAACAGTTTCCCCAA+AGG | 0.582354 | 3.4:+22655599 | MS.gene86720:CDS |
| GTGAAAGTATCCCATATACT+TGG | 0.583793 | 3.4:-22655930 | None:intergenic |
| GTACAGTGATCCTACACTAT+CGG | 0.588636 | 3.4:+22658441 | MS.gene86720:CDS |
| TGGCTATGCAAATGGACGAA+TGG | 0.589653 | 3.4:+22657133 | MS.gene86720:CDS |
| TAGAAACTCACACTATGAGA+GGG | 0.590350 | 3.4:-22656807 | None:intergenic |
| CCATTCAAAATTGTTGAACA+AGG | 0.595041 | 3.4:-22658665 | None:intergenic |
| TGGTTGAATCCAAATTGCAC+CGG | 0.596108 | 3.4:+22657176 | MS.gene86720:CDS |
| AAATGTCATTCCAAATCTCA+CGG | 0.598464 | 3.4:-22658701 | None:intergenic |
| CTCCAAATATAAATCCTTTG+GGG | 0.598486 | 3.4:-22655613 | None:intergenic |
| TGGTTGTATGTTTATCCAAG+AGG | 0.604560 | 3.4:+22658221 | MS.gene86720:CDS |
| ATAATAGAAGGAAAGCATAG+TGG | 0.607062 | 3.4:+22656554 | MS.gene86720:intron |
| CAAGTACCAGTTAGCTACCA+AGG | 0.611246 | 3.4:-22657482 | None:intergenic |
| AGTGGTGGCATAAATCAAGA+AGG | 0.614322 | 3.4:+22656572 | MS.gene86720:CDS |
| ACTTGGCAATATTCTAGACC+AGG | 0.618905 | 3.4:-22656442 | None:intergenic |
| GGGTTACTTTGAATGAACCA+TGG | 0.621045 | 3.4:+22657096 | MS.gene86720:CDS |
| AGGCAAGGTGCAAACGTCCA+AGG | 0.624303 | 3.4:+22658628 | MS.gene86720:intron |
| CTGTTGATTTCATGTATGGA+TGG | 0.624632 | 3.4:+22657548 | MS.gene86720:CDS |
| GACAATATAGGGCTCAATCG+CGG | 0.624861 | 3.4:-22657207 | None:intergenic |
| CATGTGCAGGAAACTCAAAA+GGG | 0.627665 | 3.4:+22657445 | MS.gene86720:intron |
| TCAGATTTGGAATCTGAGAG+TGG | 0.642241 | 3.4:-22657505 | None:intergenic |
| GGGTGTAATAGGTATAACCT+TGG | 0.642396 | 3.4:+22657465 | MS.gene86720:CDS |
| CACATGTTGAAGTACTCGAA+CGG | 0.648764 | 3.4:-22659325 | None:intergenic |
| ATAGAAGGAAAGCATAGTGG+TGG | 0.648918 | 3.4:+22656557 | MS.gene86720:intron |
| TGATTCATATCACAACTACA+AGG | 0.653125 | 3.4:+22656121 | MS.gene86720:CDS |
| GATTCTTGGACCGATAGTGT+AGG | 0.670328 | 3.4:-22658451 | None:intergenic |
| TTGAATCCAAATTGCACCGG+TGG | 0.672179 | 3.4:+22657179 | MS.gene86720:CDS |
| GAAGGTGCAGCAAATGAAGG+TGG | 0.681013 | 3.4:+22655900 | MS.gene86720:CDS |
| AACCAACTAGAACAACGACC+TGG | 0.698527 | 3.4:-22657158 | None:intergenic |
| TGATGTATCCTATGACGATG+AGG | 0.720601 | 3.4:+22659346 | MS.gene86720:CDS |
| TCGAACGGAACACTATGACA+AGG | 0.726605 | 3.4:-22659310 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAAATTGTCAATAATTTT+AGG | + | chr3.4:22656709-22656728 | MS.gene86720:intron | 10.0% |
| !!! | TTAAATTTTATATATATACC+TGG | - | chr3.4:22655966-22655985 | None:intergenic | 10.0% |
| !!! | TTTTAAAAAGTAAAAAATCA+TGG | + | chr3.4:22657633-22657652 | MS.gene86720:intron | 10.0% |
| !! | AACTAAATCTAATATAAAGT+TGG | - | chr3.4:22658325-22658344 | None:intergenic | 15.0% |
| !! | ACTAAATCTAATATAAAGTT+GGG | - | chr3.4:22658324-22658343 | None:intergenic | 15.0% |
| !! | TTCTATTTAAAGACATTAAA+CGG | + | chr3.4:22657393-22657412 | MS.gene86720:intron | 15.0% |
