Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84459.t1 | XP_003595788.1 | 100 | 246 | 0 | 0 | 1 | 246 | 1 | 246 | 1.30E-135 | 492.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84459.t1 | O48551 | 93.5 | 246 | 16 | 0 | 1 | 246 | 1 | 246 | 2.1e-129 | 463.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84459.t1 | G7IJ13 | 100.0 | 246 | 0 | 0 | 1 | 246 | 1 | 246 | 9.6e-136 | 492.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84459.t1 | MTR_2g060830 | 100.000 | 246 | 0 | 0 | 1 | 246 | 1 | 246 | 0.0 | 512 |
MS.gene84459.t1 | MTR_8g464460 | 93.496 | 246 | 16 | 0 | 1 | 246 | 1 | 246 | 3.14e-175 | 482 |
MS.gene84459.t1 | MTR_0167s0060 | 38.961 | 231 | 136 | 4 | 9 | 239 | 6 | 231 | 1.31e-51 | 168 |
MS.gene84459.t1 | MTR_7g070070 | 37.815 | 238 | 136 | 6 | 9 | 239 | 5 | 237 | 3.04e-42 | 144 |
MS.gene84459.t1 | MTR_8g075320 | 39.394 | 231 | 128 | 7 | 9 | 236 | 4 | 225 | 7.25e-41 | 140 |
MS.gene84459.t1 | MTR_5g016590 | 36.975 | 238 | 138 | 6 | 9 | 239 | 5 | 237 | 1.17e-40 | 140 |
MS.gene84459.t1 | MTR_2g016050 | 38.393 | 224 | 126 | 5 | 1 | 223 | 1 | 213 | 2.26e-39 | 137 |
MS.gene84459.t1 | MTR_1g112250 | 32.900 | 231 | 145 | 5 | 9 | 236 | 8 | 231 | 9.79e-39 | 135 |
MS.gene84459.t1 | MTR_1g022410 | 34.348 | 230 | 145 | 5 | 9 | 237 | 6 | 230 | 1.27e-38 | 136 |
MS.gene84459.t1 | MTR_6g024135 | 35.227 | 176 | 112 | 2 | 6 | 181 | 5 | 178 | 3.00e-32 | 118 |
MS.gene84459.t1 | MTR_4g012740 | 27.239 | 268 | 151 | 7 | 9 | 237 | 237 | 499 | 1.68e-22 | 96.3 |
MS.gene84459.t1 | MTR_4g057090 | 25.688 | 218 | 142 | 5 | 12 | 220 | 91 | 297 | 1.19e-15 | 75.5 |
MS.gene84459.t1 | MTR_3g113730 | 32.174 | 115 | 75 | 3 | 124 | 237 | 4 | 116 | 3.85e-12 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84459.t1 | AT5G35590 | 86.585 | 246 | 33 | 0 | 1 | 246 | 1 | 246 | 1.17e-166 | 460 |
MS.gene84459.t1 | AT2G05840 | 87.805 | 246 | 30 | 0 | 1 | 246 | 1 | 246 | 1.21e-166 | 460 |
MS.gene84459.t1 | AT2G05840 | 88.940 | 217 | 24 | 0 | 1 | 217 | 1 | 217 | 2.07e-149 | 416 |
MS.gene84459.t1 | AT2G05840 | 86.935 | 199 | 26 | 0 | 1 | 199 | 1 | 199 | 2.44e-134 | 377 |
MS.gene84459.t1 | AT1G16470 | 37.179 | 234 | 142 | 4 | 9 | 242 | 6 | 234 | 1.93e-48 | 160 |
MS.gene84459.t1 | AT1G16470 | 37.179 | 234 | 142 | 4 | 9 | 242 | 6 | 234 | 1.93e-48 | 160 |
MS.gene84459.t1 | AT1G79210 | 37.179 | 234 | 142 | 4 | 9 | 242 | 6 | 234 | 3.49e-48 | 159 |
MS.gene84459.t1 | AT1G79210 | 37.179 | 234 | 142 | 4 | 9 | 242 | 6 | 234 | 3.49e-48 | 159 |
MS.gene84459.t1 | AT1G79210 | 37.179 | 234 | 142 | 4 | 9 | 242 | 6 | 234 | 3.49e-48 | 159 |
MS.gene84459.t1 | AT3G51260 | 38.528 | 231 | 131 | 6 | 9 | 236 | 4 | 226 | 5.60e-43 | 146 |
MS.gene84459.t1 | AT5G66140 | 38.095 | 231 | 132 | 6 | 9 | 236 | 4 | 226 | 6.10e-43 | 146 |
MS.gene84459.t1 | AT3G51260 | 38.679 | 212 | 121 | 5 | 9 | 217 | 4 | 209 | 2.45e-40 | 139 |
MS.gene84459.t1 | AT1G53850 | 33.766 | 231 | 143 | 5 | 9 | 236 | 8 | 231 | 5.26e-40 | 138 |
MS.gene84459.t1 | AT1G53850 | 33.766 | 231 | 143 | 5 | 9 | 236 | 8 | 231 | 5.26e-40 | 138 |
MS.gene84459.t1 | AT3G22110 | 38.191 | 199 | 119 | 3 | 9 | 206 | 5 | 200 | 1.10e-39 | 137 |
MS.gene84459.t1 | AT3G14290 | 33.333 | 231 | 144 | 5 | 9 | 236 | 8 | 231 | 1.37e-39 | 137 |
MS.gene84459.t1 | AT1G47250 | 37.391 | 230 | 134 | 7 | 9 | 235 | 6 | 228 | 6.39e-39 | 136 |
MS.gene84459.t1 | AT5G42790 | 36.522 | 230 | 136 | 7 | 9 | 235 | 6 | 228 | 2.94e-38 | 135 |
MS.gene84459.t1 | AT2G27020 | 33.333 | 186 | 116 | 4 | 6 | 185 | 5 | 188 | 3.18e-30 | 113 |
MS.gene84459.t1 | AT2G27020 | 33.514 | 185 | 115 | 4 | 6 | 184 | 107 | 289 | 2.88e-29 | 113 |
MS.gene84459.t1 | AT4G15165 | 32.161 | 199 | 89 | 5 | 9 | 206 | 5 | 158 | 5.46e-24 | 95.9 |
Find 67 sgRNAs with CRISPR-Local
Find 386 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTGAGTTTCGCCATAAATT+TGG | 0.187140 | 2.2:-28272109 | MS.gene84459:CDS |
CACTAAGTACCTTGGTTTAC+TGG | 0.207612 | 2.2:-28272849 | MS.gene84459:CDS |
GCATCTCATATCCAAATTTA+TGG | 0.224828 | 2.2:+28272098 | None:intergenic |
TCAAGAGGCAATTAATTTCT+TGG | 0.230260 | 2.2:-28269534 | MS.gene84459:CDS |
TTGGGAATTGATGACGAAAA+TGG | 0.280211 | 2.2:-28271390 | MS.gene84459:CDS |
TTGCGTCGTTACTCAGAAAA+AGG | 0.297194 | 2.2:-28273006 | MS.gene84459:CDS |
CTGTGGATGTGTTGGCTAAA+TGG | 0.320318 | 2.2:-28272075 | MS.gene84459:intron |
GTTAACAGAGTATGCTTTCA+AGG | 0.381831 | 2.2:-28273081 | MS.gene84459:intron |
TACCTTGGTTTACTGGCAAC+TGG | 0.402138 | 2.2:-28272842 | MS.gene84459:CDS |
CTGCAAAGTTGCTATGGTCT+TGG | 0.414875 | 2.2:-28271409 | MS.gene84459:intron |
TTCAAGGCTGTTAAGGCCGC+AGG | 0.422354 | 2.2:-28273065 | MS.gene84459:CDS |
TACCTATGATGAGACAGTTC+AGG | 0.429803 | 2.2:-28269483 | MS.gene84459:intron |
TTCATTGCAGGACAAGCTCT+TGG | 0.434795 | 2.2:-28272903 | MS.gene84459:intron |
TGCAAAGTTGCTATGGTCTT+GGG | 0.454919 | 2.2:-28271408 | MS.gene84459:intron |
GTGGACAAAACTCTAAATTC+TGG | 0.455023 | 2.2:+28267379 | None:intergenic |
TTCAGCTGATGCTAGGACAC+TGG | 0.456415 | 2.2:-28272155 | MS.gene84459:intron |
TGTACTCAGGCCACAAGTGC+TGG | 0.456634 | 2.2:-28269566 | MS.gene84459:intron |
TGGGAATTGATGACGAAAAT+GGG | 0.457659 | 2.2:-28271389 | MS.gene84459:CDS |
GACCCTGCCGGGCATTACTT+TGG | 0.459387 | 2.2:-28271348 | MS.gene84459:CDS |
TGACCAAAGTAATGCCCGGC+AGG | 0.467216 | 2.2:+28271345 | None:intergenic |
GTCTCATCATAGGTAAATGA+AGG | 0.468541 | 2.2:+28269491 | None:intergenic |
ACTTGAAAGAGACGCCCCTC+GGG | 0.470636 | 2.2:+28273659 | None:intergenic |
GTATGCTTTCAAGGCTGTTA+AGG | 0.473677 | 2.2:-28273072 | MS.gene84459:CDS |
CTAGGTTGGAGTGGTGCAAA+AGG | 0.481357 | 2.2:-28267407 | MS.gene84459:intron |
ATCCTTCGATCCAGCACTTG+TGG | 0.485211 | 2.2:+28269556 | None:intergenic |
GCCGCAGGGATAACCTCAAT+TGG | 0.487617 | 2.2:-28273050 | MS.gene84459:CDS |
