Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51514.t1 | XP_003598097.1 | 98.1 | 1213 | 23 | 0 | 1 | 1213 | 1 | 1213 | 0.00E+00 | 2194.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51514.t1 | P98204 | 70.3 | 1108 | 320 | 8 | 90 | 1194 | 39 | 1140 | 0.0e+00 | 1562.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51514.t1 | G7J0A6 | 98.1 | 1213 | 23 | 0 | 1 | 1213 | 1 | 1213 | 0.0e+00 | 2194.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049181 | MS.gene51514 | 0.80535 | 1.39E-49 | -1.69E-46 |
| MS.gene049259 | MS.gene51514 | 0.83657 | 8.66E-57 | -1.69E-46 |
| MS.gene049281 | MS.gene51514 | 0.812609 | 3.89E-51 | -1.69E-46 |
| MS.gene05015 | MS.gene51514 | 0.849046 | 4.16E-60 | -1.69E-46 |
| MS.gene050173 | MS.gene51514 | 0.810101 | 1.36E-50 | -1.69E-46 |
| MS.gene050363 | MS.gene51514 | 0.869541 | 2.87E-66 | -1.69E-46 |
| MS.gene050381 | MS.gene51514 | 0.861272 | 1.15E-63 | -1.69E-46 |
| MS.gene050504 | MS.gene51514 | -0.801256 | 9.81E-49 | -1.69E-46 |
| MS.gene050883 | MS.gene51514 | 0.87058 | 1.31E-66 | -1.69E-46 |
| MS.gene051044 | MS.gene51514 | 0.840398 | 8.91E-58 | -1.69E-46 |
| MS.gene051127 | MS.gene51514 | 0.861805 | 7.93E-64 | -1.69E-46 |
| MS.gene051138 | MS.gene51514 | 0.812973 | 3.24E-51 | -1.69E-46 |
| MS.gene051341 | MS.gene51514 | 0.825439 | 4.68E-54 | -1.69E-46 |
| MS.gene051946 | MS.gene51514 | 0.844727 | 6.32E-59 | -1.69E-46 |
| MS.gene052053 | MS.gene51514 | 0.848737 | 5.07E-60 | -1.69E-46 |
| MS.gene052089 | MS.gene51514 | 0.82894 | 6.80E-55 | -1.69E-46 |
| MS.gene052566 | MS.gene51514 | 0.826502 | 2.62E-54 | -1.69E-46 |
| MS.gene053069 | MS.gene51514 | 0.808251 | 3.40E-50 | -1.69E-46 |
| MS.gene053420 | MS.gene51514 | 0.838343 | 3.04E-57 | -1.69E-46 |
| MS.gene053488 | MS.gene51514 | 0.833259 | 5.91E-56 | -1.69E-46 |
| MS.gene053549 | MS.gene51514 | 0.820516 | 6.58E-53 | -1.69E-46 |
| MS.gene053561 | MS.gene51514 | 0.881363 | 2.55E-70 | -1.69E-46 |
| MS.gene053826 | MS.gene51514 | 0.814197 | 1.74E-51 | -1.69E-46 |
| MS.gene053932 | MS.gene51514 | 0.815715 | 8.02E-52 | -1.69E-46 |
| MS.gene054054 | MS.gene51514 | 0.830665 | 2.58E-55 | -1.69E-46 |
| MS.gene054056 | MS.gene51514 | 0.838986 | 2.08E-57 | -1.69E-46 |
| MS.gene054626 | MS.gene51514 | 0.800411 | 1.46E-48 | -1.69E-46 |
| MS.gene054708 | MS.gene51514 | 0.83534 | 1.78E-56 | -1.69E-46 |
| MS.gene055124 | MS.gene51514 | 0.824769 | 6.75E-54 | -1.69E-46 |
| MS.gene055154 | MS.gene51514 | 0.853352 | 2.53E-61 | -1.69E-46 |
| MS.gene055549 | MS.gene51514 | 0.8793 | 1.39E-69 | -1.69E-46 |
| MS.gene055550 | MS.gene51514 | 0.87938 | 1.31E-69 | -1.69E-46 |
| MS.gene055551 | MS.gene51514 | 0.851917 | 6.49E-61 | -1.69E-46 |
| MS.gene055942 | MS.gene51514 | 0.844913 | 5.63E-59 | -1.69E-46 |
| MS.gene056310 | MS.gene51514 | 0.830603 | 2.68E-55 | -1.69E-46 |
| MS.gene056311 | MS.gene51514 | 0.868651 | 5.57E-66 | -1.69E-46 |
| MS.gene056313 | MS.gene51514 | 0.802295 | 6.00E-49 | -1.69E-46 |
| MS.gene056365 | MS.gene51514 | 0.811053 | 8.49E-51 | -1.69E-46 |
| MS.gene056408 | MS.gene51514 | 0.818966 | 1.49E-52 | -1.69E-46 |
| MS.gene056530 | MS.gene51514 | 0.817005 | 4.13E-52 | -1.69E-46 |
| MS.gene056761 | MS.gene51514 | 0.803213 | 3.88E-49 | -1.69E-46 |
| MS.gene057001 | MS.gene51514 | 0.813924 | 2.00E-51 | -1.69E-46 |
| MS.gene057014 | MS.gene51514 | 0.848606 | 5.51E-60 | -1.69E-46 |
| MS.gene057226 | MS.gene51514 | 0.832351 | 9.93E-56 | -1.69E-46 |
| MS.gene058099 | MS.gene51514 | 0.832039 | 1.19E-55 | -1.69E-46 |
| MS.gene058109 | MS.gene51514 | 0.802387 | 5.75E-49 | -1.69E-46 |
| MS.gene058171 | MS.gene51514 | 0.823432 | 1.39E-53 | -1.69E-46 |
| MS.gene058173 | MS.gene51514 | 0.817196 | 3.74E-52 | -1.69E-46 |
| MS.gene058175 | MS.gene51514 | 0.824998 | 5.96E-54 | -1.69E-46 |
| MS.gene058268 | MS.gene51514 | 0.804869 | 1.76E-49 | -1.69E-46 |
| MS.gene058269 | MS.gene51514 | 0.806197 | 9.25E-50 | -1.69E-46 |
| MS.gene058493 | MS.gene51514 | 0.880647 | 4.62E-70 | -1.69E-46 |
| MS.gene058494 | MS.gene51514 | 0.859692 | 3.47E-63 | -1.69E-46 |
| MS.gene058496 | MS.gene51514 | 0.823534 | 1.32E-53 | -1.69E-46 |
| MS.gene058628 | MS.gene51514 | 0.913482 | 5.84E-84 | -1.69E-46 |
| MS.gene058629 | MS.gene51514 | 0.902132 | 1.33E-78 | -1.69E-46 |
| MS.gene058630 | MS.gene51514 | 0.907958 | 2.89E-81 | -1.69E-46 |
| MS.gene05884 | MS.gene51514 | 0.838439 | 2.87E-57 | -1.69E-46 |
| MS.gene059022 | MS.gene51514 | -0.814848 | 1.25E-51 | -1.69E-46 |
| MS.gene059223 | MS.gene51514 | 0.80362 | 3.20E-49 | -1.69E-46 |
| MS.gene059690 | MS.gene51514 | 0.879966 | 8.09E-70 | -1.69E-46 |
| MS.gene059691 | MS.gene51514 | 0.845471 | 3.98E-59 | -1.69E-46 |
| MS.gene059694 | MS.gene51514 | 0.873577 | 1.32E-67 | -1.69E-46 |
| MS.gene059697 | MS.gene51514 | 0.872097 | 4.13E-67 | -1.69E-46 |
| MS.gene059865 | MS.gene51514 | -0.813481 | 2.50E-51 | -1.69E-46 |
| MS.gene059916 | MS.gene51514 | 0.832363 | 9.87E-56 | -1.69E-46 |
| MS.gene06012 | MS.gene51514 | 0.829092 | 6.25E-55 | -1.69E-46 |
| MS.gene06077 | MS.gene51514 | -0.808659 | 2.78E-50 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51514.t1 | MTR_3g007240 | 98.021 | 1213 | 24 | 0 | 1 | 1213 | 1 | 1213 | 0.0 | 2474 |
| MS.gene51514.t1 | MTR_3g007240 | 96.760 | 926 | 29 | 1 | 1 | 925 | 1 | 926 | 0.0 | 1860 |
| MS.gene51514.t1 | MTR_8g044210 | 76.956 | 1176 | 250 | 6 | 53 | 1211 | 4 | 1175 | 0.0 | 1816 |
| MS.gene51514.t1 | MTR_7g073480 | 57.458 | 1133 | 425 | 8 | 115 | 1192 | 137 | 1267 | 0.0 | 1310 |
| MS.gene51514.t1 | MTR_5g037210 | 36.525 | 1128 | 631 | 21 | 121 | 1189 | 24 | 1125 | 0.0 | 719 |
| MS.gene51514.t1 | MTR_4g112430 | 37.092 | 1073 | 599 | 16 | 120 | 1133 | 38 | 1093 | 0.0 | 691 |
| MS.gene51514.t1 | MTR_2g099690 | 35.203 | 1159 | 651 | 21 | 120 | 1199 | 40 | 1177 | 0.0 | 684 |
| MS.gene51514.t1 | MTR_8g069920 | 35.387 | 1136 | 656 | 19 | 137 | 1208 | 67 | 1188 | 0.0 | 671 |
| MS.gene51514.t1 | MTR_6g006910 | 36.693 | 1131 | 628 | 25 | 120 | 1178 | 37 | 1151 | 0.0 | 670 |
| MS.gene51514.t1 | MTR_3g037330 | 36.094 | 1111 | 647 | 17 | 120 | 1178 | 35 | 1134 | 0.0 | 656 |
| MS.gene51514.t1 | MTR_0021s0360 | 35.810 | 1117 | 645 | 19 | 120 | 1178 | 33 | 1135 | 0.0 | 654 |
| MS.gene51514.t1 | MTR_3g037330 | 35.869 | 1065 | 622 | 16 | 165 | 1178 | 10 | 1064 | 0.0 | 615 |
| MS.gene51514.t1 | MTR_2g090610 | 33.272 | 1088 | 646 | 21 | 121 | 1190 | 3 | 1028 | 0.0 | 565 |
| MS.gene51514.t1 | MTR_2g099690 | 37.670 | 884 | 465 | 18 | 120 | 935 | 40 | 905 | 1.36e-174 | 539 |
| MS.gene51514.t1 | MTR_2g090610 | 34.340 | 993 | 578 | 20 | 121 | 1095 | 3 | 939 | 6.98e-173 | 536 |
| MS.gene51514.t1 | MTR_2g099690 | 35.925 | 849 | 458 | 17 | 120 | 900 | 40 | 870 | 1.17e-155 | 488 |
| MS.gene51514.t1 | MTR_8g018290 | 34.825 | 827 | 460 | 16 | 443 | 1199 | 14 | 831 | 1.46e-153 | 483 |
| MS.gene51514.t1 | MTR_8g018290 | 34.412 | 834 | 461 | 15 | 443 | 1199 | 14 | 838 | 4.97e-152 | 479 |
| MS.gene51514.t1 | MTR_8g062150 | 35.676 | 555 | 329 | 12 | 121 | 660 | 44 | 585 | 4.18e-94 | 314 |
| MS.gene51514.t1 | MTR_8g005730 | 36.471 | 170 | 85 | 4 | 603 | 772 | 17 | 163 | 7.95e-28 | 111 |
| MS.gene51514.t1 | MTR_8g005740 | 28.745 | 247 | 78 | 4 | 666 | 872 | 1 | 189 | 6.16e-19 | 86.7 |
| MS.gene51514.t1 | MTR_4g008650 | 23.048 | 525 | 264 | 15 | 421 | 934 | 380 | 775 | 6.34e-17 | 87.0 |