| !!! | AAAAAACATGTTTTCTAAAT+TGG | + | chr3.4:22659190-22659209 | MS.gene86720:intron | 15.0% |
| !!! | AAAAATCATGGATTAATATT+AGG | + | chr3.4:22657645-22657664 | MS.gene86720:intron | 15.0% |
| !!! | GATATATATTTTACTTCATT+CGG | - | chr3.4:22656979-22656998 | None:intergenic | 15.0% |
| !!! | TTGTTGTTCATATATATTAT+AGG | + | chr3.4:22656365-22656384 | MS.gene86720:intron | 15.0% |
| !!! | TTTATTTATGATTAGTTTGA+AGG | + | chr3.4:22655882-22655901 | MS.gene86720:intron | 15.0% |
| !! | AACTATTTATCCATAATAGA+AGG | + | chr3.4:22656542-22656561 | MS.gene86720:intron | 20.0% |
| !! | AATGTCTCTTATAAATAAGA+CGG | - | chr3.4:22656871-22656890 | None:intergenic | 20.0% |
| !! | AATTCAATAGAAAACAATCT+AGG | + | chr3.4:22657836-22657855 | MS.gene86720:CDS | 20.0% |
| !! | ATATATACCTGGATATTTAT+GGG | - | chr3.4:22655955-22655974 | None:intergenic | 20.0% |
| !! | ATCATCAACAACAAAATATA+GGG | - | chr3.4:22656686-22656705 | None:intergenic | 20.0% |
| !! | TATATATACCTGGATATTTA+TGG | - | chr3.4:22655956-22655975 | None:intergenic | 20.0% |
| !! | TATGGTTTATAAACATTTCT+AGG | + | chr3.4:22657670-22657689 | MS.gene86720:intron | 20.0% |
| !!! | AAAATAAATCAAAAAGTGTG+AGG | - | chr3.4:22657590-22657609 | None:intergenic | 20.0% |
| !!! | AAATAAATCAAAAAGTGTGA+GGG | - | chr3.4:22657589-22657608 | None:intergenic | 20.0% |
| !!! | AATTTTAGGTATAAAACCAT+TGG | + | chr3.4:22656723-22656742 | MS.gene86720:intron | 20.0% |
| !!! | ATTGGTTCATTTGATTTTAT+TGG | + | chr3.4:22657865-22657884 | MS.gene86720:CDS | 20.0% |
| !!! | CTCATTTTAAATCATCAAAT+TGG | - | chr3.4:22655672-22655691 | None:intergenic | 20.0% |
| !!! | GATTGTTTTCTATTGAATTT+TGG | - | chr3.4:22657835-22657854 | None:intergenic | 20.0% |
| !!! | GTAATATTGATTTTGTGTTT+AGG | + | chr3.4:22656321-22656340 | MS.gene86720:intron | 20.0% |
| !!! | GTTATTGATTGAAAAGTTAA+AGG | + | chr3.4:22659115-22659134 | MS.gene86720:intron | 20.0% |
| !!! | TAACTTTTCAATCAATAACT+AGG | - | chr3.4:22659114-22659133 | None:intergenic | 20.0% |
| !!! | TTCATTATTTTGTTCTAAAG+AGG | + | chr3.4:22658880-22658899 | MS.gene86720:intron | 20.0% |
| !!! | TTGATTCAATTTTAGAATCA+AGG | + | chr3.4:22658970-22658989 | MS.gene86720:intron | 20.0% |
| ! | AAAAGTCTAACAATTGTTTG+AGG | - | chr3.4:22657320-22657339 | None:intergenic | 25.0% |
| ! | AATTGGAGTAATTAATTACC+TGG | - | chr3.4:22655655-22655674 | None:intergenic | 25.0% |
| ! | AGTAGATAATTTATCGACAA+CGG | + | chr3.4:22657359-22657378 | MS.gene86720:intron | 25.0% |
| ! | ATGTCTCTTATAAATAAGAC+GGG | - | chr3.4:22656870-22656889 | None:intergenic | 25.0% |
| ! | GATAATATAGATGACGATAA+TGG | - | chr3.4:22658504-22658523 | None:intergenic | 25.0% |
| ! | GATCATCAACAACAAAATAT+AGG | - | chr3.4:22656687-22656706 | None:intergenic | 25.0% |
| ! | TAATTTCATCAACGAGTTAT+TGG | + | chr3.4:22656610-22656629 | MS.gene86720:CDS | 25.0% |
