Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21577.t1 | RHN81220.1 | 93.9 | 229 | 14 | 0 | 1 | 229 | 20 | 248 | 2.70E-122 | 448 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21577.t1 | Q03664 | 44.8 | 223 | 117 | 4 | 7 | 228 | 1 | 218 | 4.4e-49 | 196.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21577.t1 | G7I2Y3 | 93.9 | 229 | 14 | 0 | 1 | 229 | 1 | 229 | 1.9e-122 | 448.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049259 | MS.gene21577 | 0.840649 | 7.66E-58 | -1.69E-46 |
| MS.gene049281 | MS.gene21577 | 0.843552 | 1.31E-58 | -1.69E-46 |
| MS.gene049312 | MS.gene21577 | 0.809466 | 1.87E-50 | -1.69E-46 |
| MS.gene049320 | MS.gene21577 | -0.817578 | 3.07E-52 | -1.69E-46 |
| MS.gene049483 | MS.gene21577 | 0.804141 | 2.49E-49 | -1.69E-46 |
| MS.gene049611 | MS.gene21577 | 0.841294 | 5.19E-58 | -1.69E-46 |
| MS.gene049634 | MS.gene21577 | 0.826026 | 3.40E-54 | -1.69E-46 |
| MS.gene049710 | MS.gene21577 | 0.833622 | 4.80E-56 | -1.69E-46 |
| MS.gene050082 | MS.gene21577 | 0.801846 | 7.42E-49 | -1.69E-46 |
| MS.gene050129 | MS.gene21577 | 0.804241 | 2.37E-49 | -1.69E-46 |
| MS.gene05015 | MS.gene21577 | 0.811173 | 7.99E-51 | -1.69E-46 |
| MS.gene050216 | MS.gene21577 | -0.818704 | 1.71E-52 | -1.69E-46 |
| MS.gene050380 | MS.gene21577 | 0.836835 | 7.42E-57 | -1.69E-46 |
| MS.gene050381 | MS.gene21577 | 0.886526 | 3.17E-72 | -1.69E-46 |
| MS.gene050496 | MS.gene21577 | -0.81767 | 2.92E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene21577 | -0.821264 | 4.43E-53 | -1.69E-46 |
| MS.gene050612 | MS.gene21577 | -0.817861 | 2.65E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene21577 | -0.824704 | 6.99E-54 | -1.69E-46 |
| MS.gene050871 | MS.gene21577 | -0.824689 | 7.05E-54 | -1.69E-46 |
| MS.gene050883 | MS.gene21577 | 0.891282 | 4.58E-74 | -1.69E-46 |
| MS.gene051044 | MS.gene21577 | 0.858551 | 7.62E-63 | -1.69E-46 |
| MS.gene05104 | MS.gene21577 | 0.852141 | 5.61E-61 | -1.69E-46 |
| MS.gene051127 | MS.gene21577 | 0.877239 | 7.37E-69 | -1.69E-46 |
| MS.gene051138 | MS.gene21577 | 0.845451 | 4.03E-59 | -1.69E-46 |
| MS.gene051364 | MS.gene21577 | 0.862886 | 3.69E-64 | -1.69E-46 |
| MS.gene051366 | MS.gene21577 | 0.847774 | 9.35E-60 | -1.69E-46 |
| MS.gene051367 | MS.gene21577 | 0.833917 | 4.05E-56 | -1.69E-46 |
| MS.gene05141 | MS.gene21577 | 0.808002 | 3.84E-50 | -1.69E-46 |
| MS.gene051422 | MS.gene21577 | 0.816821 | 4.54E-52 | -1.69E-46 |
| MS.gene051632 | MS.gene21577 | 0.806413 | 8.33E-50 | -1.69E-46 |
| MS.gene051863 | MS.gene21577 | 0.816524 | 5.29E-52 | -1.69E-46 |
| MS.gene051946 | MS.gene21577 | 0.84982 | 2.53E-60 | -1.69E-46 |
| MS.gene052089 | MS.gene21577 | 0.803484 | 3.41E-49 | -1.69E-46 |
| MS.gene052211 | MS.gene21577 | 0.820227 | 7.67E-53 | -1.69E-46 |
| MS.gene052329 | MS.gene21577 | 0.814008 | 1.92E-51 | -1.69E-46 |
| MS.gene05234 | MS.gene21577 | 0.801703 | 7.95E-49 | -1.69E-46 |
| MS.gene053069 | MS.gene21577 | 0.812699 | 3.72E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene21577 | -0.807538 | 4.81E-50 | -1.69E-46 |
| MS.gene053420 | MS.gene21577 | 0.870731 | 1.17E-66 | -1.69E-46 |
| MS.gene053488 | MS.gene21577 | 0.85864 | 7.17E-63 | -1.69E-46 |
| MS.gene053549 | MS.gene21577 | 0.81467 | 1.37E-51 | -1.69E-46 |
| MS.gene053561 | MS.gene21577 | 0.876571 | 1.26E-68 | -1.69E-46 |
| MS.gene053826 | MS.gene21577 | 0.845755 | 3.33E-59 | -1.69E-46 |
| MS.gene053887 | MS.gene21577 | 0.816448 | 5.50E-52 | -1.69E-46 |
| MS.gene054003 | MS.gene21577 | -0.80367 | 3.12E-49 | -1.69E-46 |
| MS.gene054054 | MS.gene21577 | 0.824839 | 6.49E-54 | -1.69E-46 |
| MS.gene054056 | MS.gene21577 | 0.858117 | 1.03E-62 | -1.69E-46 |
| MS.gene054706 | MS.gene21577 | 0.827219 | 1.77E-54 | -1.69E-46 |
| MS.gene054707 | MS.gene21577 | 0.840153 | 1.03E-57 | -1.69E-46 |
| MS.gene054708 | MS.gene21577 | 0.8649 | 8.71E-65 | -1.69E-46 |
| MS.gene054959 | MS.gene21577 | 0.80559 | 1.24E-49 | -1.69E-46 |
| MS.gene055124 | MS.gene21577 | 0.891284 | 4.57E-74 | -1.69E-46 |
| MS.gene055139 | MS.gene21577 | 0.826878 | 2.13E-54 | -1.69E-46 |
| MS.gene055154 | MS.gene21577 | 0.894534 | 2.25E-75 | -1.69E-46 |
| MS.gene055202 | MS.gene21577 | 0.862577 | 4.59E-64 | -1.69E-46 |
| MS.gene055362 | MS.gene21577 | -0.810123 | 1.35E-50 | -1.69E-46 |
| MS.gene055502 | MS.gene21577 | -0.822163 | 2.74E-53 | -1.69E-46 |
| MS.gene055549 | MS.gene21577 | 0.814401 | 1.57E-51 | -1.69E-46 |
| MS.gene055550 | MS.gene21577 | 0.820505 | 6.62E-53 | -1.69E-46 |