| MS.gene51514.t1 | MTR_8g027160 | 25.142 | 529 | 288 | 18 | 491 | 986 | 352 | 805 | 1.29e-16 | 85.9 |
| MS.gene51514.t1 | MTR_4g008650 | 23.048 | 525 | 264 | 16 | 421 | 934 | 380 | 775 | 1.56e-16 | 85.5 |
| MS.gene51514.t1 | MTR_8g027160 | 25.142 | 529 | 288 | 18 | 491 | 986 | 352 | 805 | 2.16e-16 | 85.5 |
| MS.gene51514.t1 | MTR_8g090125 | 22.244 | 508 | 257 | 15 | 440 | 934 | 351 | 733 | 2.86e-16 | 85.1 |
| MS.gene51514.t1 | MTR_8g027160 | 25.210 | 476 | 251 | 16 | 491 | 934 | 352 | 754 | 1.99e-15 | 82.0 |
| MS.gene51514.t1 | MTR_8g027160 | 25.210 | 476 | 251 | 16 | 491 | 934 | 352 | 754 | 2.25e-15 | 81.6 |
| MS.gene51514.t1 | MTR_2g056040 | 46.667 | 75 | 39 | 1 | 752 | 825 | 1 | 75 | 5.84e-15 | 71.6 |
| MS.gene51514.t1 | MTR_2g105830 | 24.672 | 458 | 222 | 17 | 491 | 934 | 485 | 833 | 8.56e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51514.t1 | AT5G04930 | 69.673 | 1131 | 327 | 10 | 73 | 1197 | 26 | 1146 | 0.0 | 1664 |
| MS.gene51514.t1 | AT1G59820 | 36.214 | 1157 | 650 | 25 | 105 | 1203 | 20 | 1146 | 0.0 | 719 |
| MS.gene51514.t1 | AT3G27870 | 36.554 | 1149 | 652 | 19 | 120 | 1207 | 37 | 1169 | 0.0 | 714 |
| MS.gene51514.t1 | AT1G68710 | 36.413 | 1115 | 644 | 19 | 120 | 1178 | 41 | 1146 | 0.0 | 698 |
| MS.gene51514.t1 | AT1G68710 | 36.413 | 1115 | 644 | 19 | 120 | 1178 | 41 | 1146 | 0.0 | 698 |
| MS.gene51514.t1 | AT3G25610 | 37.511 | 1117 | 626 | 21 | 120 | 1178 | 39 | 1141 | 0.0 | 695 |
| MS.gene51514.t1 | AT1G26130 | 35.745 | 1161 | 660 | 22 | 120 | 1212 | 41 | 1183 | 0.0 | 691 |
| MS.gene51514.t1 | AT1G26130 | 35.745 | 1161 | 660 | 22 | 120 | 1212 | 41 | 1183 | 0.0 | 691 |
| MS.gene51514.t1 | AT1G26130 | 35.745 | 1161 | 660 | 22 | 120 | 1212 | 41 | 1183 | 0.0 | 691 |
| MS.gene51514.t1 | AT1G26130 | 35.678 | 1166 | 653 | 22 | 120 | 1212 | 41 | 1182 | 0.0 | 690 |
| MS.gene51514.t1 | AT1G54280 | 35.782 | 1157 | 637 | 20 | 121 | 1191 | 41 | 1177 | 0.0 | 690 |
| MS.gene51514.t1 | AT1G54280 | 35.782 | 1157 | 637 | 20 | 121 | 1191 | 41 | 1177 | 0.0 | 690 |
| MS.gene51514.t1 | AT1G54280 | 35.782 | 1157 | 637 | 20 | 121 | 1191 | 41 | 1177 | 0.0 | 690 |
| MS.gene51514.t1 | AT3G13900 | 36.080 | 1153 | 637 | 25 | 121 | 1191 | 41 | 1175 | 0.0 | 689 |
| MS.gene51514.t1 | AT1G68710 | 35.583 | 1141 | 644 | 20 | 120 | 1178 | 41 | 1172 | 0.0 | 684 |
| MS.gene51514.t1 | AT1G17500 | 35.166 | 1146 | 659 | 24 | 120 | 1202 | 40 | 1164 | 0.0 | 679 |
| MS.gene51514.t1 | AT1G17500 | 35.166 | 1146 | 659 | 24 | 120 | 1202 | 40 | 1164 | 0.0 | 679 |
| MS.gene51514.t1 | AT1G72700 | 34.459 | 1155 | 667 | 20 | 120 | 1202 | 40 | 1176 | 0.0 | 672 |
| MS.gene51514.t1 | AT1G72700 | 34.459 | 1155 | 667 | 20 | 120 | 1202 | 40 | 1176 | 0.0 | 672 |
| MS.gene51514.t1 | AT1G72700 | 34.459 | 1155 | 667 | 20 | 120 | 1202 | 40 | 1176 | 0.0 | 672 |
| MS.gene51514.t1 | AT1G13210 | 35.550 | 1128 | 646 | 22 | 120 | 1183 | 37 | 1147 | 0.0 | 665 |
| MS.gene51514.t1 | AT3G27870 | 38.964 | 965 | 524 | 15 | 120 | 1034 | 37 | 986 | 0.0 | 661 |
| MS.gene51514.t1 | AT3G13900 | 38.692 | 933 | 481 | 23 | 121 | 979 | 41 | 956 | 0.0 | 602 |
| MS.gene51514.t1 | AT3G27870 | 35.650 | 993 | 564 | 17 | 275 | 1207 | 1 | 978 | 0.0 | 587 |
| MS.gene51514.t1 | AT5G44240 | 32.797 | 1119 | 663 | 23 | 121 | 1213 | 3 | 1058 | 7.56e-180 | 559 |
| MS.gene51514.t1 | AT5G44240 | 32.797 | 1119 | 663 | 23 | 121 | 1213 | 35 | 1090 | 2.03e-179 | 559 |
| MS.gene51514.t1 | AT3G13900 | 37.121 | 924 | 485 | 23 | 121 | 975 | 41 | 937 | 3.98e-178 | 551 |
| MS.gene51514.t1 | AT1G07810 | 23.226 | 775 | 426 | 34 | 209 | 951 | 132 | 769 | 1.90e-15 | 82.4 |
| MS.gene51514.t1 | AT1G07670 | 23.086 | 810 | 455 | 35 | 209 | 986 | 132 | 805 | 1.07e-14 | 80.1 |
| MS.gene51514.t1 | AT1G07670 | 23.086 | 810 | 455 | 35 | 209 | 986 | 132 | 805 | 1.07e-14 | 80.1 |
| MS.gene51514.t1 | AT4G00900 | 24.566 | 346 | 195 | 12 | 658 | 986 | 505 | 801 | 1.12e-14 | 79.7 |
| MS.gene51514.t1 | AT4G00900 | 24.566 | 346 | 195 | 12 | 658 | 986 | 505 | 801 | 1.12e-14 | 79.7 |
Find 210 sgRNAs with CRISPR-Local
Find 338 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCATGTCTATTCATTCTA+TGG | 0.149134 | 3.4:+2911099 | MS.gene51514:CDS |
| CTTCCACAACTTGCAGTATT+TGG | 0.162743 | 3.4:+2911439 | MS.gene51514:CDS |
| TCCTTGTTCTTGTCCTATTT+TGG | 0.168882 | 3.4:+2914800 | MS.gene51514:CDS |
| GACTCTTGCTGTGGTTATTT+TGG | 0.180648 | 3.4:+2915554 | MS.gene51514:CDS |
| GAAAGCAATGTTTCCATATT+AGG | 0.180689 | 3.4:+2913842 | MS.gene51514:CDS |
| TGAATCTGTTGCCTTATTAT+AGG | 0.187667 | 3.4:+2912139 | MS.gene51514:CDS |
| CTTGAACTTGACTTTGATTT+TGG | 0.194455 | 3.4:-2910995 | None:intergenic |
| TATTGCTTTGTACATTTCTA+TGG | 0.204359 | 3.4:+2912272 | MS.gene51514:CDS |
| TATTGATCATTTGGTGTTCT+TGG | 0.208433 | 3.4:-2910941 | None:intergenic |
| GGTTTAAGAACACTTGTTAT+TGG | 0.228096 | 3.4:+2913707 | MS.gene51514:CDS |
| ATATGGATTTATGGCGAATA+TGG | 0.231340 | 3.4:+2911846 | MS.gene51514:CDS |
| TAGGAATATATATGGATTTA+TGG | 0.232364 | 3.4:+2911837 | MS.gene51514:CDS |
| GGATTGTGACTTACCAAAAT+AGG | 0.232979 | 3.4:-2914813 | None:intergenic |
| TTGAATATTAATGAAGATTT+GGG | 0.249431 | 3.4:+2912384 | MS.gene51514:CDS |
| TTTCAAGTACTGGACTGTTC+TGG | 0.249751 | 3.4:+2916344 | MS.gene51514:CDS |
| TATCAAAGAGTTGCTGAAAA+TGG | 0.261402 | 3.4:+2916487 | MS.gene51514:CDS |
| TTTGAATATTAATGAAGATT+TGG | 0.266623 | 3.4:+2912383 | MS.gene51514:CDS |
| GGCAAAGCATGGTTGTATTT+TGG | 0.266627 | 3.4:+2915472 | MS.gene51514:CDS |
| TTAACTTTCACATTCATCTT+TGG | 0.277596 | 3.4:-2913000 | None:intergenic |
| CACTGCAGGTTCAATGTCTT+GGG | 0.279847 | 3.4:+2913506 | MS.gene51514:intron |
| GCAGCAAGCACTGCGGTATT+TGG | 0.280588 | 3.4:+2913782 | MS.gene51514:CDS |
| ATGAGTAGTTTAAACCATTC+AGG | 0.284184 | 3.4:+2911154 | MS.gene51514:CDS |
| CACAGCATTGCTTCCACGTT+TGG | 0.291090 | 3.4:+2916390 | MS.gene51514:CDS |
| CAGATAAAGTTGAGAATAAC+AGG | 0.292097 | 3.4:+2911548 | MS.gene51514:CDS |
| GGCCTCCACTCTTTGCATAT+TGG | 0.293028 | 3.4:+2915493 | MS.gene51514:CDS |
| AATAGCAGATGCTCCTAATA+TGG | 0.295806 | 3.4:-2913855 | None:intergenic |
| TTCTTTCATGTTTCAAGTAC+TGG | 0.299241 | 3.4:+2916334 | MS.gene51514:CDS |
| GAGCAGCAGGGATTAAAGTT+TGG | 0.310183 | 3.4:+2913924 | MS.gene51514:CDS |
| TACTTATAGTCTTCAACTTC+CGG | 0.312037 | 3.4:-2912180 | None:intergenic |
| CAAGAAACTGCTATATCTAT+TGG | 0.319476 | 3.4:+2913965 | MS.gene51514:CDS |
| AAATCAAGTTTCCTATAATA+AGG | 0.322804 | 3.4:-2912150 | None:intergenic |
| GGTGACTCATGCTGTCATTT+GGG | 0.323672 | 3.4:+2915617 | MS.gene51514:CDS |
| TTGAAAATGTGGAAGGAAAA+AGG | 0.324840 | 3.4:+2913055 | MS.gene51514:CDS |
| TATAAAGTTGAGGATACTTT+AGG | 0.331612 | 3.4:-2915383 | None:intergenic |
| ATAGATTACTTCTCTTATCT+TGG | 0.335329 | 3.4:-2916544 | None:intergenic |
| GTAGGAATATATTGATCATT+TGG | 0.337392 | 3.4:-2910950 | None:intergenic |
| AGCAGCAGGGATTAAAGTTT+GGG | 0.341999 | 3.4:+2913925 | MS.gene51514:CDS |
| AAACCGAATAGGAATATATA+TGG | 0.343990 | 3.4:+2911829 | MS.gene51514:CDS |
| CAGATAGCTTTGATTATTGA+TGG | 0.344102 | 3.4:+2914115 | MS.gene51514:CDS |
| AAAGCTATGCTCAACAATTC+AGG | 0.344625 | 3.4:+2911982 | MS.gene51514:CDS |
| AATCCATATATATTCCTATT+CGG | 0.351031 | 3.4:-2911832 | None:intergenic |
| GCAGTTTCATTGAGAAGAAA+TGG | 0.361857 | 3.4:+2911596 | MS.gene51514:CDS |
| ACAGATTCAACTCGTCCTTA+TGG | 0.361871 | 3.4:-2912125 | None:intergenic |
| GGGTGACTCATGCTGTCATT+TGG | 0.373060 | 3.4:+2915616 | MS.gene51514:CDS |