TTTACAAATGTGACCCTGCC+GGG | 0.490064 | 2.2:-28271359 | MS.gene84459:CDS |
AACTCAATCGCGCTCGCTGA+TGG | 0.493385 | 2.2:+28267330 | None:intergenic |
TTTCCCATCACTAAGTACCT+TGG | 0.495984 | 2.2:-28272857 | MS.gene84459:CDS |
TACCTGAACTGTCTCATCAT+AGG | 0.502050 | 2.2:+28269481 | None:intergenic |
GTTTCCTCGGACACCAATTG+AGG | 0.514352 | 2.2:+28273037 | None:intergenic |
CTTTACAAATGTGACCCTGC+CGG | 0.517868 | 2.2:-28271360 | MS.gene84459:CDS |
TTACTGGCAACTGGCATGAC+AGG | 0.518842 | 2.2:-28272833 | MS.gene84459:intron |
CACTTGAAAGAGACGCCCCT+CGG | 0.521556 | 2.2:+28273658 | None:intergenic |
CTTGCAATCAGTTCTTCAAG+AGG | 0.529591 | 2.2:-28268575 | MS.gene84459:CDS |
ATAAACATGAGTCGAGGAAG+TGG | 0.531301 | 2.2:-28273716 | None:intergenic |
ATGAGTCGAGGAAGTGGAGG+TGG | 0.536279 | 2.2:-28273710 | MS.gene84459:CDS |
CGAGGGGCGTCTCTTTCAAG+TGG | 0.547448 | 2.2:-28273657 | MS.gene84459:CDS |
CGCAAACAGAATCGTTTCCT+CGG | 0.548376 | 2.2:+28273024 | None:intergenic |
GGCCACAAGTGCTGGATCGA+AGG | 0.550812 | 2.2:-28269558 | MS.gene84459:CDS |
TAAACCAAGGTACTTAGTGA+TGG | 0.555581 | 2.2:+28272853 | None:intergenic |
CTCTTGAAGAACTGATTGCA+AGG | 0.559622 | 2.2:+28268576 | None:intergenic |
AAACCAAGGTACTTAGTGAT+GGG | 0.562271 | 2.2:+28272854 | None:intergenic |
CATTTAGCCAACACATCCAC+AGG | 0.565773 | 2.2:+28272076 | None:intergenic |
CATGCTTATATGAGACCACT+AGG | 0.569233 | 2.2:-28271572 | MS.gene84459:CDS |
CAAGTGCTCGTCGATTTCCT+CGG | 0.572807 | 2.2:+28267357 | None:intergenic |
CGGGCATTACTTTGGTCACA+AGG | 0.578471 | 2.2:-28271340 | MS.gene84459:intron |
GGGTCACATTTGTAAAGTTG+AGG | 0.580213 | 2.2:+28271366 | None:intergenic |
TGCTGGATCGAAGGATCAAG+AGG | 0.587729 | 2.2:-28269549 | MS.gene84459:CDS |
ATTGTGCTGCAAAGTTGCTA+TGG | 0.590145 | 2.2:-28271415 | MS.gene84459:intron |
CTTGTGACCAAAGTAATGCC+CGG | 0.591715 | 2.2:+28271341 | None:intergenic |
TGAGATGCCTGTGGATGTGT+TGG | 0.595670 | 2.2:-28272083 | MS.gene84459:CDS |
TATATGAGACCACTAGGAGT+AGG | 0.613786 | 2.2:-28271566 | MS.gene84459:intron |
GACCAAAGTAATGCCCGGCA+GGG | 0.621604 | 2.2:+28271346 | None:intergenic |
GTGCTCGTCGATTTCCTCGG+TGG | 0.630932 | 2.2:+28267360 | None:intergenic |
AACATGAGTCGAGGAAGTGG+AGG | 0.632274 | 2.2:-28273713 | MS.gene84459:CDS |
TCAAGGCTGTTAAGGCCGCA+GGG | 0.635784 | 2.2:-28273064 | MS.gene84459:CDS |
GAGGGGCGTCTCTTTCAAGT+GGG | 0.638985 | 2.2:-28273656 | MS.gene84459:intron |
TCTCATCATAGGTAAATGAA+GGG | 0.646694 | 2.2:+28269492 | None:intergenic |
ATAACCTCAATTGGTGTCCG+AGG | 0.651433 | 2.2:-28273041 | MS.gene84459:CDS |
TTGAAAGAGACGCCCCTCGG+GGG | 0.652662 | 2.2:+28273661 | None:intergenic |
CTTGAAAGAGACGCCCCTCG+GGG | 0.667484 | 2.2:+28273660 | None:intergenic |
TAATATATAAACATGAGTCG+AGG | 0.668937 | 2.2:-28273722 | None:intergenic |
TGCCAGTTGCCAGTAAACCA+AGG | 0.669415 | 2.2:+28272840 | None:intergenic |
ACCAATTGAGGTTATCCCTG+CGG | 0.697474 | 2.2:+28273049 | None:intergenic |
AAATTATACCTCAATCTCAG+TGG | 0.698073 | 2.2:+28268543 | None:intergenic |
ATTTGGATATGAGATGCCTG+TGG | 0.719306 | 2.2:-28272092 | MS.gene84459:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTAAATATGATAAAAGTT+GGG | + | chr2.2:28271920-28271939 | None:intergenic | 10.0% |
!! | ACATTATTATGAATTTATAA+TGG | + | chr2.2:28270533-28270552 | None:intergenic | 10.0% |
!! | ATTCAAAATTAAAACAAAAT+GGG | + | chr2.2:28267519-28267538 | None:intergenic | 10.0% |
!! | TAATATATTAATCATACTTT+GGG | + | chr2.2:28268631-28268650 | None:intergenic | 10.0% |
!! | TAATTAAATATGATAAAAGT+TGG | + | chr2.2:28271921-28271940 | None:intergenic | 10.0% |
!! | TTAATATATTAATCATACTT+TGG | + | chr2.2:28268632-28268651 | None:intergenic | 10.0% |
!!! | ACTCTTTATTTTAATTATTT+AGG | - | chr2.2:28272579-28272598 | MS.gene84459:intron | 10.0% |
!!! | TATTTTTTTGCTTATAATTT+GGG | + | chr2.2:28271860-28271879 | None:intergenic | 10.0% |
!! | AAGGATGAAATAAAAAATTT+AGG | + | chr2.2:28270608-28270627 | None:intergenic | 15.0% |
!! | ACATATACAAATTGAAATTT+CGG | - | chr2.2:28273073-28273092 | MS.gene84459:CDS | 15.0% |
!! | ATGAAATAAAAAATTTAGGT+GGG | + | chr2.2:28270604-28270623 | None:intergenic | 15.0% |
!! | ATTAAATATGATAAAAGTTG+GGG | + | chr2.2:28271919-28271938 | None:intergenic | 15.0% |
!! | CATCTAGTAAAATATAAATT+AGG | - | chr2.2:28268462-28268481 | MS.gene84459:intron | 15.0% |
!! | CATTCAAAATTAAAACAAAA+TGG | + | chr2.2:28267520-28267539 | None:intergenic | 15.0% |
!! | TACTCTAATAGAATAAATAA+TGG | + | chr2.2:28269958-28269977 | None:intergenic | 15.0% |
!! | TCTGAATAAAAAAAAAATCA+AGG | + | chr2.2:28272435-28272454 | None:intergenic | 15.0% |
!!! | ATAGAATAAATAATGGAATA+TGG | + | chr2.2:28269951-28269970 | None:intergenic | 15.0% |
!!! | ATCTAGAGATTTTAATTAAA+TGG | - | chr2.2:28271039-28271058 | MS.gene84459:intron | 15.0% |
!!! | ATTAGTTGTTATTTTATTAG+TGG | + | chr2.2:28272344-28272363 | None:intergenic | 15.0% |
!!! | ATTTCTTTTGCTTATAATTT+GGG | - | chr2.2:28272142-28272161 | MS.gene84459:CDS | 15.0% |
!!! | GTATTTTTTGCTTATAATTT+GGG | + | chr2.2:28271897-28271916 | None:intergenic | 15.0% |
!!! | GTATTTTTTTGCTTATAATT+TGG | + | chr2.2:28271861-28271880 | None:intergenic | 15.0% |
!!! | GTTTGGTTATTTTATTAAAT+GGG | - | chr2.2:28273298-28273317 | MS.gene84459:intron | 15.0% |
!!! | TTAGTTGTTATTTTATTAGT+GGG | + | chr2.2:28272343-28272362 | None:intergenic | 15.0% |
!!! | TTTGCATTTAATTTCTTTTT+GGG | + | chr2.2:28271970-28271989 | None:intergenic | 15.0% |
!!! | TTTGTTTTAATTTTGAATGT+GGG | - | chr2.2:28267521-28267540 | MS.gene84459:intron | 15.0% |
!!! | TTTTAATCATTCATACAAAT+AGG | + | chr2.2:28269125-28269144 | None:intergenic | 15.0% |
!!! | TTTTGCATTTAATTTCTTTT+TGG | + | chr2.2:28271971-28271990 | None:intergenic | 15.0% |
!!! | TTTTGTTTTAATTTTGAATG+TGG | - | chr2.2:28267520-28267539 | MS.gene84459:intron | 15.0% |
