Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066738.t1 | XP_003595788.1 | 100 | 246 | 0 | 0 | 1 | 246 | 1 | 246 | 1.30E-135 | 492.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066738.t1 | O48551 | 93.5 | 246 | 16 | 0 | 1 | 246 | 1 | 246 | 2.1e-129 | 463.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066738.t1 | G7IJ13 | 100.0 | 246 | 0 | 0 | 1 | 246 | 1 | 246 | 9.6e-136 | 492.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066738.t1 | MTR_2g060830 | 100.000 | 246 | 0 | 0 | 1 | 246 | 1 | 246 | 0.0 | 512 |
MS.gene066738.t1 | MTR_8g464460 | 93.496 | 246 | 16 | 0 | 1 | 246 | 1 | 246 | 3.14e-175 | 482 |
MS.gene066738.t1 | MTR_0167s0060 | 38.961 | 231 | 136 | 4 | 9 | 239 | 6 | 231 | 1.31e-51 | 168 |
MS.gene066738.t1 | MTR_7g070070 | 37.815 | 238 | 136 | 6 | 9 | 239 | 5 | 237 | 3.04e-42 | 144 |
MS.gene066738.t1 | MTR_8g075320 | 39.394 | 231 | 128 | 7 | 9 | 236 | 4 | 225 | 7.25e-41 | 140 |
MS.gene066738.t1 | MTR_5g016590 | 36.975 | 238 | 138 | 6 | 9 | 239 | 5 | 237 | 1.17e-40 | 140 |
MS.gene066738.t1 | MTR_2g016050 | 38.393 | 224 | 126 | 5 | 1 | 223 | 1 | 213 | 2.26e-39 | 137 |
MS.gene066738.t1 | MTR_1g112250 | 32.900 | 231 | 145 | 5 | 9 | 236 | 8 | 231 | 9.79e-39 | 135 |
MS.gene066738.t1 | MTR_1g022410 | 34.348 | 230 | 145 | 5 | 9 | 237 | 6 | 230 | 1.27e-38 | 136 |
MS.gene066738.t1 | MTR_6g024135 | 35.227 | 176 | 112 | 2 | 6 | 181 | 5 | 178 | 3.00e-32 | 118 |
MS.gene066738.t1 | MTR_4g012740 | 27.239 | 268 | 151 | 7 | 9 | 237 | 237 | 499 | 1.68e-22 | 96.3 |
MS.gene066738.t1 | MTR_4g057090 | 25.688 | 218 | 142 | 5 | 12 | 220 | 91 | 297 | 1.19e-15 | 75.5 |
MS.gene066738.t1 | MTR_3g113730 | 32.174 | 115 | 75 | 3 | 124 | 237 | 4 | 116 | 3.85e-12 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066738.t1 | AT5G35590 | 86.585 | 246 | 33 | 0 | 1 | 246 | 1 | 246 | 1.17e-166 | 460 |
MS.gene066738.t1 | AT2G05840 | 87.805 | 246 | 30 | 0 | 1 | 246 | 1 | 246 | 1.21e-166 | 460 |
MS.gene066738.t1 | AT2G05840 | 88.940 | 217 | 24 | 0 | 1 | 217 | 1 | 217 | 2.07e-149 | 416 |
MS.gene066738.t1 | AT2G05840 | 86.935 | 199 | 26 | 0 | 1 | 199 | 1 | 199 | 2.44e-134 | 377 |
MS.gene066738.t1 | AT1G16470 | 37.179 | 234 | 142 | 4 | 9 | 242 | 6 | 234 | 1.93e-48 | 160 |
MS.gene066738.t1 | AT1G16470 | 37.179 | 234 | 142 | 4 | 9 | 242 | 6 | 234 | 1.93e-48 | 160 |
MS.gene066738.t1 | AT1G79210 | 37.179 | 234 | 142 | 4 | 9 | 242 | 6 | 234 | 3.49e-48 | 159 |
MS.gene066738.t1 | AT1G79210 | 37.179 | 234 | 142 | 4 | 9 | 242 | 6 | 234 | 3.49e-48 | 159 |
MS.gene066738.t1 | AT1G79210 | 37.179 | 234 | 142 | 4 | 9 | 242 | 6 | 234 | 3.49e-48 | 159 |
MS.gene066738.t1 | AT3G51260 | 38.528 | 231 | 131 | 6 | 9 | 236 | 4 | 226 | 5.60e-43 | 146 |
MS.gene066738.t1 | AT5G66140 | 38.095 | 231 | 132 | 6 | 9 | 236 | 4 | 226 | 6.10e-43 | 146 |
MS.gene066738.t1 | AT3G51260 | 38.679 | 212 | 121 | 5 | 9 | 217 | 4 | 209 | 2.45e-40 | 139 |
MS.gene066738.t1 | AT1G53850 | 33.766 | 231 | 143 | 5 | 9 | 236 | 8 | 231 | 5.26e-40 | 138 |
MS.gene066738.t1 | AT1G53850 | 33.766 | 231 | 143 | 5 | 9 | 236 | 8 | 231 | 5.26e-40 | 138 |
MS.gene066738.t1 | AT3G22110 | 38.191 | 199 | 119 | 3 | 9 | 206 | 5 | 200 | 1.10e-39 | 137 |
MS.gene066738.t1 | AT3G14290 | 33.333 | 231 | 144 | 5 | 9 | 236 | 8 | 231 | 1.37e-39 | 137 |
MS.gene066738.t1 | AT1G47250 | 37.391 | 230 | 134 | 7 | 9 | 235 | 6 | 228 | 6.39e-39 | 136 |
MS.gene066738.t1 | AT5G42790 | 36.522 | 230 | 136 | 7 | 9 | 235 | 6 | 228 | 2.94e-38 | 135 |
MS.gene066738.t1 | AT2G27020 | 33.333 | 186 | 116 | 4 | 6 | 185 | 5 | 188 | 3.18e-30 | 113 |
MS.gene066738.t1 | AT2G27020 | 33.514 | 185 | 115 | 4 | 6 | 184 | 107 | 289 | 2.88e-29 | 113 |
MS.gene066738.t1 | AT4G15165 | 32.161 | 199 | 89 | 5 | 9 | 206 | 5 | 158 | 5.46e-24 | 95.9 |
Find 67 sgRNAs with CRISPR-Local
Find 386 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTGAGTTTCGCCATAAATT+TGG | 0.187140 | 2.2:+28278515 | MS.gene066738:CDS |
CACTAAGTACCTTGGTTTAC+TGG | 0.207612 | 2.2:+28277775 | MS.gene066738:CDS |
GCATCTCATATCCAAATTTA+TGG | 0.224828 | 2.2:-28278526 | None:intergenic |
TCAAGAGGCAATTAATTTCT+TGG | 0.230260 | 2.2:+28281090 | MS.gene066738:CDS |
TTGGGAATTGATGACGAAAA+TGG | 0.280211 | 2.2:+28279234 | MS.gene066738:CDS |
TTGCGTCGTTACTCAGAAAA+AGG | 0.297194 | 2.2:+28277618 | MS.gene066738:CDS |
CTGTGGATGTGTTGGCTAAA+TGG | 0.320318 | 2.2:+28278549 | MS.gene066738:CDS |
GTTAACAGAGTATGCTTTCA+AGG | 0.381831 | 2.2:+28277543 | MS.gene066738:intron |
TACCTTGGTTTACTGGCAAC+TGG | 0.402138 | 2.2:+28277782 | MS.gene066738:CDS |
CTGCAAAGTTGCTATGGTCT+TGG | 0.414875 | 2.2:+28279215 | MS.gene066738:intron |
TTCAAGGCTGTTAAGGCCGC+AGG | 0.422354 | 2.2:+28277559 | MS.gene066738:CDS |
TACCTATGATGAGACAGTTC+AGG | 0.429803 | 2.2:+28281141 | MS.gene066738:CDS |
TTCATTGCAGGACAAGCTCT+TGG | 0.434795 | 2.2:+28277721 | MS.gene066738:intron |
TGCAAAGTTGCTATGGTCTT+GGG | 0.454919 | 2.2:+28279216 | MS.gene066738:intron |
GTGGACAAAACTCTAAATTC+TGG | 0.455023 | 2.2:-28283245 | None:intergenic |
TTCAGCTGATGCTAGGACAC+TGG | 0.456415 | 2.2:+28278469 | MS.gene066738:intron |
TGTACTCAGGCCACAAGTGC+TGG | 0.456634 | 2.2:+28281058 | MS.gene066738:intron |
TGGGAATTGATGACGAAAAT+GGG | 0.457659 | 2.2:+28279235 | MS.gene066738:CDS |
GACCCTGCCGGGCATTACTT+TGG | 0.459387 | 2.2:+28279276 | MS.gene066738:CDS |
TGACCAAAGTAATGCCCGGC+AGG | 0.467216 | 2.2:-28279279 | None:intergenic |
GTCTCATCATAGGTAAATGA+AGG | 0.468541 | 2.2:-28281133 | None:intergenic |
ACTTGAAAGAGACGCCCCTC+GGG | 0.470636 | 2.2:-28276966 | None:intergenic |
GTATGCTTTCAAGGCTGTTA+AGG | 0.473677 | 2.2:+28277552 | MS.gene066738:CDS |
CTAGGTTGGAGTGGTGCAAA+AGG | 0.481357 | 2.2:+28283217 | MS.gene066738:intron |
ATCCTTCGATCCAGCACTTG+TGG | 0.485211 | 2.2:-28281068 | None:intergenic |
GCCGCAGGGATAACCTCAAT+TGG | 0.487617 | 2.2:+28277574 | MS.gene066738:CDS |