| TGGATGTTGTTAGATGGTAT+TGG | 0.375279 | 3.4:+2915595 | MS.gene51514:CDS |
| CTTGGTTGATGATATGAGAT+AGG | 0.382046 | 3.4:-2916526 | None:intergenic |
| GAAGACTAGGTATGCGAAAC+AGG | 0.384864 | 3.4:+2911756 | MS.gene51514:CDS |
| CGCAGTGCTTGCTGCTTCAT+AGG | 0.401952 | 3.4:-2913774 | None:intergenic |
| TACGCCAACGCTTGTTCATC+AGG | 0.402754 | 3.4:-2913183 | None:intergenic |
| GTTGAAGACTATAAGTACTA+TGG | 0.403402 | 3.4:+2912186 | MS.gene51514:CDS |
| TTCAAGTACTGGACTGTTCT+GGG | 0.403555 | 3.4:+2916345 | MS.gene51514:CDS |
| GTGCAAACTATTAATCTTGA+TGG | 0.406142 | 3.4:+2911721 | MS.gene51514:CDS |
| AATAGGCACAATAGTATTGC+AGG | 0.407285 | 3.4:-2913106 | None:intergenic |
| CTTGCCAATTGCAAAAGCTC+TGG | 0.407603 | 3.4:-2913024 | None:intergenic |
| ATAGAAATGTACAAAGCAAT+AGG | 0.408488 | 3.4:-2912270 | None:intergenic |
| ATTGAGTCGCTGAGAGCAGC+AGG | 0.413874 | 3.4:+2913911 | MS.gene51514:CDS |
| AACTGTTCAAACAAATTCCT+TGG | 0.414617 | 3.4:-2911367 | None:intergenic |
| GCACTACCAACTATCATTGT+TGG | 0.415594 | 3.4:+2915327 | MS.gene51514:CDS |
| ACCTAGTTCATTCTCCATGC+TGG | 0.416178 | 3.4:-2912511 | None:intergenic |
| TAACAAGTGTTCTTAAACCT+AGG | 0.418411 | 3.4:-2913703 | None:intergenic |
| GATGCTATACCTCAACTTCC+TGG | 0.419239 | 3.4:+2915678 | MS.gene51514:CDS |
| TGGCTATGGATGTTGTTAGA+TGG | 0.420700 | 3.4:+2915589 | MS.gene51514:CDS |
| CTTCACTCTTACTCTTCCCT+AGG | 0.420906 | 3.4:+2913686 | MS.gene51514:CDS |
| GGATGTTGTTAGATGGTATT+GGG | 0.425040 | 3.4:+2915596 | MS.gene51514:CDS |
| CCACTGCAGGTTCAATGTCT+TGG | 0.425085 | 3.4:+2913505 | MS.gene51514:intron |
| GGAGCTTGTTCGTGTTGGCC+AGG | 0.428817 | 3.4:+2912293 | MS.gene51514:CDS |
| ATCGTCTTCGATCATGAAAT+AGG | 0.432489 | 3.4:-2912316 | None:intergenic |
| AAGGTTCAACCGAGGTATAC+TGG | 0.433990 | 3.4:+2911790 | MS.gene51514:CDS |
| TCAGGTGTGTCAACAACAAT+AGG | 0.437232 | 3.4:-2913123 | None:intergenic |
| GCGTATGCCGCTGCTGCCTA+TGG | 0.452747 | 3.4:+2913201 | MS.gene51514:CDS |
| CACATAGTCATTGATATTCA+TGG | 0.453838 | 3.4:+2913252 | MS.gene51514:CDS |
| CGTCTGTTTGTGCTGCGGTT+TGG | 0.454477 | 3.4:+2912094 | MS.gene51514:CDS |
| TCCATGTCTATTCATTCTAT+GGG | 0.456321 | 3.4:+2911100 | MS.gene51514:CDS |
| TCGAGTGGCTCCACTGCAAA+AGG | 0.458399 | 3.4:+2914389 | MS.gene51514:CDS |
| TAGCAAGCATAGGAGACCTT+TGG | 0.458552 | 3.4:+2915532 | MS.gene51514:CDS |
| CTCAGCGACTCAATTGCTTC+CGG | 0.460307 | 3.4:-2913902 | None:intergenic |
| CACTGGAATTATCAAAGGCT+TGG | 0.461744 | 3.4:+2914742 | MS.gene51514:CDS |
| CTGTTCTGGGCATTGTTGCT+AGG | 0.462546 | 3.4:+2916358 | MS.gene51514:CDS |
| AGAGGGTAGGCAAGCTGTAA+TGG | 0.465745 | 3.4:+2914660 | MS.gene51514:CDS |
| TCAACCAACATTGTGCTTAG+AGG | 0.467223 | 3.4:+2911898 | MS.gene51514:CDS |
| AAAAGAATGTCGGTTATACT+AGG | 0.468898 | 3.4:+2913554 | MS.gene51514:CDS |
| CAAGCACTGCGGTATTTGGT+CGG | 0.469997 | 3.4:+2913786 | MS.gene51514:CDS |
| TACCTCAACTTCCTGGCTAC+TGG | 0.470827 | 3.4:+2915685 | MS.gene51514:CDS |
| GGTCAATTTACATTTGGCTA+TGG | 0.472950 | 3.4:+2915575 | MS.gene51514:CDS |
| ATGCTTATTGAGCGAACCTC+CGG | 0.474232 | 3.4:+2913228 | MS.gene51514:CDS |
| CCTGTGAGGTATGGTTCAAA+AGG | 0.476260 | 3.4:+2911187 | MS.gene51514:CDS |
| TAGAGATGAAGATGCAAGAT+TGG | 0.476919 | 3.4:+2911252 | MS.gene51514:CDS |
| TCTGCACTGAAACTTTGTAT+TGG | 0.477333 | 3.4:-2912358 | None:intergenic |
| AACAGCTTGACATCGGGATC+AGG | 0.478945 | 3.4:-2913141 | None:intergenic |
| GTGGCTCCACTGCAAAAGGC+TGG | 0.484770 | 3.4:+2914393 | MS.gene51514:CDS |
| TATCCTCAACTTTATAGTGC+TGG | 0.490459 | 3.4:+2915390 | MS.gene51514:CDS |
| GTTCCTCTCTTATTGATACA+TGG | 0.491866 | 3.4:+2914718 | MS.gene51514:CDS |
| ATATGTTTCGATTCTACCGT+TGG | 0.493139 | 3.4:+2911465 | MS.gene51514:CDS |
| TATGTGTTCTCAGATAAAAC+TGG | 0.493604 | 3.4:+2912417 | MS.gene51514:CDS |
| GATAAACTATAACTGACATA+AGG | 0.496385 | 3.4:-2912236 | None:intergenic |
| TAAGTACTATGGATGGGGAT+TGG | 0.499992 | 3.4:+2912197 | MS.gene51514:CDS |
| CAGTTCTCACTTTCATTCCA+AGG | 0.502468 | 3.4:+2911350 | MS.gene51514:CDS |
| GTGAGCTTAAGAATACTAGT+TGG | 0.504413 | 3.4:+2911923 | MS.gene51514:CDS |
| TACACTTACTGAAAATAAGA+TGG | 0.509982 | 3.4:+2912440 | MS.gene51514:CDS |
| TGATGTATCAATGATTCAAA+TGG | 0.510962 | 3.4:+2914609 | MS.gene51514:CDS |
| AAGCACTGCGGTATTTGGTC+GGG | 0.512135 | 3.4:+2913787 | MS.gene51514:CDS |
| AAGAATACTAGTTGGGCGCT+TGG | 0.513157 | 3.4:+2911931 | MS.gene51514:CDS |
| TAACAATGGTTGATACTTTG+TGG | 0.514157 | 3.4:+2915451 | MS.gene51514:CDS |
| TCTACTTTCAGTTGATGGAA+AGG | 0.516091 | 3.4:+2912969 | MS.gene51514:intron |
| CTTGGAGATTGTAACAAAAG+TGG | 0.518691 | 3.4:-2910923 | None:intergenic |
| AGAATTCCAACAATGATAGT+TGG | 0.519744 | 3.4:-2915333 | None:intergenic |
| TCTTATTGATACATGGTCAC+TGG | 0.520717 | 3.4:+2914725 | MS.gene51514:CDS |
| CTAGATATTTGAATATCACT+AGG | 0.520868 | 3.4:-2916442 | None:intergenic |
| TAATCTAACAGCTTGACATC+GGG | 0.523706 | 3.4:-2913147 | None:intergenic |
| AAGACTATAAGTACTATGGA+TGG | 0.525277 | 3.4:+2912190 | MS.gene51514:CDS |
| CAACAACTGCAATAAATGAA+TGG | 0.526268 | 3.4:+2915274 | MS.gene51514:CDS |
| TCAGTAAAACTCTTTGTCAA+AGG | 0.526985 | 3.4:+2913590 | MS.gene51514:CDS |
| TGCACATATGCAACACCGGT+TGG | 0.530371 | 3.4:-2911703 | None:intergenic |
| CACTGTCGAGAATGTGTACA+AGG | 0.530496 | 3.4:-2914144 | None:intergenic |
| TGAGCTTAAGAATACTAGTT+GGG | 0.531877 | 3.4:+2911924 | MS.gene51514:CDS |
| TTAAGTGTGAGAAACCGAAT+AGG | 0.534933 | 3.4:+2911818 | MS.gene51514:CDS |
| TCTATGGAGCTTGTTCGTGT+TGG | 0.537946 | 3.4:+2912288 | MS.gene51514:CDS |
| GTCTCAAAGATGCTCTTGAA+AGG | 0.539452 | 3.4:+2914065 | MS.gene51514:CDS |
| TTATCAACTAGTGATCCAAC+CGG | 0.541781 | 3.4:+2911688 | MS.gene51514:CDS |
| GATGTTGGAGTTGGTATAAG+TGG | 0.542521 | 3.4:+2914634 | MS.gene51514:CDS |
| GGTTTGGTTGAAGCGCCATA+AGG | 0.542751 | 3.4:+2912110 | MS.gene51514:CDS |
| CTCAATAAGCATAAAACCAT+AGG | 0.543111 | 3.4:-2913217 | None:intergenic |
| GTGAGAGTAATTTGAAGACT+AGG | 0.544096 | 3.4:+2911743 | MS.gene51514:CDS |
| CTTGGTGTCGCGGTCTATTG+TGG | 0.544779 | 3.4:+2911949 | MS.gene51514:CDS |
| TATTGCAGTTGTTGAAGTGA+AGG | 0.546160 | 3.4:-2915265 | None:intergenic |
| GACTATAAGTACTATGGATG+GGG | 0.549175 | 3.4:+2912192 | MS.gene51514:CDS |
| CAGATGTCCGCTTCTTCACA+AGG | 0.550144 | 3.4:-2914425 | None:intergenic |
| CTTCCAAATACTGCAAGTTG+TGG | 0.550578 | 3.4:-2911442 | None:intergenic |
| AACAAGTGTTCTTAAACCTA+GGG | 0.551707 | 3.4:-2913702 | None:intergenic |
| GCACTTCAGAGTTTGAAGAA+TGG | 0.552085 | 3.4:+2913744 | MS.gene51514:CDS |
| AGTACTTGAAACATGAAAGA+AGG | 0.553632 | 3.4:-2916332 | None:intergenic |
| AAATGGAAGGATATTCGAGT+TGG | 0.553978 | 3.4:+2911613 | MS.gene51514:CDS |
| TCTAAGTTCTCTTTGTGACA+TGG | 0.558340 | 3.4:-2911233 | None:intergenic |
| GTAATCTAACAGCTTGACAT+CGG | 0.559765 | 3.4:-2913148 | None:intergenic |
| AAAGGTGGTGGTGATTCTGA+AGG | 0.562096 | 3.4:+2911205 | MS.gene51514:CDS |
| CAAATGGCTGATGTTGGAGT+TGG | 0.562565 | 3.4:+2914625 | MS.gene51514:CDS |
| TGTCGTTCTTTGTTGTCGAG+TGG | 0.562870 | 3.4:+2914374 | MS.gene51514:CDS |
| ATTCTATGGGTTCTAGCAAG+AGG | 0.565142 | 3.4:+2911113 | MS.gene51514:CDS |
| GTGAATACATACCAGTAGCC+AGG | 0.565559 | 3.4:-2915696 | None:intergenic |
| ATGATTCAAATGGCTGATGT+TGG | 0.567389 | 3.4:+2914619 | MS.gene51514:CDS |
| AGACTATAAGTACTATGGAT+GGG | 0.568634 | 3.4:+2912191 | MS.gene51514:CDS |
| TTGTTTCCCTTGTGAAGAAG+CGG | 0.568943 | 3.4:+2914418 | MS.gene51514:CDS |
| TAAACTTCAACAAGGTGTGC+CGG | 0.569652 | 3.4:+2913883 | MS.gene51514:CDS |