!! | AAAAGTTATTTATACAAGTG+TGG | - | chr2.2:28271128-28271147 | MS.gene84459:intron | 20.0% |
!! | AAATGAACAAACCAAATAAT+AGG | - | chr2.2:28272825-28272844 | MS.gene84459:intron | 20.0% |
!! | AAATTGCAAATAAAAGACAA+AGG | + | chr2.2:28270627-28270646 | None:intergenic | 20.0% |
!! | ACATCATGATAATTGAAATT+TGG | - | chr2.2:28272549-28272568 | MS.gene84459:intron | 20.0% |
!! | AGATGATTAATAACTAATTC+AGG | - | chr2.2:28272770-28272789 | MS.gene84459:intron | 20.0% |
!! | AGTAATTGTAATTTCACTTA+GGG | - | chr2.2:28273154-28273173 | MS.gene84459:intron | 20.0% |
!! | ATATATCATAGTTCAACTTA+TGG | + | chr2.2:28268778-28268797 | None:intergenic | 20.0% |
!! | ATCCCAAATAAAAAATAGAT+GGG | + | chr2.2:28268580-28268599 | None:intergenic | 20.0% |
!! | ATTAATAACTAATTCAGGTA+GGG | - | chr2.2:28272775-28272794 | MS.gene84459:intron | 20.0% |
!! | CAAAATAAATTTGACTCAAA+TGG | + | chr2.2:28272866-28272885 | None:intergenic | 20.0% |
!! | CAATTTGTATATGTATATCT+TGG | + | chr2.2:28273067-28273086 | None:intergenic | 20.0% |
!! | CATTATTATAATACATCTGT+TGG | - | chr2.2:28269299-28269318 | MS.gene84459:intron | 20.0% |
!! | GATGAAATAAAAAATTTAGG+TGG | + | chr2.2:28270605-28270624 | None:intergenic | 20.0% |
!! | GTAATTACACATATTATTGA+GGG | + | chr2.2:28269173-28269192 | None:intergenic | 20.0% |
!! | TAATTACACATATTATTGAG+GGG | + | chr2.2:28269172-28269191 | None:intergenic | 20.0% |
!! | TAGTTATAGAGAAAATGAAA+GGG | + | chr2.2:28272011-28272030 | None:intergenic | 20.0% |
!! | TCATACATATATGATATGTA+TGG | - | chr2.2:28271219-28271238 | MS.gene84459:intron | 20.0% |
!! | TTAAAAACAAAAAAGTTCCA+AGG | + | chr2.2:28271705-28271724 | None:intergenic | 20.0% |
!! | TTAGTTATAGAGAAAATGAA+AGG | + | chr2.2:28272012-28272031 | None:intergenic | 20.0% |
!!! | ACAACTTCTTCTTTTTTTTT+TGG | + | chr2.2:28270232-28270251 | None:intergenic | 20.0% |
!!! | ATTATTTGGTTTGTTCATTT+AGG | + | chr2.2:28272825-28272844 | None:intergenic | 20.0% |
!!! | GAAATTTTCATTTGAAAGTT+AGG | - | chr2.2:28273532-28273551 | MS.gene84459:intron | 20.0% |
!!! | GACTATCTAAATTGATTTTA+AGG | - | chr2.2:28267616-28267635 | MS.gene84459:intron | 20.0% |
!!! | GATTTCTTTTGCTTATAATT+TGG | - | chr2.2:28272141-28272160 | MS.gene84459:CDS | 20.0% |
!!! | GGTATTTTTTGCTTATAATT+TGG | + | chr2.2:28271898-28271917 | None:intergenic | 20.0% |
!!! | GGTTTGGTTATTTTATTAAA+TGG | - | chr2.2:28273297-28273316 | MS.gene84459:intron | 20.0% |
!!! | GTTAACATCAATCTAAAATT+GGG | - | chr2.2:28267780-28267799 | MS.gene84459:intron | 20.0% |
!!! | TAGTTGTTATTTTATTAGTG+GGG | + | chr2.2:28272342-28272361 | None:intergenic | 20.0% |
!!! | TGGAACTTTTTTGTTTTTAA+GGG | - | chr2.2:28271705-28271724 | MS.gene84459:intron | 20.0% |
!!! | TGTTAACATCAATCTAAAAT+TGG | - | chr2.2:28267779-28267798 | MS.gene84459:intron | 20.0% |
!!! | TTGGAACTTTTTTGTTTTTA+AGG | - | chr2.2:28271704-28271723 | MS.gene84459:intron | 20.0% |
!!! | TTTTATCTCGCATTAATAAA+AGG | - | chr2.2:28270370-28270389 | MS.gene84459:intron | 20.0% |
! | AAAATAGTTGCCAAAAAAAG+AGG | + | chr2.2:28271807-28271826 | None:intergenic | 25.0% |
! | AAACCTGATATTATCTGAAA+CGG | - | chr2.2:28268492-28268511 | MS.gene84459:intron | 25.0% |
! | AAATAGTTGCCAAAAAAAGA+GGG | + | chr2.2:28271806-28271825 | None:intergenic | 25.0% |
! | AAATCATAATAGGCTAACAA+CGG | + | chr2.2:28269064-28269083 | None:intergenic | 25.0% |
! | AACAAACCAAATAATAGGTT+TGG | - | chr2.2:28272830-28272849 | MS.gene84459:intron | 25.0% |
! | AATAAAAGAATTACATGCAG+TGG | + | chr2.2:28269244-28269263 | None:intergenic | 25.0% |
! | AATAAGCTGAAAACAACTTA+TGG | - | chr2.2:28271099-28271118 | MS.gene84459:intron | 25.0% |
! | ATAAAAGAATTACATGCAGT+GGG | + | chr2.2:28269243-28269262 | None:intergenic | 25.0% |
! | ATGCAAGAAAATGATAAACT+AGG | - | chr2.2:28270796-28270815 | MS.gene84459:intron | 25.0% |
! | ATGTATATCTTGGATTTGAT+TGG | + | chr2.2:28273057-28273076 | None:intergenic | 25.0% |
! | CAAAAAAAGAGGGAAAATAA+GGG | + | chr2.2:28271796-28271815 | None:intergenic | 25.0% |
! | CAAGTATAGACTATAGATAA+TGG | - | chr2.2:28268739-28268758 | MS.gene84459:intron | 25.0% |
! | CATCCCAAATAAAAAATAGA+TGG | + | chr2.2:28268581-28268600 | None:intergenic | 25.0% |
! | CATTATCTATAGTCTATACT+TGG | + | chr2.2:28268741-28268760 | None:intergenic | 25.0% |
! | CGCAAAAATAATAGAGAAAA+AGG | + | chr2.2:28270091-28270110 | None:intergenic | 25.0% |
! | CGTAATTACACATATTATTG+AGG | + | chr2.2:28269174-28269193 | None:intergenic | 25.0% |
! | GAATTTGTAAGACAATTCTA+GGG | + | chr2.2:28270848-28270867 | None:intergenic | 25.0% |
! | GAGTAATTGTAATTTCACTT+AGG | - | chr2.2:28273153-28273172 | MS.gene84459:intron | 25.0% |
! | GATGTTTCCTAAATCATAAT+AGG | + | chr2.2:28269074-28269093 | None:intergenic | 25.0% |
! | GATTAATAACTAATTCAGGT+AGG | - | chr2.2:28272774-28272793 | MS.gene84459:intron | 25.0% |
! | GTTCAAAAGTTATCACAAAA+TGG | + | chr2.2:28270028-28270047 | None:intergenic | 25.0% |
! | TAAAATGCTGTGTAAATCTT+TGG | + | chr2.2:28267833-28267852 | None:intergenic | 25.0% |
! | TAATGTAAAAGAAGATCAAG+AGG | + | chr2.2:28271611-28271630 | None:intergenic | 25.0% |
! | TCTGTAATCATATATCTAGT+TGG | + | chr2.2:28268718-28268737 | None:intergenic | 25.0% |
! | TCTTCATGTTTGAATGTAAA+TGG | - | chr2.2:28273597-28273616 | MS.gene84459:intron | 25.0% |
! | TGAAAACCAAACCTATTATT+TGG | + | chr2.2:28272839-28272858 | None:intergenic | 25.0% |
! | TGTTGTATATAACAGAAAGA+GGG | + | chr2.2:28270892-28270911 | None:intergenic | 25.0% |
! | TTAATAACTAATTCAGGTAG+GGG | - | chr2.2:28272776-28272795 | MS.gene84459:intron | 25.0% |
! | TTAGGAATGATTAAAATTCG+TGG | - | chr2.2:28273550-28273569 | MS.gene84459:intron | 25.0% |
! | TTGTTGTATATAACAGAAAG+AGG | + | chr2.2:28270893-28270912 | None:intergenic | 25.0% |