TTTACAAATGTGACCCTGCC+GGG | 0.490064 | 2.2:+28279265 | MS.gene066738:CDS |
AACTCAATCGCGCTCGCTGA+TGG | 0.493385 | 2.2:-28283294 | None:intergenic |
TTTCCCATCACTAAGTACCT+TGG | 0.495984 | 2.2:+28277767 | MS.gene066738:CDS |
TACCTGAACTGTCTCATCAT+AGG | 0.502050 | 2.2:-28281143 | None:intergenic |
GTTTCCTCGGACACCAATTG+AGG | 0.514352 | 2.2:-28277587 | None:intergenic |
CTTTACAAATGTGACCCTGC+CGG | 0.517868 | 2.2:+28279264 | MS.gene066738:CDS |
TTACTGGCAACTGGCATGAC+AGG | 0.518842 | 2.2:+28277791 | MS.gene066738:CDS |
CACTTGAAAGAGACGCCCCT+CGG | 0.521556 | 2.2:-28276967 | None:intergenic |
CTTGCAATCAGTTCTTCAAG+AGG | 0.529591 | 2.2:+28282049 | MS.gene066738:CDS |
ATAAACATGAGTCGAGGAAG+TGG | 0.531301 | 2.2:+28276909 | None:intergenic |
ATGAGTCGAGGAAGTGGAGG+TGG | 0.536279 | 2.2:+28276915 | MS.gene066738:CDS |
CGAGGGGCGTCTCTTTCAAG+TGG | 0.547448 | 2.2:+28276968 | MS.gene066738:CDS |
CGCAAACAGAATCGTTTCCT+CGG | 0.548376 | 2.2:-28277600 | None:intergenic |
GGCCACAAGTGCTGGATCGA+AGG | 0.550812 | 2.2:+28281066 | MS.gene066738:intron |
TAAACCAAGGTACTTAGTGA+TGG | 0.555581 | 2.2:-28277771 | None:intergenic |
CTCTTGAAGAACTGATTGCA+AGG | 0.559622 | 2.2:-28282048 | None:intergenic |
AAACCAAGGTACTTAGTGAT+GGG | 0.562271 | 2.2:-28277770 | None:intergenic |
CATTTAGCCAACACATCCAC+AGG | 0.565773 | 2.2:-28278548 | None:intergenic |
CATGCTTATATGAGACCACT+AGG | 0.569233 | 2.2:+28279052 | MS.gene066738:CDS |
CAAGTGCTCGTCGATTTCCT+CGG | 0.572807 | 2.2:-28283267 | None:intergenic |
CGGGCATTACTTTGGTCACA+AGG | 0.578471 | 2.2:+28279284 | MS.gene066738:CDS |
GGGTCACATTTGTAAAGTTG+AGG | 0.580213 | 2.2:-28279258 | None:intergenic |
TGCTGGATCGAAGGATCAAG+AGG | 0.587729 | 2.2:+28281075 | MS.gene066738:CDS |
ATTGTGCTGCAAAGTTGCTA+TGG | 0.590145 | 2.2:+28279209 | MS.gene066738:intron |
CTTGTGACCAAAGTAATGCC+CGG | 0.591715 | 2.2:-28279283 | None:intergenic |
TGAGATGCCTGTGGATGTGT+TGG | 0.595670 | 2.2:+28278541 | MS.gene066738:CDS |
TATATGAGACCACTAGGAGT+AGG | 0.613786 | 2.2:+28279058 | MS.gene066738:CDS |
GACCAAAGTAATGCCCGGCA+GGG | 0.621604 | 2.2:-28279278 | None:intergenic |
GTGCTCGTCGATTTCCTCGG+TGG | 0.630932 | 2.2:-28283264 | None:intergenic |
AACATGAGTCGAGGAAGTGG+AGG | 0.632274 | 2.2:+28276912 | None:intergenic |
TCAAGGCTGTTAAGGCCGCA+GGG | 0.635784 | 2.2:+28277560 | MS.gene066738:CDS |
GAGGGGCGTCTCTTTCAAGT+GGG | 0.638985 | 2.2:+28276969 | MS.gene066738:CDS |
TCTCATCATAGGTAAATGAA+GGG | 0.646694 | 2.2:-28281132 | None:intergenic |
ATAACCTCAATTGGTGTCCG+AGG | 0.651433 | 2.2:+28277583 | MS.gene066738:CDS |
TTGAAAGAGACGCCCCTCGG+GGG | 0.652662 | 2.2:-28276964 | None:intergenic |
CTTGAAAGAGACGCCCCTCG+GGG | 0.667484 | 2.2:-28276965 | None:intergenic |
TAATATATAAACATGAGTCG+AGG | 0.668937 | 2.2:+28276903 | None:intergenic |
TGCCAGTTGCCAGTAAACCA+AGG | 0.669415 | 2.2:-28277784 | None:intergenic |
ACCAATTGAGGTTATCCCTG+CGG | 0.697474 | 2.2:-28277575 | None:intergenic |
AAATTATACCTCAATCTCAG+TGG | 0.698073 | 2.2:-28282081 | None:intergenic |
ATTTGGATATGAGATGCCTG+TGG | 0.719306 | 2.2:+28278532 | MS.gene066738:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTAAATATGATAAAAGTT+GGG | - | chr2.2:28281501-28281520 | None:intergenic | 10.0% |
!! | ACATTATTATGAATTTATAA+TGG | - | chr2.2:28280114-28280133 | None:intergenic | 10.0% |
!! | ATTCAAAATTAAAACAAAAT+GGG | - | chr2.2:28277101-28277120 | None:intergenic | 10.0% |
!! | TAATATATTAATCATACTTT+GGG | - | chr2.2:28278212-28278231 | None:intergenic | 10.0% |
!! | TAATTAAATATGATAAAAGT+TGG | - | chr2.2:28281502-28281521 | None:intergenic | 10.0% |
!! | TTAATATATTAATCATACTT+TGG | - | chr2.2:28278213-28278232 | None:intergenic | 10.0% |
!!! | ACTCTTTATTTTAATTATTT+AGG | + | chr2.2:28282160-28282179 | MS.gene066738:intron | 10.0% |
!!! | TATTTTTTTGCTTATAATTT+GGG | - | chr2.2:28281441-28281460 | None:intergenic | 10.0% |
!! | AAGGATGAAATAAAAAATTT+AGG | - | chr2.2:28280189-28280208 | None:intergenic | 15.0% |
!! | ACATATACAAATTGAAATTT+CGG | + | chr2.2:28282654-28282673 | MS.gene066738:intron | 15.0% |
!! | ATGAAATAAAAAATTTAGGT+GGG | - | chr2.2:28280185-28280204 | None:intergenic | 15.0% |
!! | ATTAAATATGATAAAAGTTG+GGG | - | chr2.2:28281500-28281519 | None:intergenic | 15.0% |
!! | CATCTAGTAAAATATAAATT+AGG | + | chr2.2:28278043-28278062 | MS.gene066738:intron | 15.0% |
!! | CATTCAAAATTAAAACAAAA+TGG | - | chr2.2:28277102-28277121 | None:intergenic | 15.0% |
!! | TACTCTAATAGAATAAATAA+TGG | - | chr2.2:28279539-28279558 | None:intergenic | 15.0% |
!! | TCTGAATAAAAAAAAAATCA+AGG | - | chr2.2:28282016-28282035 | None:intergenic | 15.0% |
!!! | ATAGAATAAATAATGGAATA+TGG | - | chr2.2:28279532-28279551 | None:intergenic | 15.0% |
!!! | ATCTAGAGATTTTAATTAAA+TGG | + | chr2.2:28280620-28280639 | MS.gene066738:intron | 15.0% |
!!! | ATTAGTTGTTATTTTATTAG+TGG | - | chr2.2:28281925-28281944 | None:intergenic | 15.0% |
!!! | ATTTCTTTTGCTTATAATTT+GGG | + | chr2.2:28281723-28281742 | MS.gene066738:intron | 15.0% |
!!! | GTATTTTTTGCTTATAATTT+GGG | - | chr2.2:28281478-28281497 | None:intergenic | 15.0% |
!!! | GTATTTTTTTGCTTATAATT+TGG | - | chr2.2:28281442-28281461 | None:intergenic | 15.0% |
!!! | GTTTGGTTATTTTATTAAAT+GGG | + | chr2.2:28282879-28282898 | MS.gene066738:intron | 15.0% |
!!! | TTAGTTGTTATTTTATTAGT+GGG | - | chr2.2:28281924-28281943 | None:intergenic | 15.0% |
!!! | TTTGCATTTAATTTCTTTTT+GGG | - | chr2.2:28281551-28281570 | None:intergenic | 15.0% |
!!! | TTTGTTTTAATTTTGAATGT+GGG | + | chr2.2:28277103-28277122 | MS.gene066738:intron | 15.0% |
!!! | TTTTAATCATTCATACAAAT+AGG | - | chr2.2:28278706-28278725 | None:intergenic | 15.0% |
!!! | TTTTGCATTTAATTTCTTTT+TGG | - | chr2.2:28281552-28281571 | None:intergenic | 15.0% |
!!! | TTTTGTTTTAATTTTGAATG+TGG | + | chr2.2:28277102-28277121 | MS.gene066738:intron | 15.0% |