| CTTCGATCATGAAATAGGCC+TGG | 0.570695 | 3.4:-2912311 | None:intergenic |
| GTTGGTATAAGTGGACAAGA+GGG | 0.570884 | 3.4:+2914643 | MS.gene51514:CDS |
| AGACCTTTGGACTCTTGCTG+TGG | 0.571885 | 3.4:+2915545 | MS.gene51514:CDS |
| TACCAGTAGCCAGGAAGTTG+AGG | 0.574838 | 3.4:-2915687 | None:intergenic |
| GTTCATCAGGCGATTCACCT+TGG | 0.579840 | 3.4:-2913170 | None:intergenic |
| TGGAAACATTGCTTTCAACA+TGG | 0.580153 | 3.4:-2913835 | None:intergenic |
| TTTGTCTATTACACTAAACA+TGG | 0.584696 | 3.4:-2913624 | None:intergenic |
| TGATACTTTGTGGCAAAGCA+TGG | 0.585733 | 3.4:+2915461 | MS.gene51514:CDS |
| GTGACTCATGCTGTCATTTG+GGG | 0.586654 | 3.4:+2915618 | MS.gene51514:CDS |
| GAGCTCCATCGAAAAGAAGT+AGG | 0.587843 | 3.4:+2912004 | MS.gene51514:CDS |
| TAGTTGGGCGCTTGGTGTCG+CGG | 0.589231 | 3.4:+2911939 | MS.gene51514:CDS |
| AATGGAGTTGAAAATGTGGA+AGG | 0.590116 | 3.4:+2913048 | MS.gene51514:CDS |
| CGACAGTGAACACGAAGAAG+AGG | 0.590159 | 3.4:+2914159 | MS.gene51514:CDS |
| AATATCAATGACTATGTGGC+CGG | 0.590915 | 3.4:-2913247 | None:intergenic |
| ATGACACTAGCCATCGGAGA+TGG | 0.592031 | 3.4:+2914450 | MS.gene51514:CDS |
| ACTATTGATATAGCAAGCAT+AGG | 0.593863 | 3.4:+2915522 | MS.gene51514:CDS |
| TGTCCAGCACTATAAAGTTG+AGG | 0.593916 | 3.4:-2915393 | None:intergenic |
| ATGGTCACTGGAATTATCAA+AGG | 0.595865 | 3.4:+2914737 | MS.gene51514:CDS |
| TTTCATTGAGAAGAAATGGA+AGG | 0.598082 | 3.4:+2911600 | MS.gene51514:CDS |
| ATAGCTTTGATTATTGATGG+TGG | 0.600389 | 3.4:+2914118 | MS.gene51514:CDS |
| AGGTATGCGAAACAGGAGAC+AGG | 0.600615 | 3.4:+2911763 | MS.gene51514:CDS |
| ACCCATAGAATGAATAGACA+TGG | 0.603696 | 3.4:-2911101 | None:intergenic |
| CATAAAACCATAGGCAGCAG+CGG | 0.605167 | 3.4:-2913208 | None:intergenic |
| ACCAGCATGGAGAATGAACT+AGG | 0.608676 | 3.4:+2912510 | MS.gene51514:CDS |
| AGTTGGTATAAGTGGACAAG+AGG | 0.609765 | 3.4:+2914642 | MS.gene51514:CDS |
| GAAACAGGAGACAGGTTCAA+AGG | 0.611978 | 3.4:+2911771 | MS.gene51514:CDS |
| ACATCCTCTAAGCACAATGT+TGG | 0.612946 | 3.4:-2911902 | None:intergenic |
| TGAATATTAATGAAGATTTG+GGG | 0.616519 | 3.4:+2912385 | MS.gene51514:CDS |
| CTAGGTGAATACTCAGTGCA+AGG | 0.616609 | 3.4:+2912528 | MS.gene51514:CDS |
| ATCGCCTGATGAACAAGCGT+TGG | 0.617081 | 3.4:+2913179 | MS.gene51514:CDS |
| CAAGAGGAACAATTCTGTGA+GGG | 0.617307 | 3.4:+2911129 | MS.gene51514:CDS |
| TTCCAATATGCAAAGAGTGG+AGG | 0.618565 | 3.4:-2915495 | None:intergenic |
| AGGTATGGTTCAAAAGGTGG+TGG | 0.619167 | 3.4:+2911193 | MS.gene51514:CDS |
| ATGGCGAATATGGAAATCGA+TGG | 0.624834 | 3.4:+2911856 | MS.gene51514:CDS |
| GATGGTAAGAAGTTATCACT+TGG | 0.629993 | 3.4:+2911874 | MS.gene51514:CDS |
| TTTCAATGTGCAAGCATACG+AGG | 0.630431 | 3.4:+2912465 | MS.gene51514:CDS |
| TGAGCATAGCTTTAGTCTCG+CGG | 0.631072 | 3.4:-2911972 | None:intergenic |
| AACTTGACCGAATTCAACAC+CGG | 0.633049 | 3.4:-2911035 | None:intergenic |
| GTATAAGTGGACAAGAGGGT+AGG | 0.639872 | 3.4:+2914647 | MS.gene51514:CDS |
| AGAGTGAAGATGAGTTTCTG+TGG | 0.644608 | 3.4:-2913672 | None:intergenic |
| ATCAATGACTATGTGGCCGG+AGG | 0.646233 | 3.4:-2913244 | None:intergenic |
| AAGGTGGTGGTGATTCTGAA+GGG | 0.646912 | 3.4:+2911206 | MS.gene51514:CDS |
| CATGAATATCAATGACTATG+TGG | 0.647298 | 3.4:-2913251 | None:intergenic |
| AGACGATCGATTGTATGATG+AGG | 0.647562 | 3.4:+2912332 | MS.gene51514:CDS |
| GTGAGGTATGGTTCAAAAGG+TGG | 0.648541 | 3.4:+2911190 | MS.gene51514:CDS |
| TAACCACAGCAAGAGTCCAA+AGG | 0.648616 | 3.4:-2915548 | None:intergenic |
| AATCACGTCTGTTTGTGCTG+CGG | 0.649507 | 3.4:+2912089 | MS.gene51514:CDS |
| TGACCATGTATCAATAAGAG+AGG | 0.653984 | 3.4:-2914721 | None:intergenic |
| AAAGTCAAGTTCAAGCAACA+CGG | 0.660660 | 3.4:+2911003 | MS.gene51514:CDS |
| ACAAACAGAACAAAAGCCAA+CGG | 0.667705 | 3.4:-2911481 | None:intergenic |
| AGTTTGCACATATGCAACAC+CGG | 0.667720 | 3.4:-2911707 | None:intergenic |
| ACCAAAATAGGACAAGAACA+AGG | 0.674548 | 3.4:-2914801 | None:intergenic |
| AAGAAATGGAGTTGAAAATG+TGG | 0.674807 | 3.4:+2913044 | MS.gene51514:CDS |
| AGAACTCGTACCATCTCCGA+TGG | 0.678340 | 3.4:-2914460 | None:intergenic |
| GTCAAGCTGTTAGATTACCA+AGG | 0.681261 | 3.4:+2913153 | MS.gene51514:CDS |
| AGATGTCCGCTTCTTCACAA+GGG | 0.683316 | 3.4:-2914424 | None:intergenic |
| TTAATCAAACCAGTATACCT+CGG | 0.685339 | 3.4:-2911799 | None:intergenic |
| TCTGACATGACACTAGCCAT+CGG | 0.686147 | 3.4:+2914444 | MS.gene51514:CDS |
| GCAAGAGGAACAATTCTGTG+AGG | 0.696594 | 3.4:+2911128 | MS.gene51514:CDS |
| TTGAGTCGCTGAGAGCAGCA+GGG | 0.700401 | 3.4:+2913912 | MS.gene51514:CDS |
| AATAGACAAATCACACAACA+CGG | 0.706155 | 3.4:+2913637 | MS.gene51514:CDS |
| GATAACAAAACAATATCACA+AGG | 0.711577 | 3.4:-2911670 | None:intergenic |
| ATTGAAGATAAACTTCAACA+AGG | 0.716876 | 3.4:+2913875 | MS.gene51514:CDS |
| GTAGATTATTGAGTACAATG+TGG | 0.727917 | 3.4:-2915301 | None:intergenic |
| AAAGAAGTAGGCTAGAGACA+CGG | 0.729257 | 3.4:+2912016 | MS.gene51514:CDS |
| CAGGTTCAAAGGTTCAACCG+AGG | 0.752179 | 3.4:+2911782 | MS.gene51514:CDS |
| CTATGAAGCAGCAAGCACTG+CGG | 0.760073 | 3.4:+2913775 | MS.gene51514:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGTTTCATTTAAATACTA+CGG | + | chr3.4:2915877-2915896 | MS.gene51514:intron | 15.0% |
| !! | AATTATGATAGAAATAGAAT+AGG | - | chr3.4:2915731-2915750 | None:intergenic | 15.0% |
| !! | ATTATGATAGAAATAGAATA+GGG | - | chr3.4:2915730-2915749 | None:intergenic | 15.0% |
| !! | GTTCATTATATGAATATATA+AGG | - | chr3.4:2912818-2912837 | None:intergenic | 15.0% |
| !! | TAAAAATCTCTAAATAATTC+AGG | + | chr3.4:2914228-2914247 | MS.gene51514:intron | 15.0% |
| !! | TTGAATATTAATGAAGATTT+GGG | + | chr3.4:2912384-2912403 | MS.gene51514:CDS | 15.0% |
| !! | TTTGAATATTAATGAAGATT+TGG | + | chr3.4:2912383-2912402 | MS.gene51514:CDS | 15.0% |
| !!! | AATTTTTTCGCTTTAATATT+CGG | - | chr3.4:2914555-2914574 | None:intergenic | 15.0% |
| !!! | ATTTAAATTTTCTATCTTCA+AGG | - | chr3.4:2915921-2915940 | None:intergenic | 15.0% |
| !!! | TATTTATTTATAAGTTGACA+TGG | - | chr3.4:2916165-2916184 | None:intergenic | 15.0% |
| !!! | TTTTAAATGCATATAAAGTA+TGG | - | chr3.4:2916233-2916252 | None:intergenic | 15.0% |
| !! | AAATCAAGTTTCCTATAATA+AGG | - | chr3.4:2912153-2912172 | None:intergenic | 20.0% |
| !! | AATCCATATATATTCCTATT+CGG | - | chr3.4:2911835-2911854 | None:intergenic | 20.0% |
| !! | ATGGTTTATCATATCATATA+TGG | + | chr3.4:2914841-2914860 | MS.gene51514:intron | 20.0% |
| !! | GACTGTCAATATATAATTAA+GGG | + | chr3.4:2914929-2914948 | MS.gene51514:intron | 20.0% |
| !! | TAGGAATATATATGGATTTA+TGG | + | chr3.4:2911837-2911856 | MS.gene51514:CDS | 20.0% |
| !! | TGAATATTAATGAAGATTTG+GGG | + | chr3.4:2912385-2912404 | MS.gene51514:CDS | 20.0% |
| !! | TTAGTTTCATTATATCTTGT+TGG | + | chr3.4:2914182-2914201 | MS.gene51514:intron | 20.0% |
| !! | TTATAATTCGAATCAGATAA+AGG | + | chr3.4:2912643-2912662 | MS.gene51514:intron | 20.0% |
| !! | TTTCTTCTAAATATTTCTCA+AGG | - | chr3.4:2916002-2916021 | None:intergenic | 20.0% |
| !!! | AACTTTAAGATAATATTTGG+TGG | + | chr3.4:2916104-2916123 | MS.gene51514:intron | 20.0% |
| !!! | AATGAGAATTTTGAGTTTTT+CGG | + | chr3.4:2911301-2911320 | MS.gene51514:CDS | 20.0% |
| !!! | CAAATTTAAGATGTATAGAA+TGG | - | chr3.4:2916197-2916216 | None:intergenic | 20.0% |
| !!! | CTCAACTTTAAGATAATATT+TGG | + | chr3.4:2916101-2916120 | MS.gene51514:intron | 20.0% |
| !!! | TAGAATAGGTTTTACTAAAA+AGG | - | chr3.4:2916025-2916044 | None:intergenic | 20.0% |