| ! | TAGAACATCGTTAAATTGAT+TGG | - | chr3.4:22658585-22658604 | None:intergenic | 25.0% |
| ! | TATTTATATGTTACATGTGC+AGG | + | chr3.4:22657432-22657451 | MS.gene86720:intron | 25.0% |
| ! | TCAACAAAAATTGATGTATC+TGG | - | chr3.4:22656932-22656951 | None:intergenic | 25.0% |
| ! | TGATGTATCTGGTTAAAAAT+TGG | - | chr3.4:22656921-22656940 | None:intergenic | 25.0% |
| ! | TGCATTACACTTATATCTAA+GGG | + | chr3.4:22656241-22656260 | MS.gene86720:intron | 25.0% |
| ! | TTATCATCATGAAACTTACT+TGG | - | chr3.4:22656462-22656481 | None:intergenic | 25.0% |
| ! | TTGAAAAGTTAAAGGATACA+AGG | + | chr3.4:22659123-22659142 | MS.gene86720:intron | 25.0% |
| ! | TTGATTTACATCACTGAAAA+TGG | + | chr3.4:22658290-22658309 | MS.gene86720:CDS | 25.0% |
| !! | ACATTTGTGGATTACAATAA+TGG | + | chr3.4:22658718-22658737 | MS.gene86720:CDS | 25.0% |
| !! | ATCAAAAGTTGATTGATTAC+AGG | + | chr3.4:22657743-22657762 | MS.gene86720:intron | 25.0% |
| !! | ATGGATTAATATTAGGACTA+TGG | + | chr3.4:22657652-22657671 | MS.gene86720:intron | 25.0% |
| !! | GTCATATATTTTTCGTGATA+TGG | + | chr3.4:22657692-22657711 | MS.gene86720:intron | 25.0% |
| !! | TTGCATATCTTTTCTATTTG+TGG | + | chr3.4:22658056-22658075 | MS.gene86720:intron | 25.0% |
| !! | TTTTCAGTGATGTAAATCAA+CGG | - | chr3.4:22658290-22658309 | None:intergenic | 25.0% |
| !!! | TGGAAATCTTTTCTGAAAAA+TGG | - | chr3.4:22657026-22657045 | None:intergenic | 25.0% |
| AAATGTCATTCCAAATCTCA+CGG | - | chr3.4:22658704-22658723 | None:intergenic | 30.0% | |
| AATCATCAAGGATATGAACT+TGG | + | chr3.4:22656398-22656417 | MS.gene86720:CDS | 30.0% | |
| ACTATGCTTTCCTTCTATTA+TGG | - | chr3.4:22656555-22656574 | None:intergenic | 30.0% | |
| CCATTCAAAATTGTTGAACA+AGG | - | chr3.4:22658668-22658687 | None:intergenic | 30.0% | |
| CTCCAAATATAAATCCTTTG+GGG | - | chr3.4:22655616-22655635 | None:intergenic | 30.0% | |
| CTGTCATACATAAAGGAAAA+TGG | - | chr3.4:22658610-22658629 | None:intergenic | 30.0% | |
| GCTCCAAATATAAATCCTTT+GGG | - | chr3.4:22655617-22655636 | None:intergenic | 30.0% | |
| GTAATTAATTACCTGGTATG+AGG | - | chr3.4:22655648-22655667 | None:intergenic | 30.0% | |
| GTAGTTGTGATATGAATCAA+TGG | - | chr3.4:22656120-22656139 | None:intergenic | 30.0% | |
| GTGCATTACACTTATATCTA+AGG | + | chr3.4:22656240-22656259 | MS.gene86720:intron | 30.0% | |
| GTTGATTGATTACAGGTTTA+TGG | + | chr3.4:22657750-22657769 | MS.gene86720:intron | 30.0% | |
| TAGTAAGAGAACTCATAGAA+TGG | - | chr3.4:22658004-22658023 | None:intergenic | 30.0% | |
| TAGTCTCTTACATCTCTAAA+AGG | + | chr3.4:22658545-22658564 | MS.gene86720:intron | 30.0% | |
| TGATTCATATCACAACTACA+AGG | + | chr3.4:22656121-22656140 | MS.gene86720:CDS | 30.0% | |
| TGCTCCAAATATAAATCCTT+TGG | - | chr3.4:22655618-22655637 | None:intergenic | 30.0% | |