!! | AAAAGTTATTTATACAAGTG+TGG | + | chr2.2:28280709-28280728 | MS.gene066738:intron | 20.0% |
!! | AAATGAACAAACCAAATAAT+AGG | + | chr2.2:28282406-28282425 | MS.gene066738:intron | 20.0% |
!! | AAATTGCAAATAAAAGACAA+AGG | - | chr2.2:28280208-28280227 | None:intergenic | 20.0% |
!! | ACATCATGATAATTGAAATT+TGG | + | chr2.2:28282130-28282149 | MS.gene066738:intron | 20.0% |
!! | AGATGATTAATAACTAATTC+AGG | + | chr2.2:28282351-28282370 | MS.gene066738:intron | 20.0% |
!! | AGTAATTGTAATTTCACTTA+GGG | + | chr2.2:28282735-28282754 | MS.gene066738:intron | 20.0% |
!! | ATATATCATAGTTCAACTTA+TGG | - | chr2.2:28278359-28278378 | None:intergenic | 20.0% |
!! | ATCCCAAATAAAAAATAGAT+GGG | - | chr2.2:28278161-28278180 | None:intergenic | 20.0% |
!! | ATTAATAACTAATTCAGGTA+GGG | + | chr2.2:28282356-28282375 | MS.gene066738:intron | 20.0% |
!! | CAAAATAAATTTGACTCAAA+TGG | - | chr2.2:28282447-28282466 | None:intergenic | 20.0% |
!! | CAATTTGTATATGTATATCT+TGG | - | chr2.2:28282648-28282667 | None:intergenic | 20.0% |
!! | CATTATTATAATACATCTGT+TGG | + | chr2.2:28278880-28278899 | MS.gene066738:intron | 20.0% |
!! | GATGAAATAAAAAATTTAGG+TGG | - | chr2.2:28280186-28280205 | None:intergenic | 20.0% |
!! | GTAATTACACATATTATTGA+GGG | - | chr2.2:28278754-28278773 | None:intergenic | 20.0% |
!! | TAATTACACATATTATTGAG+GGG | - | chr2.2:28278753-28278772 | None:intergenic | 20.0% |
!! | TAGTTATAGAGAAAATGAAA+GGG | - | chr2.2:28281592-28281611 | None:intergenic | 20.0% |
!! | TCATACATATATGATATGTA+TGG | + | chr2.2:28280800-28280819 | MS.gene066738:intron | 20.0% |
!! | TTAAAAACAAAAAAGTTCCA+AGG | - | chr2.2:28281286-28281305 | None:intergenic | 20.0% |
!! | TTAGTTATAGAGAAAATGAA+AGG | - | chr2.2:28281593-28281612 | None:intergenic | 20.0% |
!!! | ACAACTTCTTCTTTTTTTTT+TGG | - | chr2.2:28279813-28279832 | None:intergenic | 20.0% |
!!! | ATTATTTGGTTTGTTCATTT+AGG | - | chr2.2:28282406-28282425 | None:intergenic | 20.0% |
!!! | GAAATTTTCATTTGAAAGTT+AGG | + | chr2.2:28283113-28283132 | MS.gene066738:intron | 20.0% |
!!! | GACTATCTAAATTGATTTTA+AGG | + | chr2.2:28277198-28277217 | MS.gene066738:intron | 20.0% |
!!! | GATTTCTTTTGCTTATAATT+TGG | + | chr2.2:28281722-28281741 | MS.gene066738:intron | 20.0% |
!!! | GGTATTTTTTGCTTATAATT+TGG | - | chr2.2:28281479-28281498 | None:intergenic | 20.0% |
!!! | GGTTTGGTTATTTTATTAAA+TGG | + | chr2.2:28282878-28282897 | MS.gene066738:intron | 20.0% |
!!! | GTTAACATCAATCTAAAATT+GGG | + | chr2.2:28277361-28277380 | MS.gene066738:intron | 20.0% |
!!! | TAGTTGTTATTTTATTAGTG+GGG | - | chr2.2:28281923-28281942 | None:intergenic | 20.0% |
!!! | TGGAACTTTTTTGTTTTTAA+GGG | + | chr2.2:28281286-28281305 | MS.gene066738:intron | 20.0% |
!!! | TGTTAACATCAATCTAAAAT+TGG | + | chr2.2:28277360-28277379 | MS.gene066738:intron | 20.0% |
!!! | TTGGAACTTTTTTGTTTTTA+AGG | + | chr2.2:28281285-28281304 | MS.gene066738:intron | 20.0% |
!!! | TTTTATCTCGCATTAATAAA+AGG | + | chr2.2:28279951-28279970 | MS.gene066738:intron | 20.0% |
! | AAAATAGTTGCCAAAAAAAG+AGG | - | chr2.2:28281388-28281407 | None:intergenic | 25.0% |
! | AAACCTGATATTATCTGAAA+CGG | + | chr2.2:28278073-28278092 | MS.gene066738:intron | 25.0% |
! | AAATAGTTGCCAAAAAAAGA+GGG | - | chr2.2:28281387-28281406 | None:intergenic | 25.0% |
! | AAATCATAATAGGCTAACAA+CGG | - | chr2.2:28278645-28278664 | None:intergenic | 25.0% |
! | AACAAACCAAATAATAGGTT+TGG | + | chr2.2:28282411-28282430 | MS.gene066738:intron | 25.0% |
! | AATAAAAGAATTACATGCAG+TGG | - | chr2.2:28278825-28278844 | None:intergenic | 25.0% |
! | AATAAGCTGAAAACAACTTA+TGG | + | chr2.2:28280680-28280699 | MS.gene066738:intron | 25.0% |
! | ATAAAAGAATTACATGCAGT+GGG | - | chr2.2:28278824-28278843 | None:intergenic | 25.0% |
! | ATGCAAGAAAATGATAAACT+AGG | + | chr2.2:28280377-28280396 | MS.gene066738:intron | 25.0% |
! | ATGTATATCTTGGATTTGAT+TGG | - | chr2.2:28282638-28282657 | None:intergenic | 25.0% |
! | CAAAAAAAGAGGGAAAATAA+GGG | - | chr2.2:28281377-28281396 | None:intergenic | 25.0% |
! | CAAGTATAGACTATAGATAA+TGG | + | chr2.2:28278320-28278339 | MS.gene066738:intron | 25.0% |
! | CATCCCAAATAAAAAATAGA+TGG | - | chr2.2:28278162-28278181 | None:intergenic | 25.0% |
! | CATTATCTATAGTCTATACT+TGG | - | chr2.2:28278322-28278341 | None:intergenic | 25.0% |
! | CGCAAAAATAATAGAGAAAA+AGG | - | chr2.2:28279672-28279691 | None:intergenic | 25.0% |
! | CGTAATTACACATATTATTG+AGG | - | chr2.2:28278755-28278774 | None:intergenic | 25.0% |
! | GAATTTGTAAGACAATTCTA+GGG | - | chr2.2:28280429-28280448 | None:intergenic | 25.0% |
! | GAGTAATTGTAATTTCACTT+AGG | + | chr2.2:28282734-28282753 | MS.gene066738:intron | 25.0% |
! | GATGTTTCCTAAATCATAAT+AGG | - | chr2.2:28278655-28278674 | None:intergenic | 25.0% |
! | GATTAATAACTAATTCAGGT+AGG | + | chr2.2:28282355-28282374 | MS.gene066738:intron | 25.0% |
! | GTTCAAAAGTTATCACAAAA+TGG | - | chr2.2:28279609-28279628 | None:intergenic | 25.0% |
! | TAAAATGCTGTGTAAATCTT+TGG | - | chr2.2:28277414-28277433 | None:intergenic | 25.0% |
! | TAATGTAAAAGAAGATCAAG+AGG | - | chr2.2:28281192-28281211 | None:intergenic | 25.0% |
! | TCTGTAATCATATATCTAGT+TGG | - | chr2.2:28278299-28278318 | None:intergenic | 25.0% |
! | TCTTCATGTTTGAATGTAAA+TGG | + | chr2.2:28283178-28283197 | MS.gene066738:intron | 25.0% |
! | TGAAAACCAAACCTATTATT+TGG | - | chr2.2:28282420-28282439 | None:intergenic | 25.0% |
! | TGTTGTATATAACAGAAAGA+GGG | - | chr2.2:28280473-28280492 | None:intergenic | 25.0% |
! | TTAATAACTAATTCAGGTAG+GGG | + | chr2.2:28282357-28282376 | MS.gene066738:intron | 25.0% |
! | TTAGGAATGATTAAAATTCG+TGG | + | chr2.2:28283131-28283150 | MS.gene066738:intron | 25.0% |
! | TTGTTGTATATAACAGAAAG+AGG | - | chr2.2:28280474-28280493 | None:intergenic | 25.0% |