| !!! | TATTTTGGTCAATTTACATT+TGG | + | chr3.4:2915569-2915588 | MS.gene51514:CDS | 20.0% |
| ! | AAACCGAATAGGAATATATA+TGG | + | chr3.4:2911829-2911848 | MS.gene51514:CDS | 25.0% |
| ! | AAAGCAATGTATAATTGCAA+AGG | - | chr3.4:2916256-2916275 | None:intergenic | 25.0% |
| ! | AGAACATACCTAAAAAACAA+AGG | - | chr3.4:2915237-2915256 | None:intergenic | 25.0% |
| ! | ATAGAAATGTACAAAGCAAT+AGG | - | chr3.4:2912273-2912292 | None:intergenic | 25.0% |
| ! | ATCTTGTTGGAATTATGTTT+AGG | + | chr3.4:2914195-2914214 | MS.gene51514:intron | 25.0% |
| ! | ATTGAAGATAAACTTCAACA+AGG | + | chr3.4:2913875-2913894 | MS.gene51514:CDS | 25.0% |
| ! | CTAGATATTTGAATATCACT+AGG | - | chr3.4:2916445-2916464 | None:intergenic | 25.0% |
| ! | CTAGTAAAAAATGTACTGAA+AGG | - | chr3.4:2914514-2914533 | None:intergenic | 25.0% |
| ! | GAAAAACTCAAAATTCTCAT+TGG | - | chr3.4:2911302-2911321 | None:intergenic | 25.0% |
| ! | GATAAACTATAACTGACATA+AGG | - | chr3.4:2912239-2912258 | None:intergenic | 25.0% |
| ! | GATAACAAAACAATATCACA+AGG | - | chr3.4:2911673-2911692 | None:intergenic | 25.0% |
| ! | GGACTGTCAATATATAATTA+AGG | + | chr3.4:2914928-2914947 | MS.gene51514:intron | 25.0% |
| ! | GTAGAAAAATCACTTAGAAT+AGG | - | chr3.4:2916039-2916058 | None:intergenic | 25.0% |
| ! | GTAGGAATATATTGATCATT+TGG | - | chr3.4:2910953-2910972 | None:intergenic | 25.0% |
| ! | TACACTTACTGAAAATAAGA+TGG | + | chr3.4:2912440-2912459 | MS.gene51514:CDS | 25.0% |
| ! | TATAAAGTTGAGGATACTTT+AGG | - | chr3.4:2915386-2915405 | None:intergenic | 25.0% |
| ! | TATTATCTTAAAGTTGAGAC+TGG | - | chr3.4:2916099-2916118 | None:intergenic | 25.0% |
| ! | TATTGCTTTGTACATTTCTA+TGG | + | chr3.4:2912272-2912291 | MS.gene51514:CDS | 25.0% |
| ! | TGATATGATAAACCATTTGT+TGG | - | chr3.4:2914837-2914856 | None:intergenic | 25.0% |
| ! | TGATGTATCAATGATTCAAA+TGG | + | chr3.4:2914609-2914628 | MS.gene51514:CDS | 25.0% |
| ! | TTAACTTTCACATTCATCTT+TGG | - | chr3.4:2913003-2913022 | None:intergenic | 25.0% |
| ! | TTTGTCTATTACACTAAACA+TGG | - | chr3.4:2913627-2913646 | None:intergenic | 25.0% |
| !! | ATATATTTTACAACCAAACG+TGG | - | chr3.4:2916406-2916425 | None:intergenic | 25.0% |
| !! | ATTTAAGATGTATAGAATGG+TGG | - | chr3.4:2916194-2916213 | None:intergenic | 25.0% |
| !!! | ATCAGGGTTTTATAGATAAT+TGG | + | chr3.4:2914907-2914926 | MS.gene51514:intron | 25.0% |
| !!! | GAAACTGTTTTTGTTAACAA+TGG | + | chr3.4:2915437-2915456 | MS.gene51514:CDS | 25.0% |
| AACAAGTGTTCTTAAACCTA+GGG | - | chr3.4:2913705-2913724 | None:intergenic | 30.0% | |
| AACAATACCAGATGCATTAA+AGG | - | chr3.4:2912624-2912643 | None:intergenic | 30.0% | |
| AACTGTTCAAACAAATTCCT+TGG | - | chr3.4:2911370-2911389 | None:intergenic | 30.0% | |
| AAGAAATGGAGTTGAAAATG+TGG | + | chr3.4:2913044-2913063 | MS.gene51514:CDS | 30.0% | |
| AAGACTATAAGTACTATGGA+TGG | + | chr3.4:2912190-2912209 | MS.gene51514:CDS | 30.0% | |
| AATAGACAAATCACACAACA+CGG | + | chr3.4:2913637-2913656 | MS.gene51514:CDS | 30.0% | |
| ACTATTGATATAGCAAGCAT+AGG | + | chr3.4:2915522-2915541 | MS.gene51514:CDS | 30.0% | |
| AGAATTCCAACAATGATAGT+TGG | - | chr3.4:2915336-2915355 | None:intergenic | 30.0% | |
| AGACTATAAGTACTATGGAT+GGG | + | chr3.4:2912191-2912210 | MS.gene51514:CDS | 30.0% | |
| AGTACTTGAAACATGAAAGA+AGG | - | chr3.4:2916335-2916354 | None:intergenic | 30.0% | |
| ATATGGATTTATGGCGAATA+TGG | + | chr3.4:2911846-2911865 | MS.gene51514:CDS | 30.0% | |
| ATGAGTAGTTTAAACCATTC+AGG | + | chr3.4:2911154-2911173 | MS.gene51514:CDS | 30.0% | |
| CAACAACTGCAATAAATGAA+TGG | + | chr3.4:2915274-2915293 | MS.gene51514:CDS | 30.0% | |
| CAAGAAACTGCTATATCTAT+TGG | + | chr3.4:2913965-2913984 | MS.gene51514:CDS | 30.0% | |
| CACATAGTCATTGATATTCA+TGG | + | chr3.4:2913252-2913271 | MS.gene51514:CDS | 30.0% | |
| CAGATAAAGTTGAGAATAAC+AGG | + | chr3.4:2911548-2911567 | MS.gene51514:CDS | 30.0% | |
| CAGTGATAGAAAAAGAATGT+CGG | + | chr3.4:2913544-2913563 | MS.gene51514:CDS | 30.0% | |
| CATATAAAGTATGGTAGCAA+AGG | - | chr3.4:2916224-2916243 | None:intergenic | 30.0% | |
| CATGAATATCAATGACTATG+TGG | - | chr3.4:2913254-2913273 | None:intergenic | 30.0% | |
| CTCAATAAGCATAAAACCAT+AGG | - | chr3.4:2913220-2913239 | None:intergenic | 30.0% | |
| CTGGTTAAAACAGTTCAAAT+AGG | + | chr3.4:2912712-2912731 | MS.gene51514:intron | 30.0% | |
| GAAAGCAATGTTTCCATATT+AGG | + | chr3.4:2913842-2913861 | MS.gene51514:CDS | 30.0% | |
| GAGAAAGATTCATTAGAATG+TGG | - | chr3.4:2913478-2913497 | None:intergenic | 30.0% | |
| GTAGATTATTGAGTACAATG+TGG | - | chr3.4:2915304-2915323 | None:intergenic | 30.0% | |
| GTGCAAACTATTAATCTTGA+TGG | + | chr3.4:2911721-2911740 | MS.gene51514:CDS | 30.0% | |
| GTTAAAACAGTTCAAATAGG+TGG | + | chr3.4:2912715-2912734 | MS.gene51514:intron | 30.0% | |
| GTTGAAGACTATAAGTACTA+TGG | + | chr3.4:2912186-2912205 | MS.gene51514:CDS | 30.0% | |
| TAACAAGTGTTCTTAAACCT+AGG | - | chr3.4:2913706-2913725 | None:intergenic | 30.0% | |
| TACTTATAGTCTTCAACTTC+CGG | - | chr3.4:2912183-2912202 | None:intergenic | 30.0% | |
| TATCAAAGAGTTGCTGAAAA+TGG | + | chr3.4:2916487-2916506 | MS.gene51514:CDS | 30.0% | |
| TATGTGTTCTCAGATAAAAC+TGG | + | chr3.4:2912417-2912436 | MS.gene51514:CDS | 30.0% | |
| TATTGTCTACTTTCAGTTGA+TGG | + | chr3.4:2912964-2912983 | MS.gene51514:intron | 30.0% | |
| TCAAGGTTAATCTTGTAATC+TGG | - | chr3.4:2915904-2915923 | None:intergenic | 30.0% | |
| TCAGTAAAACTCTTTGTCAA+AGG | + | chr3.4:2913590-2913609 | MS.gene51514:CDS | 30.0% | |
| TCCATGTCTATTCATTCTAT+GGG | + | chr3.4:2911100-2911119 | MS.gene51514:CDS | 30.0% | |
| TCGCGAAAGTTGTTTAAATT+TGG | - | chr3.4:2912681-2912700 | None:intergenic | 30.0% | |
| TGAGCTTAAGAATACTAGTT+GGG | + | chr3.4:2911924-2911943 | MS.gene51514:CDS | 30.0% | |
| TTAATCAAACCAGTATACCT+CGG | - | chr3.4:2911802-2911821 | None:intergenic | 30.0% | |
| TTAATGCAGCTTAAATAGGT+AGG | - | chr3.4:2912848-2912867 | None:intergenic | 30.0% | |
| TTCCATGTCTATTCATTCTA+TGG | + | chr3.4:2911099-2911118 | MS.gene51514:CDS | 30.0% | |
| TTCGAAGATATACACACAAT+TGG | - | chr3.4:2915805-2915824 | None:intergenic | 30.0% | |
| TTGAAAATGTGGAAGGAAAA+AGG | + | chr3.4:2913055-2913074 | MS.gene51514:CDS | 30.0% | |
| TTTCATTGAGAAGAAATGGA+AGG | + | chr3.4:2911600-2911619 | MS.gene51514:CDS | 30.0% | |
| ! | AAAAGAATGTCGGTTATACT+AGG | + | chr3.4:2913554-2913573 | MS.gene51514:CDS | 30.0% |
| ! | CAAAAACAGTTTCTTGTTGT+AGG | - | chr3.4:2915430-2915449 | None:intergenic | 30.0% |
| ! | GAGTACAATATCTGAAACTA+GGG | - | chr3.4:2915134-2915153 | None:intergenic | 30.0% |
| ! | TAACAATGGTTGATACTTTG+TGG | + | chr3.4:2915451-2915470 | MS.gene51514:CDS | 30.0% |
| ! | TGAATCTGTTGCCTTATTAT+AGG | + | chr3.4:2912139-2912158 | MS.gene51514:CDS | 30.0% |
| ! | TGAGTACAATATCTGAAACT+AGG | - | chr3.4:2915135-2915154 | None:intergenic | 30.0% |
| ! | TTCTTTCATGTTTCAAGTAC+TGG | + | chr3.4:2916334-2916353 | MS.gene51514:CDS | 30.0% |
| ! | TTTCGCGAAAAATTTTCAAC+TGG | + | chr3.4:2912693-2912712 | MS.gene51514:intron | 30.0% |
| ! | TTTTGCGACAATAATCTAAG+TGG | - | chr3.4:2912871-2912890 | None:intergenic | 30.0% |
| !! | ATAGCTTTGATTATTGATGG+TGG | + | chr3.4:2914118-2914137 | MS.gene51514:CDS | 30.0% |
| !! | ATTAAAGTTTGGGTTTTGAC+TGG | + | chr3.4:2913935-2913954 | MS.gene51514:CDS | 30.0% |
| !! | CAGATAGCTTTGATTATTGA+TGG | + | chr3.4:2914115-2914134 | MS.gene51514:CDS | 30.0% |