| MS.gene055577 | MS.gene21577 | -0.812591 | 3.93E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene21577 | -0.809864 | 1.53E-50 | -1.69E-46 |
| MS.gene055942 | MS.gene21577 | 0.844078 | 9.45E-59 | -1.69E-46 |
| MS.gene056224 | MS.gene21577 | 0.835702 | 1.44E-56 | -1.69E-46 |
| MS.gene056310 | MS.gene21577 | 0.859029 | 5.48E-63 | -1.69E-46 |
| MS.gene056311 | MS.gene21577 | 0.875399 | 3.18E-68 | -1.69E-46 |
| MS.gene056313 | MS.gene21577 | 0.853051 | 3.09E-61 | -1.69E-46 |
| MS.gene056504 | MS.gene21577 | -0.825909 | 3.63E-54 | -1.69E-46 |
| MS.gene056761 | MS.gene21577 | 0.813893 | 2.03E-51 | -1.69E-46 |
| MS.gene056856 | MS.gene21577 | 0.821428 | 4.06E-53 | -1.69E-46 |
| MS.gene057014 | MS.gene21577 | 0.847544 | 1.08E-59 | -1.69E-46 |
| MS.gene057261 | MS.gene21577 | 0.809422 | 1.91E-50 | -1.69E-46 |
| MS.gene057473 | MS.gene21577 | 0.811142 | 8.11E-51 | -1.69E-46 |
| MS.gene057499 | MS.gene21577 | 0.804373 | 2.23E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene21577 | 0.806234 | 9.08E-50 | -1.69E-46 |
| MS.gene057549 | MS.gene21577 | 0.839857 | 1.23E-57 | -1.69E-46 |
| MS.gene058068 | MS.gene21577 | 0.850588 | 1.54E-60 | -1.69E-46 |
| MS.gene058093 | MS.gene21577 | 0.863107 | 3.15E-64 | -1.69E-46 |
| MS.gene058099 | MS.gene21577 | 0.889411 | 2.48E-73 | -1.69E-46 |
| MS.gene058108 | MS.gene21577 | 0.82778 | 1.30E-54 | -1.69E-46 |
| MS.gene058109 | MS.gene21577 | 0.875364 | 3.27E-68 | -1.69E-46 |
| MS.gene058111 | MS.gene21577 | 0.859907 | 2.99E-63 | -1.69E-46 |
| MS.gene058117 | MS.gene21577 | 0.82002 | 8.55E-53 | -1.69E-46 |
| MS.gene058157 | MS.gene21577 | -0.822409 | 2.41E-53 | -1.69E-46 |
| MS.gene058171 | MS.gene21577 | 0.883736 | 3.49E-71 | -1.69E-46 |
| MS.gene058173 | MS.gene21577 | 0.879852 | 8.89E-70 | -1.69E-46 |
| MS.gene058175 | MS.gene21577 | 0.884006 | 2.77E-71 | -1.69E-46 |
| MS.gene058179 | MS.gene21577 | 0.819965 | 8.80E-53 | -1.69E-46 |
| MS.gene058180 | MS.gene21577 | 0.800188 | 1.62E-48 | -1.69E-46 |
| MS.gene058268 | MS.gene21577 | 0.842346 | 2.74E-58 | -1.69E-46 |
| MS.gene058269 | MS.gene21577 | 0.842 | 3.38E-58 | -1.69E-46 |
| MS.gene058334 | MS.gene21577 | 0.805859 | 1.09E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene21577 | -0.817155 | 3.82E-52 | -1.69E-46 |
| MS.gene058493 | MS.gene21577 | 0.874827 | 4.98E-68 | -1.69E-46 |
| MS.gene058494 | MS.gene21577 | 0.845711 | 3.43E-59 | -1.69E-46 |
| MS.gene058496 | MS.gene21577 | 0.829431 | 5.17E-55 | -1.69E-46 |
| MS.gene058603 | MS.gene21577 | 0.81127 | 7.61E-51 | -1.69E-46 |
| MS.gene058628 | MS.gene21577 | 0.851799 | 7.01E-61 | -1.69E-46 |
| MS.gene058629 | MS.gene21577 | 0.841111 | 5.79E-58 | -1.69E-46 |
| MS.gene058630 | MS.gene21577 | 0.855687 | 5.34E-62 | -1.69E-46 |
| MS.gene058840 | MS.gene21577 | 0.825244 | 5.21E-54 | -1.69E-46 |
| MS.gene059022 | MS.gene21577 | -0.82174 | 3.44E-53 | -1.69E-46 |
| MS.gene059037 | MS.gene21577 | 0.841146 | 5.67E-58 | -1.69E-46 |
| MS.gene059038 | MS.gene21577 | 0.819091 | 1.39E-52 | -1.69E-46 |
| MS.gene059045 | MS.gene21577 | 0.871821 | 5.10E-67 | -1.69E-46 |
| MS.gene059223 | MS.gene21577 | 0.831938 | 1.26E-55 | -1.69E-46 |
| MS.gene059690 | MS.gene21577 | 0.832005 | 1.21E-55 | -1.69E-46 |
| MS.gene059691 | MS.gene21577 | 0.837585 | 4.76E-57 | -1.69E-46 |
| MS.gene059694 | MS.gene21577 | 0.849428 | 3.25E-60 | -1.69E-46 |
| MS.gene059697 | MS.gene21577 | 0.861765 | 8.15E-64 | -1.69E-46 |
| MS.gene059703 | MS.gene21577 | 0.815709 | 8.05E-52 | -1.69E-46 |
| MS.gene059865 | MS.gene21577 | -0.8309 | 2.26E-55 | -1.69E-46 |
| MS.gene059916 | MS.gene21577 | 0.824938 | 6.15E-54 | -1.69E-46 |
| MS.gene060205 | MS.gene21577 | 0.803591 | 3.24E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene21577 | -0.816043 | 6.78E-52 | -1.69E-46 |
| MS.gene060593 | MS.gene21577 | 0.806153 | 9.44E-50 | -1.69E-46 |
| MS.gene060595 | MS.gene21577 | 0.847748 | 9.50E-60 | -1.69E-46 |
| MS.gene060778 | MS.gene21577 | -0.811338 | 7.36E-51 | -1.69E-46 |
| MS.gene06077 | MS.gene21577 | -0.823221 | 1.56E-53 | -1.69E-46 |
| MS.gene060982 | MS.gene21577 | -0.802131 | 6.49E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21577.t1 | MTR_1g090070 | 93.886 | 229 | 14 | 0 | 1 | 229 | 1 | 229 | 2.79e-161 | 445 |
| MS.gene21577.t1 | MTR_1g090060 | 79.638 | 221 | 44 | 1 | 7 | 227 | 1 | 220 | 5.38e-133 | 373 |
| MS.gene21577.t1 | MTR_1g090100 | 78.539 | 219 | 46 | 1 | 10 | 228 | 3 | 220 | 4.17e-127 | 358 |
| MS.gene21577.t1 | MTR_1g090090 | 76.018 | 221 | 52 | 1 | 7 | 227 | 1 | 220 | 1.84e-122 | 347 |