! | TTTCCTGTTAAAGTTAATAC+AGG | + | chr2.2:28277900-28277919 | MS.gene066738:intron | 25.0% |
! | TTTCTATGAAACTTATTCCA+AGG | + | chr2.2:28281639-28281658 | MS.gene066738:intron | 25.0% |
!! | AACCATTTTATAACAGCTTT+TGG | - | chr2.2:28279722-28279741 | None:intergenic | 25.0% |
!! | ACATGAAGAAAAACACTTTT+TGG | - | chr2.2:28283167-28283186 | None:intergenic | 25.0% |
!! | ACCATTTTATAACAGCTTTT+GGG | - | chr2.2:28279721-28279740 | None:intergenic | 25.0% |
!! | AGGAATTGGTTTAGTATAAA+AGG | + | chr2.2:28280247-28280266 | MS.gene066738:intron | 25.0% |
!! | ATTGATTTATTCACACTTTC+TGG | + | chr2.2:28277313-28277332 | MS.gene066738:intron | 25.0% |
!! | CTCTAAAAAATGGAATTGTT+TGG | + | chr2.2:28282907-28282926 | MS.gene066738:intron | 25.0% |
!! | TAAGTTGAAATATTCATTGC+AGG | + | chr2.2:28277709-28277728 | MS.gene066738:intron | 25.0% |
!! | TCATATTTCTACCCAAAAAA+AGG | + | chr2.2:28277248-28277267 | MS.gene066738:intron | 25.0% |
!! | TTGTTAGCCTATTATGATTT+AGG | + | chr2.2:28278645-28278664 | MS.gene066738:intron | 25.0% |
!! | TTTAAAGCATGATCATGTAA+CGG | - | chr2.2:28281978-28281997 | None:intergenic | 25.0% |
!! | TTTTACTAGATGCAATAAAG+TGG | - | chr2.2:28277948-28277967 | None:intergenic | 25.0% |
!! | TTTTTGCTTATAATTTGGGA+AGG | - | chr2.2:28281437-28281456 | None:intergenic | 25.0% |
!!! | ATAGTTTTTTGTGTTATCCT+TGG | - | chr2.2:28281659-28281678 | None:intergenic | 25.0% |
!!! | ATTTACACAGCATTTTAATG+AGG | + | chr2.2:28277417-28277436 | MS.gene066738:intron | 25.0% |
!!! | CACCCATCTATTTTTTATTT+GGG | + | chr2.2:28278156-28278175 | MS.gene066738:intron | 25.0% |
!!! | GAACTTTTTTGTTTTTAAGG+GGG | + | chr2.2:28281288-28281307 | MS.gene066738:intron | 25.0% |
!!! | GGAACTTTTTTGTTTTTAAG+GGG | + | chr2.2:28281287-28281306 | MS.gene066738:intron | 25.0% |
!!! | GGTGATAATTTTTGTTTTAG+TGG | + | chr2.2:28277011-28277030 | MS.gene066738:intron | 25.0% |
!!! | GTTATTTTATTAAATGGGCT+GGG | + | chr2.2:28282884-28282903 | MS.gene066738:intron | 25.0% |
!!! | TCTATTATTTTTGCGCAATA+AGG | + | chr2.2:28279677-28279696 | MS.gene066738:intron | 25.0% |
!!! | TTACAATGTGGTGTTTTAAT+TGG | + | chr2.2:28277040-28277059 | MS.gene066738:intron | 25.0% |
!!! | TTAGACTTTATTTTGCTTGT+AGG | + | chr2.2:28277667-28277686 | MS.gene066738:intron | 25.0% |
!!! | TTTTTTGGGTAGAAATATGA+GGG | - | chr2.2:28277248-28277267 | None:intergenic | 25.0% |
!!! | TTTTTTTGGGTAGAAATATG+AGG | - | chr2.2:28277249-28277268 | None:intergenic | 25.0% |
AAAAATTTACCTACTCCTAG+TGG | - | chr2.2:28279070-28279089 | None:intergenic | 30.0% | |
AAATTATACCTCAATCTCAG+TGG | - | chr2.2:28282084-28282103 | None:intergenic | 30.0% | |
ACAAAAATATCTCATCGTGT+TGG | + | chr2.2:28278436-28278455 | MS.gene066738:intron | 30.0% | |
ACAGATATAAACAGATGGTT+AGG | - | chr2.2:28279854-28279873 | None:intergenic | 30.0% | |
ATAAATGATGCAGCACTTAA+AGG | - | chr2.2:28282205-28282224 | None:intergenic | 30.0% | |
ATTGCACAGATATAAACAGA+TGG | - | chr2.2:28279859-28279878 | None:intergenic | 30.0% | |
ATTGTCTTACAAATTCCAAC+TGG | + | chr2.2:28280433-28280452 | MS.gene066738:intron | 30.0% | |
CAATGCACATCACTATATAT+AGG | - | chr2.2:28280897-28280916 | None:intergenic | 30.0% | |
CCAAAAAAAGAGGGAAAATA+AGG | - | chr2.2:28281378-28281397 | None:intergenic | 30.0% | |
GAAAACAGTATCAATAACGA+TGG | - | chr2.2:28279168-28279187 | None:intergenic | 30.0% | |
GCATCTCATATCCAAATTTA+TGG | - | chr2.2:28278529-28278548 | None:intergenic | 30.0% | |
GCTAAACCAAATTTCACTTA+GGG | + | chr2.2:28282848-28282867 | MS.gene066738:intron | 30.0% | |
GGAATTTGTAAGACAATTCT+AGG | - | chr2.2:28280430-28280449 | None:intergenic | 30.0% | |
GTCTACAAGTGCATATAATT+GGG | - | chr2.2:28281001-28281020 | None:intergenic | 30.0% | |
GTGTAAAAGAATACACAAGT+TGG | - | chr2.2:28278995-28279014 | None:intergenic | 30.0% | |
GTTGTATATAACAGAAAGAG+GGG | - | chr2.2:28280472-28280491 | None:intergenic | 30.0% | |
TAAAAAATTTAGGTGGGTGA+AGG | - | chr2.2:28280179-28280198 | None:intergenic | 30.0% | |
TAAATGATGCAGCACTTAAA+GGG | - | chr2.2:28282204-28282223 | None:intergenic | 30.0% | |
TAATTTCACTTAGGGTTCAA+TGG | + | chr2.2:28282743-28282762 | MS.gene066738:intron | 30.0% | |
TACCTTTGTAGAACTATGAT+AGG | + | chr2.2:28280227-28280246 | MS.gene066738:intron | 30.0% | |
TCAAGAGGCAATTAATTTCT+TGG | + | chr2.2:28281090-28281109 | MS.gene066738:CDS | 30.0% | |
TCCCAAAAGCTGTTATAAAA+TGG | + | chr2.2:28279717-28279736 | MS.gene066738:intron | 30.0% | |
TCTCATCATAGGTAAATGAA+GGG | - | chr2.2:28281135-28281154 | None:intergenic | 30.0% | |
TCTTAGATTGCTAATAGCAT+AGG | - | chr2.2:28278681-28278700 | None:intergenic | 30.0% | |
TGATGATATAATGTCGTGTA+TGG | + | chr2.2:28279120-28279139 | MS.gene066738:intron | 30.0% | |
TGCTAAACCAAATTTCACTT+AGG | + | chr2.2:28282847-28282866 | MS.gene066738:intron | 30.0% | |
TGTAGAACTATGATAGGAAT+TGG | + | chr2.2:28280233-28280252 | MS.gene066738:intron | 30.0% | |
TGTCTACAAGTGCATATAAT+TGG | - | chr2.2:28281002-28281021 | None:intergenic | 30.0% | |
TTCAATTATCATGATGTCAC+AGG | - | chr2.2:28282127-28282146 | None:intergenic | 30.0% | |
TTGATGAAACAGTTTGTAAC+CGG | + | chr2.2:28282464-28282483 | MS.gene066738:intron | 30.0% | |
TTTGTGATGACAAATTCAAG+TGG | - | chr2.2:28277391-28277410 | None:intergenic | 30.0% | |
! | AGTTCTTCAAGAGGATTTTA+AGG | + | chr2.2:28282058-28282077 | MS.gene066738:CDS | 30.0% |
! | CTTTTGCTTATAATTTGGGA+TGG | + | chr2.2:28281727-28281746 | MS.gene066738:intron | 30.0% |
! | GATTTTATTGTGATGTACTC+AGG | + | chr2.2:28281045-28281064 | MS.gene066738:intron | 30.0% |
! | GCATACACAATGAATGTTTT+TGG | + | chr2.2:28281351-28281370 | MS.gene066738:intron | 30.0% |
! | GGTTGTATTTTGCATTTTCT+AGG | + | chr2.2:28283199-28283218 | MS.gene066738:intron | 30.0% |
! | GTATTTTGCATTTTCTAGGT+TGG | + | chr2.2:28283203-28283222 | MS.gene066738:intron | 30.0% |
