Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38172.t1 | 1ZGD_A | 99.7 | 312 | 1 | 0 | 1 | 312 | 1 | 312 | 1.50E-176 | 628.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38172.t1 | P26690 | 84.8 | 310 | 47 | 0 | 3 | 312 | 4 | 313 | 8.2e-155 | 547.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38172.t1 | Q40309 | 99.7 | 312 | 1 | 0 | 1 | 312 | 1 | 312 | 1.1e-176 | 628.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene38172 | -0.812304 | 4.54E-51 | -1.69E-46 |
| MS.gene049217 | MS.gene38172 | -0.826516 | 2.60E-54 | -1.69E-46 |
| MS.gene049222 | MS.gene38172 | -0.822346 | 2.49E-53 | -1.69E-46 |
| MS.gene049232 | MS.gene38172 | -0.85364 | 2.09E-61 | -1.69E-46 |
| MS.gene049259 | MS.gene38172 | 0.813782 | 2.15E-51 | -1.69E-46 |
| MS.gene049281 | MS.gene38172 | 0.818017 | 2.44E-52 | -1.69E-46 |
| MS.gene049285 | MS.gene38172 | -0.828058 | 1.11E-54 | -1.69E-46 |
| MS.gene049320 | MS.gene38172 | -0.850674 | 1.46E-60 | -1.69E-46 |
| MS.gene049483 | MS.gene38172 | 0.84721 | 1.34E-59 | -1.69E-46 |
| MS.gene049611 | MS.gene38172 | 0.834779 | 2.46E-56 | -1.69E-46 |
| MS.gene049627 | MS.gene38172 | -0.824534 | 7.66E-54 | -1.69E-46 |
| MS.gene049634 | MS.gene38172 | 0.826763 | 2.27E-54 | -1.69E-46 |
| MS.gene05010 | MS.gene38172 | -0.845356 | 4.28E-59 | -1.69E-46 |
| MS.gene050129 | MS.gene38172 | 0.80831 | 3.30E-50 | -1.69E-46 |
| MS.gene050163 | MS.gene38172 | -0.816347 | 5.80E-52 | -1.69E-46 |
| MS.gene050165 | MS.gene38172 | -0.809666 | 1.69E-50 | -1.69E-46 |
| MS.gene050170 | MS.gene38172 | -0.808906 | 2.46E-50 | -1.69E-46 |
| MS.gene050173 | MS.gene38172 | 0.803625 | 3.19E-49 | -1.69E-46 |
| MS.gene050216 | MS.gene38172 | -0.855259 | 7.12E-62 | -1.69E-46 |
| MS.gene050323 | MS.gene38172 | -0.824426 | 8.12E-54 | -1.69E-46 |
| MS.gene050333 | MS.gene38172 | -0.810124 | 1.35E-50 | -1.69E-46 |
| MS.gene050363 | MS.gene38172 | 0.854227 | 1.42E-61 | -1.69E-46 |
| MS.gene050380 | MS.gene38172 | 0.848597 | 5.54E-60 | -1.69E-46 |
| MS.gene050381 | MS.gene38172 | 0.900448 | 7.25E-78 | -1.69E-46 |
| MS.gene050496 | MS.gene38172 | -0.827329 | 1.66E-54 | -1.69E-46 |
| MS.gene050504 | MS.gene38172 | -0.870696 | 1.20E-66 | -1.69E-46 |
| MS.gene050518 | MS.gene38172 | -0.832628 | 8.48E-56 | -1.69E-46 |
| MS.gene050577 | MS.gene38172 | -0.819903 | 9.10E-53 | -1.69E-46 |
| MS.gene050612 | MS.gene38172 | -0.856227 | 3.71E-62 | -1.69E-46 |
| MS.gene050647 | MS.gene38172 | 0.804776 | 1.84E-49 | -1.69E-46 |
| MS.gene050675 | MS.gene38172 | -0.833588 | 4.89E-56 | -1.69E-46 |