| MS.gene21577.t1 | MTR_4g059730 | 62.963 | 216 | 79 | 1 | 9 | 224 | 4 | 218 | 6.23e-101 | 292 |
| MS.gene21577.t1 | MTR_1g090150 | 45.540 | 213 | 114 | 1 | 7 | 219 | 1 | 211 | 3.62e-62 | 194 |
| MS.gene21577.t1 | MTR_1g115195 | 43.458 | 214 | 119 | 2 | 7 | 219 | 1 | 213 | 3.33e-60 | 189 |
| MS.gene21577.t1 | MTR_3g099757 | 42.478 | 226 | 123 | 4 | 7 | 229 | 1 | 222 | 2.48e-57 | 181 |
| MS.gene21577.t1 | MTR_5g040430 | 40.090 | 222 | 126 | 4 | 6 | 222 | 4 | 223 | 8.90e-56 | 177 |
| MS.gene21577.t1 | MTR_7g065660 | 41.176 | 221 | 125 | 3 | 10 | 229 | 8 | 224 | 1.69e-55 | 177 |
| MS.gene21577.t1 | MTR_4g019780 | 42.453 | 212 | 117 | 3 | 9 | 219 | 8 | 215 | 8.43e-55 | 175 |
| MS.gene21577.t1 | MTR_4g019790 | 40.807 | 223 | 127 | 3 | 8 | 229 | 6 | 224 | 2.19e-54 | 174 |
| MS.gene21577.t1 | MTR_7g065740 | 39.381 | 226 | 125 | 3 | 9 | 229 | 7 | 225 | 4.66e-54 | 173 |
| MS.gene21577.t1 | MTR_6g080440 | 41.232 | 211 | 121 | 2 | 7 | 217 | 1 | 208 | 8.63e-54 | 172 |
| MS.gene21577.t1 | MTR_7g065630 | 41.176 | 221 | 123 | 2 | 9 | 229 | 25 | 238 | 1.17e-53 | 172 |
| MS.gene21577.t1 | MTR_7g065720 | 40.991 | 222 | 125 | 3 | 9 | 228 | 7 | 224 | 4.51e-53 | 171 |
| MS.gene21577.t1 | MTR_7g065230 | 41.818 | 220 | 120 | 3 | 9 | 228 | 7 | 218 | 6.35e-53 | 170 |
| MS.gene21577.t1 | MTR_7g065590 | 39.648 | 227 | 128 | 4 | 5 | 228 | 3 | 223 | 7.83e-52 | 167 |
| MS.gene21577.t1 | MTR_7g065710 | 43.810 | 210 | 111 | 3 | 10 | 219 | 5 | 207 | 3.99e-51 | 166 |
| MS.gene21577.t1 | MTR_7g065600 | 39.269 | 219 | 130 | 1 | 10 | 228 | 8 | 223 | 2.80e-50 | 163 |
| MS.gene21577.t1 | MTR_7g065750 | 37.611 | 226 | 129 | 3 | 9 | 229 | 7 | 225 | 7.05e-50 | 162 |
| MS.gene21577.t1 | MTR_5g037380 | 39.301 | 229 | 120 | 5 | 9 | 225 | 5 | 226 | 2.60e-48 | 159 |
| MS.gene21577.t1 | MTR_7g065290 | 39.091 | 220 | 131 | 1 | 9 | 228 | 7 | 223 | 4.68e-48 | 158 |
| MS.gene21577.t1 | MTR_8g087425 | 40.376 | 213 | 120 | 3 | 9 | 219 | 5 | 212 | 5.11e-48 | 157 |
| MS.gene21577.t1 | MTR_7g065270 | 39.545 | 220 | 130 | 1 | 9 | 228 | 7 | 223 | 4.59e-47 | 155 |
| MS.gene21577.t1 | MTR_8g087410 | 40.476 | 210 | 122 | 2 | 9 | 218 | 6 | 212 | 1.75e-46 | 154 |
| MS.gene21577.t1 | MTR_7g065640 | 37.273 | 220 | 117 | 2 | 10 | 229 | 8 | 206 | 5.99e-46 | 152 |
| MS.gene21577.t1 | MTR_2g070200 | 39.545 | 220 | 125 | 7 | 9 | 225 | 4 | 218 | 1.28e-45 | 151 |
| MS.gene21577.t1 | MTR_2g070120 | 39.151 | 212 | 121 | 5 | 9 | 218 | 4 | 209 | 2.17e-45 | 150 |
| MS.gene21577.t1 | MTR_7g065700 | 44.175 | 206 | 106 | 3 | 9 | 212 | 7 | 205 | 3.29e-45 | 150 |
| MS.gene21577.t1 | MTR_8g061950 | 39.640 | 222 | 123 | 7 | 8 | 221 | 4 | 222 | 3.37e-45 | 150 |
| MS.gene21577.t1 | MTR_7g065260 | 40.090 | 222 | 127 | 4 | 9 | 228 | 14 | 231 | 5.27e-45 | 150 |
| MS.gene21577.t1 | MTR_7g065680 | 39.910 | 223 | 123 | 4 | 9 | 229 | 7 | 220 | 6.56e-45 | 149 |
| MS.gene21577.t1 | MTR_2g070150 | 41.827 | 208 | 111 | 6 | 9 | 213 | 4 | 204 | 1.39e-44 | 148 |
| MS.gene21577.t1 | MTR_7g065265 | 37.727 | 220 | 134 | 1 | 9 | 228 | 7 | 223 | 3.89e-44 | 147 |
| MS.gene21577.t1 | MTR_2g070130 | 38.835 | 206 | 120 | 5 | 9 | 213 | 4 | 204 | 3.29e-43 | 145 |
| MS.gene21577.t1 | MTR_2g070180 | 39.801 | 201 | 111 | 6 | 16 | 213 | 11 | 204 | 5.32e-42 | 142 |
| MS.gene21577.t1 | MTR_2g070140 | 40.404 | 198 | 112 | 5 | 22 | 218 | 1 | 193 | 6.12e-41 | 139 |
| MS.gene21577.t1 | MTR_2g070210 | 36.279 | 215 | 125 | 6 | 9 | 218 | 4 | 211 | 8.06e-41 | 139 |
| MS.gene21577.t1 | MTR_2g070060 | 38.140 | 215 | 119 | 6 | 9 | 218 | 4 | 209 | 7.49e-39 | 134 |
| MS.gene21577.t1 | MTR_8g056940 | 39.070 | 215 | 117 | 6 | 9 | 218 | 4 | 209 | 2.55e-38 | 132 |
| MS.gene21577.t1 | MTR_2g070110 | 38.389 | 211 | 123 | 5 | 9 | 218 | 4 | 208 | 1.22e-37 | 131 |
| MS.gene21577.t1 | MTR_3g467430 | 41.209 | 182 | 97 | 6 | 16 | 194 | 16 | 190 | 3.00e-37 | 130 |
| MS.gene21577.t1 | MTR_3g467420 | 41.111 | 180 | 100 | 5 | 16 | 194 | 16 | 190 | 2.54e-36 | 127 |
| MS.gene21577.t1 | MTR_2g070070 | 36.019 | 211 | 129 | 4 | 9 | 218 | 4 | 209 | 2.67e-36 | 127 |
| MS.gene21577.t1 | MTR_4g124130 | 36.937 | 222 | 127 | 8 | 9 | 225 | 4 | 217 | 1.27e-35 | 125 |
| MS.gene21577.t1 | MTR_5g076900 | 35.922 | 206 | 122 | 6 | 16 | 218 | 13 | 211 | 1.08e-31 | 115 |
| MS.gene21577.t1 | MTR_0186s0030 | 45.324 | 139 | 66 | 3 | 9 | 142 | 4 | 137 | 5.35e-30 | 108 |
| MS.gene21577.t1 | MTR_2g072120 | 64.286 | 56 | 19 | 1 | 53 | 107 | 2 | 57 | 4.73e-20 | 81.3 |
| MS.gene21577.t1 | MTR_5g037390 | 40.506 | 79 | 44 | 1 | 35 | 110 | 13 | 91 | 1.37e-13 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21577.t1 | AT2G29470 | 39.367 | 221 | 127 | 5 | 10 | 227 | 8 | 224 | 3.20e-53 | 171 |