! | TATTGCAATCTAAGAGCATA+CGG | - | chr2.2:28278859-28278878 | None:intergenic | 30.0% |
! | TGGTTCAGATTTTTATGTAC+TGG | + | chr2.2:28277070-28277089 | MS.gene066738:intron | 30.0% |
! | TTCCTATCATAGTTCTACAA+AGG | - | chr2.2:28280232-28280251 | None:intergenic | 30.0% |
! | TTTGATAAGGTGGTAGTTTT+GGG | + | chr2.2:28281849-28281868 | MS.gene066738:intron | 30.0% |
!! | CAAAATCTCTAGAATTAGGT+TGG | + | chr2.2:28282691-28282710 | MS.gene066738:intron | 30.0% |
!! | CAACCTAATTCTAGAGATTT+TGG | - | chr2.2:28282693-28282712 | None:intergenic | 30.0% |
!! | CTTCCAAAATCTCTAGAATT+AGG | + | chr2.2:28282687-28282706 | MS.gene066738:intron | 30.0% |
!! | GAAGAAAAACACTTTTTGGA+TGG | - | chr2.2:28283163-28283182 | None:intergenic | 30.0% |
!! | GGTTATTTTATTAAATGGGC+TGG | + | chr2.2:28282883-28282902 | MS.gene066738:intron | 30.0% |
!! | TAGAGATTTTGGAAGAGATT+TGG | - | chr2.2:28282682-28282701 | None:intergenic | 30.0% |
!! | TTGAATTGAGTTGACTAGTT+TGG | + | chr2.2:28277493-28277512 | MS.gene066738:intron | 30.0% |
!! | TTGGTTTGTTCATTTAGGTT+TGG | - | chr2.2:28282401-28282420 | None:intergenic | 30.0% |
!!! | CCTTATTTTCCCTCTTTTTT+TGG | + | chr2.2:28281375-28281394 | MS.gene066738:intron | 30.0% |
!!! | GCACCCATCTATTTTTTATT+TGG | + | chr2.2:28278155-28278174 | MS.gene066738:intron | 30.0% |
!!! | GTGTTTTAATTGGTCAAATG+TGG | + | chr2.2:28277050-28277069 | MS.gene066738:intron | 30.0% |
!!! | TAGAATTAGGTTGGTTTTGA+AGG | + | chr2.2:28282700-28282719 | MS.gene066738:intron | 30.0% |
!!! | TAGTCTTAGCTGGATTTTTT+TGG | + | chr2.2:28281229-28281248 | MS.gene066738:intron | 30.0% |
AAATTGTGCGATTTGTGATG+CGG | + | chr2.2:28282788-28282807 | MS.gene066738:intron | 35.0% | |
AACCAAATTTCACTTAGGGT+TGG | + | chr2.2:28282852-28282871 | MS.gene066738:intron | 35.0% | |
AACCAACCCTAAGTGAAATT+TGG | - | chr2.2:28282857-28282876 | None:intergenic | 35.0% | |
AAGCCGTTTCAGATAATATC+AGG | - | chr2.2:28278079-28278098 | None:intergenic | 35.0% | |
ACATGTAGAGTCAAACAATG+TGG | - | chr2.2:28278937-28278956 | None:intergenic | 35.0% | |
AGCTCACAGCTTAATTAGTA+GGG | + | chr2.2:28280844-28280863 | MS.gene066738:intron | 35.0% | |
ATTGAATGTATGTGCCATGT+CGG | + | chr2.2:28281810-28281829 | MS.gene066738:intron | 35.0% | |
CAAGTAAAACAACACACAAC+AGG | - | chr2.2:28277471-28277490 | None:intergenic | 35.0% | |
CAGATCTGCAACAAAAATGA+TGG | - | chr2.2:28277836-28277855 | None:intergenic | 35.0% | |
CATTGTGTATGCTCAATAGA+TGG | - | chr2.2:28281343-28281362 | None:intergenic | 35.0% | |
CTGAGTGATTGTACAGTTTA+GGG | + | chr2.2:28279981-28280000 | MS.gene066738:intron | 35.0% | |
CTGCCTGTATTAACTTTAAC+AGG | - | chr2.2:28277906-28277925 | None:intergenic | 35.0% | |
GAATTGTTTGGTTGTTGATC+TGG | + | chr2.2:28282919-28282938 | MS.gene066738:intron | 35.0% | |
GATAGGAACTGGTTATAAAC+CGG | - | chr2.2:28282486-28282505 | None:intergenic | 35.0% | |
GCAATAAGGAGAAACAAAGA+AGG | + | chr2.2:28279691-28279710 | MS.gene066738:intron | 35.0% | |
GCTTAATTGATCTTTCTACC+TGG | + | chr2.2:28280866-28280885 | MS.gene066738:intron | 35.0% | |
GGTACGTAAATTGTGTTAGT+AGG | + | chr2.2:28276990-28277009 | MS.gene066738:intron | 35.0% | |
GTCTCATCATAGGTAAATGA+AGG | - | chr2.2:28281136-28281155 | None:intergenic | 35.0% | |
GTGGACAAAACTCTAAATTC+TGG | - | chr2.2:28283248-28283267 | None:intergenic | 35.0% | |
GTTAACAGAGTATGCTTTCA+AGG | + | chr2.2:28277543-28277562 | MS.gene066738:intron | 35.0% | |
TAAACAGATGGTTAGGTACT+AGG | - | chr2.2:28279847-28279866 | None:intergenic | 35.0% | |
TAGAGTACGTGATAGAAAGA+GGG | - | chr2.2:28280778-28280797 | None:intergenic | 35.0% | |
TAGCTCACAGCTTAATTAGT+AGG | + | chr2.2:28280843-28280862 | MS.gene066738:intron | 35.0% | |
TCATATATCTAGTTGGCCAT+AGG | - | chr2.2:28278292-28278311 | None:intergenic | 35.0% | |
TGAGTGATTGTACAGTTTAG+GGG | + | chr2.2:28279982-28280001 | MS.gene066738:intron | 35.0% | |
TGGAATAACTTACTACTGCA+CGG | - | chr2.2:28280751-28280770 | None:intergenic | 35.0% | |
TTAGAGTACGTGATAGAAAG+AGG | - | chr2.2:28280779-28280798 | None:intergenic | 35.0% | |
TTGAAAACAATTGCCAACCT+AGG | - | chr2.2:28277282-28277301 | None:intergenic | 35.0% | |
TTTGGTTGTTGATCTGGTTA+GGG | + | chr2.2:28282925-28282944 | MS.gene066738:intron | 35.0% | |
! | AAACCAAGGTACTTAGTGAT+GGG | - | chr2.2:28277773-28277792 | None:intergenic | 35.0% |
! | ATCTTGGATTTGATTGGTTC+TGG | - | chr2.2:28282632-28282651 | None:intergenic | 35.0% |
! | ATTGCAATCTAAGAGCATAC+GGG | - | chr2.2:28278858-28278877 | None:intergenic | 35.0% |
! | CATCACTACTGATTACAAAG+AGG | - | chr2.2:28279892-28279911 | None:intergenic | 35.0% |
! | CTTTGATAAGGTGGTAGTTT+TGG | + | chr2.2:28281848-28281867 | MS.gene066738:intron | 35.0% |
! | GTGTATTCTTTTACACGAAC+AGG | + | chr2.2:28278999-28279018 | MS.gene066738:intron | 35.0% |
! | TAAACCAAGGTACTTAGTGA+TGG | - | chr2.2:28277774-28277793 | None:intergenic | 35.0% |
! | TAGTGGAACGTTTTACAATG+TGG | + | chr2.2:28277028-28277047 | MS.gene066738:intron | 35.0% |
! | TGAAGATTGGCTCTTTGATA+AGG | + | chr2.2:28281836-28281855 | MS.gene066738:intron | 35.0% |
! | TGCTTATAATTTGGGATGGA+GGG | + | chr2.2:28281731-28281750 | MS.gene066738:intron | 35.0% |
! | TGTAAGTTACATACTTGCTG+TGG | + | chr2.2:28283042-28283061 | MS.gene066738:intron | 35.0% |
! | TTGCTTATAATTTGGGATGG+AGG | + | chr2.2:28281730-28281749 | MS.gene066738:intron | 35.0% |
! | TTGGTGACTATAATGGGAAA+CGG | - | chr2.2:28282598-28282617 | None:intergenic | 35.0% |
!! | AATTTCACTTAGGGTTGGTT+TGG | + | chr2.2:28282857-28282876 | MS.gene066738:intron | 35.0% |
!! | ATTGAGTTGACTAGTTTGGT+AGG | + | chr2.2:28277497-28277516 | MS.gene066738:intron | 35.0% |
!! | CGATTGTTGGTGACTATAAT+GGG | - | chr2.2:28282604-28282623 | None:intergenic | 35.0% |
!! | CTGAAACGGCTTGTTAATTA+GGG | + | chr2.2:28278087-28278106 | MS.gene066738:intron | 35.0% |