| TGGTGATAGAGTGAAATATT+GGG | + | chr3.4:22657076-22657095 | MS.gene86720:CDS | 30.0% | |
| TTCCCCAAAGGATTTATATT+TGG | + | chr3.4:22655611-22655630 | MS.gene86720:CDS | 30.0% | |
| TTTCAGTGATGTAAATCAAC+GGG | - | chr3.4:22658289-22658308 | None:intergenic | 30.0% | |
| ! | AAAGGATTTATATTTGGAGC+AGG | + | chr3.4:22655617-22655636 | MS.gene86720:CDS | 30.0% |
| ! | ATAATAGAAGGAAAGCATAG+TGG | + | chr3.4:22656554-22656573 | MS.gene86720:intron | 30.0% |
| ! | CATTTTCCTTTATGTATGAC+AGG | + | chr3.4:22658608-22658627 | MS.gene86720:intron | 30.0% |
| ! | CCTTGTTCAACAATTTTGAA+TGG | + | chr3.4:22658665-22658684 | MS.gene86720:CDS | 30.0% |
| ! | GAAATTAGTTTCTTACATGC+AGG | - | chr3.4:22657979-22657998 | None:intergenic | 30.0% |
| ! | TTGGTGATAGAGTGAAATAT+TGG | + | chr3.4:22657075-22657094 | MS.gene86720:CDS | 30.0% |
| ! | TTTCTTTAACTTTCGTACGA+TGG | - | chr3.4:22659072-22659091 | None:intergenic | 30.0% |
| !! | ACTCATCTTCTAAAACTTGT+GGG | - | chr3.4:22656771-22656790 | None:intergenic | 30.0% |
| !! | ATTGGTGACTCTTTTTCATT+GGG | + | chr3.4:22656741-22656760 | MS.gene86720:CDS | 30.0% |
| !! | GAACTTTGCTTTAAGGAATT+TGG | + | chr3.4:22657056-22657075 | MS.gene86720:CDS | 30.0% |
| !! | TACTCATCTTCTAAAACTTG+TGG | - | chr3.4:22656772-22656791 | None:intergenic | 30.0% |
| !! | TCCATTTTTCATTCCCTTTT+CGG | - | chr3.4:22658916-22658935 | None:intergenic | 30.0% |
| !! | TGATCTTTTGTTATACACCA+AGG | + | chr3.4:22658250-22658269 | MS.gene86720:CDS | 30.0% |
| !!! | CAAGTTTTAGAAGATGAGTA+TGG | + | chr3.4:22656772-22656791 | MS.gene86720:CDS | 30.0% |
| AAAAGATCACGAATTCCTCT+TGG | - | chr3.4:22658239-22658258 | None:intergenic | 35.0% | |
| AAACAATCTAGGCTACTCAT+TGG | + | chr3.4:22657847-22657866 | MS.gene86720:CDS | 35.0% | |
| AAAGAATCTGTCAAGTAGCT+AGG | - | chr3.4:22657949-22657968 | None:intergenic | 35.0% | |
| AATGAAGCAACATCAAGAAG+TGG | - | chr3.4:22655578-22655597 | None:intergenic | 35.0% | |
| ACCGAAAAGGGAATGAAAAA+TGG | + | chr3.4:22658912-22658931 | MS.gene86720:intron | 35.0% | |
| ACGTCCAAGGATATTACATA+TGG | + | chr3.4:22658641-22658660 | MS.gene86720:CDS | 35.0% | |
| ACTTTCACCCATAAATATCC+AGG | + | chr3.4:22655945-22655964 | MS.gene86720:CDS | 35.0% | |
| AGGACCATATGTAATATCCT+TGG | - | chr3.4:22658648-22658667 | None:intergenic | 35.0% | |
| AGTCAAAATGGCTATGCAAA+TGG | + | chr3.4:22657125-22657144 | MS.gene86720:CDS | 35.0% | |
| CAATATTCTAGACCAGGATA+AGG | - | chr3.4:22656439-22656458 | None:intergenic | 35.0% | |
| CAATGAAAAAGAGTCACCAA+TGG | - | chr3.4:22656742-22656761 | None:intergenic | 35.0% | |
| CAGCAAAATCGTTAGAAGAA+AGG | - | chr3.4:22658138-22658157 | None:intergenic | 35.0% | |
| CTATGCTGAACTTTGCTTTA+AGG | + | chr3.4:22657049-22657068 | MS.gene86720:CDS | 35.0% | |
| CTCTTATAAATAAGACGGGA+GGG | - | chr3.4:22656866-22656885 | None:intergenic | 35.0% | |