! | TTTCCTGTTAAAGTTAATAC+AGG | - | chr2.2:28268319-28268338 | MS.gene84459:intron | 25.0% |
! | TTTCTATGAAACTTATTCCA+AGG | - | chr2.2:28272058-28272077 | MS.gene84459:intron | 25.0% |
!! | AACCATTTTATAACAGCTTT+TGG | + | chr2.2:28270141-28270160 | None:intergenic | 25.0% |
!! | ACATGAAGAAAAACACTTTT+TGG | + | chr2.2:28273586-28273605 | None:intergenic | 25.0% |
!! | ACCATTTTATAACAGCTTTT+GGG | + | chr2.2:28270140-28270159 | None:intergenic | 25.0% |
!! | AGGAATTGGTTTAGTATAAA+AGG | - | chr2.2:28270666-28270685 | MS.gene84459:intron | 25.0% |
!! | ATTGATTTATTCACACTTTC+TGG | - | chr2.2:28267732-28267751 | MS.gene84459:intron | 25.0% |
!! | CTCTAAAAAATGGAATTGTT+TGG | - | chr2.2:28273326-28273345 | MS.gene84459:intron | 25.0% |
!! | TAAGTTGAAATATTCATTGC+AGG | - | chr2.2:28268128-28268147 | MS.gene84459:intron | 25.0% |
!! | TCATATTTCTACCCAAAAAA+AGG | - | chr2.2:28267666-28267685 | MS.gene84459:intron | 25.0% |
!! | TTGTTAGCCTATTATGATTT+AGG | - | chr2.2:28269064-28269083 | MS.gene84459:intron | 25.0% |
!! | TTTAAAGCATGATCATGTAA+CGG | + | chr2.2:28272397-28272416 | None:intergenic | 25.0% |
!! | TTTTACTAGATGCAATAAAG+TGG | + | chr2.2:28268367-28268386 | None:intergenic | 25.0% |
!! | TTTTTGCTTATAATTTGGGA+AGG | + | chr2.2:28271856-28271875 | None:intergenic | 25.0% |
!!! | ATAGTTTTTTGTGTTATCCT+TGG | + | chr2.2:28272078-28272097 | None:intergenic | 25.0% |
!!! | ATTTACACAGCATTTTAATG+AGG | - | chr2.2:28267836-28267855 | MS.gene84459:intron | 25.0% |
!!! | CACCCATCTATTTTTTATTT+GGG | - | chr2.2:28268575-28268594 | MS.gene84459:CDS | 25.0% |
!!! | GAACTTTTTTGTTTTTAAGG+GGG | - | chr2.2:28271707-28271726 | MS.gene84459:intron | 25.0% |
!!! | GGAACTTTTTTGTTTTTAAG+GGG | - | chr2.2:28271706-28271725 | MS.gene84459:intron | 25.0% |
!!! | GGTGATAATTTTTGTTTTAG+TGG | - | chr2.2:28267429-28267448 | MS.gene84459:intron | 25.0% |
!!! | GTTATTTTATTAAATGGGCT+GGG | - | chr2.2:28273303-28273322 | MS.gene84459:intron | 25.0% |
!!! | TCTATTATTTTTGCGCAATA+AGG | - | chr2.2:28270096-28270115 | MS.gene84459:intron | 25.0% |
!!! | TTACAATGTGGTGTTTTAAT+TGG | - | chr2.2:28267458-28267477 | MS.gene84459:intron | 25.0% |
!!! | TTAGACTTTATTTTGCTTGT+AGG | - | chr2.2:28268086-28268105 | MS.gene84459:intron | 25.0% |
!!! | TTTTTTGGGTAGAAATATGA+GGG | + | chr2.2:28267666-28267685 | None:intergenic | 25.0% |
!!! | TTTTTTTGGGTAGAAATATG+AGG | + | chr2.2:28267667-28267686 | None:intergenic | 25.0% |
AAAAATTTACCTACTCCTAG+TGG | + | chr2.2:28269489-28269508 | None:intergenic | 30.0% | |
AAATTATACCTCAATCTCAG+TGG | + | chr2.2:28272503-28272522 | None:intergenic | 30.0% | |
ACAAAAATATCTCATCGTGT+TGG | - | chr2.2:28268855-28268874 | MS.gene84459:intron | 30.0% | |
ACAGATATAAACAGATGGTT+AGG | + | chr2.2:28270273-28270292 | None:intergenic | 30.0% | |
ATAAATGATGCAGCACTTAA+AGG | + | chr2.2:28272624-28272643 | None:intergenic | 30.0% | |
ATTGCACAGATATAAACAGA+TGG | + | chr2.2:28270278-28270297 | None:intergenic | 30.0% | |
ATTGTCTTACAAATTCCAAC+TGG | - | chr2.2:28270852-28270871 | MS.gene84459:intron | 30.0% | |
CAATGCACATCACTATATAT+AGG | + | chr2.2:28271316-28271335 | None:intergenic | 30.0% | |
CCAAAAAAAGAGGGAAAATA+AGG | + | chr2.2:28271797-28271816 | None:intergenic | 30.0% | |
GAAAACAGTATCAATAACGA+TGG | + | chr2.2:28269587-28269606 | None:intergenic | 30.0% | |
GCATCTCATATCCAAATTTA+TGG | + | chr2.2:28268948-28268967 | None:intergenic | 30.0% | |
GCTAAACCAAATTTCACTTA+GGG | - | chr2.2:28273267-28273286 | MS.gene84459:intron | 30.0% | |
GGAATTTGTAAGACAATTCT+AGG | + | chr2.2:28270849-28270868 | None:intergenic | 30.0% | |
GTCTACAAGTGCATATAATT+GGG | + | chr2.2:28271420-28271439 | None:intergenic | 30.0% | |
GTGTAAAAGAATACACAAGT+TGG | + | chr2.2:28269414-28269433 | None:intergenic | 30.0% | |
GTTGTATATAACAGAAAGAG+GGG | + | chr2.2:28270891-28270910 | None:intergenic | 30.0% | |
TAAAAAATTTAGGTGGGTGA+AGG | + | chr2.2:28270598-28270617 | None:intergenic | 30.0% | |
TAAATGATGCAGCACTTAAA+GGG | + | chr2.2:28272623-28272642 | None:intergenic | 30.0% | |
TAATTTCACTTAGGGTTCAA+TGG | - | chr2.2:28273162-28273181 | MS.gene84459:intron | 30.0% | |
TACCTTTGTAGAACTATGAT+AGG | - | chr2.2:28270646-28270665 | MS.gene84459:intron | 30.0% | |
TCAAGAGGCAATTAATTTCT+TGG | - | chr2.2:28271509-28271528 | MS.gene84459:intron | 30.0% | |
TCCCAAAAGCTGTTATAAAA+TGG | - | chr2.2:28270136-28270155 | MS.gene84459:intron | 30.0% | |
TCTCATCATAGGTAAATGAA+GGG | + | chr2.2:28271554-28271573 | None:intergenic | 30.0% | |
TCTTAGATTGCTAATAGCAT+AGG | + | chr2.2:28269100-28269119 | None:intergenic | 30.0% | |
TGATGATATAATGTCGTGTA+TGG | - | chr2.2:28269539-28269558 | MS.gene84459:CDS | 30.0% | |
TGCTAAACCAAATTTCACTT+AGG | - | chr2.2:28273266-28273285 | MS.gene84459:intron | 30.0% | |
TGTAGAACTATGATAGGAAT+TGG | - | chr2.2:28270652-28270671 | MS.gene84459:intron | 30.0% | |
TGTCTACAAGTGCATATAAT+TGG | + | chr2.2:28271421-28271440 | None:intergenic | 30.0% | |
TTCAATTATCATGATGTCAC+AGG | + | chr2.2:28272546-28272565 | None:intergenic | 30.0% | |
TTGATGAAACAGTTTGTAAC+CGG | - | chr2.2:28272883-28272902 | MS.gene84459:CDS | 30.0% | |
TTTGTGATGACAAATTCAAG+TGG | + | chr2.2:28267810-28267829 | None:intergenic | 30.0% | |
! | AGTTCTTCAAGAGGATTTTA+AGG | - | chr2.2:28272477-28272496 | MS.gene84459:intron | 30.0% |
! | CTTTTGCTTATAATTTGGGA+TGG | - | chr2.2:28272146-28272165 | MS.gene84459:CDS | 30.0% |
! | GATTTTATTGTGATGTACTC+AGG | - | chr2.2:28271464-28271483 | MS.gene84459:intron | 30.0% |
! | GCATACACAATGAATGTTTT+TGG | - | chr2.2:28271770-28271789 | MS.gene84459:intron | 30.0% |
! | GGTTGTATTTTGCATTTTCT+AGG | - | chr2.2:28273618-28273637 | MS.gene84459:intron | 30.0% |
! | GTATTTTGCATTTTCTAGGT+TGG | - | chr2.2:28273622-28273641 | MS.gene84459:intron | 30.0% |
! | TATTGCAATCTAAGAGCATA+CGG | + | chr2.2:28269278-28269297 | None:intergenic | 30.0% |
