Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015193.t1 | XP_003611674.1 | 100 | 250 | 0 | 0 | 1 | 250 | 1 | 250 | 1.10E-134 | 489.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015193.t1 | P52427 | 90.0 | 250 | 25 | 0 | 1 | 250 | 1 | 250 | 8.3e-126 | 451.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015193.t1 | G7K595 | 100.0 | 250 | 0 | 0 | 1 | 250 | 1 | 250 | 8.3e-135 | 489.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015193.t1 | MTR_5g016590 | 100.000 | 250 | 0 | 0 | 1 | 250 | 1 | 250 | 0.0 | 518 |
MS.gene015193.t1 | MTR_7g070070 | 98.000 | 250 | 5 | 0 | 1 | 250 | 1 | 250 | 0.0 | 509 |
MS.gene015193.t1 | MTR_1g112250 | 42.324 | 241 | 121 | 7 | 5 | 239 | 8 | 236 | 6.23e-59 | 187 |
MS.gene015193.t1 | MTR_8g075320 | 42.500 | 200 | 112 | 3 | 4 | 202 | 3 | 200 | 4.37e-53 | 172 |
MS.gene015193.t1 | MTR_2g016050 | 41.500 | 200 | 114 | 3 | 4 | 202 | 3 | 200 | 9.18e-51 | 166 |
MS.gene015193.t1 | MTR_0167s0060 | 36.325 | 234 | 142 | 4 | 4 | 237 | 5 | 231 | 4.41e-48 | 159 |
MS.gene015193.t1 | MTR_1g022410 | 38.785 | 214 | 125 | 3 | 4 | 215 | 5 | 214 | 3.24e-43 | 148 |
MS.gene015193.t1 | MTR_8g464460 | 41.709 | 199 | 112 | 3 | 5 | 200 | 9 | 206 | 3.24e-43 | 147 |
MS.gene015193.t1 | MTR_2g060830 | 36.975 | 238 | 138 | 6 | 5 | 237 | 9 | 239 | 1.19e-40 | 140 |
MS.gene015193.t1 | MTR_6g024135 | 35.071 | 211 | 135 | 2 | 5 | 215 | 8 | 216 | 2.11e-37 | 132 |
MS.gene015193.t1 | MTR_4g012740 | 28.968 | 252 | 135 | 6 | 4 | 215 | 236 | 483 | 6.44e-22 | 94.7 |
MS.gene015193.t1 | MTR_6g013300 | 32.821 | 195 | 112 | 8 | 33 | 220 | 138 | 320 | 1.09e-16 | 78.6 |
MS.gene015193.t1 | MTR_4g057090 | 29.947 | 187 | 119 | 5 | 26 | 207 | 110 | 289 | 3.14e-14 | 71.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015193.t1 | AT3G22110 | 90.400 | 250 | 24 | 0 | 1 | 250 | 1 | 250 | 3.64e-173 | 477 |
MS.gene015193.t1 | AT4G15165 | 72.000 | 250 | 28 | 1 | 1 | 250 | 1 | 208 | 3.76e-127 | 359 |
MS.gene015193.t1 | AT3G14290 | 42.149 | 242 | 122 | 7 | 4 | 239 | 7 | 236 | 1.83e-59 | 188 |
MS.gene015193.t1 | AT1G53850 | 41.322 | 242 | 124 | 7 | 4 | 239 | 7 | 236 | 1.17e-58 | 186 |
MS.gene015193.t1 | AT1G53850 | 41.322 | 242 | 124 | 7 | 4 | 239 | 7 | 236 | 1.17e-58 | 186 |
MS.gene015193.t1 | AT5G66140 | 42.000 | 200 | 113 | 3 | 4 | 202 | 3 | 200 | 1.78e-52 | 171 |