| MS.gene21577.t1 | AT3G09270 | 43.694 | 222 | 118 | 6 | 10 | 228 | 7 | 224 | 8.79e-53 | 170 |
| MS.gene21577.t1 | AT1G10370 | 39.381 | 226 | 129 | 4 | 8 | 227 | 4 | 227 | 7.77e-50 | 162 |
| MS.gene21577.t1 | AT2G29450 | 39.013 | 223 | 129 | 4 | 9 | 228 | 6 | 224 | 1.18e-49 | 162 |
| MS.gene21577.t1 | AT2G29420 | 38.009 | 221 | 134 | 2 | 9 | 229 | 9 | 226 | 1.50e-49 | 162 |
| MS.gene21577.t1 | AT2G29490 | 38.222 | 225 | 133 | 4 | 6 | 228 | 4 | 224 | 2.85e-49 | 161 |
| MS.gene21577.t1 | AT2G29460 | 36.607 | 224 | 138 | 4 | 6 | 228 | 4 | 224 | 3.01e-48 | 158 |
| MS.gene21577.t1 | AT1G59670 | 40.553 | 217 | 120 | 6 | 9 | 218 | 6 | 220 | 9.27e-47 | 155 |
| MS.gene21577.t1 | AT5G62480 | 36.697 | 218 | 124 | 5 | 12 | 219 | 11 | 224 | 2.01e-45 | 151 |
| MS.gene21577.t1 | AT1G59700 | 40.000 | 220 | 123 | 6 | 9 | 221 | 6 | 223 | 2.41e-45 | 151 |
| MS.gene21577.t1 | AT1G10360 | 39.381 | 226 | 127 | 4 | 9 | 227 | 5 | 227 | 9.06e-45 | 149 |
| MS.gene21577.t1 | AT2G29440 | 37.885 | 227 | 131 | 6 | 6 | 228 | 3 | 223 | 1.94e-44 | 149 |
| MS.gene21577.t1 | AT1G78370 | 40.196 | 204 | 116 | 6 | 16 | 218 | 11 | 209 | 2.90e-44 | 148 |
| MS.gene21577.t1 | AT2G29480 | 35.111 | 225 | 140 | 4 | 6 | 228 | 4 | 224 | 6.38e-44 | 147 |
| MS.gene21577.t1 | AT1G17180 | 38.182 | 220 | 126 | 6 | 9 | 225 | 4 | 216 | 4.20e-43 | 145 |
| MS.gene21577.t1 | AT1G78340 | 42.938 | 177 | 93 | 5 | 9 | 182 | 4 | 175 | 2.01e-42 | 143 |
| MS.gene21577.t1 | AT1G69930 | 38.140 | 215 | 126 | 4 | 10 | 219 | 13 | 225 | 5.19e-42 | 142 |
| MS.gene21577.t1 | AT1G17170 | 39.336 | 211 | 121 | 6 | 9 | 218 | 4 | 208 | 6.80e-42 | 142 |
| MS.gene21577.t1 | AT1G27130 | 38.140 | 215 | 128 | 3 | 10 | 219 | 7 | 221 | 1.40e-41 | 141 |
| MS.gene21577.t1 | AT1G78320 | 41.799 | 189 | 100 | 6 | 9 | 194 | 4 | 185 | 1.21e-40 | 139 |
| MS.gene21577.t1 | AT1G74590 | 33.772 | 228 | 145 | 5 | 6 | 229 | 4 | 229 | 6.04e-40 | 137 |
| MS.gene21577.t1 | AT1G17190 | 36.574 | 216 | 127 | 6 | 16 | 228 | 12 | 220 | 9.68e-40 | 136 |
| MS.gene21577.t1 | AT1G78380 | 37.104 | 221 | 129 | 6 | 9 | 226 | 4 | 217 | 7.68e-39 | 134 |
| MS.gene21577.t1 | AT1G27140 | 38.739 | 222 | 128 | 5 | 10 | 224 | 7 | 227 | 1.63e-38 | 134 |
| MS.gene21577.t1 | AT1G69920 | 35.909 | 220 | 126 | 6 | 10 | 219 | 35 | 249 | 4.38e-38 | 133 |
| MS.gene21577.t1 | AT1G78360 | 36.111 | 216 | 131 | 5 | 8 | 221 | 3 | 213 | 1.74e-37 | 130 |
| MS.gene21577.t1 | AT1G53680 | 37.264 | 212 | 119 | 7 | 16 | 221 | 14 | 217 | 4.85e-36 | 127 |
| MS.gene21577.t1 | AT3G43800 | 35.909 | 220 | 131 | 6 | 9 | 223 | 5 | 219 | 1.80e-34 | 123 |
| MS.gene21577.t1 | AT5G62480 | 29.302 | 215 | 117 | 4 | 12 | 219 | 11 | 197 | 5.30e-29 | 108 |
| MS.gene21577.t1 | AT5G62480 | 29.302 | 215 | 118 | 4 | 12 | 219 | 11 | 198 | 5.37e-29 | 108 |
| MS.gene21577.t1 | AT1G78320 | 32.979 | 188 | 91 | 6 | 9 | 194 | 4 | 158 | 2.61e-21 | 88.2 |
Find 55 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTATAGCCCTTTCACTTTA+AGG | 0.144203 | 1.3:-62989023 | MS.gene21577:CDS |
| ACAGAGCTCAAGCAAGATTT+TGG | 0.157759 | 1.3:-62988786 | MS.gene21577:CDS |
| AGCTATGTCTACAATGTTAA+TGG | 0.243167 | 1.3:+62986956 | None:intergenic |
| ATGGTATACCCTTCAGATTT+AGG | 0.246118 | 1.3:+62988989 | None:intergenic |
| AATGATCAGAATAAGTTCTA+TGG | 0.275936 | 1.3:-62986987 | MS.gene21577:CDS |
| TGGTATACCCTTCAGATTTA+GGG | 0.296861 | 1.3:+62988990 | None:intergenic |
| AAAGTCCAGGGATAATTTAT+TGG | 0.296970 | 1.3:-62987042 | MS.gene21577:CDS |
| GTATAGCCCTTTCACTTTAA+GGG | 0.310873 | 1.3:-62989022 | MS.gene21577:CDS |
| CGATGGAACGCCACAATTGC+CGG | 0.355415 | 1.3:+62987092 | None:intergenic |
| TTCCATCGAAGCATAATTAA+AGG | 0.356302 | 1.3:-62987077 | MS.gene21577:CDS |
| TTGAATACATTGATGAGATA+TGG | 0.380718 | 1.3:-62988843 | MS.gene21577:CDS |
| ACTGGAGTCTTCTTGTGTAT+TGG | 0.392101 | 1.3:+62988910 | None:intergenic |
| CTTGCTTGAGCTCTGTCATA+TGG | 0.416587 | 1.3:+62988793 | None:intergenic |
| TAGAGGAAGATCACTTCAAT+AGG | 0.428981 | 1.3:-62988957 | MS.gene21577:CDS |
| AGAAGTTTGTGGCTTATGTA+AGG | 0.443336 | 1.3:-62986788 | MS.gene21577:CDS |
| CTTTCACTTTAAGGGTGGTA+TGG | 0.446418 | 1.3:-62989014 | MS.gene21577:CDS |
| AACATTGTAGACATAGCTCT+TGG | 0.450264 | 1.3:-62986951 | MS.gene21577:CDS |
| CTTGAAGTTTCCGGCAATTG+TGG | 0.451600 | 1.3:-62987102 | MS.gene21577:intron |
| CACCTTTAATTATGCTTCGA+TGG | 0.459821 | 1.3:+62987075 | None:intergenic |
| AGATAAAACTACATGGATCT+TGG | 0.472943 | 1.3:-62989044 | MS.gene21577:CDS |