! | TGGTTCAGATTTTTATGTAC+TGG | - | chr2.2:28267488-28267507 | MS.gene84459:intron | 30.0% |
! | TTCCTATCATAGTTCTACAA+AGG | + | chr2.2:28270651-28270670 | None:intergenic | 30.0% |
! | TTTGATAAGGTGGTAGTTTT+GGG | - | chr2.2:28272268-28272287 | MS.gene84459:intron | 30.0% |
!! | CAAAATCTCTAGAATTAGGT+TGG | - | chr2.2:28273110-28273129 | MS.gene84459:intron | 30.0% |
!! | CAACCTAATTCTAGAGATTT+TGG | + | chr2.2:28273112-28273131 | None:intergenic | 30.0% |
!! | CTTCCAAAATCTCTAGAATT+AGG | - | chr2.2:28273106-28273125 | MS.gene84459:intron | 30.0% |
!! | GAAGAAAAACACTTTTTGGA+TGG | + | chr2.2:28273582-28273601 | None:intergenic | 30.0% |
!! | GGTTATTTTATTAAATGGGC+TGG | - | chr2.2:28273302-28273321 | MS.gene84459:intron | 30.0% |
!! | TAGAGATTTTGGAAGAGATT+TGG | + | chr2.2:28273101-28273120 | None:intergenic | 30.0% |
!! | TTGAATTGAGTTGACTAGTT+TGG | - | chr2.2:28267912-28267931 | MS.gene84459:intron | 30.0% |
!! | TTGGTTTGTTCATTTAGGTT+TGG | + | chr2.2:28272820-28272839 | None:intergenic | 30.0% |
!!! | CCTTATTTTCCCTCTTTTTT+TGG | - | chr2.2:28271794-28271813 | MS.gene84459:intron | 30.0% |
!!! | GCACCCATCTATTTTTTATT+TGG | - | chr2.2:28268574-28268593 | MS.gene84459:CDS | 30.0% |
!!! | GTGTTTTAATTGGTCAAATG+TGG | - | chr2.2:28267468-28267487 | MS.gene84459:intron | 30.0% |
!!! | TAGAATTAGGTTGGTTTTGA+AGG | - | chr2.2:28273119-28273138 | MS.gene84459:intron | 30.0% |
!!! | TAGTCTTAGCTGGATTTTTT+TGG | - | chr2.2:28271648-28271667 | MS.gene84459:intron | 30.0% |
AAATTGTGCGATTTGTGATG+CGG | - | chr2.2:28273207-28273226 | MS.gene84459:intron | 35.0% | |
AACCAAATTTCACTTAGGGT+TGG | - | chr2.2:28273271-28273290 | MS.gene84459:intron | 35.0% | |
AACCAACCCTAAGTGAAATT+TGG | + | chr2.2:28273276-28273295 | None:intergenic | 35.0% | |
AAGCCGTTTCAGATAATATC+AGG | + | chr2.2:28268498-28268517 | None:intergenic | 35.0% | |
ACATGTAGAGTCAAACAATG+TGG | + | chr2.2:28269356-28269375 | None:intergenic | 35.0% | |
AGCTCACAGCTTAATTAGTA+GGG | - | chr2.2:28271263-28271282 | MS.gene84459:intron | 35.0% | |
ATTGAATGTATGTGCCATGT+CGG | - | chr2.2:28272229-28272248 | MS.gene84459:intron | 35.0% | |
CAAGTAAAACAACACACAAC+AGG | + | chr2.2:28267890-28267909 | None:intergenic | 35.0% | |
CAGATCTGCAACAAAAATGA+TGG | + | chr2.2:28268255-28268274 | None:intergenic | 35.0% | |
CATTGTGTATGCTCAATAGA+TGG | + | chr2.2:28271762-28271781 | None:intergenic | 35.0% | |
CTGAGTGATTGTACAGTTTA+GGG | - | chr2.2:28270400-28270419 | MS.gene84459:intron | 35.0% | |
CTGCCTGTATTAACTTTAAC+AGG | + | chr2.2:28268325-28268344 | None:intergenic | 35.0% | |
GAATTGTTTGGTTGTTGATC+TGG | - | chr2.2:28273338-28273357 | MS.gene84459:intron | 35.0% | |
GATAGGAACTGGTTATAAAC+CGG | + | chr2.2:28272905-28272924 | None:intergenic | 35.0% | |
GCAATAAGGAGAAACAAAGA+AGG | - | chr2.2:28270110-28270129 | MS.gene84459:intron | 35.0% | |
GCTTAATTGATCTTTCTACC+TGG | - | chr2.2:28271285-28271304 | MS.gene84459:intron | 35.0% | |
GGTACGTAAATTGTGTTAGT+AGG | - | chr2.2:28267408-28267427 | MS.gene84459:intron | 35.0% | |
GTCTCATCATAGGTAAATGA+AGG | + | chr2.2:28271555-28271574 | None:intergenic | 35.0% | |
GTGGACAAAACTCTAAATTC+TGG | + | chr2.2:28273667-28273686 | None:intergenic | 35.0% | |
GTTAACAGAGTATGCTTTCA+AGG | - | chr2.2:28267962-28267981 | MS.gene84459:intron | 35.0% | |
TAAACAGATGGTTAGGTACT+AGG | + | chr2.2:28270266-28270285 | None:intergenic | 35.0% | |
TAGAGTACGTGATAGAAAGA+GGG | + | chr2.2:28271197-28271216 | None:intergenic | 35.0% | |
TAGCTCACAGCTTAATTAGT+AGG | - | chr2.2:28271262-28271281 | MS.gene84459:intron | 35.0% | |
TCATATATCTAGTTGGCCAT+AGG | + | chr2.2:28268711-28268730 | None:intergenic | 35.0% | |
TGAGTGATTGTACAGTTTAG+GGG | - | chr2.2:28270401-28270420 | MS.gene84459:intron | 35.0% | |
TGGAATAACTTACTACTGCA+CGG | + | chr2.2:28271170-28271189 | None:intergenic | 35.0% | |
TTAGAGTACGTGATAGAAAG+AGG | + | chr2.2:28271198-28271217 | None:intergenic | 35.0% | |
TTGAAAACAATTGCCAACCT+AGG | + | chr2.2:28267700-28267719 | None:intergenic | 35.0% | |
TTTGGTTGTTGATCTGGTTA+GGG | - | chr2.2:28273344-28273363 | MS.gene84459:intron | 35.0% | |
! | AAACCAAGGTACTTAGTGAT+GGG | + | chr2.2:28268192-28268211 | None:intergenic | 35.0% |
! | ATCTTGGATTTGATTGGTTC+TGG | + | chr2.2:28273051-28273070 | None:intergenic | 35.0% |
! | ATTGCAATCTAAGAGCATAC+GGG | + | chr2.2:28269277-28269296 | None:intergenic | 35.0% |
! | CATCACTACTGATTACAAAG+AGG | + | chr2.2:28270311-28270330 | None:intergenic | 35.0% |
! | CTTTGATAAGGTGGTAGTTT+TGG | - | chr2.2:28272267-28272286 | MS.gene84459:intron | 35.0% |
! | GTGTATTCTTTTACACGAAC+AGG | - | chr2.2:28269418-28269437 | MS.gene84459:intron | 35.0% |
! | TAAACCAAGGTACTTAGTGA+TGG | + | chr2.2:28268193-28268212 | None:intergenic | 35.0% |
! | TAGTGGAACGTTTTACAATG+TGG | - | chr2.2:28267446-28267465 | MS.gene84459:intron | 35.0% |
! | TGAAGATTGGCTCTTTGATA+AGG | - | chr2.2:28272255-28272274 | MS.gene84459:intron | 35.0% |
! | TGCTTATAATTTGGGATGGA+GGG | - | chr2.2:28272150-28272169 | MS.gene84459:CDS | 35.0% |
! | TGTAAGTTACATACTTGCTG+TGG | - | chr2.2:28273461-28273480 | MS.gene84459:intron | 35.0% |
! | TTGCTTATAATTTGGGATGG+AGG | - | chr2.2:28272149-28272168 | MS.gene84459:CDS | 35.0% |
! | TTGGTGACTATAATGGGAAA+CGG | + | chr2.2:28273017-28273036 | None:intergenic | 35.0% |
!! | AATTTCACTTAGGGTTGGTT+TGG | - | chr2.2:28273276-28273295 | MS.gene84459:intron | 35.0% |
!! | ATTGAGTTGACTAGTTTGGT+AGG | - | chr2.2:28267916-28267935 | MS.gene84459:intron | 35.0% |
!! | CGATTGTTGGTGACTATAAT+GGG | + | chr2.2:28273023-28273042 | None:intergenic | 35.0% |
!! | CTGAAACGGCTTGTTAATTA+GGG | - | chr2.2:28268506-28268525 | MS.gene84459:intron | 35.0% |
!! | TCGATTGTTGGTGACTATAA+TGG | + | chr2.2:28273024-28273043 | None:intergenic | 35.0% |