| MS.gene050699 | MS.gene38172 | -0.806266 | 8.94E-50 | -1.69E-46 |
| MS.gene050772 | MS.gene38172 | -0.809546 | 1.79E-50 | -1.69E-46 |
| MS.gene05080 | MS.gene38172 | -0.807597 | 4.68E-50 | -1.69E-46 |
| MS.gene050868 | MS.gene38172 | -0.855544 | 5.87E-62 | -1.69E-46 |
| MS.gene050871 | MS.gene38172 | -0.857504 | 1.56E-62 | -1.69E-46 |
| MS.gene050883 | MS.gene38172 | 0.916067 | 2.78E-85 | -1.69E-46 |
| MS.gene050986 | MS.gene38172 | -0.845286 | 4.46E-59 | -1.69E-46 |
| MS.gene051044 | MS.gene38172 | 0.805074 | 1.59E-49 | -1.69E-46 |
| MS.gene05104 | MS.gene38172 | 0.839296 | 1.72E-57 | -1.69E-46 |
| MS.gene051127 | MS.gene38172 | 0.903409 | 3.57E-79 | -1.69E-46 |
| MS.gene051138 | MS.gene38172 | 0.822996 | 1.76E-53 | -1.69E-46 |
| MS.gene051268 | MS.gene38172 | -0.827811 | 1.27E-54 | -1.69E-46 |
| MS.gene051364 | MS.gene38172 | 0.824589 | 7.44E-54 | -1.69E-46 |
| MS.gene051366 | MS.gene38172 | 0.808572 | 2.90E-50 | -1.69E-46 |
| MS.gene051410 | MS.gene38172 | 0.803691 | 3.09E-49 | -1.69E-46 |
| MS.gene05141 | MS.gene38172 | 0.857459 | 1.61E-62 | -1.69E-46 |
| MS.gene051509 | MS.gene38172 | -0.810145 | 1.33E-50 | -1.69E-46 |
| MS.gene051551 | MS.gene38172 | -0.801309 | 9.57E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene38172 | -0.806757 | 7.04E-50 | -1.69E-46 |
| MS.gene051564 | MS.gene38172 | -0.818073 | 2.37E-52 | -1.69E-46 |
| MS.gene051694 | MS.gene38172 | -0.821957 | 3.06E-53 | -1.69E-46 |
| MS.gene051858 | MS.gene38172 | -0.80155 | 8.54E-49 | -1.69E-46 |
| MS.gene051946 | MS.gene38172 | 0.896747 | 2.74E-76 | -1.69E-46 |
| MS.gene052089 | MS.gene38172 | 0.80086 | 1.18E-48 | -1.69E-46 |
| MS.gene052164 | MS.gene38172 | -0.836021 | 1.19E-56 | -1.69E-46 |
| MS.gene05234 | MS.gene38172 | 0.818666 | 1.74E-52 | -1.69E-46 |
| MS.gene052482 | MS.gene38172 | -0.852287 | 5.10E-61 | -1.69E-46 |
| MS.gene052486 | MS.gene38172 | -0.859992 | 2.82E-63 | -1.69E-46 |
| MS.gene052566 | MS.gene38172 | 0.804006 | 2.66E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene38172 | -0.836092 | 1.15E-56 | -1.69E-46 |
| MS.gene053069 | MS.gene38172 | 0.837093 | 6.37E-57 | -1.69E-46 |
| MS.gene053203 | MS.gene38172 | -0.839345 | 1.67E-57 | -1.69E-46 |
| MS.gene053213 | MS.gene38172 | -0.815748 | 7.89E-52 | -1.69E-46 |
| MS.gene053286 | MS.gene38172 | -0.817134 | 3.86E-52 | -1.69E-46 |
| MS.gene053420 | MS.gene38172 | 0.89052 | 9.15E-74 | -1.69E-46 |
| MS.gene053436 | MS.gene38172 | -0.813016 | 3.17E-51 | -1.69E-46 |
| MS.gene053488 | MS.gene38172 | 0.8168 | 4.59E-52 | -1.69E-46 |
| MS.gene053549 | MS.gene38172 | 0.853966 | 1.68E-61 | -1.69E-46 |