| ATAATCATGGACTCACATAT+AGG | 0.473284 | 1.3:+62988868 | None:intergenic |
| TTTATGGTTTAATAATTTCA+AGG | 0.475281 | 1.3:-62986847 | MS.gene21577:CDS |
| GTGAAGAGCGGGAAAAGTCC+AGG | 0.476986 | 1.3:-62987055 | MS.gene21577:CDS |
| AATGTATTCAACAATAATCA+TGG | 0.478690 | 1.3:+62988855 | None:intergenic |
| ATGATCAGAATAAGTTCTAT+GGG | 0.489286 | 1.3:-62986986 | MS.gene21577:CDS |
| TCTTCCTCTATACTATCATA+TGG | 0.496062 | 1.3:+62988970 | None:intergenic |
| CATAATTAAAGGTGAAGAGC+GGG | 0.504869 | 1.3:-62987066 | MS.gene21577:CDS |
| ATTAAACCATAAATGCAAGC+GGG | 0.510641 | 1.3:+62986857 | None:intergenic |
| CATGCACAAGCTAATTAAGA+TGG | 0.520586 | 1.3:-62989070 | MS.gene21577:CDS |
| TTTCCATCATGAACCAGCAC+TGG | 0.520744 | 1.3:+62988892 | None:intergenic |
| GGATTATATTGAAGAAGTTG+AGG | 0.529265 | 1.3:+62988931 | None:intergenic |
| CTCTGAGCAAGAGAAGTTTG+TGG | 0.536542 | 1.3:-62986799 | MS.gene21577:CDS |
| GCTCTGTCATATGGATCAGC+AGG | 0.539671 | 1.3:+62988802 | None:intergenic |
| CATACCACCCTTAAAGTGAA+AGG | 0.544844 | 1.3:+62989015 | None:intergenic |
| TCGCTCCAATAAATTATCCC+TGG | 0.548240 | 1.3:+62987037 | None:intergenic |
| GGAGCGACTCGGAGTTGTTG+AGG | 0.560264 | 1.3:-62987021 | MS.gene21577:CDS |
| ACTCCAGTGCTGGTTCATGA+TGG | 0.570563 | 1.3:-62988895 | MS.gene21577:CDS |
| ATACCACCCTTAAAGTGAAA+GGG | 0.572861 | 1.3:+62989016 | None:intergenic |
| TATACCATATGATAGTATAG+AGG | 0.574275 | 1.3:-62988974 | MS.gene21577:CDS |
| GATAATTTATTGGAGCGACT+CGG | 0.578052 | 1.3:-62987032 | MS.gene21577:CDS |
| ACACAAGAAGACTCCAGTGC+TGG | 0.585534 | 1.3:-62988905 | MS.gene21577:CDS |
| GGTATGGACCCTAAATCTGA+AGG | 0.586714 | 1.3:-62988998 | MS.gene21577:CDS |
| TTAAACCATAAATGCAAGCG+GGG | 0.603941 | 1.3:+62986858 | None:intergenic |
| TAGCCCTTTCACTTTAAGGG+TGG | 0.610464 | 1.3:-62989019 | MS.gene21577:CDS |
| TATTAAACCATAAATGCAAG+CGG | 0.610901 | 1.3:+62986856 | None:intergenic |
| GGTTAAATATGTTGATGACA+TGG | 0.614212 | 1.3:-62988764 | MS.gene21577:intron |
| ATGGCAGAGATAAAACTACA+TGG | 0.623570 | 1.3:-62989051 | MS.gene21577:CDS |
| CACAAACTTCTCTTGCTCAG+AGG | 0.635555 | 1.3:+62986800 | None:intergenic |
| GTATGGACCCTAAATCTGAA+GGG | 0.640820 | 1.3:-62988997 | MS.gene21577:CDS |
| TGAAGAGCGGGAAAAGTCCA+GGG | 0.655285 | 1.3:-62987054 | MS.gene21577:CDS |
| GCATAATTAAAGGTGAAGAG+CGG | 0.664372 | 1.3:-62987067 | MS.gene21577:CDS |
| TAAACCATAAATGCAAGCGG+GGG | 0.664553 | 1.3:+62986859 | None:intergenic |
| GCAGGAAGCAATGAGTTGTG+TGG | 0.667285 | 1.3:+62988820 | None:intergenic |
| TGATCAGAATAAGTTCTATG+GGG | 0.669740 | 1.3:-62986985 | MS.gene21577:CDS |
| GATCAGAATAAGTTCTATGG+GGG | 0.670673 | 1.3:-62986984 | MS.gene21577:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACTTTAAATTGAGTTAA+AGG | - | chr1.3:62987925-62987944 | MS.gene21577:intron | 15.0% |
| !! | AAGTTATTAACGTTAAAATT+TGG | - | chr1.3:62988192-62988211 | MS.gene21577:intron | 15.0% |
| !! | ATTCAAACTAACAATAATAT+TGG | - | chr1.3:62988692-62988711 | MS.gene21577:intron | 15.0% |
| !! | GAAACAAAAAAATAAGTTAA+GGG | + | chr1.3:62988279-62988298 | None:intergenic | 15.0% |
| !! | TCTTGAATATAGTTATAAAT+AGG | + | chr1.3:62987969-62987988 | None:intergenic | 15.0% |
| !! | TTAAAGAAAAAATAGTACTT+TGG | + | chr1.3:62987581-62987600 | None:intergenic | 15.0% |
| !! | TTTATGGTTTAATAATTTCA+AGG | - | chr1.3:62988977-62988996 | MS.gene21577:CDS | 15.0% |
| !! | TTTATGTTTAAAAACTTCAT+TGG | + | chr1.3:62987836-62987855 | None:intergenic | 15.0% |
| !!! | ATTTTAACGTTAATAACTTA+TGG | + | chr1.3:62988191-62988210 | None:intergenic | 15.0% |
| !!! | CATTTTGAAACAAATTTTTT+TGG | + | chr1.3:62987477-62987496 | None:intergenic | 15.0% |
| !!! | CTCAATTTAAAGTTTTAAAA+AGG | + | chr1.3:62987894-62987913 | None:intergenic | 15.0% |
| !!! | GACTATAACTAATATATTTT+AGG | - | chr1.3:62988115-62988134 | MS.gene21577:intron | 15.0% |
| !!! | TTTTAACGTTAATAACTTAT+GGG | + | chr1.3:62988190-62988209 | None:intergenic | 15.0% |
| !! | AAATTATCCTAATCAACTAT+TGG | + | chr1.3:62987615-62987634 | None:intergenic | 20.0% |
| !! | AAGTTATTAACGTTACAATT+TGG | + | chr1.3:62988562-62988581 | None:intergenic | 20.0% |
| !! | AATAGTTGATTAGGATAATT+TGG | - | chr1.3:62987614-62987633 | MS.gene21577:intron | 20.0% |
| !! | AATGAATGTATTAGAGTTAA+GGG | + | chr1.3:62988372-62988391 | None:intergenic | 20.0% |
| !! | AATGTATTCAACAATAATCA+TGG | + | chr1.3:62986972-62986991 | None:intergenic | 20.0% |
| !! | AGTAATGTTTATAAGATAGA+AGG | + | chr1.3:62988650-62988669 | None:intergenic | 20.0% |