!! | TCGATTGTTGGTGACTATAA+TGG | - | chr2.2:28282605-28282624 | None:intergenic | 35.0% |
!! | TCTGAAACGGCTTGTTAATT+AGG | + | chr2.2:28278086-28278105 | MS.gene066738:intron | 35.0% |
!! | TGAAACGGCTTGTTAATTAG+GGG | + | chr2.2:28278088-28278107 | MS.gene066738:intron | 35.0% |
!! | TGGGAATTGATGACGAAAAT+GGG | + | chr2.2:28279235-28279254 | MS.gene066738:CDS | 35.0% |
!! | TTGATAAGGTGGTAGTTTTG+GGG | + | chr2.2:28281850-28281869 | MS.gene066738:intron | 35.0% |
!! | TTGGGAATTGATGACGAAAA+TGG | + | chr2.2:28279234-28279253 | MS.gene066738:CDS | 35.0% |
!!! | AGTTTTGGGGTAAGGAAATA+GGG | + | chr2.2:28281863-28281882 | MS.gene066738:intron | 35.0% |
!!! | CTTAGCTGGATTTTTTTGGT+AGG | + | chr2.2:28281233-28281252 | MS.gene066738:intron | 35.0% |
!!! | TAGTTTTGGGGTAAGGAAAT+AGG | + | chr2.2:28281862-28281881 | MS.gene066738:intron | 35.0% |
!!! | TGAAGGCTCGTATTTTAACA+GGG | - | chr2.2:28280162-28280181 | None:intergenic | 35.0% |
AAAAAAAGGACCGTTGACCT+AGG | + | chr2.2:28277262-28277281 | MS.gene066738:intron | 40.0% | |
AAAACGAACTGGATAGGAAC+TGG | - | chr2.2:28282497-28282516 | None:intergenic | 40.0% | |
AACTGCTTGTGACAAGTTCA+AGG | - | chr2.2:28280069-28280088 | None:intergenic | 40.0% | |
ACGAACAACACACCAATACT+AGG | - | chr2.2:28282973-28282992 | None:intergenic | 40.0% | |
ACTTTGGTCACAAGGTACAT+AGG | + | chr2.2:28279292-28279311 | MS.gene066738:intron | 40.0% | |
AGACACAAAACGAACTGGAT+AGG | - | chr2.2:28282503-28282522 | None:intergenic | 40.0% | |
ATGCAGGTAGAGAAACTACA+TGG | - | chr2.2:28282280-28282299 | None:intergenic | 40.0% | |
ATGTAGTTTCTCTACCTGCA+TGG | + | chr2.2:28282279-28282298 | MS.gene066738:intron | 40.0% | |
ATTGTGCTGCAAAGTTGCTA+TGG | + | chr2.2:28279209-28279228 | MS.gene066738:intron | 40.0% | |
ATTTGGATATGAGATGCCTG+TGG | + | chr2.2:28278532-28278551 | MS.gene066738:CDS | 40.0% | |
CACTAAGTACCTTGGTTTAC+TGG | + | chr2.2:28277775-28277794 | MS.gene066738:CDS | 40.0% | |
CACTATATATAGGTGCATCC+AGG | - | chr2.2:28280887-28280906 | None:intergenic | 40.0% | |
CATATTATTGAGGGGAATGC+TGG | - | chr2.2:28278745-28278764 | None:intergenic | 40.0% | |
CATCGTCACTTGATGTGATA+AGG | + | chr2.2:28280965-28280984 | MS.gene066738:intron | 40.0% | |
CATGCTTATATGAGACCACT+AGG | + | chr2.2:28279052-28279071 | MS.gene066738:CDS | 40.0% | |
CGAACAACACACCAATACTA+GGG | - | chr2.2:28282972-28282991 | None:intergenic | 40.0% | |
CGTATGGTAGACAAAGAAAG+GGG | - | chr2.2:28280583-28280602 | None:intergenic | 40.0% | |
CGTTACTCAGAAAAAGGTTC+CGG | + | chr2.2:28277624-28277643 | MS.gene066738:CDS | 40.0% | |
CTCTTGAAGAACTGATTGCA+AGG | - | chr2.2:28282051-28282070 | None:intergenic | 40.0% | |
CTTGCAATCAGTTCTTCAAG+AGG | + | chr2.2:28282049-28282068 | MS.gene066738:CDS | 40.0% | |
GAACAACACACCAATACTAG+GGG | - | chr2.2:28282971-28282990 | None:intergenic | 40.0% | |
GCGTATGGTAGACAAAGAAA+GGG | - | chr2.2:28280584-28280603 | None:intergenic | 40.0% | |
GCTGAGTGATTGTACAGTTT+AGG | + | chr2.2:28279980-28279999 | MS.gene066738:intron | 40.0% | |
GCTGAGTTTCGCCATAAATT+TGG | + | chr2.2:28278515-28278534 | MS.gene066738:CDS | 40.0% | |
GCTTCAGTCATTCACATTGA+TGG | - | chr2.2:28279488-28279507 | None:intergenic | 40.0% | |
GGAAACGGAAGTTTGATTGT+TGG | - | chr2.2:28282583-28282602 | None:intergenic | 40.0% | |
GGGTCACATTTGTAAAGTTG+AGG | - | chr2.2:28279261-28279280 | None:intergenic | 40.0% | |
GTATGCTTTCAAGGCTGTTA+AGG | + | chr2.2:28277552-28277571 | MS.gene066738:CDS | 40.0% | |
GTTTGGTTGTTGATCTGGTT+AGG | + | chr2.2:28282924-28282943 | MS.gene066738:intron | 40.0% | |
TAACTAATTCAGGTAGGGGT+CGG | + | chr2.2:28282361-28282380 | MS.gene066738:intron | 40.0% | |
TACCTATGATGAGACAGTTC+AGG | + | chr2.2:28281141-28281160 | MS.gene066738:CDS | 40.0% | |
TACCTGAACTGTCTCATCAT+AGG | - | chr2.2:28281146-28281165 | None:intergenic | 40.0% | |
TATATGAGACCACTAGGAGT+AGG | + | chr2.2:28279058-28279077 | MS.gene066738:CDS | 40.0% | |
TCAGTCCCAAAAAACAAGCA+CGG | + | chr2.2:28282537-28282556 | MS.gene066738:intron | 40.0% | |
TGCAAAGTTGCTATGGTCTT+GGG | + | chr2.2:28279216-28279235 | MS.gene066738:intron | 40.0% | |
TGCACTGTCATCAACAATCA+TGG | - | chr2.2:28282321-28282340 | None:intergenic | 40.0% | |
TGTAGTTTCTCTACCTGCAT+GGG | + | chr2.2:28282280-28282299 | MS.gene066738:intron | 40.0% | |
TTGCGTCGTTACTCAGAAAA+AGG | + | chr2.2:28277618-28277637 | MS.gene066738:CDS | 40.0% | |
TTGGTTGTTGATCTGGTTAG+GGG | + | chr2.2:28282926-28282945 | MS.gene066738:intron | 40.0% | |
TTTCCCATCACTAAGTACCT+TGG | + | chr2.2:28277767-28277786 | MS.gene066738:CDS | 40.0% | |
! | AGATTGGCTCTTTGATAAGG+TGG | + | chr2.2:28281839-28281858 | MS.gene066738:intron | 40.0% |
! | AGGGTTCAATGGATTTGAAG+AGG | + | chr2.2:28282754-28282773 | MS.gene066738:intron | 40.0% |
! | ATTACTATTTTCTCCCCCGA+GGG | + | chr2.2:28276951-28276970 | MS.gene066738:CDS | 40.0% |
! | CCTTACTTTCAAAGCATTCG+AGG | - | chr2.2:28280928-28280947 | None:intergenic | 40.0% |
! | CTAGATTGATAGCTTCGCTA+GGG | - | chr2.2:28280606-28280625 | None:intergenic | 40.0% |
! | TCTAGATTGATAGCTTCGCT+AGG | - | chr2.2:28280607-28280626 | None:intergenic | 40.0% |
! | TGTACAGTTTAGGGGTATGA+TGG | + | chr2.2:28279990-28280009 | MS.gene066738:intron | 40.0% |
! | TTGCAATCTAAGAGCATACG+GGG | - | chr2.2:28278857-28278876 | None:intergenic | 40.0% |
!! | ACTTTCTGGTTTGCATTGCA+CGG | + | chr2.2:28277327-28277346 | MS.gene066738:intron | 40.0% |
!! | ATACTTTGGGTTGAGTTGCA+TGG | - | chr2.2:28278199-28278218 | None:intergenic | 40.0% |
!! | ATTTAGAGTTTTGTCCACCG+AGG | + | chr2.2:28283250-28283269 | MS.gene066738:CDS | 40.0% |
!! | CCTCGAATGCTTTGAAAGTA+AGG | + | chr2.2:28280925-28280944 | MS.gene066738:intron | 40.0% |
!! | GAAACGGCTTGTTAATTAGG+GGG | + | chr2.2:28278089-28278108 | MS.gene066738:intron | 40.0% |
!! | GGTTCTGGAATTTCGATTGT+TGG | - | chr2.2:28282617-28282636 | None:intergenic | 40.0% |