MS.gene015193.t1 | AT3G51260 | 42.500 | 200 | 112 | 3 | 4 | 202 | 3 | 200 | 2.12e-52 | 171 |
MS.gene015193.t1 | AT3G51260 | 42.500 | 200 | 112 | 3 | 4 | 202 | 3 | 200 | 2.31e-52 | 170 |
MS.gene015193.t1 | AT1G16470 | 37.264 | 212 | 130 | 3 | 4 | 215 | 5 | 213 | 1.32e-46 | 155 |
MS.gene015193.t1 | AT1G16470 | 37.264 | 212 | 130 | 3 | 4 | 215 | 5 | 213 | 1.32e-46 | 155 |
MS.gene015193.t1 | AT1G79210 | 37.264 | 212 | 130 | 3 | 4 | 215 | 5 | 213 | 1.56e-46 | 155 |
MS.gene015193.t1 | AT1G79210 | 37.264 | 212 | 130 | 3 | 4 | 215 | 5 | 213 | 1.56e-46 | 155 |
MS.gene015193.t1 | AT1G79210 | 37.264 | 212 | 130 | 3 | 4 | 215 | 5 | 213 | 1.56e-46 | 155 |
MS.gene015193.t1 | AT5G42790 | 39.320 | 206 | 119 | 3 | 4 | 207 | 5 | 206 | 5.65e-44 | 150 |
MS.gene015193.t1 | AT1G47250 | 38.350 | 206 | 121 | 3 | 4 | 207 | 5 | 206 | 3.06e-43 | 148 |
MS.gene015193.t1 | AT5G35590 | 40.201 | 199 | 115 | 3 | 5 | 200 | 9 | 206 | 2.10e-41 | 142 |
MS.gene015193.t1 | AT2G05840 | 37.688 | 199 | 120 | 3 | 5 | 200 | 9 | 206 | 5.22e-38 | 132 |
MS.gene015193.t1 | AT2G05840 | 37.688 | 199 | 120 | 3 | 5 | 200 | 9 | 206 | 5.93e-38 | 133 |
MS.gene015193.t1 | AT2G05840 | 37.745 | 204 | 116 | 4 | 5 | 205 | 9 | 204 | 3.34e-37 | 130 |
MS.gene015193.t1 | AT2G27020 | 32.314 | 229 | 150 | 4 | 5 | 233 | 8 | 231 | 2.77e-36 | 129 |
MS.gene015193.t1 | AT2G27020 | 32.314 | 229 | 150 | 4 | 5 | 233 | 110 | 333 | 3.24e-35 | 129 |
Find 73 sgRNAs with CRISPR-Local
Find 77 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAGTCTCTTTCCTGTTTGC+AGG | 0.211747 | 5.2:+8323416 | MS.gene015193:CDS |
CTCTTTCCTGTTTGCAGGAT+GGG | 0.248276 | 5.2:+8323421 | MS.gene015193:CDS |
ACTAAGCTGTTGGTGAAGTC+TGG | 0.280754 | 5.2:+8323725 | MS.gene015193:CDS |
CATGTTGCATGTGCTGTTGC+TGG | 0.302104 | 5.2:+8323236 | MS.gene015193:CDS |
AAGCAAGGTTACACACAATT+TGG | 0.305332 | 5.2:+8323377 | MS.gene015193:CDS |
GGATCCTAGCAGTGTTGATT+AGG | 0.325400 | 5.2:-8323280 | None:intergenic |
GTCGAAGGATGGGGTTGTTC+TGG | 0.338789 | 5.2:+8323139 | MS.gene015193:CDS |
AGCAGTCTCTGTTGCTGGTT+GGG | 0.364107 | 5.2:-8323753 | None:intergenic |
AGCGATCCTAGTGGAAATTA+TGG | 0.367986 | 5.2:+8323473 | MS.gene015193:CDS |
GAAAGTTCTGAGCAAAACTA+TGG | 0.379385 | 5.2:+8323604 | MS.gene015193:CDS |
AACAGCTTAGTCAAGTTCTC+TGG | 0.381164 | 5.2:-8323713 | None:intergenic |