| !! | ATGTAATTTATCTCTTTGAA+TGG | - | chr1.3:62987756-62987775 | MS.gene21577:intron | 20.0% |
| !! | CGAAACAAAAAAATAAGTTA+AGG | + | chr1.3:62988280-62988299 | None:intergenic | 20.0% |
| !! | GAAACCAAAAAATAAGTTAA+GGG | + | chr1.3:62988463-62988444 | None:intergenic | 20.0% |
| !! | GTAACATAGTATTAATTGAA+GGG | + | chr1.3:62987551-62987570 | None:intergenic | 20.0% |
| !! | TAAGATAGAAGGTAAAATAT+AGG | + | chr1.3:62988639-62988658 | None:intergenic | 20.0% |
| !! | TATAGGCTTAATTAATGATT+TGG | + | chr1.3:62988622-62988641 | None:intergenic | 20.0% |
| !! | TGTAACATAGTATTAATTGA+AGG | + | chr1.3:62987552-62987571 | None:intergenic | 20.0% |
| !!! | AAAAGATACTCATTTTGAAA+CGG | - | chr1.3:62987697-62987716 | MS.gene21577:intron | 20.0% |
| !!! | AACGAAACTTTTAATAGTTA+AGG | - | chr1.3:62988503-62988522 | MS.gene21577:intron | 20.0% |
| !!! | AACGAAACTTTTAATAGTTA+AGG | + | chr1.3:62988522-62988503 | None:intergenic | 20.0% |
| !!! | AACTATTAAAAGTTTCGTTT+TGG | - | chr1.3:62988252-62988271 | MS.gene21577:intron | 20.0% |
| !!! | AACTATTAAAAGTTTCGTTT+TGG | + | chr1.3:62988271-62988252 | None:intergenic | 20.0% |
| !!! | ACGAAACTTTTAATAGTTAA+GGG | - | chr1.3:62988504-62988523 | MS.gene21577:intron | 20.0% |
| !!! | ACGAAACTTTTAATAGTTAA+GGG | + | chr1.3:62988523-62988504 | None:intergenic | 20.0% |
| !!! | ATCTTTTGTGAAATTTATTG+AGG | - | chr1.3:62988896-62988915 | MS.gene21577:CDS | 20.0% |
| !!! | CCAATAATTTTCAATAGTAA+GGG | + | chr1.3:62988096-62988115 | None:intergenic | 20.0% |
| !!! | CTTATTTTTTTGTTTCGTTT+TGG | - | chr1.3:62988283-62988302 | MS.gene21577:intron | 20.0% |
| !!! | TAGTCTCTTAACTTATTTTT+TGG | + | chr1.3:62988451-62988470 | None:intergenic | 20.0% |
| !!! | TCCAATAATTTTCAATAGTA+AGG | + | chr1.3:62988097-62988116 | None:intergenic | 20.0% |
| ! | AAACAAACCAATAGTTGATT+AGG | - | chr1.3:62987605-62987624 | MS.gene21577:intron | 25.0% |
| ! | AATGATCAGAATAAGTTCTA+TGG | - | chr1.3:62988837-62988856 | MS.gene21577:CDS | 25.0% |
| ! | ATACATTCATTCTAACGTAA+AGG | - | chr1.3:62988381-62988400 | MS.gene21577:intron | 25.0% |
| ! | ATATATCATCATGTAGACAA+TGG | + | chr1.3:62987295-62987314 | None:intergenic | 25.0% |
| ! | ATGATCAGAATAAGTTCTAT+GGG | - | chr1.3:62988838-62988857 | MS.gene21577:CDS | 25.0% |
| ! | CATAGATCAAAAATGAAGTT+TGG | - | chr1.3:62987803-62987822 | MS.gene21577:intron | 25.0% |
| ! | CCCTTACTATTGAAAATTAT+TGG | - | chr1.3:62988093-62988112 | MS.gene21577:intron | 25.0% |
| ! | CGAAACCAAAAAATAAGTTA+AGG | + | chr1.3:62988462-62988443 | None:intergenic | 25.0% |
| ! | GAAACCAAAAAGTAACTTAA+GGG | - | chr1.3:62988535-62988554 | MS.gene21577:intron | 25.0% |
| ! | GAAACCAAAAAGTAACTTAA+GGG | + | chr1.3:62988554-62988535 | None:intergenic | 25.0% |
| ! | GAATGAATGTATTAGAGTTA+AGG | + | chr1.3:62988373-62988392 | None:intergenic | 25.0% |
| ! | GATAGATGACTAATTTGATT+TGG | + | chr1.3:62987226-62987245 | None:intergenic | 25.0% |
| ! | GCCTCTAATTGAAAAAATAA+TGG | - | chr1.3:62989058-62989077 | MS.gene21577:CDS | 25.0% |
| ! | GTAACCAACAAATAACTTAA+GGG | - | chr1.3:62988595-62988614 | MS.gene21577:intron | 25.0% |
| ! | GTAACCAACAAATAACTTAA+GGG | + | chr1.3:62988614-62988595 | None:intergenic | 25.0% |
| ! | TATACCATATGATAGTATAG+AGG | - | chr1.3:62986850-62986869 | MS.gene21577:CDS | 25.0% |
| ! | TATTAAACCATAAATGCAAG+CGG | + | chr1.3:62988971-62988990 | None:intergenic | 25.0% |
| ! | TGTAACCAACAAATAACTTA+AGG | - | chr1.3:62988594-62988613 | MS.gene21577:intron | 25.0% |
| ! | TGTAACCAACAAATAACTTA+AGG | + | chr1.3:62988613-62988594 | None:intergenic | 25.0% |
| ! | TTGAATACATTGATGAGATA+TGG | - | chr1.3:62986981-62987000 | MS.gene21577:CDS | 25.0% |
| !! | AGTTTTGCCTAAAAAATTAG+TGG | + | chr1.3:62987166-62987185 | None:intergenic | 25.0% |
| !! | ATAATTTTCAATAGTAAGGG+AGG | + | chr1.3:62988093-62988112 | None:intergenic | 25.0% |
| !! | ATTTAAGTTAAATGACTTCC+GGG | + | chr1.3:62987190-62987209 | None:intergenic | 25.0% |
| !! | GATTTAAGTTAAATGACTTC+CGG | + | chr1.3:62987191-62987210 | None:intergenic | 25.0% |
| !! | TTAGTTTGAATCTAGATAGA+AGG | + | chr1.3:62988683-62988702 | None:intergenic | 25.0% |
| !! | TTTAGGCTTAATTACTCTTT+TGG | - | chr1.3:62988132-62988151 | MS.gene21577:intron | 25.0% |
| !!! | ACATGTTCCACTAATTTTTT+AGG | - | chr1.3:62987156-62987175 | MS.gene21577:intron | 25.0% |
| !!! | CTTATTTTTTGGTTTCGTTT+TGG | - | chr1.3:62988314-62988333 | MS.gene21577:intron | 25.0% |
| !!! | CTTATTTTTTGGTTTCGTTT+TGG | + | chr1.3:62988333-62988314 | None:intergenic | 25.0% |
| !!! | GCCATTATTTTTTCAATTAG+AGG | + | chr1.3:62989062-62989081 | None:intergenic | 25.0% |