| MS.gene053561 | MS.gene38172 | 0.876345 | 1.50E-68 | -1.69E-46 |
| MS.gene053574 | MS.gene38172 | -0.830065 | 3.62E-55 | -1.69E-46 |
| MS.gene053626 | MS.gene38172 | -0.81956 | 1.09E-52 | -1.69E-46 |
| MS.gene053826 | MS.gene38172 | 0.843861 | 1.08E-58 | -1.69E-46 |
| MS.gene054003 | MS.gene38172 | -0.816394 | 5.66E-52 | -1.69E-46 |
| MS.gene054054 | MS.gene38172 | 0.803163 | 3.98E-49 | -1.69E-46 |
| MS.gene054056 | MS.gene38172 | 0.815105 | 1.10E-51 | -1.69E-46 |
| MS.gene054595 | MS.gene38172 | -0.845858 | 3.13E-59 | -1.69E-46 |
| MS.gene054616 | MS.gene38172 | 0.846664 | 1.88E-59 | -1.69E-46 |
| MS.gene054642 | MS.gene38172 | -0.816728 | 4.76E-52 | -1.69E-46 |
| MS.gene054706 | MS.gene38172 | 0.81048 | 1.13E-50 | -1.69E-46 |
| MS.gene054707 | MS.gene38172 | 0.832265 | 1.04E-55 | -1.69E-46 |
| MS.gene054708 | MS.gene38172 | 0.886509 | 3.21E-72 | -1.69E-46 |
| MS.gene05470 | MS.gene38172 | -0.806014 | 1.01E-49 | -1.69E-46 |
| MS.gene054954 | MS.gene38172 | -0.834365 | 3.13E-56 | -1.69E-46 |
| MS.gene055124 | MS.gene38172 | 0.876045 | 1.91E-68 | -1.69E-46 |
| MS.gene055139 | MS.gene38172 | 0.842991 | 1.84E-58 | -1.69E-46 |
| MS.gene055154 | MS.gene38172 | 0.889465 | 2.36E-73 | -1.69E-46 |
| MS.gene055202 | MS.gene38172 | 0.873274 | 1.67E-67 | -1.69E-46 |
| MS.gene055362 | MS.gene38172 | -0.839587 | 1.45E-57 | -1.69E-46 |
| MS.gene055401 | MS.gene38172 | 0.817331 | 3.49E-52 | -1.69E-46 |
| MS.gene055502 | MS.gene38172 | -0.851622 | 7.87E-61 | -1.69E-46 |
| MS.gene055577 | MS.gene38172 | -0.838129 | 3.45E-57 | -1.69E-46 |
| MS.gene055748 | MS.gene38172 | -0.806165 | 9.39E-50 | -1.69E-46 |
| MS.gene055750 | MS.gene38172 | -0.833655 | 4.71E-56 | -1.69E-46 |
| MS.gene055751 | MS.gene38172 | -0.815275 | 1.00E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene38172 | -0.838587 | 2.63E-57 | -1.69E-46 |
| MS.gene056224 | MS.gene38172 | 0.811053 | 8.49E-51 | -1.69E-46 |
| MS.gene056298 | MS.gene38172 | 0.824619 | 7.32E-54 | -1.69E-46 |
| MS.gene056310 | MS.gene38172 | 0.899264 | 2.35E-77 | -1.69E-46 |
| MS.gene056311 | MS.gene38172 | 0.914689 | 1.43E-84 | -1.69E-46 |
| MS.gene056313 | MS.gene38172 | 0.902428 | 9.80E-79 | -1.69E-46 |
| MS.gene056408 | MS.gene38172 | 0.822191 | 2.70E-53 | -1.69E-46 |
| MS.gene056504 | MS.gene38172 | -0.863352 | 2.65E-64 | -1.69E-46 |
| MS.gene056510 | MS.gene38172 | -0.831744 | 1.40E-55 | -1.69E-46 |
| MS.gene056530 | MS.gene38172 | 0.814287 | 1.66E-51 | -1.69E-46 |
| MS.gene056550 | MS.gene38172 | 0.81682 | 4.54E-52 | -1.69E-46 |