AGCTAAGCAGTCTCTGTTGC+TGG | 0.412030 | 5.2:-8323758 | None:intergenic |
TTTGGTGGTCTCCGTCCGTT+TGG | 0.423167 | 5.2:+8323395 | MS.gene015193:CDS |
GGTTGGAAAGCCGGTGCTAT+TGG | 0.431124 | 5.2:+8323497 | MS.gene015193:CDS |
TGATTGTGCTGCCTGGTTGT+TGG | 0.432231 | 5.2:-8323522 | None:intergenic |
AGCACAATCAATTCTAAAAC+AGG | 0.435611 | 5.2:+8323535 | MS.gene015193:CDS |
GATTGAACCAACTGTTCAAC+AGG | 0.438880 | 5.2:-8323341 | None:intergenic |
GTTCAACAGGCATTGGCTCT+TGG | 0.441840 | 5.2:-8323328 | None:intergenic |
CTAAGCTGTTGGTGAAGTCT+GGG | 0.453484 | 5.2:+8323726 | MS.gene015193:CDS |
TCTCTTTCCTGTTTGCAGGA+TGG | 0.460327 | 5.2:+8323420 | MS.gene015193:CDS |
AAGCAGTCTCTGTTGCTGGT+TGG | 0.471981 | 5.2:-8323754 | None:intergenic |
ATGTTGCATGTGCTGTTGCT+GGG | 0.490338 | 5.2:+8323237 | MS.gene015193:CDS |
TGTTCTGGTTGGCGAAAAGA+AGG | 0.492197 | 5.2:+8323154 | MS.gene015193:CDS |
AATTATGGCGGTTGGAAAGC+CGG | 0.495351 | 5.2:+8323488 | MS.gene015193:CDS |
TGCTCAGAACTTTCAGTGCA+AGG | 0.496408 | 5.2:-8323595 | None:intergenic |
ACAGCTTAGTCAAGTTCTCT+GGG | 0.496829 | 5.2:-8323712 | None:intergenic |
AGCAGTGTTGATTAGGATGT+TGG | 0.496912 | 5.2:-8323273 | None:intergenic |
GCCAATGCCTGTTGAACAGT+TGG | 0.499789 | 5.2:+8323334 | MS.gene015193:CDS |
TTAGAATTGATTGTGCTGCC+TGG | 0.504956 | 5.2:-8323529 | None:intergenic |
AAGCTTATCCGAGGTAAGAC+TGG | 0.507716 | 5.2:-8323633 | None:intergenic |
TGTTGAGGTTTGCAGAAGCT+TGG | 0.509366 | 5.2:-8323183 | None:intergenic |
ACTTGGTAAAGACGTCCTTC+AGG | 0.509793 | 5.2:-8323065 | None:intergenic |
TAGGAATCTTGTCGAAGGAT+GGG | 0.512721 | 5.2:+8323129 | MS.gene015193:CDS |
CAAATGAGTAACGTTGTGCT+TGG | 0.513670 | 5.2:-8323301 | None:intergenic |
CAACCGCCATAATTTCCACT+AGG | 0.518150 | 5.2:-8323479 | None:intergenic |
AAGGATGGGGTTGTTCTGGT+TGG | 0.521102 | 5.2:+8323143 | MS.gene015193:CDS |
ACCAACTGTTCAACAGGCAT+TGG | 0.523493 | 5.2:-8323335 | None:intergenic |
GGAAATGCTGGTACTGCCAT+AGG | 0.528749 | 5.2:+8323110 | MS.gene015193:CDS |
CTAGTGGAAATTATGGCGGT+TGG | 0.531106 | 5.2:+8323480 | MS.gene015193:CDS |
ATAGGAATCTTGTCGAAGGA+TGG | 0.537221 | 5.2:+8323128 | MS.gene015193:CDS |
TGCTATTGGTGCCAACAACC+AGG | 0.540083 | 5.2:+8323511 | MS.gene015193:CDS |
ATCCTTCGACAAGATTCCTA+TGG | 0.544761 | 5.2:-8323126 | None:intergenic |
ATGGAGGCCATTGGAAATGC+TGG | 0.546199 | 5.2:+8323098 | MS.gene015193:CDS |