!! | GTTTGCGATTTGATTTGCGA+TGG | + | chr2.2:28282810-28282829 | MS.gene066738:intron | 40.0% |
!! | TACTTTGGGTTGAGTTGCAT+GGG | - | chr2.2:28278198-28278217 | None:intergenic | 40.0% |
!! | TTGAGTTGCATGGGATTTTG+TGG | - | chr2.2:28278189-28278208 | None:intergenic | 40.0% |
!! | TTGCATTTTCTAGGTTGGAG+TGG | + | chr2.2:28283208-28283227 | MS.gene066738:intron | 40.0% |
!!! | AGGTCAACGGTCCTTTTTTT+GGG | - | chr2.2:28277262-28277281 | None:intergenic | 40.0% |
!!! | ATCGTTCCGTGCTTGTTTTT+TGG | - | chr2.2:28282546-28282565 | None:intergenic | 40.0% |
!!! | GAAGGCTCGTATTTTAACAG+GGG | - | chr2.2:28280161-28280180 | None:intergenic | 40.0% |
!!! | GACAGTCTTTTAGTCTTAGC+TGG | + | chr2.2:28281219-28281238 | MS.gene066738:intron | 40.0% |
!!! | GTGAAGGCTCGTATTTTAAC+AGG | - | chr2.2:28280163-28280182 | None:intergenic | 40.0% |
!!! | GTTTTGGGGTAAGGAAATAG+GGG | + | chr2.2:28281864-28281883 | MS.gene066738:intron | 40.0% |
!!! | TAGGTCAACGGTCCTTTTTT+TGG | - | chr2.2:28277263-28277282 | None:intergenic | 40.0% |
!!! | TCGTTCCGTGCTTGTTTTTT+GGG | - | chr2.2:28282545-28282564 | None:intergenic | 40.0% |
!!! | TTGCGATGGTTTTGTGAAAC+TGG | + | chr2.2:28282824-28282843 | MS.gene066738:intron | 40.0% |
!!! | TTTTAAGGCCACTGAGATTG+AGG | + | chr2.2:28282073-28282092 | MS.gene066738:CDS | 40.0% |
AAAAAGGTTCCGGTGAGTAC+AGG | + | chr2.2:28277634-28277653 | MS.gene066738:intron | 45.0% | |
AAATAGGGGTTGGAGTGATG+AGG | + | chr2.2:28281878-28281897 | MS.gene066738:intron | 45.0% | |
AACAATGTGGCTGCTGACAA+AGG | - | chr2.2:28278924-28278943 | None:intergenic | 45.0% | |
ACACGAGACACAAAACGAAC+TGG | - | chr2.2:28282508-28282527 | None:intergenic | 45.0% | |
ACCAATTGAGGTTATCCCTG+CGG | - | chr2.2:28277578-28277597 | None:intergenic | 45.0% | |
ACCATGTTCTCAGTTGTCCT+TGG | + | chr2.2:28281266-28281285 | MS.gene066738:intron | 45.0% | |
AGCTCCATGAATGTGCTTCT+TGG | + | chr2.2:28278793-28278812 | MS.gene066738:intron | 45.0% | |
AGTCAACTTCCTGTACTCAC+CGG | - | chr2.2:28277646-28277665 | None:intergenic | 45.0% | |
ATAGGCTAACAACGGTTGTC+TGG | - | chr2.2:28278637-28278656 | None:intergenic | 45.0% | |
ATAGTTGTGCATGCTGCCTA+TGG | + | chr2.2:28278273-28278292 | MS.gene066738:intron | 45.0% | |
CAATTGCCAACCTAGGTCAA+CGG | - | chr2.2:28277275-28277294 | None:intergenic | 45.0% | |
CATCAGCAGAAGCTAGATAC+TGG | + | chr2.2:28280533-28280552 | MS.gene066738:intron | 45.0% | |
CATTCATGGAGCTCGATTGT+AGG | - | chr2.2:28278786-28278805 | None:intergenic | 45.0% | |
CATTTAGCCAACACATCCAC+AGG | - | chr2.2:28278551-28278570 | None:intergenic | 45.0% | |
CCTAGCATCAGCTGAAAAGA+AGG | - | chr2.2:28278465-28278484 | None:intergenic | 45.0% | |
CGCAAACAGAATCGTTTCCT+CGG | - | chr2.2:28277603-28277622 | None:intergenic | 45.0% | |
CGTCAGAGATTGCAGTGAAA+AGG | - | chr2.2:28279098-28279117 | None:intergenic | 45.0% | |
CTGCAAAGTTGCTATGGTCT+TGG | + | chr2.2:28279215-28279234 | MS.gene066738:intron | 45.0% | |
CTTGTGACCAAAGTAATGCC+CGG | - | chr2.2:28279286-28279305 | None:intergenic | 45.0% | |
CTTTACAAATGTGACCCTGC+CGG | + | chr2.2:28279264-28279283 | MS.gene066738:CDS | 45.0% | |
GAAAGAGGGGTGAATCTTAG+AGG | - | chr2.2:28280459-28280478 | None:intergenic | 45.0% | |
GGCGTATGGTAGACAAAGAA+AGG | - | chr2.2:28280585-28280604 | None:intergenic | 45.0% | |
TACCTTGGTTTACTGGCAAC+TGG | + | chr2.2:28277782-28277801 | MS.gene066738:CDS | 45.0% | |
TCCAAGGACAACTGAGAACA+TGG | - | chr2.2:28281270-28281289 | None:intergenic | 45.0% | |
TTCATTGCAGGACAAGCTCT+TGG | + | chr2.2:28277721-28277740 | MS.gene066738:intron | 45.0% | |
TTTACAAATGTGACCCTGCC+GGG | + | chr2.2:28279265-28279284 | MS.gene066738:CDS | 45.0% | |
! | ACAATTCTAGGGAGATGCCT+AGG | - | chr2.2:28280418-28280437 | None:intergenic | 45.0% |
! | ACAGTTTAGGGGTATGATGG+AGG | + | chr2.2:28279993-28280012 | MS.gene066738:intron | 45.0% |
! | ATAACCTCAATTGGTGTCCG+AGG | + | chr2.2:28277583-28277602 | MS.gene066738:CDS | 45.0% |
! | CATTACTATTTTCTCCCCCG+AGG | + | chr2.2:28276950-28276969 | MS.gene066738:CDS | 45.0% |
! | CCTTCTTTTCAGCTGATGCT+AGG | + | chr2.2:28278462-28278481 | MS.gene066738:intron | 45.0% |
! | CTAGGGGTGTGCAAAAGATT+TGG | - | chr2.2:28282955-28282974 | None:intergenic | 45.0% |
! | CTTTTGCACACCCCTAGTAT+TGG | + | chr2.2:28282958-28282977 | MS.gene066738:intron | 45.0% |
! | GTAGCCAAGAAGCACATTCA+TGG | - | chr2.2:28278800-28278819 | None:intergenic | 45.0% |
! | GTATCTAGCTTCTGCTGATG+TGG | - | chr2.2:28280533-28280552 | None:intergenic | 45.0% |
! | TTACTATTTTCTCCCCCGAG+GGG | + | chr2.2:28276952-28276971 | MS.gene066738:CDS | 45.0% |
!! | ATGGGCTGGGCTCTAAAAAA+TGG | + | chr2.2:28282897-28282916 | MS.gene066738:intron | 45.0% |
!! | CACTTAGGGTTGGTTTGGTT+TGG | + | chr2.2:28282862-28282881 | MS.gene066738:intron | 45.0% |
!! | CGTGATAGAAAGAGGGTGTT+TGG | - | chr2.2:28280771-28280790 | None:intergenic | 45.0% |
!! | CTGTGGATGTGTTGGCTAAA+TGG | + | chr2.2:28278549-28278568 | MS.gene066738:CDS | 45.0% |
!! | TCTACCTGCATGGGTTTTGA+GGG | + | chr2.2:28282289-28282308 | MS.gene066738:intron | 45.0% |
!!! | AAGGTGGTAGTTTTGGGGTA+AGG | + | chr2.2:28281855-28281874 | MS.gene066738:intron | 45.0% |
AAAGGACCGTTGACCTAGGT+TGG | + | chr2.2:28277266-28277285 | MS.gene066738:intron | 50.0% | |
ATCCTTCGATCCAGCACTTG+TGG | - | chr2.2:28281071-28281090 | None:intergenic | 50.0% | |
CGGGCATTACTTTGGTCACA+AGG | + | chr2.2:28279284-28279303 | MS.gene066738:CDS | 50.0% | |
GCTAACAACGGTTGTCTGGA+AGG | - | chr2.2:28278633-28278652 | None:intergenic | 50.0% | |
GGTAGACAAAGAAAGGGGAG+CGG | - | chr2.2:28280578-28280597 | None:intergenic | 50.0% | |
GGTGAATCTTAGAGGCCAGT+TGG | - | chr2.2:28280451-28280470 | None:intergenic | 50.0% | |
GGTTTGCATTGCACGGAAGT+TGG | + | chr2.2:28277334-28277353 | MS.gene066738:intron | 50.0% | |
GTTTCCTCGGACACCAATTG+AGG | - | chr2.2:28277590-28277609 | None:intergenic | 50.0% | |