| MS.gene056657 | MS.gene38172 | -0.832056 | 1.18E-55 | -1.69E-46 |
| MS.gene056692 | MS.gene38172 | -0.821006 | 5.08E-53 | -1.69E-46 |
| MS.gene056856 | MS.gene38172 | 0.801269 | 9.75E-49 | -1.69E-46 |
| MS.gene056878 | MS.gene38172 | -0.801586 | 8.40E-49 | -1.69E-46 |
| MS.gene057014 | MS.gene38172 | 0.874767 | 5.22E-68 | -1.69E-46 |
| MS.gene057473 | MS.gene38172 | 0.804459 | 2.14E-49 | -1.69E-46 |
| MS.gene057499 | MS.gene38172 | 0.827275 | 1.71E-54 | -1.69E-46 |
| MS.gene05787 | MS.gene38172 | -0.805102 | 1.57E-49 | -1.69E-46 |
| MS.gene058041 | MS.gene38172 | -0.816069 | 6.69E-52 | -1.69E-46 |
| MS.gene058068 | MS.gene38172 | 0.820266 | 7.51E-53 | -1.69E-46 |
| MS.gene058093 | MS.gene38172 | 0.813241 | 2.83E-51 | -1.69E-46 |
| MS.gene058099 | MS.gene38172 | 0.849679 | 2.77E-60 | -1.69E-46 |
| MS.gene058108 | MS.gene38172 | 0.865914 | 4.18E-65 | -1.69E-46 |
| MS.gene058109 | MS.gene38172 | 0.890375 | 1.04E-73 | -1.69E-46 |
| MS.gene058111 | MS.gene38172 | 0.877753 | 4.88E-69 | -1.69E-46 |
| MS.gene058117 | MS.gene38172 | 0.83348 | 5.21E-56 | -1.69E-46 |
| MS.gene058157 | MS.gene38172 | -0.853026 | 3.14E-61 | -1.69E-46 |
| MS.gene058170 | MS.gene38172 | 0.850858 | 1.29E-60 | -1.69E-46 |
| MS.gene058171 | MS.gene38172 | 0.91063 | 1.51E-82 | -1.69E-46 |
| MS.gene058172 | MS.gene38172 | 0.811097 | 8.30E-51 | -1.69E-46 |
| MS.gene058173 | MS.gene38172 | 0.913128 | 8.81E-84 | -1.69E-46 |
| MS.gene058174 | MS.gene38172 | 0.851284 | 9.81E-61 | -1.69E-46 |
| MS.gene058175 | MS.gene38172 | 0.91276 | 1.35E-83 | -1.69E-46 |
| MS.gene058179 | MS.gene38172 | 0.813983 | 1.94E-51 | -1.69E-46 |
| MS.gene058180 | MS.gene38172 | 0.826552 | 2.55E-54 | -1.69E-46 |
| MS.gene058268 | MS.gene38172 | 0.819403 | 1.18E-52 | -1.69E-46 |
| MS.gene058269 | MS.gene38172 | 0.816776 | 4.64E-52 | -1.69E-46 |
| MS.gene05837 | MS.gene38172 | -0.866511 | 2.70E-65 | -1.69E-46 |
| MS.gene058419 | MS.gene38172 | -0.824508 | 7.77E-54 | -1.69E-46 |
| MS.gene058493 | MS.gene38172 | 0.865881 | 4.28E-65 | -1.69E-46 |
| MS.gene058494 | MS.gene38172 | 0.851687 | 7.55E-61 | -1.69E-46 |
| MS.gene058496 | MS.gene38172 | 0.803429 | 3.50E-49 | -1.69E-46 |
| MS.gene058544 | MS.gene38172 | -0.803204 | 3.90E-49 | -1.69E-46 |
| MS.gene058628 | MS.gene38172 | 0.815086 | 1.11E-51 | -1.69E-46 |
| MS.gene058629 | MS.gene38172 | 0.810102 | 1.36E-50 | -1.69E-46 |
| MS.gene058630 | MS.gene38172 | 0.816995 | 4.15E-52 | -1.69E-46 |
| MS.gene058773 | MS.gene38172 | -0.826561 | 2.54E-54 | -1.69E-46 |
| MS.gene058840 | MS.gene38172 | 0.827419 | 1.58E-54 | -1.69E-46 |