| !!! | GTTATTTGTTGGTTACATTT+TGG | - | chr1.3:62988163-62988182 | MS.gene21577:intron | 25.0% |
| !!! | GTTATTTGTTGGTTACATTT+TGG | + | chr1.3:62988182-62988163 | None:intergenic | 25.0% |
| !!! | TGGTCTCTTAACTTATTTTT+TGG | - | chr1.3:62988303-62988322 | MS.gene21577:intron | 25.0% |
| !!! | TGGTCTCTTAACTTATTTTT+TGG | + | chr1.3:62988322-62988303 | None:intergenic | 25.0% |
| AAAGTCCAGGGATAATTTAT+TGG | - | chr1.3:62988782-62988801 | MS.gene21577:CDS | 30.0% | |
| AAAGTTAAGTCACTAGTGTA+AGG | + | chr1.3:62987257-62987276 | None:intergenic | 30.0% | |
| AGATAAAACTACATGGATCT+TGG | - | chr1.3:62986780-62986799 | MS.gene21577:CDS | 30.0% | |
| AGCTATGTCTACAATGTTAA+TGG | + | chr1.3:62988871-62988890 | None:intergenic | 30.0% | |
| ATAATCATGGACTCACATAT+AGG | + | chr1.3:62986959-62986978 | None:intergenic | 30.0% | |
| ATTAAACCATAAATGCAAGC+GGG | + | chr1.3:62988970-62988989 | None:intergenic | 30.0% | |
| CGAAACCAAAAAGTAACTTA+AGG | - | chr1.3:62988534-62988553 | MS.gene21577:intron | 30.0% | |
| CGAAACCAAAAAGTAACTTA+AGG | + | chr1.3:62988553-62988534 | None:intergenic | 30.0% | |
| GAACATGTATCATGATAGAA+AGG | + | chr1.3:62987144-62987163 | None:intergenic | 30.0% | |
| GGATTATATTGAAGAAGTTG+AGG | + | chr1.3:62986896-62986915 | None:intergenic | 30.0% | |
| TCTTCCTCTATACTATCATA+TGG | + | chr1.3:62986857-62986876 | None:intergenic | 30.0% | |
| TGATAACAAGATCACAATCT+TGG | - | chr1.3:62987360-62987379 | MS.gene21577:intron | 30.0% | |
| TGATCAGAATAAGTTCTATG+GGG | - | chr1.3:62988839-62988858 | MS.gene21577:CDS | 30.0% | |
| TTAGAAGTCTTACTCTTGAT+TGG | + | chr1.3:62987992-62988011 | None:intergenic | 30.0% | |
| TTCCATCGAAGCATAATTAA+AGG | - | chr1.3:62988747-62988766 | MS.gene21577:intron | 30.0% | |
| ! | ATCAACTAGAGTCCAATTTT+AGG | + | chr1.3:62987344-62987363 | None:intergenic | 30.0% |
| ! | TCAACTAGAGTCCAATTTTA+GGG | + | chr1.3:62987343-62987362 | None:intergenic | 30.0% |
| !! | GGTTAAATATGTTGATGACA+TGG | - | chr1.3:62987060-62987079 | MS.gene21577:CDS | 30.0% |
| !! | TTCAAAATGAATGTCGCTTT+CGG | - | chr1.3:62987488-62987507 | MS.gene21577:intron | 30.0% |
| !!! | ATTTTTTAGGCAAAACTACC+CGG | - | chr1.3:62987169-62987188 | MS.gene21577:intron | 30.0% |
| !!! | GTTACTTTTTGGTTTCGTTT+TGG | - | chr1.3:62988223-62988242 | MS.gene21577:intron | 30.0% |
| !!! | GTTACTTTTTGGTTTCGTTT+TGG | + | chr1.3:62988242-62988223 | None:intergenic | 30.0% |
| !!! | TGGTCCCTTAACTTATTTTT+TGG | - | chr1.3:62988272-62988291 | MS.gene21577:intron | 30.0% |
| AACATTGTAGACATAGCTCT+TGG | - | chr1.3:62988873-62988892 | MS.gene21577:CDS | 35.0% | |
| AGAAGTTTGTGGCTTATGTA+AGG | - | chr1.3:62989036-62989055 | MS.gene21577:CDS | 35.0% | |
| ATACCACCCTTAAAGTGAAA+GGG | + | chr1.3:62986811-62986830 | None:intergenic | 35.0% | |
| ATGGCAGAGATAAAACTACA+TGG | - | chr1.3:62986773-62986792 | MS.gene21577:CDS | 35.0% | |
| ATGGTATACCCTTCAGATTT+AGG | + | chr1.3:62986838-62986857 | None:intergenic | 35.0% | |
| CACCTTTAATTATGCTTCGA+TGG | + | chr1.3:62988752-62988771 | None:intergenic | 35.0% | |
| CATAATTAAAGGTGAAGAGC+GGG | - | chr1.3:62988758-62988777 | MS.gene21577:intron | 35.0% | |
| CTTTAAGCACACCAACAAAA+AGG | - | chr1.3:62988020-62988039 | MS.gene21577:intron | 35.0% | |
| GATAATTTATTGGAGCGACT+CGG | - | chr1.3:62988792-62988811 | MS.gene21577:CDS | 35.0% | |
| GATCAGAATAAGTTCTATGG+GGG | - | chr1.3:62988840-62988859 | MS.gene21577:CDS | 35.0% | |
| GCATAATTAAAGGTGAAGAG+CGG | - | chr1.3:62988757-62988776 | MS.gene21577:intron | 35.0% | |
| GTATAGCCCTTTCACTTTAA+GGG | - | chr1.3:62986802-62986821 | MS.gene21577:CDS | 35.0% | |
| TAGAGGAAGATCACTTCAAT+AGG | - | chr1.3:62986867-62986886 | MS.gene21577:CDS | 35.0% | |
| TGGTATACCCTTCAGATTTA+GGG | + | chr1.3:62986837-62986856 | None:intergenic | 35.0% | |
| TGGTCCCTTAAGTTATTTGT+TGG | - | chr1.3:62988152-62988171 | MS.gene21577:intron | 35.0% | |
| TGGTCCCTTAAGTTATTTGT+TGG | + | chr1.3:62988171-62988152 | None:intergenic | 35.0% | |
| TTAAACCATAAATGCAAGCG+GGG | + | chr1.3:62988969-62988988 | None:intergenic | 35.0% | |
| TTCACACTCAACCCTAAAAT+TGG | - | chr1.3:62987329-62987348 | MS.gene21577:intron | 35.0% | |
| TTCCTTAATCTGTGTGCAAT+TGG | - | chr1.3:62987671-62987690 | MS.gene21577:intron | 35.0% | |
| ! | TGCATATGAGACCTTTTTGT+TGG | + | chr1.3:62988034-62988053 | None:intergenic | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr1.3:62987451-62987470 | None:intergenic | 35.0% |
| !!! | CTCAGAGGTATTTTCTTTGA+TGG | + | chr1.3:62989012-62989031 | None:intergenic | 35.0% |