TGAGATGCCTGTGGATGTGT+TGG | + | chr2.2:28278541-28278560 | MS.gene066738:CDS | 50.0% | |
TGCCAGTTGCCAGTAAACCA+AGG | - | chr2.2:28277787-28277806 | None:intergenic | 50.0% | |
TGCCTAGGCACATCTCTCAA+AGG | - | chr2.2:28280403-28280422 | None:intergenic | 50.0% | |
TGCTGGATCGAAGGATCAAG+AGG | + | chr2.2:28281075-28281094 | MS.gene066738:CDS | 50.0% | |
TGGGGTAAGGAAATAGGGGT+TGG | + | chr2.2:28281868-28281887 | MS.gene066738:intron | 50.0% | |
TTACTGGCAACTGGCATGAC+AGG | + | chr2.2:28277791-28277810 | MS.gene066738:CDS | 50.0% | |
TTCAGCTGATGCTAGGACAC+TGG | + | chr2.2:28278469-28278488 | MS.gene066738:intron | 50.0% | |
! | CTAGGTTGGAGTGGTGCAAA+AGG | + | chr2.2:28283217-28283236 | MS.gene066738:intron | 50.0% |
! | CTCTACCTGCATGGGTTTTG+AGG | + | chr2.2:28282288-28282307 | MS.gene066738:intron | 50.0% |
! | GCCATGTCGGTACTGAAGAT+TGG | + | chr2.2:28281823-28281842 | MS.gene066738:intron | 50.0% |
!! | CAAGTGCTCGTCGATTTCCT+CGG | - | chr2.2:28283270-28283289 | None:intergenic | 50.0% |
!! | GAGGGGAATGCTGGTTTCAA+GGG | - | chr2.2:28278736-28278755 | None:intergenic | 50.0% |
!! | GCCAATCTTCAGTACCGACA+TGG | - | chr2.2:28281827-28281846 | None:intergenic | 50.0% |
!! | TGAGGGGAATGCTGGTTTCA+AGG | - | chr2.2:28278737-28278756 | None:intergenic | 50.0% |
AATTCAGGTAGGGGTCGGCA+TGG | + | chr2.2:28282366-28282385 | MS.gene066738:intron | 55.0% | |
ACTTGAAAGAGACGCCCCTC+GGG | - | chr2.2:28276969-28276988 | None:intergenic | 55.0% | |
ATGAGTCGAGGAAGTGGAGG+TGG | + | chr2.2:28276915-28276934 | MS.gene066738:CDS | 55.0% | |
CACTTGAAAGAGACGCCCCT+CGG | - | chr2.2:28276970-28276989 | None:intergenic | 55.0% | |
CTAGCTTCTGCTGATGTGGC+AGG | - | chr2.2:28280529-28280548 | None:intergenic | 55.0% | |
GACCAAAGTAATGCCCGGCA+GGG | - | chr2.2:28279281-28279300 | None:intergenic | 55.0% | |
GATAGCTTCGCTAGGGCGTA+TGG | - | chr2.2:28280599-28280618 | None:intergenic | 55.0% | |
GCCGCAGGGATAACCTCAAT+TGG | + | chr2.2:28277574-28277593 | MS.gene066738:CDS | 55.0% | |
TAGGGGTTGGAGTGATGAGG+AGG | + | chr2.2:28281881-28281900 | MS.gene066738:intron | 55.0% | |
TCAAGGCTGTTAAGGCCGCA+GGG | + | chr2.2:28277560-28277579 | MS.gene066738:CDS | 55.0% | |
TGACCAAAGTAATGCCCGGC+AGG | - | chr2.2:28279282-28279301 | None:intergenic | 55.0% | |
TGTACTCAGGCCACAAGTGC+TGG | + | chr2.2:28281058-28281077 | MS.gene066738:intron | 55.0% | |
TTCAAGGCTGTTAAGGCCGC+AGG | + | chr2.2:28277559-28277578 | MS.gene066738:CDS | 55.0% | |
! | GGCCTTTGAGAGATGTGCCT+AGG | + | chr2.2:28280398-28280417 | MS.gene066738:intron | 55.0% |
!! | GAGGGGCGTCTCTTTCAAGT+GGG | + | chr2.2:28276969-28276988 | MS.gene066738:CDS | 55.0% |
!!! | ACCTGCATGGGTTTTGAGGG+AGG | + | chr2.2:28282292-28282311 | MS.gene066738:intron | 55.0% |
!!! | CCTGCATGGGTTTTGAGGGA+GGG | + | chr2.2:28282293-28282312 | MS.gene066738:intron | 55.0% |
AGGTAGGGGTCGGCATGGTT+TGG | + | chr2.2:28282371-28282390 | MS.gene066738:intron | 60.0% | |
CCCTCCCTCAAAACCCATGC+AGG | - | chr2.2:28282296-28282315 | None:intergenic | 60.0% | |
CTTGAAAGAGACGCCCCTCG+GGG | - | chr2.2:28276968-28276987 | None:intergenic | 60.0% | |
GACCCTGCCGGGCATTACTT+TGG | + | chr2.2:28279276-28279295 | MS.gene066738:CDS | 60.0% | |
GCTTCTGCTGATGTGGCAGG+AGG | - | chr2.2:28280526-28280545 | None:intergenic | 60.0% | |
TTGAAAGAGACGCCCCTCGG+GGG | - | chr2.2:28276967-28276986 | None:intergenic | 60.0% | |
! | CTGATGTGGCAGGAGGTGTG+TGG | - | chr2.2:28280519-28280538 | None:intergenic | 60.0% |
!! | CGAGGGGCGTCTCTTTCAAG+TGG | + | chr2.2:28276968-28276987 | MS.gene066738:CDS | 60.0% |
!! | GGCCACAAGTGCTGGATCGA+AGG | + | chr2.2:28281066-28281085 | MS.gene066738:intron | 60.0% |
!! | GTGCTCGTCGATTTCCTCGG+TGG | - | chr2.2:28283267-28283286 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 28276915 | 28283313 | 28276915 | ID=MS.gene066738 |
chr2.2 | mRNA | 28276915 | 28283313 | 28276915 | ID=MS.gene066738.t1;Parent=MS.gene066738 |
chr2.2 | exon | 28276915 | 28276990 | 28276915 | ID=MS.gene066738.t1.exon1;Parent=MS.gene066738.t1 |
chr2.2 | CDS | 28276915 | 28276990 | 28276915 | ID=cds.MS.gene066738.t1;Parent=MS.gene066738.t1 |
chr2.2 | exon | 28277551 | 28277645 | 28277551 | ID=MS.gene066738.t1.exon2;Parent=MS.gene066738.t1 |
chr2.2 | CDS | 28277551 | 28277645 | 28277551 | ID=cds.MS.gene066738.t1;Parent=MS.gene066738.t1 |
chr2.2 | exon | 28277731 | 28277812 | 28277731 | ID=MS.gene066738.t1.exon3;Parent=MS.gene066738.t1 |
chr2.2 | CDS | 28277731 | 28277812 | 28277731 | ID=cds.MS.gene066738.t1;Parent=MS.gene066738.t1 |
chr2.2 | exon | 28278474 | 28278570 | 28278474 | ID=MS.gene066738.t1.exon4;Parent=MS.gene066738.t1 |
chr2.2 | CDS | 28278474 | 28278570 | 28278474 | ID=cds.MS.gene066738.t1;Parent=MS.gene066738.t1 |
chr2.2 | exon | 28279021 | 28279079 | 28279021 | ID=MS.gene066738.t1.exon5;Parent=MS.gene066738.t1 |
chr2.2 | CDS | 28279021 | 28279079 | 28279021 | ID=cds.MS.gene066738.t1;Parent=MS.gene066738.t1 |
chr2.2 | exon | 28279223 | 28279305 | 28279223 | ID=MS.gene066738.t1.exon6;Parent=MS.gene066738.t1 |
chr2.2 | CDS | 28279223 | 28279305 | 28279223 | ID=cds.MS.gene066738.t1;Parent=MS.gene066738.t1 |
chr2.2 | exon | 28281067 | 28281162 | 28281067 | ID=MS.gene066738.t1.exon7;Parent=MS.gene066738.t1 |
chr2.2 | CDS | 28281067 | 28281162 | 28281067 | ID=cds.MS.gene066738.t1;Parent=MS.gene066738.t1 |
chr2.2 | exon | 28282035 | 28282094 | 28282035 | ID=MS.gene066738.t1.exon8;Parent=MS.gene066738.t1 |
chr2.2 | CDS | 28282035 | 28282094 | 28282035 | ID=cds.MS.gene066738.t1;Parent=MS.gene066738.t1 |
chr2.2 | exon | 28283221 | 28283313 | 28283221 | ID=MS.gene066738.t1.exon9;Parent=MS.gene066738.t1 |
chr2.2 | CDS | 28283221 | 28283313 | 28283221 | ID=cds.MS.gene066738.t1;Parent=MS.gene066738.t1 |
Gene Sequence |
Protein sequence |