AAATTGTGTGTAACCTTGCT+TGG | 0.550671 | 5.2:-8323375 | None:intergenic |
CCTCCATTGCATACTCCACT+TGG | 0.550938 | 5.2:-8323082 | None:intergenic |
AATTCTAAAACAGGACTACA+AGG | 0.553479 | 5.2:+8323544 | MS.gene015193:CDS |
AGGAATCTTGTCGAAGGATG+GGG | 0.558136 | 5.2:+8323130 | MS.gene015193:CDS |
ACATCCTAATCAACACTGCT+AGG | 0.565540 | 5.2:+8323276 | MS.gene015193:CDS |
CAAGGTTACACACAATTTGG+TGG | 0.565666 | 5.2:+8323380 | MS.gene015193:CDS |
GTTGTTGGCACCAATAGCAC+CGG | 0.570780 | 5.2:-8323507 | None:intergenic |
GGATAAGCTTGAACTTGCAG+AGG | 0.575420 | 5.2:+8323646 | MS.gene015193:CDS |
GTTGATTAGGATGTTGGCAT+CGG | 0.579727 | 5.2:-8323267 | None:intergenic |
AACAGGAAAGAGACTCCAAA+CGG | 0.582222 | 5.2:-8323410 | None:intergenic |
CAGGAGAGAAGATTGTTGTA+CGG | 0.584834 | 5.2:-8323046 | None:intergenic |
CCAAGTGGAGTATGCAATGG+AGG | 0.586792 | 5.2:+8323082 | MS.gene015193:CDS |
GAGTATGCAATGGAGGCCAT+TGG | 0.587807 | 5.2:+8323089 | MS.gene015193:CDS |
AGAGAACTTGACTAAGCTGT+TGG | 0.594383 | 5.2:+8323715 | MS.gene015193:CDS |
ACAACAATCTTCTCTCCTGA+AGG | 0.598896 | 5.2:+8323050 | MS.gene015193:CDS |
TTACCAAGTGGAGTATGCAA+TGG | 0.599728 | 5.2:+8323079 | MS.gene015193:CDS |
TCTCTTTGTGATACCAAGCA+AGG | 0.600349 | 5.2:+8323362 | MS.gene015193:CDS |
GGAAAGAGACTCCAAACGGA+CGG | 0.606946 | 5.2:-8323406 | None:intergenic |
TGCCATAGGAATCTTGTCGA+AGG | 0.620793 | 5.2:+8323124 | MS.gene015193:CDS |
GGCAGTACCAGCATTTCCAA+TGG | 0.624766 | 5.2:-8323105 | None:intergenic |
TGATACTTGACCTTTCCAGA+TGG | 0.634603 | 5.2:-8323680 | None:intergenic |
TGCAAGTTCAAGCTTATCCG+AGG | 0.657193 | 5.2:-8323642 | None:intergenic |
TGAAGGACGTCTTTACCAAG+TGG | 0.670157 | 5.2:+8323067 | MS.gene015193:CDS |
CTTTACATGAGCGATCCTAG+TGG | 0.672737 | 5.2:+8323464 | MS.gene015193:CDS |
GGACAGCACCAGTCTTACCT+CGG | 0.676388 | 5.2:+8323625 | MS.gene015193:CDS |
TAAGCTGTTGGTGAAGTCTG+GGG | 0.680201 | 5.2:+8323727 | MS.gene015193:CDS |
ACTACAAGGATGATATCACA+AGG | 0.683851 | 5.2:+8323558 | MS.gene015193:CDS |
GATCCTAGTGGAAATTATGG+CGG | 0.717061 | 5.2:+8323476 | MS.gene015193:CDS |
CAGCTTAGTCAAGTTCTCTG+GGG | 0.728921 | 5.2:-8323711 | None:intergenic |
CTACAAGGATGATATCACAA+GGG | 0.766354 | 5.2:+8323559 | MS.gene015193:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTCTAAAACAGGACTACA+AGG | + | chr5.2:8323544-8323563 | MS.gene015193:CDS | 30.0% |