| MS.gene05884 | MS.gene38172 | 0.830203 | 3.35E-55 | -1.69E-46 |
| MS.gene058978 | MS.gene38172 | 0.801519 | 8.67E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene38172 | -0.860477 | 2.01E-63 | -1.69E-46 |
| MS.gene059023 | MS.gene38172 | -0.804909 | 1.72E-49 | -1.69E-46 |
| MS.gene059037 | MS.gene38172 | 0.844787 | 6.09E-59 | -1.69E-46 |
| MS.gene059038 | MS.gene38172 | 0.802578 | 5.25E-49 | -1.69E-46 |
| MS.gene059045 | MS.gene38172 | 0.847241 | 1.31E-59 | -1.69E-46 |
| MS.gene059052 | MS.gene38172 | 0.821335 | 4.26E-53 | -1.69E-46 |
| MS.gene05913 | MS.gene38172 | -0.803578 | 3.26E-49 | -1.69E-46 |
| MS.gene059223 | MS.gene38172 | 0.852246 | 5.23E-61 | -1.69E-46 |
| MS.gene059236 | MS.gene38172 | 0.801417 | 9.09E-49 | -1.69E-46 |
| MS.gene059367 | MS.gene38172 | -0.851202 | 1.03E-60 | -1.69E-46 |
| MS.gene059677 | MS.gene38172 | -0.812493 | 4.12E-51 | -1.69E-46 |
| MS.gene059690 | MS.gene38172 | 0.830552 | 2.75E-55 | -1.69E-46 |
| MS.gene059691 | MS.gene38172 | 0.800762 | 1.24E-48 | -1.69E-46 |
| MS.gene059694 | MS.gene38172 | 0.82989 | 4.00E-55 | -1.69E-46 |
| MS.gene059697 | MS.gene38172 | 0.830122 | 3.51E-55 | -1.69E-46 |
| MS.gene059718 | MS.gene38172 | -0.82426 | 8.89E-54 | -1.69E-46 |
| MS.gene059801 | MS.gene38172 | -0.803665 | 3.13E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene38172 | -0.860046 | 2.71E-63 | -1.69E-46 |
| MS.gene059902 | MS.gene38172 | -0.804719 | 1.89E-49 | -1.69E-46 |
| MS.gene059916 | MS.gene38172 | 0.817819 | 2.71E-52 | -1.69E-46 |
| MS.gene059943 | MS.gene38172 | 0.833623 | 4.80E-56 | -1.69E-46 |
| MS.gene059944 | MS.gene38172 | 0.817593 | 3.04E-52 | -1.69E-46 |
| MS.gene06000 | MS.gene38172 | -0.802255 | 6.12E-49 | -1.69E-46 |
| MS.gene060187 | MS.gene38172 | 0.854019 | 1.63E-61 | -1.69E-46 |
| MS.gene060482 | MS.gene38172 | -0.847025 | 1.50E-59 | -1.69E-46 |
| MS.gene060593 | MS.gene38172 | 0.816511 | 5.32E-52 | -1.69E-46 |
| MS.gene060595 | MS.gene38172 | 0.855758 | 5.09E-62 | -1.69E-46 |
| MS.gene060602 | MS.gene38172 | 0.816426 | 5.56E-52 | -1.69E-46 |
| MS.gene060703 | MS.gene38172 | -0.81009 | 1.37E-50 | -1.69E-46 |
| MS.gene06074 | MS.gene38172 | 0.813794 | 2.14E-51 | -1.69E-46 |
| MS.gene060762 | MS.gene38172 | -0.82451 | 7.76E-54 | -1.69E-46 |
| MS.gene060778 | MS.gene38172 | -0.850366 | 1.78E-60 | -1.69E-46 |
| MS.gene06077 | MS.gene38172 | -0.88558 | 7.19E-72 | -1.69E-46 |
| MS.gene060808 | MS.gene38172 | 0.800335 | 1.51E-48 | -1.69E-46 |
| MS.gene060982 | MS.gene38172 | -0.830716 | 2.51E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene91446 | MS.gene38172 | PPI |