| CTTTGTCTTGTACACATTGA+CGG | - | chr3.4:22657264-22657283 | None:intergenic | 35.0% | |
| GGAAGATGTTAGAATCATCA+AGG | + | chr3.4:22656386-22656405 | MS.gene86720:intron | 35.0% | |
| TAATTGCAGTTGAGCGAAAT+GGG | + | chr3.4:22658080-22658099 | MS.gene86720:intron | 35.0% | |
| TAGAAACTCACACTATGAGA+GGG | - | chr3.4:22656810-22656829 | None:intergenic | 35.0% | |
| TAGCTACTTGACAGATTCTT+TGG | + | chr3.4:22657948-22657967 | MS.gene86720:CDS | 35.0% | |
| TCTCTTATAAATAAGACGGG+AGG | - | chr3.4:22656867-22656886 | None:intergenic | 35.0% | |
| TGACGTACCTTAATACCAAT+AGG | - | chr3.4:22658109-22658128 | None:intergenic | 35.0% | |
| TGGGAAACCTATTGGTATTA+AGG | + | chr3.4:22658099-22658118 | MS.gene86720:CDS | 35.0% | |
| TGGTAGAACACCAAGTATAT+GGG | + | chr3.4:22655920-22655939 | MS.gene86720:CDS | 35.0% | |
| TGGTTGTATGTTTATCCAAG+AGG | + | chr3.4:22658221-22658240 | MS.gene86720:CDS | 35.0% | |
| TTAATTGCAGTTGAGCGAAA+TGG | + | chr3.4:22658079-22658098 | MS.gene86720:intron | 35.0% | |
| TTAGAAACTCACACTATGAG+AGG | - | chr3.4:22656811-22656830 | None:intergenic | 35.0% | |
| TTATGCAGATTGCTTCTGAT+TGG | + | chr3.4:22658201-22658220 | MS.gene86720:intron | 35.0% | |
| TTTATGGATCCATTGACAAC+AGG | + | chr3.4:22657766-22657785 | MS.gene86720:CDS | 35.0% | |
| ! | AACAATTTTGAATGGTGCTC+GGG | + | chr3.4:22658673-22658692 | MS.gene86720:CDS | 35.0% |
| ! | AGCAGCTTTTTGATCAGATT+TGG | - | chr3.4:22657521-22657540 | None:intergenic | 35.0% |
| ! | ATCAACGAGTTATTGGCTAA+TGG | + | chr3.4:22656617-22656636 | MS.gene86720:CDS | 35.0% |
| ! | CAACAATTTTGAATGGTGCT+CGG | + | chr3.4:22658672-22658691 | MS.gene86720:CDS | 35.0% |
| ! | CTTTCTTCTAACGATTTTGC+TGG | + | chr3.4:22658136-22658155 | MS.gene86720:intron | 35.0% |
| ! | GAAACTCAAAAGGGTGTAAT+AGG | + | chr3.4:22657454-22657473 | MS.gene86720:CDS | 35.0% |
| ! | GAGATTTGGAATGACATTTG+TGG | + | chr3.4:22658705-22658724 | MS.gene86720:CDS | 35.0% |
| ! | TGTGTACAAGACAAAGTATC+AGG | + | chr3.4:22657268-22657287 | MS.gene86720:CDS | 35.0% |
| !! | AGAGCTGTTGATTTCATGTA+TGG | + | chr3.4:22657544-22657563 | MS.gene86720:CDS | 35.0% |
| !! | CATTGGTGACTCTTTTTCAT+TGG | + | chr3.4:22656740-22656759 | MS.gene86720:CDS | 35.0% |
| !! | CTGTTGATTTCATGTATGGA+TGG | + | chr3.4:22657548-22657567 | MS.gene86720:CDS | 35.0% |
| !! | GTGAAAGTATCCCATATACT+TGG | - | chr3.4:22655933-22655952 | None:intergenic | 35.0% |
| !!! | GTTTTAGAAGATGAGTATGG+TGG | + | chr3.4:22656775-22656794 | MS.gene86720:CDS | 35.0% |
| AAACAATACTCCCCTCATGT+TGG | + | chr3.4:22659279-22659298 | MS.gene86720:intron | 40.0% | |
| AAGGTATACCTTCCAACATG+AGG | - | chr3.4:22659294-22659313 | None:intergenic | 40.0% | |
| ACATGTGCAGGAAACTCAAA+AGG | + | chr3.4:22657444-22657463 | MS.gene86720:intron | 40.0% | |
| ACCTTGCCTGTCATACATAA+AGG | - | chr3.4:22658617-22658636 | None:intergenic | 40.0% | |