!! | AGCACAATCAATTCTAAAAC+AGG | + | chr5.2:8323535-8323554 | MS.gene015193:CDS | 30.0% |
AAATTGTGTGTAACCTTGCT+TGG | - | chr5.2:8323378-8323397 | None:intergenic | 35.0% | |
AAGCAAGGTTACACACAATT+TGG | + | chr5.2:8323377-8323396 | MS.gene015193:CDS | 35.0% | |
ACTACAAGGATGATATCACA+AGG | + | chr5.2:8323558-8323577 | MS.gene015193:CDS | 35.0% | |
CTACAAGGATGATATCACAA+GGG | + | chr5.2:8323559-8323578 | MS.gene015193:CDS | 35.0% | |
!! | CATTTTCTCAGTTGATGTTG+AGG | - | chr5.2:8323201-8323220 | None:intergenic | 35.0% |
!! | GAAAGTTCTGAGCAAAACTA+TGG | + | chr5.2:8323604-8323623 | MS.gene015193:CDS | 35.0% |
AACAGCTTAGTCAAGTTCTC+TGG | - | chr5.2:8323716-8323735 | None:intergenic | 40.0% | |
AACAGGAAAGAGACTCCAAA+CGG | - | chr5.2:8323413-8323432 | None:intergenic | 40.0% | |
ACAACAATCTTCTCTCCTGA+AGG | + | chr5.2:8323050-8323069 | MS.gene015193:CDS | 40.0% | |
ACAGCTTAGTCAAGTTCTCT+GGG | - | chr5.2:8323715-8323734 | None:intergenic | 40.0% | |
ACATCCTAATCAACACTGCT+AGG | + | chr5.2:8323276-8323295 | MS.gene015193:CDS | 40.0% | |
AGAGAACTTGACTAAGCTGT+TGG | + | chr5.2:8323715-8323734 | MS.gene015193:CDS | 40.0% | |
AGCGATCCTAGTGGAAATTA+TGG | + | chr5.2:8323473-8323492 | MS.gene015193:CDS | 40.0% | |
ATAGGAATCTTGTCGAAGGA+TGG | + | chr5.2:8323128-8323147 | MS.gene015193:CDS | 40.0% | |
ATCCTTCGACAAGATTCCTA+TGG | - | chr5.2:8323129-8323148 | None:intergenic | 40.0% | |
CAAATGAGTAACGTTGTGCT+TGG | - | chr5.2:8323304-8323323 | None:intergenic | 40.0% | |
CAAGGTTACACACAATTTGG+TGG | + | chr5.2:8323380-8323399 | MS.gene015193:CDS | 40.0% | |
CAGGAGAGAAGATTGTTGTA+CGG | - | chr5.2:8323049-8323068 | None:intergenic | 40.0% | |
GATCCTAGTGGAAATTATGG+CGG | + | chr5.2:8323476-8323495 | MS.gene015193:CDS | 40.0% | |
GATTGAACCAACTGTTCAAC+AGG | - | chr5.2:8323344-8323363 | None:intergenic | 40.0% | |
GTTGATTAGGATGTTGGCAT+CGG | - | chr5.2:8323270-8323289 | None:intergenic | 40.0% | |
TAGGAATCTTGTCGAAGGAT+GGG | + | chr5.2:8323129-8323148 | MS.gene015193:CDS | 40.0% | |
TCTCTTTGTGATACCAAGCA+AGG | + | chr5.2:8323362-8323381 | MS.gene015193:CDS | 40.0% | |
TGATACTTGACCTTTCCAGA+TGG | - | chr5.2:8323683-8323702 | None:intergenic | 40.0% | |
TTACCAAGTGGAGTATGCAA+TGG | + | chr5.2:8323079-8323098 | MS.gene015193:CDS | 40.0% | |
TTAGAATTGATTGTGCTGCC+TGG | - | chr5.2:8323532-8323551 | None:intergenic | 40.0% | |