| MS.gene008793 | MS.gene38172 | PPI |
| MS.gene53169 | MS.gene38172 | PPI |
| MS.gene38172 | MS.gene93783 | PPI |
| MS.gene003638 | MS.gene38172 | PPI |
| MS.gene93058 | MS.gene38172 | PPI |
| MS.gene62620 | MS.gene38172 | PPI |
| MS.gene056488 | MS.gene38172 | PPI |
| MS.gene97981 | MS.gene38172 | PPI |
| MS.gene93783 | MS.gene38172 | PPI |
| MS.gene87111 | MS.gene38172 | PPI |
| MS.gene93059 | MS.gene38172 | PPI |
| MS.gene72560 | MS.gene38172 | PPI |
| MS.gene99693 | MS.gene38172 | PPI |
| MS.gene55382 | MS.gene38172 | PPI |
| MS.gene040151 | MS.gene38172 | PPI |
| MS.gene062932 | MS.gene38172 | PPI |
| MS.gene54933 | MS.gene38172 | PPI |
| MS.gene95889 | MS.gene38172 | PPI |
| MS.gene056487 | MS.gene38172 | PPI |
| MS.gene50700 | MS.gene38172 | PPI |
| MS.gene23359 | MS.gene38172 | PPI |
| MS.gene42146 | MS.gene38172 | PPI |
| MS.gene97980 | MS.gene38172 | PPI |
| MS.gene024362 | MS.gene38172 | PPI |
| MS.gene42873 | MS.gene38172 | PPI |
| MS.gene98697 | MS.gene38172 | PPI |
| MS.gene008794 | MS.gene38172 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38172.t1 | MTR_5g097900 | 97.756 | 312 | 7 | 0 | 1 | 312 | 1 | 312 | 0.0 | 630 |
| MS.gene38172.t1 | MTR_5g097910 | 97.436 | 312 | 8 | 0 | 1 | 312 | 1 | 312 | 0.0 | 629 |
| MS.gene38172.t1 | MTR_5g097940 | 97.436 | 312 | 8 | 0 | 1 | 312 | 1 | 312 | 0.0 | 629 |
| MS.gene38172.t1 | MTR_3g083130 | 68.506 | 308 | 96 | 1 | 6 | 312 | 7 | 314 | 1.44e-163 | 458 |
| MS.gene38172.t1 | MTR_0374s0050 | 62.951 | 305 | 110 | 3 | 1 | 302 | 1 | 305 | 6.68e-138 | 393 |
| MS.gene38172.t1 | MTR_4g072320 | 52.843 | 299 | 131 | 4 | 1 | 297 | 1 | 291 | 8.29e-103 | 304 |
| MS.gene38172.t1 | MTR_4g072350 | 51.485 | 303 | 135 | 5 | 20 | 311 | 17 | 318 | 4.80e-100 | 297 |
| MS.gene38172.t1 | MTR_4g072360 | 50.333 | 300 | 143 | 4 | 1 | 297 | 1 | 297 | 7.59e-100 | 296 |
| MS.gene38172.t1 | MTR_6g073110 | 50.165 | 303 | 145 | 4 | 1 | 300 | 1 | 300 | 2.45e-98 | 292 |
| MS.gene38172.t1 | MTR_8g070095 | 42.958 | 284 | 159 | 2 | 19 | 300 | 15 | 297 | 8.28e-76 | 235 |
| MS.gene38172.t1 | MTR_4g036845 | 41.404 | 285 | 162 | 4 | 18 | 300 | 12 | 293 | 1.00e-72 | 227 |
| MS.gene38172.t1 | MTR_7g063580 | 43.015 | 272 | 143 | 3 | 49 | 311 | 83 | 351 | 1.17e-70 | 223 |
| MS.gene38172.t1 | MTR_8g070115 | 43.056 | 288 | 153 | 4 | 19 | 302 | 15 | 295 | 1.45e-70 | 221 |
| MS.gene38172.t1 | MTR_4g021350 | 42.761 | 297 | 153 | 6 | 19 | 310 | 15 | 299 | 4.00e-66 | 210 |