!! | TCTGAAACGGCTTGTTAATT+AGG | - | chr2.2:28268505-28268524 | MS.gene84459:intron | 35.0% |
!! | TGAAACGGCTTGTTAATTAG+GGG | - | chr2.2:28268507-28268526 | MS.gene84459:intron | 35.0% |
!! | TGGGAATTGATGACGAAAAT+GGG | - | chr2.2:28269654-28269673 | MS.gene84459:intron | 35.0% |
!! | TTGATAAGGTGGTAGTTTTG+GGG | - | chr2.2:28272269-28272288 | MS.gene84459:intron | 35.0% |
!! | TTGGGAATTGATGACGAAAA+TGG | - | chr2.2:28269653-28269672 | MS.gene84459:intron | 35.0% |
!!! | AGTTTTGGGGTAAGGAAATA+GGG | - | chr2.2:28272282-28272301 | MS.gene84459:intron | 35.0% |
!!! | CTTAGCTGGATTTTTTTGGT+AGG | - | chr2.2:28271652-28271671 | MS.gene84459:intron | 35.0% |
!!! | TAGTTTTGGGGTAAGGAAAT+AGG | - | chr2.2:28272281-28272300 | MS.gene84459:intron | 35.0% |
!!! | TGAAGGCTCGTATTTTAACA+GGG | + | chr2.2:28270581-28270600 | None:intergenic | 35.0% |
AAAAAAAGGACCGTTGACCT+AGG | - | chr2.2:28267680-28267699 | MS.gene84459:intron | 40.0% | |
AAAACGAACTGGATAGGAAC+TGG | + | chr2.2:28272916-28272935 | None:intergenic | 40.0% | |
AACTGCTTGTGACAAGTTCA+AGG | + | chr2.2:28270488-28270507 | None:intergenic | 40.0% | |
ACGAACAACACACCAATACT+AGG | + | chr2.2:28273392-28273411 | None:intergenic | 40.0% | |
ACTTTGGTCACAAGGTACAT+AGG | - | chr2.2:28269711-28269730 | MS.gene84459:intron | 40.0% | |
AGACACAAAACGAACTGGAT+AGG | + | chr2.2:28272922-28272941 | None:intergenic | 40.0% | |
ATGCAGGTAGAGAAACTACA+TGG | + | chr2.2:28272699-28272718 | None:intergenic | 40.0% | |
ATGTAGTTTCTCTACCTGCA+TGG | - | chr2.2:28272698-28272717 | MS.gene84459:intron | 40.0% | |
ATTGTGCTGCAAAGTTGCTA+TGG | - | chr2.2:28269628-28269647 | MS.gene84459:intron | 40.0% | |
ATTTGGATATGAGATGCCTG+TGG | - | chr2.2:28268951-28268970 | MS.gene84459:intron | 40.0% | |
CACTAAGTACCTTGGTTTAC+TGG | - | chr2.2:28268194-28268213 | MS.gene84459:intron | 40.0% | |
CACTATATATAGGTGCATCC+AGG | + | chr2.2:28271306-28271325 | None:intergenic | 40.0% | |
CATATTATTGAGGGGAATGC+TGG | + | chr2.2:28269164-28269183 | None:intergenic | 40.0% | |
CATCGTCACTTGATGTGATA+AGG | - | chr2.2:28271384-28271403 | MS.gene84459:CDS | 40.0% | |
CATGCTTATATGAGACCACT+AGG | - | chr2.2:28269471-28269490 | MS.gene84459:intron | 40.0% | |
CGAACAACACACCAATACTA+GGG | + | chr2.2:28273391-28273410 | None:intergenic | 40.0% | |
CGTATGGTAGACAAAGAAAG+GGG | + | chr2.2:28271002-28271021 | None:intergenic | 40.0% | |
CGTTACTCAGAAAAAGGTTC+CGG | - | chr2.2:28268043-28268062 | MS.gene84459:intron | 40.0% | |
CTCTTGAAGAACTGATTGCA+AGG | + | chr2.2:28272470-28272489 | None:intergenic | 40.0% | |
CTTGCAATCAGTTCTTCAAG+AGG | - | chr2.2:28272468-28272487 | MS.gene84459:intron | 40.0% | |
GAACAACACACCAATACTAG+GGG | + | chr2.2:28273390-28273409 | None:intergenic | 40.0% | |
GCGTATGGTAGACAAAGAAA+GGG | + | chr2.2:28271003-28271022 | None:intergenic | 40.0% | |
GCTGAGTGATTGTACAGTTT+AGG | - | chr2.2:28270399-28270418 | MS.gene84459:intron | 40.0% | |
GCTGAGTTTCGCCATAAATT+TGG | - | chr2.2:28268934-28268953 | MS.gene84459:intron | 40.0% | |
GCTTCAGTCATTCACATTGA+TGG | + | chr2.2:28269907-28269926 | None:intergenic | 40.0% | |
GGAAACGGAAGTTTGATTGT+TGG | + | chr2.2:28273002-28273021 | None:intergenic | 40.0% | |
GGGTCACATTTGTAAAGTTG+AGG | + | chr2.2:28269680-28269699 | None:intergenic | 40.0% | |
GTATGCTTTCAAGGCTGTTA+AGG | - | chr2.2:28267971-28267990 | MS.gene84459:intron | 40.0% | |
GTTTGGTTGTTGATCTGGTT+AGG | - | chr2.2:28273343-28273362 | MS.gene84459:intron | 40.0% | |
TAACTAATTCAGGTAGGGGT+CGG | - | chr2.2:28272780-28272799 | MS.gene84459:intron | 40.0% | |
TACCTATGATGAGACAGTTC+AGG | - | chr2.2:28271560-28271579 | MS.gene84459:intron | 40.0% | |
TACCTGAACTGTCTCATCAT+AGG | + | chr2.2:28271565-28271584 | None:intergenic | 40.0% | |
TATATGAGACCACTAGGAGT+AGG | - | chr2.2:28269477-28269496 | MS.gene84459:intron | 40.0% | |
TCAGTCCCAAAAAACAAGCA+CGG | - | chr2.2:28272956-28272975 | MS.gene84459:intron | 40.0% | |
TGCAAAGTTGCTATGGTCTT+GGG | - | chr2.2:28269635-28269654 | MS.gene84459:intron | 40.0% | |
TGCACTGTCATCAACAATCA+TGG | + | chr2.2:28272740-28272759 | None:intergenic | 40.0% | |
TGTAGTTTCTCTACCTGCAT+GGG | - | chr2.2:28272699-28272718 | MS.gene84459:intron | 40.0% | |
TTGCGTCGTTACTCAGAAAA+AGG | - | chr2.2:28268037-28268056 | MS.gene84459:intron | 40.0% | |
TTGGTTGTTGATCTGGTTAG+GGG | - | chr2.2:28273345-28273364 | MS.gene84459:intron | 40.0% | |
TTTCCCATCACTAAGTACCT+TGG | - | chr2.2:28268186-28268205 | MS.gene84459:intron | 40.0% | |
! | AGATTGGCTCTTTGATAAGG+TGG | - | chr2.2:28272258-28272277 | MS.gene84459:intron | 40.0% |
! | AGGGTTCAATGGATTTGAAG+AGG | - | chr2.2:28273173-28273192 | MS.gene84459:intron | 40.0% |
! | ATTACTATTTTCTCCCCCGA+GGG | - | chr2.2:28267369-28267388 | MS.gene84459:CDS | 40.0% |
! | CCTTACTTTCAAAGCATTCG+AGG | + | chr2.2:28271347-28271366 | None:intergenic | 40.0% |
! | CTAGATTGATAGCTTCGCTA+GGG | + | chr2.2:28271025-28271044 | None:intergenic | 40.0% |
! | TCTAGATTGATAGCTTCGCT+AGG | + | chr2.2:28271026-28271045 | None:intergenic | 40.0% |
! | TGTACAGTTTAGGGGTATGA+TGG | - | chr2.2:28270409-28270428 | MS.gene84459:intron | 40.0% |
! | TTGCAATCTAAGAGCATACG+GGG | + | chr2.2:28269276-28269295 | None:intergenic | 40.0% |
!! | ACTTTCTGGTTTGCATTGCA+CGG | - | chr2.2:28267746-28267765 | MS.gene84459:intron | 40.0% |
!! | ATACTTTGGGTTGAGTTGCA+TGG | + | chr2.2:28268618-28268637 | None:intergenic | 40.0% |
!! | ATTTAGAGTTTTGTCCACCG+AGG | - | chr2.2:28273669-28273688 | MS.gene84459:CDS | 40.0% |
!! | CCTCGAATGCTTTGAAAGTA+AGG | - | chr2.2:28271344-28271363 | MS.gene84459:CDS | 40.0% |
!! | GAAACGGCTTGTTAATTAGG+GGG | - | chr2.2:28268508-28268527 | MS.gene84459:intron | 40.0% |
!! | GGTTCTGGAATTTCGATTGT+TGG | + | chr2.2:28273036-28273055 | None:intergenic | 40.0% |