| ACGAGAAACTTTCTGCATTG+TGG | + | chr3.4:22658752-22658771 | MS.gene86720:CDS | 40.0% | |
| ACTTGGCAATATTCTAGACC+AGG | - | chr3.4:22656445-22656464 | None:intergenic | 40.0% | |
| AGCAAAGTTCAGCATAGTCT+TGG | - | chr3.4:22657046-22657065 | None:intergenic | 40.0% | |
| AGGTATACCTTCCAACATGA+GGG | - | chr3.4:22659293-22659312 | None:intergenic | 40.0% | |
| AGGTCCTATTCAACCGAAAA+GGG | + | chr3.4:22658900-22658919 | MS.gene86720:intron | 40.0% | |
| AGTAGAAACAGTTTCCCCAA+AGG | + | chr3.4:22655599-22655618 | MS.gene86720:CDS | 40.0% | |
| AGTGGTGGCATAAATCAAGA+AGG | + | chr3.4:22656572-22656591 | MS.gene86720:CDS | 40.0% | |
| CAAAAGCAATTAGGCAGAGA+AGG | - | chr3.4:22655502-22655521 | None:intergenic | 40.0% | |
| CATACAGATTCTCCTTATCC+TGG | + | chr3.4:22656424-22656443 | MS.gene86720:CDS | 40.0% | |
| CATGTGCAGGAAACTCAAAA+GGG | + | chr3.4:22657445-22657464 | MS.gene86720:intron | 40.0% | |
| CCATGGAGTTACAGTCAAAA+TGG | + | chr3.4:22657113-22657132 | MS.gene86720:CDS | 40.0% | |
| GACGTGCATACTTCACTTAT+AGG | + | chr3.4:22658409-22658428 | MS.gene86720:intron | 40.0% | |
| GCACAAGTGCAAAAGCAATT+AGG | - | chr3.4:22655511-22655530 | None:intergenic | 40.0% | |
| GGATAATCTCCTGTTGTCAA+TGG | - | chr3.4:22657778-22657797 | None:intergenic | 40.0% | |
| GGGTGTAATAGGTATAACCT+TGG | + | chr3.4:22657465-22657484 | MS.gene86720:CDS | 40.0% | |
| GGTCTAGCATTGCTTAGAAA+TGG | - | chr3.4:22657928-22657947 | None:intergenic | 40.0% | |
| GTACAGTGATCCTACACTAT+CGG | + | chr3.4:22658441-22658460 | MS.gene86720:CDS | 40.0% | |
| GTGGTAGAACACCAAGTATA+TGG | + | chr3.4:22655919-22655938 | MS.gene86720:CDS | 40.0% | |
| TCCTTTATGTATGACAGGCA+AGG | + | chr3.4:22658613-22658632 | MS.gene86720:intron | 40.0% | |
| TGATGTATCCTATGACGATG+AGG | + | chr3.4:22659346-22659365 | MS.gene86720:CDS | 40.0% | |
| TGGTAATCTTGCTCCAACAA+GGG | - | chr3.4:22657815-22657834 | None:intergenic | 40.0% | |
| TGGTTGAATCCAAATTGCAC+CGG | + | chr3.4:22657176-22657195 | MS.gene86720:CDS | 40.0% | |
| ! | AAAAGCATGAGATCCCTTGT+TGG | + | chr3.4:22657799-22657818 | MS.gene86720:CDS | 40.0% |
| ! | ACAAGGGATCTCATGCTTTT+AGG | - | chr3.4:22657799-22657818 | None:intergenic | 40.0% |
| ! | ATAGAAGGAAAGCATAGTGG+TGG | + | chr3.4:22656557-22656576 | MS.gene86720:intron | 40.0% |
| ! | CACATGTTGAAGTACTCGAA+CGG | - | chr3.4:22659328-22659347 | None:intergenic | 40.0% |
| ! | CATTCCCTTTTCGGTTGAAT+AGG | - | chr3.4:22658907-22658926 | None:intergenic | 40.0% |
| ! | CGGGTTATTGTACTTTTCCT+TGG | - | chr3.4:22658270-22658289 | None:intergenic | 40.0% |
| ! | GGGTTACTTTGAATGAACCA+TGG | + | chr3.4:22657096-22657115 | MS.gene86720:CDS | 40.0% |
| ! | GTATAACCTTGGTAGCTAAC+TGG | + | chr3.4:22657476-22657495 | MS.gene86720:CDS | 40.0% |
| ! | TCAGATTTGGAATCTGAGAG+TGG | - | chr3.4:22657508-22657527 | None:intergenic | 40.0% |