! | TTTTCTTGCACCATCTGGAA+AGG | + | chr5.2:8323670-8323689 | MS.gene015193:CDS | 40.0% |
!! | AGCAGTGTTGATTAGGATGT+TGG | - | chr5.2:8323276-8323295 | None:intergenic | 40.0% |
AAGCTTATCCGAGGTAAGAC+TGG | - | chr5.2:8323636-8323655 | None:intergenic | 45.0% | |
AATTATGGCGGTTGGAAAGC+CGG | + | chr5.2:8323488-8323507 | MS.gene015193:CDS | 45.0% | |
ACCAACTGTTCAACAGGCAT+TGG | - | chr5.2:8323338-8323357 | None:intergenic | 45.0% | |
ACTTGGTAAAGACGTCCTTC+AGG | - | chr5.2:8323068-8323087 | None:intergenic | 45.0% | |
AGGAATCTTGTCGAAGGATG+GGG | + | chr5.2:8323130-8323149 | MS.gene015193:CDS | 45.0% | |
CAACCGCCATAATTTCCACT+AGG | - | chr5.2:8323482-8323501 | None:intergenic | 45.0% | |
CAGCTTAGTCAAGTTCTCTG+GGG | - | chr5.2:8323714-8323733 | None:intergenic | 45.0% | |
CTAGTGGAAATTATGGCGGT+TGG | + | chr5.2:8323480-8323499 | MS.gene015193:CDS | 45.0% | |
CTCTTTCCTGTTTGCAGGAT+GGG | + | chr5.2:8323421-8323440 | MS.gene015193:CDS | 45.0% | |
CTTTACATGAGCGATCCTAG+TGG | + | chr5.2:8323464-8323483 | MS.gene015193:CDS | 45.0% | |
GCAGGATGGGACAAAAACTT+CGG | + | chr5.2:8323434-8323453 | MS.gene015193:CDS | 45.0% | |
GGATAAGCTTGAACTTGCAG+AGG | + | chr5.2:8323646-8323665 | MS.gene015193:CDS | 45.0% | |
TCTCTTTCCTGTTTGCAGGA+TGG | + | chr5.2:8323420-8323439 | MS.gene015193:CDS | 45.0% | |
TGAAGGACGTCTTTACCAAG+TGG | + | chr5.2:8323067-8323086 | MS.gene015193:CDS | 45.0% | |
TGCAAGTTCAAGCTTATCCG+AGG | - | chr5.2:8323645-8323664 | None:intergenic | 45.0% | |
TGCCATAGGAATCTTGTCGA+AGG | + | chr5.2:8323124-8323143 | MS.gene015193:CDS | 45.0% | |
TGCTCAGAACTTTCAGTGCA+AGG | - | chr5.2:8323598-8323617 | None:intergenic | 45.0% | |
TGTTGAGGTTTGCAGAAGCT+TGG | - | chr5.2:8323186-8323205 | None:intergenic | 45.0% | |
! | ACTAAGCTGTTGGTGAAGTC+TGG | + | chr5.2:8323725-8323744 | MS.gene015193:CDS | 45.0% |
! | ATGTTGCATGTGCTGTTGCT+GGG | + | chr5.2:8323237-8323256 | MS.gene015193:CDS | 45.0% |
! | CTAAGCTGTTGGTGAAGTCT+GGG | + | chr5.2:8323726-8323745 | MS.gene015193:CDS | 45.0% |
! | GAGGTTTTTCTTGCACCATC+TGG | + | chr5.2:8323665-8323684 | MS.gene015193:CDS | 45.0% |
! | TAAGCTGTTGGTGAAGTCTG+GGG | + | chr5.2:8323727-8323746 | MS.gene015193:CDS | 45.0% |
! | TGTTCTGGTTGGCGAAAAGA+AGG | + | chr5.2:8323154-8323173 | MS.gene015193:CDS | 45.0% |
! | TTTTGTCCCATCCTGCAAAC+AGG | - | chr5.2:8323430-8323449 | None:intergenic | 45.0% |