| !! | CTTGAACTTGACTTTGATTT+TGG | - | chr3.4:2910998-2911017 | None:intergenic | 30.0% |
| !! | GAAACTTGATTTTTCAAAGC+CGG | + | chr3.4:2912161-2912180 | MS.gene51514:CDS | 30.0% |
| !! | GCAACAATTTTGATGAATGA+TGG | + | chr3.4:2911574-2911593 | MS.gene51514:CDS | 30.0% |
| !! | GGTTTAAGAACACTTGTTAT+TGG | + | chr3.4:2913707-2913726 | MS.gene51514:CDS | 30.0% |
| !! | TATTGATCATTTGGTGTTCT+TGG | - | chr3.4:2910944-2910963 | None:intergenic | 30.0% |
| !!! | AAATTCTCATTGGTTTTCTC+AGG | - | chr3.4:2911292-2911311 | None:intergenic | 30.0% |
| AAAGCTATGCTCAACAATTC+AGG | + | chr3.4:2911982-2912001 | MS.gene51514:CDS | 35.0% | |
| AAAGTCAAGTTCAAGCAACA+CGG | + | chr3.4:2911003-2911022 | MS.gene51514:CDS | 35.0% | |
| AAATGGAAGGATATTCGAGT+TGG | + | chr3.4:2911613-2911632 | MS.gene51514:CDS | 35.0% | |
| AACATTGCCTTTAATGCATC+TGG | + | chr3.4:2912614-2912633 | MS.gene51514:intron | 35.0% | |
| AATAGCAGATGCTCCTAATA+TGG | - | chr3.4:2913858-2913877 | None:intergenic | 35.0% | |
| AATAGGCACAATAGTATTGC+AGG | - | chr3.4:2913109-2913128 | None:intergenic | 35.0% | |
| AATATCAATGACTATGTGGC+CGG | - | chr3.4:2913250-2913269 | None:intergenic | 35.0% | |
| AATGCAACTTATTAACCACG+AGG | - | chr3.4:2912774-2912793 | None:intergenic | 35.0% | |
| AATGGAGTTGAAAATGTGGA+AGG | + | chr3.4:2913048-2913067 | MS.gene51514:CDS | 35.0% | |
| ACAAACAGAACAAAAGCCAA+CGG | - | chr3.4:2911484-2911503 | None:intergenic | 35.0% | |
| ACCAAAATAGGACAAGAACA+AGG | - | chr3.4:2914804-2914823 | None:intergenic | 35.0% | |
| ACCCATAGAATGAATAGACA+TGG | - | chr3.4:2911104-2911123 | None:intergenic | 35.0% | |
| ATATGTTTCGATTCTACCGT+TGG | + | chr3.4:2911465-2911484 | MS.gene51514:CDS | 35.0% | |
| ATCGTCTTCGATCATGAAAT+AGG | - | chr3.4:2912319-2912338 | None:intergenic | 35.0% | |
| ATGATTCAAATGGCTGATGT+TGG | + | chr3.4:2914619-2914638 | MS.gene51514:CDS | 35.0% | |
| ATGGTCACTGGAATTATCAA+AGG | + | chr3.4:2914737-2914756 | MS.gene51514:CDS | 35.0% | |
| CTTGGAGATTGTAACAAAAG+TGG | - | chr3.4:2910926-2910945 | None:intergenic | 35.0% | |
| GACTATAAGTACTATGGATG+GGG | + | chr3.4:2912192-2912211 | MS.gene51514:CDS | 35.0% | |
| GATGGTAAGAAGTTATCACT+TGG | + | chr3.4:2911874-2911893 | MS.gene51514:CDS | 35.0% | |
| GCAGTTTCATTGAGAAGAAA+TGG | + | chr3.4:2911596-2911615 | MS.gene51514:CDS | 35.0% | |
| GGATGTTGTTAGATGGTATT+GGG | + | chr3.4:2915596-2915615 | MS.gene51514:CDS | 35.0% | |
| GGATTGTGACTTACCAAAAT+AGG | - | chr3.4:2914816-2914835 | None:intergenic | 35.0% | |
| GGTCAATTTACATTTGGCTA+TGG | + | chr3.4:2915575-2915594 | MS.gene51514:CDS | 35.0% | |
| GTAAGTCACAATCCAACAAA+TGG | + | chr3.4:2914822-2914841 | MS.gene51514:intron | 35.0% | |
| GTAATCTAACAGCTTGACAT+CGG | - | chr3.4:2913151-2913170 | None:intergenic | 35.0% | |
| GTATCCATGTGTTACATTAC+AGG | + | chr3.4:2914580-2914599 | MS.gene51514:intron | 35.0% | |
| GTGAGAGTAATTTGAAGACT+AGG | + | chr3.4:2911743-2911762 | MS.gene51514:CDS | 35.0% | |
| GTGAGCTTAAGAATACTAGT+TGG | + | chr3.4:2911923-2911942 | MS.gene51514:CDS | 35.0% | |
| GTGGTTAATGCAGCTTAAAT+AGG | - | chr3.4:2912852-2912871 | None:intergenic | 35.0% | |
| GTTCCTCTCTTATTGATACA+TGG | + | chr3.4:2914718-2914737 | MS.gene51514:CDS | 35.0% | |
| TAATCTAACAGCTTGACATC+GGG | - | chr3.4:2913150-2913169 | None:intergenic | 35.0% | |
| TAGAGATGAAGATGCAAGAT+TGG | + | chr3.4:2911252-2911271 | MS.gene51514:CDS | 35.0% | |
| TATCCTCAACTTTATAGTGC+TGG | + | chr3.4:2915390-2915409 | MS.gene51514:CDS | 35.0% | |
| TATTGCAGTTGTTGAAGTGA+AGG | - | chr3.4:2915268-2915287 | None:intergenic | 35.0% | |
| TCAAAAAATCCTGTGAGGTA+TGG | + | chr3.4:2911178-2911197 | MS.gene51514:CDS | 35.0% | |
| TCAGGAAAAACTGGTATTGT+AGG | - | chr3.4:2910971-2910990 | None:intergenic | 35.0% | |
| TCTAAGTTCTCTTTGTGACA+TGG | - | chr3.4:2911236-2911255 | None:intergenic | 35.0% | |
| TCTGCACTGAAACTTTGTAT+TGG | - | chr3.4:2912361-2912380 | None:intergenic | 35.0% | |
| TCTTATTGATACATGGTCAC+TGG | + | chr3.4:2914725-2914744 | MS.gene51514:CDS | 35.0% | |
| TGACCATGTATCAATAAGAG+AGG | - | chr3.4:2914724-2914743 | None:intergenic | 35.0% | |
| TGATGTTTGTGTCAGTATCA+GGG | + | chr3.4:2914891-2914910 | MS.gene51514:intron | 35.0% | |
| TGGAAACATTGCTTTCAACA+TGG | - | chr3.4:2913838-2913857 | None:intergenic | 35.0% | |
| TGGATGTTGTTAGATGGTAT+TGG | + | chr3.4:2915595-2915614 | MS.gene51514:CDS | 35.0% | |
| TTAAGTGTGAGAAACCGAAT+AGG | + | chr3.4:2911818-2911837 | MS.gene51514:CDS | 35.0% | |
| TTATCAACTAGTGATCCAAC+CGG | + | chr3.4:2911688-2911707 | MS.gene51514:CDS | 35.0% | |
| TTCCTAACTTTGACATTGCA+GGG | + | chr3.4:2916309-2916328 | MS.gene51514:intron | 35.0% | |
| TTGATGTTTGTGTCAGTATC+AGG | + | chr3.4:2914890-2914909 | MS.gene51514:intron | 35.0% | |
| TTTCCTAACTTTGACATTGC+AGG | + | chr3.4:2916308-2916327 | MS.gene51514:intron | 35.0% | |
| ! | AACTAGGGTTTAGTCTCTTT+TGG | - | chr3.4:2915119-2915138 | None:intergenic | 35.0% |
| ! | AAGAGTTTTACTGAACTGTC+AGG | - | chr3.4:2913584-2913603 | None:intergenic | 35.0% |
| ! | AATGGCATCAGATTTTGCAA+TGG | + | chr3.4:2914678-2914697 | MS.gene51514:CDS | 35.0% |
| ! | ACTGCAGCGTATGTATTTTT+AGG | + | chr3.4:2913326-2913345 | MS.gene51514:intron | 35.0% |
| ! | AGAGTTTTACTGAACTGTCA+GGG | - | chr3.4:2913583-2913602 | None:intergenic | 35.0% |
| ! | ATGGCATCAGATTTTGCAAT+GGG | + | chr3.4:2914679-2914698 | MS.gene51514:CDS | 35.0% |
| ! | ATTTTGCAATGGGACAGTTT+AGG | + | chr3.4:2914689-2914708 | MS.gene51514:CDS | 35.0% |
| ! | CTTTTCCAATATGCAAAGAG+TGG | - | chr3.4:2915501-2915520 | None:intergenic | 35.0% |
| ! | CTTTTGCAATTGGCAAGAAA+TGG | + | chr3.4:2913030-2913049 | MS.gene51514:CDS | 35.0% |
| ! | TAAAGTTGAGACTGGTTACA+TGG | - | chr3.4:2916091-2916110 | None:intergenic | 35.0% |
| ! | TAATCCAGAGCTTTTGCAAT+TGG | + | chr3.4:2913020-2913039 | MS.gene51514:CDS | 35.0% |
| ! | TCCTTGTTCTTGTCCTATTT+TGG | + | chr3.4:2914800-2914819 | MS.gene51514:CDS | 35.0% |
| !! | ACATTTTCCGGTGTTGAATT+CGG | + | chr3.4:2911028-2911047 | MS.gene51514:CDS | 35.0% |
| !! | CTGCAGCGTATGTATTTTTA+GGG | + | chr3.4:2913327-2913346 | MS.gene51514:intron | 35.0% |
| !! | CTTGGTTGATGATATGAGAT+AGG | - | chr3.4:2916529-2916548 | None:intergenic | 35.0% |
| !! | GCTTTTGTTCTGTTTGTTAC+TGG | + | chr3.4:2911487-2911506 | MS.gene51514:CDS | 35.0% |
| !! | TCTACTTTCAGTTGATGGAA+AGG | + | chr3.4:2912969-2912988 | MS.gene51514:intron | 35.0% |
| !! | TGAAAGATGCTTTTGAGGAT+TGG | + | chr3.4:2911512-2911531 | MS.gene51514:CDS | 35.0% |
| !!! | CAGGATTTTTTGATCCTGAA+TGG | - | chr3.4:2911171-2911190 | None:intergenic | 35.0% |
| !!! | GTTGTGTGCCTTTGTTTTTT+AGG | + | chr3.4:2915226-2915245 | MS.gene51514:intron | 35.0% |
| AAAGAAGTAGGCTAGAGACA+CGG | + | chr3.4:2912016-2912035 | MS.gene51514:CDS | 40.0% | |
| AACTTGACCGAATTCAACAC+CGG | - | chr3.4:2911038-2911057 | None:intergenic | 40.0% | |
| AATTTGTAACGCGAGTGTCT+AGG | + | chr3.4:2913386-2913405 | MS.gene51514:intron | 40.0% | |
| ACAGATTCAACTCGTCCTTA+TGG | - | chr3.4:2912128-2912147 | None:intergenic | 40.0% | |
| ACATCCTCTAAGCACAATGT+TGG | - | chr3.4:2911905-2911924 | None:intergenic | 40.0% | |
| AGACGATCGATTGTATGATG+AGG | + | chr3.4:2912332-2912351 | MS.gene51514:CDS | 40.0% | |
| AGAGTGAAGATGAGTTTCTG+TGG | - | chr3.4:2913675-2913694 | None:intergenic | 40.0% | |
| AGCACCTGTAATGTAACACA+TGG | - | chr3.4:2914587-2914606 | None:intergenic | 40.0% | |
| AGCAGCAGGGATTAAAGTTT+GGG | + | chr3.4:2913925-2913944 | MS.gene51514:CDS | 40.0% | |