| ! | TGGTAGTGCGTGACAATATA+GGG | - | chr3.4:22657221-22657240 | None:intergenic | 40.0% |
| ! | TTGGTAATCTTGCTCCAACA+AGG | - | chr3.4:22657816-22657835 | None:intergenic | 40.0% |
| ! | TTTGAAGGTGCAGCAAATGA+AGG | + | chr3.4:22655897-22655916 | MS.gene86720:CDS | 40.0% |
| !! | TTGGTAGTGCGTGACAATAT+AGG | - | chr3.4:22657222-22657241 | None:intergenic | 40.0% |
| !!! | CCATTTTGACTGTAACTCCA+TGG | - | chr3.4:22657116-22657135 | None:intergenic | 40.0% |
| AACCAACTAGAACAACGACC+TGG | - | chr3.4:22657161-22657180 | None:intergenic | 45.0% | |
| AAGTGTCCATGAGCGATTCT+TGG | - | chr3.4:22658468-22658487 | None:intergenic | 45.0% | |
| AATACTCCCCTCATGTTGGA+AGG | + | chr3.4:22659283-22659302 | MS.gene86720:intron | 45.0% | |
| CAAGTACCAGTTAGCTACCA+AGG | - | chr3.4:22657485-22657504 | None:intergenic | 45.0% | |
| CTTGTACACATTGACGGCTT+TGG | - | chr3.4:22657258-22657277 | None:intergenic | 45.0% | |
| CTTTGGCATGAGCTAGAAGT+TGG | - | chr3.4:22657241-22657260 | None:intergenic | 45.0% | |
| GACAATATAGGGCTCAATCG+CGG | - | chr3.4:22657210-22657229 | None:intergenic | 45.0% | |
| GAGCGAAATGGGAAACCTAT+TGG | + | chr3.4:22658091-22658110 | MS.gene86720:CDS | 45.0% | |
| GAGGTCCTATTCAACCGAAA+AGG | + | chr3.4:22658899-22658918 | MS.gene86720:intron | 45.0% | |
| GATTCTTGGACCGATAGTGT+AGG | - | chr3.4:22658454-22658473 | None:intergenic | 45.0% | |
| GGTATACCTTCCAACATGAG+GGG | - | chr3.4:22659292-22659311 | None:intergenic | 45.0% | |
| TCGAACGGAACACTATGACA+AGG | - | chr3.4:22659313-22659332 | None:intergenic | 45.0% | |
| TCGGGTTATTCCGTGAGATT+TGG | + | chr3.4:22658691-22658710 | MS.gene86720:CDS | 45.0% | |
| TGGCTATGCAAATGGACGAA+TGG | + | chr3.4:22657133-22657152 | MS.gene86720:CDS | 45.0% | |
| TTGAATCCAAATTGCACCGG+TGG | + | chr3.4:22657179-22657198 | MS.gene86720:CDS | 45.0% | |
| AGCAGGATCTTCCTCATACC+AGG | + | chr3.4:22655634-22655653 | MS.gene86720:CDS | 50.0% | |
| ATCGGTCCAAGAATCGCTCA+TGG | + | chr3.4:22658459-22658478 | MS.gene86720:CDS | 50.0% | |
| CACCAGGTCGTTGTTCTAGT+TGG | + | chr3.4:22657156-22657175 | MS.gene86720:CDS | 50.0% | |
| CTAGGCAACCTCATCGTCAT+AGG | - | chr3.4:22659357-22659376 | None:intergenic | 50.0% | |
| GAATCACCACCGGTGCAATT+TGG | - | chr3.4:22657188-22657207 | None:intergenic | 50.0% | |
| ! | GAAGGTGCAGCAAATGAAGG+TGG | + | chr3.4:22655900-22655919 | MS.gene86720:CDS | 50.0% |
| AGGCAAGGTGCAAACGTCCA+AGG | + | chr3.4:22658628-22658647 | MS.gene86720:intron | 55.0% | |
| CTCAATCGCGGAATCACCAC+CGG | - | chr3.4:22657198-22657217 | None:intergenic | 55.0% | |
| GCAAATGGACGAATGGCACC+AGG | + | chr3.4:22657140-22657159 | MS.gene86720:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 22655485 | 22659376 | 22655485 | ID=MS.gene86720 |
| chr3.4 | mRNA | 22655485 | 22659376 | 22655485 | ID=MS.gene86720.t1;Parent=MS.gene86720 |