!! | GTTTGCGATTTGATTTGCGA+TGG | - | chr2.2:28273229-28273248 | MS.gene84459:intron | 40.0% |
!! | TACTTTGGGTTGAGTTGCAT+GGG | + | chr2.2:28268617-28268636 | None:intergenic | 40.0% |
!! | TTGAGTTGCATGGGATTTTG+TGG | + | chr2.2:28268608-28268627 | None:intergenic | 40.0% |
!! | TTGCATTTTCTAGGTTGGAG+TGG | - | chr2.2:28273627-28273646 | MS.gene84459:intron | 40.0% |
!!! | AGGTCAACGGTCCTTTTTTT+GGG | + | chr2.2:28267680-28267699 | None:intergenic | 40.0% |
!!! | ATCGTTCCGTGCTTGTTTTT+TGG | + | chr2.2:28272965-28272984 | None:intergenic | 40.0% |
!!! | GAAGGCTCGTATTTTAACAG+GGG | + | chr2.2:28270580-28270599 | None:intergenic | 40.0% |
!!! | GACAGTCTTTTAGTCTTAGC+TGG | - | chr2.2:28271638-28271657 | MS.gene84459:intron | 40.0% |
!!! | GTGAAGGCTCGTATTTTAAC+AGG | + | chr2.2:28270582-28270601 | None:intergenic | 40.0% |
!!! | GTTTTGGGGTAAGGAAATAG+GGG | - | chr2.2:28272283-28272302 | MS.gene84459:intron | 40.0% |
!!! | TAGGTCAACGGTCCTTTTTT+TGG | + | chr2.2:28267681-28267700 | None:intergenic | 40.0% |
!!! | TCGTTCCGTGCTTGTTTTTT+GGG | + | chr2.2:28272964-28272983 | None:intergenic | 40.0% |
!!! | TTGCGATGGTTTTGTGAAAC+TGG | - | chr2.2:28273243-28273262 | MS.gene84459:intron | 40.0% |
!!! | TTTTAAGGCCACTGAGATTG+AGG | - | chr2.2:28272492-28272511 | MS.gene84459:intron | 40.0% |
AAAAAGGTTCCGGTGAGTAC+AGG | - | chr2.2:28268053-28268072 | MS.gene84459:intron | 45.0% | |
AAATAGGGGTTGGAGTGATG+AGG | - | chr2.2:28272297-28272316 | MS.gene84459:intron | 45.0% | |
AACAATGTGGCTGCTGACAA+AGG | + | chr2.2:28269343-28269362 | None:intergenic | 45.0% | |
ACACGAGACACAAAACGAAC+TGG | + | chr2.2:28272927-28272946 | None:intergenic | 45.0% | |
ACCAATTGAGGTTATCCCTG+CGG | + | chr2.2:28267997-28268016 | None:intergenic | 45.0% | |
ACCATGTTCTCAGTTGTCCT+TGG | - | chr2.2:28271685-28271704 | MS.gene84459:intron | 45.0% | |
AGCTCCATGAATGTGCTTCT+TGG | - | chr2.2:28269212-28269231 | MS.gene84459:intron | 45.0% | |
AGTCAACTTCCTGTACTCAC+CGG | + | chr2.2:28268065-28268084 | None:intergenic | 45.0% | |
ATAGGCTAACAACGGTTGTC+TGG | + | chr2.2:28269056-28269075 | None:intergenic | 45.0% | |
ATAGTTGTGCATGCTGCCTA+TGG | - | chr2.2:28268692-28268711 | MS.gene84459:intron | 45.0% | |
CAATTGCCAACCTAGGTCAA+CGG | + | chr2.2:28267693-28267712 | None:intergenic | 45.0% | |
CATCAGCAGAAGCTAGATAC+TGG | - | chr2.2:28270952-28270971 | MS.gene84459:intron | 45.0% | |
CATTCATGGAGCTCGATTGT+AGG | + | chr2.2:28269205-28269224 | None:intergenic | 45.0% | |
CATTTAGCCAACACATCCAC+AGG | + | chr2.2:28268970-28268989 | None:intergenic | 45.0% | |
CCTAGCATCAGCTGAAAAGA+AGG | + | chr2.2:28268884-28268903 | None:intergenic | 45.0% | |
CGCAAACAGAATCGTTTCCT+CGG | + | chr2.2:28268022-28268041 | None:intergenic | 45.0% | |
CGTCAGAGATTGCAGTGAAA+AGG | + | chr2.2:28269517-28269536 | None:intergenic | 45.0% | |
CTGCAAAGTTGCTATGGTCT+TGG | - | chr2.2:28269634-28269653 | MS.gene84459:intron | 45.0% | |
CTTGTGACCAAAGTAATGCC+CGG | + | chr2.2:28269705-28269724 | None:intergenic | 45.0% | |
CTTTACAAATGTGACCCTGC+CGG | - | chr2.2:28269683-28269702 | MS.gene84459:intron | 45.0% | |
GAAAGAGGGGTGAATCTTAG+AGG | + | chr2.2:28270878-28270897 | None:intergenic | 45.0% | |
GGCGTATGGTAGACAAAGAA+AGG | + | chr2.2:28271004-28271023 | None:intergenic | 45.0% | |
TACCTTGGTTTACTGGCAAC+TGG | - | chr2.2:28268201-28268220 | MS.gene84459:intron | 45.0% | |
TCCAAGGACAACTGAGAACA+TGG | + | chr2.2:28271689-28271708 | None:intergenic | 45.0% | |
TTCATTGCAGGACAAGCTCT+TGG | - | chr2.2:28268140-28268159 | MS.gene84459:intron | 45.0% | |
TTTACAAATGTGACCCTGCC+GGG | - | chr2.2:28269684-28269703 | MS.gene84459:intron | 45.0% | |
! | ACAATTCTAGGGAGATGCCT+AGG | + | chr2.2:28270837-28270856 | None:intergenic | 45.0% |
! | ACAGTTTAGGGGTATGATGG+AGG | - | chr2.2:28270412-28270431 | MS.gene84459:intron | 45.0% |
! | ATAACCTCAATTGGTGTCCG+AGG | - | chr2.2:28268002-28268021 | MS.gene84459:intron | 45.0% |
! | CATTACTATTTTCTCCCCCG+AGG | - | chr2.2:28267368-28267387 | MS.gene84459:CDS | 45.0% |
! | CCTTCTTTTCAGCTGATGCT+AGG | - | chr2.2:28268881-28268900 | MS.gene84459:intron | 45.0% |
! | CTAGGGGTGTGCAAAAGATT+TGG | + | chr2.2:28273374-28273393 | None:intergenic | 45.0% |
! | CTTTTGCACACCCCTAGTAT+TGG | - | chr2.2:28273377-28273396 | MS.gene84459:intron | 45.0% |
! | GTAGCCAAGAAGCACATTCA+TGG | + | chr2.2:28269219-28269238 | None:intergenic | 45.0% |
! | GTATCTAGCTTCTGCTGATG+TGG | + | chr2.2:28270952-28270971 | None:intergenic | 45.0% |
! | TTACTATTTTCTCCCCCGAG+GGG | - | chr2.2:28267370-28267389 | MS.gene84459:CDS | 45.0% |
!! | ATGGGCTGGGCTCTAAAAAA+TGG | - | chr2.2:28273316-28273335 | MS.gene84459:intron | 45.0% |
!! | CACTTAGGGTTGGTTTGGTT+TGG | - | chr2.2:28273281-28273300 | MS.gene84459:intron | 45.0% |
!! | CGTGATAGAAAGAGGGTGTT+TGG | + | chr2.2:28271190-28271209 | None:intergenic | 45.0% |
!! | CTGTGGATGTGTTGGCTAAA+TGG | - | chr2.2:28268968-28268987 | MS.gene84459:intron | 45.0% |
!! | TCTACCTGCATGGGTTTTGA+GGG | - | chr2.2:28272708-28272727 | MS.gene84459:intron | 45.0% |
!!! | AAGGTGGTAGTTTTGGGGTA+AGG | - | chr2.2:28272274-28272293 | MS.gene84459:intron | 45.0% |
AAAGGACCGTTGACCTAGGT+TGG | - | chr2.2:28267684-28267703 | MS.gene84459:intron | 50.0% | |
ATCCTTCGATCCAGCACTTG+TGG | + | chr2.2:28271490-28271509 | None:intergenic | 50.0% | |
CGGGCATTACTTTGGTCACA+AGG | - | chr2.2:28269703-28269722 | MS.gene84459:intron | 50.0% | |
GCTAACAACGGTTGTCTGGA+AGG | + | chr2.2:28269052-28269071 | None:intergenic | 50.0% | |
GGTAGACAAAGAAAGGGGAG+CGG | + | chr2.2:28270997-28271016 | None:intergenic | 50.0% | |
GGTGAATCTTAGAGGCCAGT+TGG | + | chr2.2:28270870-28270889 | None:intergenic | 50.0% | |
GGTTTGCATTGCACGGAAGT+TGG | - | chr2.2:28267753-28267772 | MS.gene84459:intron | 50.0% | |