| AGTTTGCACATATGCAACAC+CGG | - | chr3.4:2911710-2911729 | None:intergenic | 40.0% | |
| ATACGCTGCAGTTACGATTA+TGG | - | chr3.4:2913318-2913337 | None:intergenic | 40.0% | |
| ATGCCTTGAGAATGATCTCA+AGG | - | chr3.4:2915094-2915113 | None:intergenic | 40.0% | |
| ATGGCGAATATGGAAATCGA+TGG | + | chr3.4:2911856-2911875 | MS.gene51514:CDS | 40.0% | |
| ATTTGTAACGCGAGTGTCTA+GGG | + | chr3.4:2913387-2913406 | MS.gene51514:intron | 40.0% | |
| CAAGAGGAACAATTCTGTGA+GGG | + | chr3.4:2911129-2911148 | MS.gene51514:CDS | 40.0% | |
| CACTGGAATTATCAAAGGCT+TGG | + | chr3.4:2914742-2914761 | MS.gene51514:CDS | 40.0% | |
| CAGGATCAAAAAATCCTGTG+AGG | + | chr3.4:2911173-2911192 | MS.gene51514:CDS | 40.0% | |
| CAGTTCTCACTTTCATTCCA+AGG | + | chr3.4:2911350-2911369 | MS.gene51514:CDS | 40.0% | |
| CGATTAACTGATATTCCTCG+TGG | + | chr3.4:2912756-2912775 | MS.gene51514:intron | 40.0% | |
| CTTCCAAATACTGCAAGTTG+TGG | - | chr3.4:2911445-2911464 | None:intergenic | 40.0% | |
| CTTCCACAACTTGCAGTATT+TGG | + | chr3.4:2911439-2911458 | MS.gene51514:CDS | 40.0% | |
| GCACTACCAACTATCATTGT+TGG | + | chr3.4:2915327-2915346 | MS.gene51514:CDS | 40.0% | |
| GCACTTCAGAGTTTGAAGAA+TGG | + | chr3.4:2913744-2913763 | MS.gene51514:CDS | 40.0% | |
| GGGTATTTATAGCCTTTCGT+GGG | - | chr3.4:2915071-2915090 | None:intergenic | 40.0% | |
| GTCAAGCTGTTAGATTACCA+AGG | + | chr3.4:2913153-2913172 | MS.gene51514:CDS | 40.0% | |
| GTCTCAAAGATGCTCTTGAA+AGG | + | chr3.4:2914065-2914084 | MS.gene51514:CDS | 40.0% | |
| GTTGGTATAAGTGGACAAGA+GGG | + | chr3.4:2914643-2914662 | MS.gene51514:CDS | 40.0% | |
| TAAACTTCAACAAGGTGTGC+CGG | + | chr3.4:2913883-2913902 | MS.gene51514:CDS | 40.0% | |
| TAAGTACTATGGATGGGGAT+TGG | + | chr3.4:2912197-2912216 | MS.gene51514:CDS | 40.0% | |
| TCAACCAACATTGTGCTTAG+AGG | + | chr3.4:2911898-2911917 | MS.gene51514:CDS | 40.0% | |
| TCAGGTGTGTCAACAACAAT+AGG | - | chr3.4:2913126-2913145 | None:intergenic | 40.0% | |
| TGATACTTTGTGGCAAAGCA+TGG | + | chr3.4:2915461-2915480 | MS.gene51514:CDS | 40.0% | |
| TGCCTTGAGAATGATCTCAA+GGG | - | chr3.4:2915093-2915112 | None:intergenic | 40.0% | |
| TGGCTATGGATGTTGTTAGA+TGG | + | chr3.4:2915589-2915608 | MS.gene51514:CDS | 40.0% | |
| TGTCCAGCACTATAAAGTTG+AGG | - | chr3.4:2915396-2915415 | None:intergenic | 40.0% | |
| TTCCAATATGCAAAGAGTGG+AGG | - | chr3.4:2915498-2915517 | None:intergenic | 40.0% | |
| TTGTTTCCCTTGTGAAGAAG+CGG | + | chr3.4:2914418-2914437 | MS.gene51514:CDS | 40.0% | |
| TTTCAATGTGCAAGCATACG+AGG | + | chr3.4:2912465-2912484 | MS.gene51514:CDS | 40.0% | |
| TTTCTCATTATGACCACTGC+AGG | + | chr3.4:2913492-2913511 | MS.gene51514:intron | 40.0% | |
| ! | AGCAACACGGTAACATTTTC+CGG | + | chr3.4:2911016-2911035 | MS.gene51514:CDS | 40.0% |
| ! | AGTTGGTATAAGTGGACAAG+AGG | + | chr3.4:2914642-2914661 | MS.gene51514:CDS | 40.0% |
| ! | ATTCTATGGGTTCTAGCAAG+AGG | + | chr3.4:2911113-2911132 | MS.gene51514:CDS | 40.0% |
| ! | GGCAAAGCATGGTTGTATTT+TGG | + | chr3.4:2915472-2915491 | MS.gene51514:CDS | 40.0% |
| ! | TCTAGCCTACTTCTTTTCGA+TGG | - | chr3.4:2912012-2912031 | None:intergenic | 40.0% |
| ! | TGGTGTGAAAGATGCTTTTG+AGG | + | chr3.4:2911507-2911526 | MS.gene51514:CDS | 40.0% |
| ! | TTTGGTAGCTCAGGAAAAAC+TGG | - | chr3.4:2910980-2910999 | None:intergenic | 40.0% |
| !! | AAGATGCTTTTGAGGATTGG+AGG | + | chr3.4:2911515-2911534 | MS.gene51514:CDS | 40.0% |
| !! | GACTCTTGCTGTGGTTATTT+TGG | + | chr3.4:2915554-2915573 | MS.gene51514:CDS | 40.0% |
| !! | GACTTTGATTTTGGTAGCTC+AGG | - | chr3.4:2910989-2911008 | None:intergenic | 40.0% |
| !! | GATGTTGGAGTTGGTATAAG+TGG | + | chr3.4:2914634-2914653 | MS.gene51514:CDS | 40.0% |
| !! | TTCAAGTACTGGACTGTTCT+GGG | + | chr3.4:2916345-2916364 | MS.gene51514:CDS | 40.0% |
| !! | TTTCAAGTACTGGACTGTTC+TGG | + | chr3.4:2916344-2916363 | MS.gene51514:CDS | 40.0% |
| !!! | ATTCTCCATGCTGGTTTTTG+TGG | - | chr3.4:2912505-2912524 | None:intergenic | 40.0% |
| AAGAATACTAGTTGGGCGCT+TGG | + | chr3.4:2911931-2911950 | MS.gene51514:CDS | 45.0% | |
| AAGGTTCAACCGAGGTATAC+TGG | + | chr3.4:2911790-2911809 | MS.gene51514:CDS | 45.0% | |
| AATCACGTCTGTTTGTGCTG+CGG | + | chr3.4:2912089-2912108 | MS.gene51514:CDS | 45.0% | |
| ACCAGCATGGAGAATGAACT+AGG | + | chr3.4:2912510-2912529 | MS.gene51514:CDS | 45.0% | |
| ACCTAGTTCATTCTCCATGC+TGG | - | chr3.4:2912514-2912533 | None:intergenic | 45.0% | |
| AGATGTCCGCTTCTTCACAA+GGG | - | chr3.4:2914427-2914446 | None:intergenic | 45.0% | |
| AGGTATGGTTCAAAAGGTGG+TGG | + | chr3.4:2911193-2911212 | MS.gene51514:CDS | 45.0% | |
| ATGCTTATTGAGCGAACCTC+CGG | + | chr3.4:2913228-2913247 | MS.gene51514:CDS | 45.0% | |
| CAAATGGCTGATGTTGGAGT+TGG | + | chr3.4:2914625-2914644 | MS.gene51514:CDS | 45.0% | |
| CACTGCAGGTTCAATGTCTT+GGG | + | chr3.4:2913506-2913525 | MS.gene51514:intron | 45.0% | |
| CACTGTCGAGAATGTGTACA+AGG | - | chr3.4:2914147-2914166 | None:intergenic | 45.0% | |
| CAGTTCCACAAAAACCAGCA+TGG | + | chr3.4:2912497-2912516 | MS.gene51514:CDS | 45.0% | |
| CATAAAACCATAGGCAGCAG+CGG | - | chr3.4:2913211-2913230 | None:intergenic | 45.0% | |
| CCTGTGAGGTATGGTTCAAA+AGG | + | chr3.4:2911187-2911206 | MS.gene51514:CDS | 45.0% | |
| CCTTGAGAATGATCTCAAGG+GGG | - | chr3.4:2915091-2915110 | None:intergenic | 45.0% | |
| CTAGGTGAATACTCAGTGCA+AGG | + | chr3.4:2912528-2912547 | MS.gene51514:CDS | 45.0% | |
| CTCTAAACATGACTGCTTGG+GGG | + | chr3.4:2915025-2915044 | MS.gene51514:intron | 45.0% | |
| CTTCACTCTTACTCTTCCCT+AGG | + | chr3.4:2913686-2913705 | MS.gene51514:CDS | 45.0% | |
| CTTCGATCATGAAATAGGCC+TGG | - | chr3.4:2912314-2912333 | None:intergenic | 45.0% | |
| CTTGCCAATTGCAAAAGCTC+TGG | - | chr3.4:2913027-2913046 | None:intergenic | 45.0% | |
| GAAACAGGAGACAGGTTCAA+AGG | + | chr3.4:2911771-2911790 | MS.gene51514:CDS | 45.0% | |
| GAAGACTAGGTATGCGAAAC+AGG | + | chr3.4:2911756-2911775 | MS.gene51514:CDS | 45.0% | |
| GAGCAGCAGGGATTAAAGTT+TGG | + | chr3.4:2913924-2913943 | MS.gene51514:CDS | 45.0% | |
| GAGCTCCATCGAAAAGAAGT+AGG | + | chr3.4:2912004-2912023 | MS.gene51514:CDS | 45.0% | |
| GATGCTATACCTCAACTTCC+TGG | + | chr3.4:2915678-2915697 | MS.gene51514:CDS | 45.0% | |
| GCAAGAGGAACAATTCTGTG+AGG | + | chr3.4:2911128-2911147 | MS.gene51514:CDS | 45.0% | |
| GCCTTGAGAATGATCTCAAG+GGG | - | chr3.4:2915092-2915111 | None:intergenic | 45.0% | |
| GTATAAGTGGACAAGAGGGT+AGG | + | chr3.4:2914647-2914666 | MS.gene51514:CDS | 45.0% | |
| GTGAATACATACCAGTAGCC+AGG | - | chr3.4:2915699-2915718 | None:intergenic | 45.0% | |
| GTGAGGTATGGTTCAAAAGG+TGG | + | chr3.4:2911190-2911209 | MS.gene51514:CDS | 45.0% | |
| TAACCACAGCAAGAGTCCAA+AGG | - | chr3.4:2915551-2915570 | None:intergenic | 45.0% | |
| TAGCAAGCATAGGAGACCTT+TGG | + | chr3.4:2915532-2915551 | MS.gene51514:CDS | 45.0% | |
| TCTGACATGACACTAGCCAT+CGG | + | chr3.4:2914444-2914463 | MS.gene51514:CDS | 45.0% | |
| ! | AAAGGTGGTGGTGATTCTGA+AGG | + | chr3.4:2911205-2911224 | MS.gene51514:CDS | 45.0% |
| ! | AAGGTGGTGGTGATTCTGAA+GGG | + | chr3.4:2911206-2911225 | MS.gene51514:CDS | 45.0% |
| ! | ACGCTCTAAACATGACTGCT+TGG | + | chr3.4:2915022-2915041 | MS.gene51514:intron | 45.0% |
| ! | CAGTCATGTTTAGAGCGTCT+AGG | - | chr3.4:2915020-2915039 | None:intergenic | 45.0% |
| ! | CCTTTTGAACCATACCTCAC+AGG | - | chr3.4:2911190-2911209 | None:intergenic | 45.0% |
| ! | CGCTCTAAACATGACTGCTT+GGG | + | chr3.4:2915023-2915042 | MS.gene51514:intron | 45.0% |