!! | GGATCCTAGCAGTGTTGATT+AGG | - | chr5.2:8323283-8323302 | None:intergenic | 45.0% |
AAGCAGTCTCTGTTGCTGGT+TGG | - | chr5.2:8323757-8323776 | None:intergenic | 50.0% | |
AAGGATGGGGTTGTTCTGGT+TGG | + | chr5.2:8323143-8323162 | MS.gene015193:CDS | 50.0% | |
ATGGAGGCCATTGGAAATGC+TGG | + | chr5.2:8323098-8323117 | MS.gene015193:CDS | 50.0% | |
CCAAGTGGAGTATGCAATGG+AGG | + | chr5.2:8323082-8323101 | MS.gene015193:CDS | 50.0% | |
CCTCCATTGCATACTCCACT+TGG | - | chr5.2:8323085-8323104 | None:intergenic | 50.0% | |
GAGTATGCAATGGAGGCCAT+TGG | + | chr5.2:8323089-8323108 | MS.gene015193:CDS | 50.0% | |
GCCAATGCCTGTTGAACAGT+TGG | + | chr5.2:8323334-8323353 | MS.gene015193:CDS | 50.0% | |
GGAAAGAGACTCCAAACGGA+CGG | - | chr5.2:8323409-8323428 | None:intergenic | 50.0% | |
GGAAATGCTGGTACTGCCAT+AGG | + | chr5.2:8323110-8323129 | MS.gene015193:CDS | 50.0% | |
GGAGTCTCTTTCCTGTTTGC+AGG | + | chr5.2:8323416-8323435 | MS.gene015193:CDS | 50.0% | |
GGCAGTACCAGCATTTCCAA+TGG | - | chr5.2:8323108-8323127 | None:intergenic | 50.0% | |
GTTGTTGGCACCAATAGCAC+CGG | - | chr5.2:8323510-8323529 | None:intergenic | 50.0% | |
TGATTGTGCTGCCTGGTTGT+TGG | - | chr5.2:8323525-8323544 | None:intergenic | 50.0% | |
! | AGCAGTCTCTGTTGCTGGTT+GGG | - | chr5.2:8323756-8323775 | None:intergenic | 50.0% |
! | CATGTTGCATGTGCTGTTGC+TGG | + | chr5.2:8323236-8323255 | MS.gene015193:CDS | 50.0% |
!! | GTTCAACAGGCATTGGCTCT+TGG | - | chr5.2:8323331-8323350 | None:intergenic | 50.0% |
!! | TGCTATTGGTGCCAACAACC+AGG | + | chr5.2:8323511-8323530 | MS.gene015193:CDS | 50.0% |
GGACAGCACCAGTCTTACCT+CGG | + | chr5.2:8323625-8323644 | MS.gene015193:CDS | 55.0% | |
GTCGAAGGATGGGGTTGTTC+TGG | + | chr5.2:8323139-8323158 | MS.gene015193:CDS | 55.0% | |
! | TTTGGTGGTCTCCGTCCGTT+TGG | + | chr5.2:8323395-8323414 | MS.gene015193:CDS | 55.0% |
!! | GGTTGGAAAGCCGGTGCTAT+TGG | + | chr5.2:8323497-8323516 | MS.gene015193:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 8323026 | 8323778 | 8323026 | ID=MS.gene015193 |
chr5.2 | mRNA | 8323026 | 8323778 | 8323026 | ID=MS.gene015193.t1;Parent=MS.gene015193 |
chr5.2 | exon | 8323026 | 8323778 | 8323026 | ID=MS.gene015193.t1.exon1;Parent=MS.gene015193.t1 |
chr5.2 | CDS | 8323026 | 8323778 | 8323026 | ID=cds.MS.gene015193.t1;Parent=MS.gene015193.t1 |
Gene Sequence |
Protein sequence |