| !!! | GATACTCATTTTGAAACGGA+TGG | - | chr1.3:62987701-62987720 | MS.gene21577:intron | 35.0% |
| !!! | TGGTCCCTTAAGTTACTTTT+TGG | - | chr1.3:62988212-62988231 | MS.gene21577:intron | 35.0% |
| !!! | TGGTCCCTTAAGTTACTTTT+TGG | + | chr1.3:62988231-62988212 | None:intergenic | 35.0% |
| !!! | TGTTTTTTTCCATGTCAAGC+TGG | + | chr1.3:62987862-62987881 | None:intergenic | 35.0% |
| ACTGGAGTCTTCTTGTGTAT+TGG | + | chr1.3:62986917-62986936 | None:intergenic | 40.0% | |
| AGCCAATTGCACACAGATTA+AGG | + | chr1.3:62987676-62987695 | None:intergenic | 40.0% | |
| CATAAATGACCAGCTTGACA+TGG | - | chr1.3:62987850-62987869 | MS.gene21577:intron | 40.0% | |
| CATACCACCCTTAAAGTGAA+AGG | + | chr1.3:62986812-62986831 | None:intergenic | 40.0% | |
| GGATCAATGCTTGAAGTTTC+CGG | - | chr1.3:62988713-62988732 | MS.gene21577:intron | 40.0% | |
| GGTATAGCCCTTTCACTTTA+AGG | - | chr1.3:62986801-62986820 | MS.gene21577:CDS | 40.0% | |
| GTATGGACCCTAAATCTGAA+GGG | - | chr1.3:62986827-62986846 | MS.gene21577:CDS | 40.0% | |
| TAAACCATAAATGCAAGCGG+GGG | + | chr1.3:62988968-62988987 | None:intergenic | 40.0% | |
| TAAAGGACCAAAGTGGTTGA+CGG | - | chr1.3:62988398-62988417 | MS.gene21577:intron | 40.0% | |
| TCGCTCCAATAAATTATCCC+TGG | + | chr1.3:62988790-62988809 | None:intergenic | 40.0% | |
| TCTAACGTAAAGGACCAAAG+TGG | - | chr1.3:62988391-62988410 | MS.gene21577:intron | 40.0% | |
| ! | ACAGAGCTCAAGCAAGATTT+TGG | - | chr1.3:62987038-62987057 | MS.gene21577:CDS | 40.0% |
| ! | CAGAGCTCAAGCAAGATTTT+GGG | - | chr1.3:62987039-62987058 | MS.gene21577:CDS | 40.0% |
| ! | CTTTCACTTTAAGGGTGGTA+TGG | - | chr1.3:62986810-62986829 | MS.gene21577:CDS | 40.0% |
| !! | GAGGTATTTTCTTTGATGGC+TGG | + | chr1.3:62989008-62989027 | None:intergenic | 40.0% |
| CACAAACTTCTCTTGCTCAG+AGG | + | chr1.3:62989027-62989046 | None:intergenic | 45.0% | |
| CTCTGAGCAAGAGAAGTTTG+TGG | - | chr1.3:62989025-62989044 | MS.gene21577:CDS | 45.0% | |
| CTTGAAGTTTCCGGCAATTG+TGG | - | chr1.3:62988722-62988741 | MS.gene21577:intron | 45.0% | |
| CTTGCTTGAGCTCTGTCATA+TGG | + | chr1.3:62987034-62987053 | None:intergenic | 45.0% | |
| GGTATGGACCCTAAATCTGA+AGG | - | chr1.3:62986826-62986845 | MS.gene21577:CDS | 45.0% | |
| GTTGACGGAGGAAGAGTTAA+GGG | - | chr1.3:62988413-62988432 | MS.gene21577:intron | 45.0% | |
| TGTTGGTGTGCTTAAAGCGA+AGG | + | chr1.3:62988017-62988036 | None:intergenic | 45.0% | |
| TTTCCATCATGAACCAGCAC+TGG | + | chr1.3:62986935-62986954 | None:intergenic | 45.0% | |
| ! | TAGCCCTTTCACTTTAAGGG+TGG | - | chr1.3:62986805-62986824 | MS.gene21577:CDS | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr1.3:62987448-62987467 | None:intergenic | 45.0% |
| !!! | AAAACAAATTTTTAATATAT+GGG | + | chr1.3:62988069-62988088 | None:intergenic | 5.0% |
| !!! | TAAAACAAATTTTTAATATA+TGG | + | chr1.3:62988070-62988089 | None:intergenic | 5.0% |
| ACACAAGAAGACTCCAGTGC+TGG | - | chr1.3:62986919-62986938 | MS.gene21577:CDS | 50.0% | |
| GATTCCCCCGCTTGCATTTA+TGG | - | chr1.3:62988961-62988980 | MS.gene21577:CDS | 50.0% | |
| GCAGGAAGCAATGAGTTGTG+TGG | + | chr1.3:62987007-62987026 | None:intergenic | 50.0% | |
| GCTCTGTCATATGGATCAGC+AGG | + | chr1.3:62987025-62987044 | None:intergenic | 50.0% | |
| GGTTGACGGAGGAAGAGTTA+AGG | - | chr1.3:62988412-62988431 | MS.gene21577:intron | 50.0% | |
| TCTTCCTCCGTCAACCACTT+TGG | + | chr1.3:62988408-62988427 | None:intergenic | 50.0% | |
| TGAAGAGCGGGAAAAGTCCA+GGG | - | chr1.3:62988770-62988789 | MS.gene21577:CDS | 50.0% | |
| !! | ACTCCAGTGCTGGTTCATGA+TGG | - | chr1.3:62986929-62986948 | MS.gene21577:CDS | 50.0% |
| AGGACCAAAGTGGTTGACGG+AGG | - | chr1.3:62988401-62988420 | MS.gene21577:intron | 55.0% | |
| CGATGGAACGCCACAATTGC+CGG | + | chr1.3:62988735-62988754 | None:intergenic | 55.0% | |
| GTGAAGAGCGGGAAAAGTCC+AGG | - | chr1.3:62988769-62988788 | MS.gene21577:CDS | 55.0% | |
| ! | GGAGCGACTCGGAGTTGTTG+AGG | - | chr1.3:62988803-62988822 | MS.gene21577:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 62986755 | 62989091 | 62986755 | ID=MS.gene21577 |
| chr1.3 | mRNA | 62986755 | 62989091 | 62986755 | ID=MS.gene21577.t1;Parent=MS.gene21577 |
| chr1.3 | exon | 62988765 | 62989091 | 62988765 | ID=MS.gene21577.t1.exon1;Parent=MS.gene21577.t1 |
| chr1.3 | CDS | 62988765 | 62989091 | 62988765 | ID=cds.MS.gene21577.t1;Parent=MS.gene21577.t1 |
| chr1.3 | exon | 62986755 | 62987117 | 62986755 | ID=MS.gene21577.t1.exon2;Parent=MS.gene21577.t1 |
| chr1.3 | CDS | 62986755 | 62987117 | 62986755 | ID=cds.MS.gene21577.t1;Parent=MS.gene21577.t1 |
| Gene Sequence |
| Protein sequence |