| ! | GCTCTAAACATGACTGCTTG+GGG | + | chr3.4:2915024-2915043 | MS.gene51514:intron | 45.0% |
| ! | GGGGTATTTATAGCCTTTCG+TGG | - | chr3.4:2915072-2915091 | None:intergenic | 45.0% |
| ! | GGTGACTCATGCTGTCATTT+GGG | + | chr3.4:2915617-2915636 | MS.gene51514:CDS | 45.0% |
| ! | GTGACTCATGCTGTCATTTG+GGG | + | chr3.4:2915618-2915637 | MS.gene51514:CDS | 45.0% |
| ! | TCTATGGAGCTTGTTCGTGT+TGG | + | chr3.4:2912288-2912307 | MS.gene51514:CDS | 45.0% |
| ! | TGTCGTTCTTTGTTGTCGAG+TGG | + | chr3.4:2914374-2914393 | MS.gene51514:CDS | 45.0% |
| !! | TGAGCATAGCTTTAGTCTCG+CGG | - | chr3.4:2911975-2911994 | None:intergenic | 45.0% |
| AACAGCTTGACATCGGGATC+AGG | - | chr3.4:2913144-2913163 | None:intergenic | 50.0% | |
| AGAACTCGTACCATCTCCGA+TGG | - | chr3.4:2914463-2914482 | None:intergenic | 50.0% | |
| AGACCTTTGGACTCTTGCTG+TGG | + | chr3.4:2915545-2915564 | MS.gene51514:CDS | 50.0% | |
| AGAGGGTAGGCAAGCTGTAA+TGG | + | chr3.4:2914660-2914679 | MS.gene51514:CDS | 50.0% | |
| AGGTATGCGAAACAGGAGAC+AGG | + | chr3.4:2911763-2911782 | MS.gene51514:CDS | 50.0% | |
| ATCAATGACTATGTGGCCGG+AGG | - | chr3.4:2913247-2913266 | None:intergenic | 50.0% | |
| ATCGCCTGATGAACAAGCGT+TGG | + | chr3.4:2913179-2913198 | MS.gene51514:CDS | 50.0% | |
| ATGACACTAGCCATCGGAGA+TGG | + | chr3.4:2914450-2914469 | MS.gene51514:CDS | 50.0% | |
| CACAGCATTGCTTCCACGTT+TGG | + | chr3.4:2916390-2916409 | MS.gene51514:CDS | 50.0% | |
| CAGATGTCCGCTTCTTCACA+AGG | - | chr3.4:2914428-2914447 | None:intergenic | 50.0% | |
| CAGGTTCAAAGGTTCAACCG+AGG | + | chr3.4:2911782-2911801 | MS.gene51514:CDS | 50.0% | |
| CCAAGACATTGAACCTGCAG+TGG | - | chr3.4:2913508-2913527 | None:intergenic | 50.0% | |
| CCACTGCAGGTTCAATGTCT+TGG | + | chr3.4:2913505-2913524 | MS.gene51514:intron | 50.0% | |
| CCCCCTTGAGATCATTCTCA+AGG | + | chr3.4:2915088-2915107 | MS.gene51514:intron | 50.0% | |
| CGACAGTGAACACGAAGAAG+AGG | + | chr3.4:2914159-2914178 | MS.gene51514:CDS | 50.0% | |
| CGGAAAAACAAGCCCACGAA+AGG | + | chr3.4:2915056-2915075 | MS.gene51514:intron | 50.0% | |
| CTCAGCGACTCAATTGCTTC+CGG | - | chr3.4:2913905-2913924 | None:intergenic | 50.0% | |
| GGCCCTGCAATGTCAAAGTT+AGG | - | chr3.4:2916314-2916333 | None:intergenic | 50.0% | |
| GGCCTCCACTCTTTGCATAT+TGG | + | chr3.4:2915493-2915512 | MS.gene51514:CDS | 50.0% | |
| GGGTGACTCATGCTGTCATT+TGG | + | chr3.4:2915616-2915635 | MS.gene51514:CDS | 50.0% | |
| GTTCATCAGGCGATTCACCT+TGG | - | chr3.4:2913173-2913192 | None:intergenic | 50.0% | |
| TACCAGTAGCCAGGAAGTTG+AGG | - | chr3.4:2915690-2915709 | None:intergenic | 50.0% | |
| TACCTCAACTTCCTGGCTAC+TGG | + | chr3.4:2915685-2915704 | MS.gene51514:CDS | 50.0% | |
| TACGCCAACGCTTGTTCATC+AGG | - | chr3.4:2913186-2913205 | None:intergenic | 50.0% | |
| TGCACATATGCAACACCGGT+TGG | - | chr3.4:2911706-2911725 | None:intergenic | 50.0% | |
| ! | AAGCACTGCGGTATTTGGTC+GGG | + | chr3.4:2913787-2913806 | MS.gene51514:CDS | 50.0% |
| ! | ACAATGCCAGCCTTTTGCAG+TGG | - | chr3.4:2914402-2914421 | None:intergenic | 50.0% |
| ! | CAAGCACTGCGGTATTTGGT+CGG | + | chr3.4:2913786-2913805 | MS.gene51514:CDS | 50.0% |
| ! | CTATGAAGCAGCAAGCACTG+CGG | + | chr3.4:2913775-2913794 | MS.gene51514:CDS | 50.0% |
| ! | CTGTTCTGGGCATTGTTGCT+AGG | + | chr3.4:2916358-2916377 | MS.gene51514:CDS | 50.0% |
| ! | GGTTTGGTTGAAGCGCCATA+AGG | + | chr3.4:2912110-2912129 | MS.gene51514:CDS | 50.0% |
| ! | GTGCTTCTAGAAGCCTTCTG+AGG | - | chr3.4:2914998-2915017 | None:intergenic | 50.0% |
| ACTGCTTGGGGGCTAAGTCA+CGG | + | chr3.4:2915036-2915055 | MS.gene51514:intron | 55.0% | |
| ATTGAGTCGCTGAGAGCAGC+AGG | + | chr3.4:2913911-2913930 | MS.gene51514:CDS | 55.0% | |
| CGTCTGTTTGTGCTGCGGTT+TGG | + | chr3.4:2912094-2912113 | MS.gene51514:CDS | 55.0% | |
| TCGAGTGGCTCCACTGCAAA+AGG | + | chr3.4:2914389-2914408 | MS.gene51514:CDS | 55.0% | |
| TTGAGTCGCTGAGAGCAGCA+GGG | + | chr3.4:2913912-2913931 | MS.gene51514:CDS | 55.0% | |
| ! | CGCAGTGCTTGCTGCTTCAT+AGG | - | chr3.4:2913777-2913796 | None:intergenic | 55.0% |
| ! | GCAGCAAGCACTGCGGTATT+TGG | + | chr3.4:2913782-2913801 | MS.gene51514:CDS | 55.0% |
| !! | CTTGGTGTCGCGGTCTATTG+TGG | + | chr3.4:2911949-2911968 | MS.gene51514:CDS | 55.0% |
| GTGGCTCCACTGCAAAAGGC+TGG | + | chr3.4:2914393-2914412 | MS.gene51514:CDS | 60.0% | |
| ! | GGAGCTTGTTCGTGTTGGCC+AGG | + | chr3.4:2912293-2912312 | MS.gene51514:CDS | 60.0% |
| !! | TAGTTGGGCGCTTGGTGTCG+CGG | + | chr3.4:2911939-2911958 | MS.gene51514:CDS | 60.0% |
| GCCCTCCAGAAGGGCCCAAA+CGG | + | chr3.4:2914958-2914977 | MS.gene51514:intron | 65.0% | |
| GCCGTTTGGGCCCTTCTGGA+GGG | - | chr3.4:2914962-2914981 | None:intergenic | 65.0% | |
| GCGTATGCCGCTGCTGCCTA+TGG | + | chr3.4:2913201-2913220 | MS.gene51514:CDS | 65.0% | |
| ! | GTTTGGGCCCTTCTGGAGGG+CGG | - | chr3.4:2914959-2914978 | None:intergenic | 65.0% |
| !! | CTTCTGAGGCGCGTCCTCCA+GGG | - | chr3.4:2914984-2915003 | None:intergenic | 65.0% |
| AAGGGCCCAAACGGCCCTGG+AGG | + | chr3.4:2914967-2914986 | MS.gene51514:intron | 70.0% | |
| AGGGCACACCGCCCTCCAGA+AGG | + | chr3.4:2914948-2914967 | MS.gene51514:intron | 70.0% | |
| CAGAAGGGCCCAAACGGCCC+TGG | + | chr3.4:2914964-2914983 | MS.gene51514:intron | 70.0% | |
| CAGGGCCGTTTGGGCCCTTC+TGG | - | chr3.4:2914966-2914985 | None:intergenic | 70.0% | |
| CCTGGAGGACGCGCCTCAGA+AGG | + | chr3.4:2914982-2915001 | MS.gene51514:intron | 70.0% | |
| CGCGTCCTCCAGGGCCGTTT+GGG | - | chr3.4:2914975-2914994 | None:intergenic | 70.0% | |
| GGCCGTTTGGGCCCTTCTGG+AGG | - | chr3.4:2914963-2914982 | None:intergenic | 70.0% | |
| GGGCACACCGCCCTCCAGAA+GGG | + | chr3.4:2914949-2914968 | MS.gene51514:intron | 70.0% | |
| !! | CCTTCTGAGGCGCGTCCTCC+AGG | - | chr3.4:2914985-2915004 | None:intergenic | 70.0% |
| GCGCGTCCTCCAGGGCCGTT+TGG | - | chr3.4:2914976-2914995 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 2910908 | 2916552 | 2910908 | ID=MS.gene51514 |
| chr3.4 | mRNA | 2910908 | 2916552 | 2910908 | ID=MS.gene51514.t1;Parent=MS.gene51514 |
| chr3.4 | exon | 2910908 | 2912549 | 2910908 | ID=MS.gene51514.t1.exon1;Parent=MS.gene51514.t1 |
| chr3.4 | CDS | 2910908 | 2912549 | 2910908 | ID=cds.MS.gene51514.t1;Parent=MS.gene51514.t1 |
| chr3.4 | exon | 2912980 | 2913286 | 2912980 | ID=MS.gene51514.t1.exon2;Parent=MS.gene51514.t1 |
| chr3.4 | CDS | 2912980 | 2913286 | 2912980 | ID=cds.MS.gene51514.t1;Parent=MS.gene51514.t1 |
| chr3.4 | exon | 2913514 | 2914180 | 2913514 | ID=MS.gene51514.t1.exon3;Parent=MS.gene51514.t1 |
| chr3.4 | CDS | 2913514 | 2914180 | 2913514 | ID=cds.MS.gene51514.t1;Parent=MS.gene51514.t1 |
| chr3.4 | exon | 2914348 | 2914471 | 2914348 | ID=MS.gene51514.t1.exon4;Parent=MS.gene51514.t1 |
| chr3.4 | CDS | 2914348 | 2914471 | 2914348 | ID=cds.MS.gene51514.t1;Parent=MS.gene51514.t1 |
| chr3.4 | exon | 2914602 | 2914821 | 2914602 | ID=MS.gene51514.t1.exon5;Parent=MS.gene51514.t1 |
| chr3.4 | CDS | 2914602 | 2914821 | 2914602 | ID=cds.MS.gene51514.t1;Parent=MS.gene51514.t1 |
| chr3.4 | exon | 2915248 | 2915706 | 2915248 | ID=MS.gene51514.t1.exon6;Parent=MS.gene51514.t1 |
| chr3.4 | CDS | 2915248 | 2915706 | 2915248 | ID=cds.MS.gene51514.t1;Parent=MS.gene51514.t1 |
| chr3.4 | exon | 2916330 | 2916552 | 2916330 | ID=MS.gene51514.t1.exon7;Parent=MS.gene51514.t1 |
| chr3.4 | CDS | 2916330 | 2916552 | 2916330 | ID=cds.MS.gene51514.t1;Parent=MS.gene51514.t1 |
| Gene Sequence |
| Protein sequence |