GTTTCCTCGGACACCAATTG+AGG | + | chr2.2:28268009-28268028 | None:intergenic | 50.0% | |
TGAGATGCCTGTGGATGTGT+TGG | - | chr2.2:28268960-28268979 | MS.gene84459:intron | 50.0% | |
TGCCAGTTGCCAGTAAACCA+AGG | + | chr2.2:28268206-28268225 | None:intergenic | 50.0% | |
TGCCTAGGCACATCTCTCAA+AGG | + | chr2.2:28270822-28270841 | None:intergenic | 50.0% | |
TGCTGGATCGAAGGATCAAG+AGG | - | chr2.2:28271494-28271513 | MS.gene84459:intron | 50.0% | |
TGGGGTAAGGAAATAGGGGT+TGG | - | chr2.2:28272287-28272306 | MS.gene84459:intron | 50.0% | |
TTACTGGCAACTGGCATGAC+AGG | - | chr2.2:28268210-28268229 | MS.gene84459:intron | 50.0% | |
TTCAGCTGATGCTAGGACAC+TGG | - | chr2.2:28268888-28268907 | MS.gene84459:intron | 50.0% | |
! | CTAGGTTGGAGTGGTGCAAA+AGG | - | chr2.2:28273636-28273655 | MS.gene84459:intron | 50.0% |
! | CTCTACCTGCATGGGTTTTG+AGG | - | chr2.2:28272707-28272726 | MS.gene84459:intron | 50.0% |
! | GCCATGTCGGTACTGAAGAT+TGG | - | chr2.2:28272242-28272261 | MS.gene84459:intron | 50.0% |
!! | CAAGTGCTCGTCGATTTCCT+CGG | + | chr2.2:28273689-28273708 | None:intergenic | 50.0% |
!! | GAGGGGAATGCTGGTTTCAA+GGG | + | chr2.2:28269155-28269174 | None:intergenic | 50.0% |
!! | GCCAATCTTCAGTACCGACA+TGG | + | chr2.2:28272246-28272265 | None:intergenic | 50.0% |
!! | TGAGGGGAATGCTGGTTTCA+AGG | + | chr2.2:28269156-28269175 | None:intergenic | 50.0% |
AATTCAGGTAGGGGTCGGCA+TGG | - | chr2.2:28272785-28272804 | MS.gene84459:intron | 55.0% | |
ACTTGAAAGAGACGCCCCTC+GGG | + | chr2.2:28267387-28267406 | None:intergenic | 55.0% | |
ATGAGTCGAGGAAGTGGAGG+TGG | - | chr2.2:28267333-28267352 | MS.gene84459:CDS | 55.0% | |
CACTTGAAAGAGACGCCCCT+CGG | + | chr2.2:28267388-28267407 | None:intergenic | 55.0% | |
CTAGCTTCTGCTGATGTGGC+AGG | + | chr2.2:28270948-28270967 | None:intergenic | 55.0% | |
GACCAAAGTAATGCCCGGCA+GGG | + | chr2.2:28269700-28269719 | None:intergenic | 55.0% | |
GATAGCTTCGCTAGGGCGTA+TGG | + | chr2.2:28271018-28271037 | None:intergenic | 55.0% | |
GCCGCAGGGATAACCTCAAT+TGG | - | chr2.2:28267993-28268012 | MS.gene84459:intron | 55.0% | |
TAGGGGTTGGAGTGATGAGG+AGG | - | chr2.2:28272300-28272319 | MS.gene84459:intron | 55.0% | |
TCAAGGCTGTTAAGGCCGCA+GGG | - | chr2.2:28267979-28267998 | MS.gene84459:intron | 55.0% | |
TGACCAAAGTAATGCCCGGC+AGG | + | chr2.2:28269701-28269720 | None:intergenic | 55.0% | |
TGTACTCAGGCCACAAGTGC+TGG | - | chr2.2:28271477-28271496 | MS.gene84459:intron | 55.0% | |
TTCAAGGCTGTTAAGGCCGC+AGG | - | chr2.2:28267978-28267997 | MS.gene84459:intron | 55.0% | |
! | GGCCTTTGAGAGATGTGCCT+AGG | - | chr2.2:28270817-28270836 | MS.gene84459:intron | 55.0% |
!! | GAGGGGCGTCTCTTTCAAGT+GGG | - | chr2.2:28267387-28267406 | MS.gene84459:CDS | 55.0% |
!!! | ACCTGCATGGGTTTTGAGGG+AGG | - | chr2.2:28272711-28272730 | MS.gene84459:intron | 55.0% |
!!! | CCTGCATGGGTTTTGAGGGA+GGG | - | chr2.2:28272712-28272731 | MS.gene84459:intron | 55.0% |
AGGTAGGGGTCGGCATGGTT+TGG | - | chr2.2:28272790-28272809 | MS.gene84459:intron | 60.0% | |
CCCTCCCTCAAAACCCATGC+AGG | + | chr2.2:28272715-28272734 | None:intergenic | 60.0% | |
CTTGAAAGAGACGCCCCTCG+GGG | + | chr2.2:28267386-28267405 | None:intergenic | 60.0% | |
GACCCTGCCGGGCATTACTT+TGG | - | chr2.2:28269695-28269714 | MS.gene84459:intron | 60.0% | |
GCTTCTGCTGATGTGGCAGG+AGG | + | chr2.2:28270945-28270964 | None:intergenic | 60.0% | |
TTGAAAGAGACGCCCCTCGG+GGG | + | chr2.2:28267385-28267404 | None:intergenic | 60.0% | |
! | CTGATGTGGCAGGAGGTGTG+TGG | + | chr2.2:28270938-28270957 | None:intergenic | 60.0% |
!! | CGAGGGGCGTCTCTTTCAAG+TGG | - | chr2.2:28267386-28267405 | MS.gene84459:CDS | 60.0% |
!! | GGCCACAAGTGCTGGATCGA+AGG | - | chr2.2:28271485-28271504 | MS.gene84459:intron | 60.0% |
!! | GTGCTCGTCGATTTCCTCGG+TGG | + | chr2.2:28273686-28273705 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 28267333 | 28273732 | 28267333 | ID=MS.gene84459 |
chr2.2 | mRNA | 28267333 | 28273732 | 28267333 | ID=MS.gene84459.t1;Parent=MS.gene84459 |
chr2.2 | exon | 28273657 | 28273732 | 28273657 | ID=MS.gene84459.t1.exon1;Parent=MS.gene84459.t1 |
chr2.2 | CDS | 28273657 | 28273732 | 28273657 | ID=cds.MS.gene84459.t1;Parent=MS.gene84459.t1 |
chr2.2 | exon | 28273001 | 28273095 | 28273001 | ID=MS.gene84459.t1.exon2;Parent=MS.gene84459.t1 |
chr2.2 | CDS | 28273001 | 28273095 | 28273001 | ID=cds.MS.gene84459.t1;Parent=MS.gene84459.t1 |
chr2.2 | exon | 28272834 | 28272915 | 28272834 | ID=MS.gene84459.t1.exon3;Parent=MS.gene84459.t1 |
chr2.2 | CDS | 28272834 | 28272915 | 28272834 | ID=cds.MS.gene84459.t1;Parent=MS.gene84459.t1 |
chr2.2 | exon | 28272076 | 28272172 | 28272076 | ID=MS.gene84459.t1.exon4;Parent=MS.gene84459.t1 |
chr2.2 | CDS | 28272076 | 28272172 | 28272076 | ID=cds.MS.gene84459.t1;Parent=MS.gene84459.t1 |
chr2.2 | exon | 28271567 | 28271625 | 28271567 | ID=MS.gene84459.t1.exon5;Parent=MS.gene84459.t1 |
chr2.2 | CDS | 28271567 | 28271625 | 28271567 | ID=cds.MS.gene84459.t1;Parent=MS.gene84459.t1 |
chr2.2 | exon | 28271341 | 28271423 | 28271341 | ID=MS.gene84459.t1.exon6;Parent=MS.gene84459.t1 |
chr2.2 | CDS | 28271341 | 28271423 | 28271341 | ID=cds.MS.gene84459.t1;Parent=MS.gene84459.t1 |
chr2.2 | exon | 28269484 | 28269579 | 28269484 | ID=MS.gene84459.t1.exon7;Parent=MS.gene84459.t1 |
chr2.2 | CDS | 28269484 | 28269579 | 28269484 | ID=cds.MS.gene84459.t1;Parent=MS.gene84459.t1 |
chr2.2 | exon | 28268552 | 28268611 | 28268552 | ID=MS.gene84459.t1.exon8;Parent=MS.gene84459.t1 |
chr2.2 | CDS | 28268552 | 28268611 | 28268552 | ID=cds.MS.gene84459.t1;Parent=MS.gene84459.t1 |
chr2.2 | exon | 28267333 | 28267425 | 28267333 | ID=MS.gene84459.t1.exon9;Parent=MS.gene84459.t1 |
chr2.2 | CDS | 28267333 | 28267425 | 28267333 | ID=cds.MS.gene84459.t1;Parent=MS.gene84459.t1 |
Gene Sequence |
Protein sequence |