| chr3.4 | exon | 22655485 | 22655655 | 22655485 | ID=MS.gene86720.t1.exon1;Parent=MS.gene86720.t1 |
| chr3.4 | CDS | 22655485 | 22655655 | 22655485 | ID=cds.MS.gene86720.t1;Parent=MS.gene86720.t1 |
| chr3.4 | exon | 22655897 | 22655966 | 22655897 | ID=MS.gene86720.t1.exon2;Parent=MS.gene86720.t1 |
| chr3.4 | CDS | 22655897 | 22655966 | 22655897 | ID=cds.MS.gene86720.t1;Parent=MS.gene86720.t1 |
| chr3.4 | exon | 22656084 | 22656142 | 22656084 | ID=MS.gene86720.t1.exon3;Parent=MS.gene86720.t1 |
| chr3.4 | CDS | 22656084 | 22656142 | 22656084 | ID=cds.MS.gene86720.t1;Parent=MS.gene86720.t1 |
| chr3.4 | exon | 22656387 | 22656462 | 22656387 | ID=MS.gene86720.t1.exon4;Parent=MS.gene86720.t1 |
| chr3.4 | CDS | 22656387 | 22656462 | 22656387 | ID=cds.MS.gene86720.t1;Parent=MS.gene86720.t1 |
| chr3.4 | exon | 22656561 | 22656638 | 22656561 | ID=MS.gene86720.t1.exon5;Parent=MS.gene86720.t1 |
| chr3.4 | CDS | 22656561 | 22656638 | 22656561 | ID=cds.MS.gene86720.t1;Parent=MS.gene86720.t1 |
| chr3.4 | exon | 22656731 | 22656818 | 22656731 | ID=MS.gene86720.t1.exon6;Parent=MS.gene86720.t1 |
| chr3.4 | CDS | 22656731 | 22656818 | 22656731 | ID=cds.MS.gene86720.t1;Parent=MS.gene86720.t1 |
| chr3.4 | exon | 22657034 | 22657289 | 22657034 | ID=MS.gene86720.t1.exon7;Parent=MS.gene86720.t1 |
| chr3.4 | CDS | 22657034 | 22657289 | 22657034 | ID=cds.MS.gene86720.t1;Parent=MS.gene86720.t1 |
| chr3.4 | exon | 22657454 | 22657569 | 22657454 | ID=MS.gene86720.t1.exon8;Parent=MS.gene86720.t1 |
| chr3.4 | CDS | 22657454 | 22657569 | 22657454 | ID=cds.MS.gene86720.t1;Parent=MS.gene86720.t1 |
| chr3.4 | exon | 22657765 | 22657982 | 22657765 | ID=MS.gene86720.t1.exon9;Parent=MS.gene86720.t1 |
| chr3.4 | CDS | 22657765 | 22657982 | 22657765 | ID=cds.MS.gene86720.t1;Parent=MS.gene86720.t1 |
| chr3.4 | exon | 22658089 | 22658120 | 22658089 | ID=MS.gene86720.t1.exon10;Parent=MS.gene86720.t1 |
| chr3.4 | CDS | 22658089 | 22658120 | 22658089 | ID=cds.MS.gene86720.t1;Parent=MS.gene86720.t1 |
| chr3.4 | exon | 22658209 | 22658311 | 22658209 | ID=MS.gene86720.t1.exon11;Parent=MS.gene86720.t1 |
| chr3.4 | CDS | 22658209 | 22658311 | 22658209 | ID=cds.MS.gene86720.t1;Parent=MS.gene86720.t1 |
| chr3.4 | exon | 22658431 | 22658539 | 22658431 | ID=MS.gene86720.t1.exon12;Parent=MS.gene86720.t1 |
| chr3.4 | CDS | 22658431 | 22658539 | 22658431 | ID=cds.MS.gene86720.t1;Parent=MS.gene86720.t1 |
| chr3.4 | exon | 22658630 | 22658816 | 22658630 | ID=MS.gene86720.t1.exon13;Parent=MS.gene86720.t1 |
| chr3.4 | CDS | 22658630 | 22658816 | 22658630 | ID=cds.MS.gene86720.t1;Parent=MS.gene86720.t1 |
| chr3.4 | exon | 22659305 | 22659376 | 22659305 | ID=MS.gene86720.t1.exon14;Parent=MS.gene86720.t1 |
| chr3.4 | CDS | 22659305 | 22659376 | 22659305 | ID=cds.MS.gene86720.t1;Parent=MS.gene86720.t1 |
| Gene Sequence |
| Protein sequence |