| MS.gene38172.t1 | MTR_4g021350 | 43.060 | 281 | 145 | 5 | 19 | 294 | 15 | 285 | 7.12e-64 | 203 |
| MS.gene38172.t1 | MTR_4g021410 | 41.311 | 305 | 151 | 6 | 19 | 312 | 16 | 303 | 5.55e-63 | 202 |
| MS.gene38172.t1 | MTR_4g021410 | 42.125 | 273 | 138 | 4 | 48 | 312 | 6 | 266 | 1.55e-59 | 191 |
| MS.gene38172.t1 | MTR_4g072060 | 39.088 | 307 | 172 | 6 | 15 | 310 | 6 | 308 | 1.73e-59 | 193 |
| MS.gene38172.t1 | MTR_4g021450 | 41.844 | 282 | 150 | 3 | 19 | 300 | 16 | 283 | 2.58e-59 | 192 |
| MS.gene38172.t1 | MTR_7g070500 | 38.214 | 280 | 165 | 5 | 20 | 298 | 23 | 295 | 9.39e-59 | 191 |
| MS.gene38172.t1 | MTR_7g070500 | 38.686 | 274 | 160 | 5 | 20 | 292 | 23 | 289 | 3.47e-58 | 189 |
| MS.gene38172.t1 | MTR_4g021410 | 41.423 | 239 | 120 | 4 | 82 | 312 | 1 | 227 | 4.05e-46 | 155 |
| MS.gene38172.t1 | MTR_4g021450 | 42.466 | 219 | 114 | 2 | 82 | 300 | 1 | 207 | 2.29e-43 | 149 |
| MS.gene38172.t1 | MTR_4g021450 | 42.405 | 158 | 88 | 1 | 143 | 300 | 10 | 164 | 2.47e-37 | 132 |
| MS.gene38172.t1 | MTR_6g072650 | 44.218 | 147 | 46 | 5 | 176 | 311 | 13 | 134 | 2.72e-27 | 103 |
| MS.gene38172.t1 | MTR_6g072710 | 46.018 | 113 | 56 | 2 | 191 | 300 | 1 | 111 | 7.13e-26 | 99.8 |
| MS.gene38172.t1 | MTR_3g449790 | 26.316 | 323 | 160 | 12 | 15 | 285 | 42 | 338 | 1.10e-17 | 82.8 |
| MS.gene38172.t1 | MTR_3g449790 | 25.836 | 329 | 160 | 13 | 15 | 285 | 42 | 344 | 2.22e-16 | 79.3 |
| MS.gene38172.t1 | MTR_7g114990 | 24.913 | 289 | 153 | 11 | 41 | 290 | 52 | 315 | 1.17e-12 | 68.2 |
| MS.gene38172.t1 | MTR_7g021850 | 25.087 | 287 | 161 | 9 | 41 | 292 | 43 | 310 | 7.88e-12 | 65.5 |
| MS.gene38172.t1 | MTR_1g102750 | 22.977 | 309 | 169 | 10 | 24 | 290 | 29 | 310 | 9.04e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38172.t1 | AT1G59960 | 53.571 | 308 | 132 | 6 | 1 | 300 | 1 | 305 | 4.29e-113 | 330 |
| MS.gene38172.t1 | AT1G59950 | 55.903 | 288 | 117 | 5 | 20 | 300 | 15 | 299 | 4.98e-106 | 312 |
| MS.gene38172.t1 | AT2G37770 | 44.755 | 286 | 147 | 4 | 19 | 300 | 15 | 293 | 1.76e-78 | 242 |
| MS.gene38172.t1 | AT2G37790 | 43.007 | 286 | 152 | 4 | 19 | 300 | 15 | 293 | 2.08e-76 | 236 |
| MS.gene38172.t1 | AT5G62420 | 44.014 | 284 | 153 | 4 | 20 | 300 | 14 | 294 | 1.15e-74 | 232 |
| MS.gene38172.t1 | AT5G01670 | 42.254 | 284 | 155 | 6 | 19 | 300 | 23 | 299 | 8.87e-73 | 227 |
| MS.gene38172.t1 | AT2G37760 | 43.310 | 284 | 148 | 4 | 19 | 299 | 15 | 288 | 3.17e-72 | 225 |
| MS.gene38172.t1 | AT2G37760 | 43.310 | 284 | 148 | 4 | 19 | 299 | 15 | 288 | 3.17e-72 | 225 |
| MS.gene38172.t1 | AT2G37760 | 43.772 | 281 | 145 | 4 | 19 | 296 | 15 | 285 | 2.91e-71 | 223 |
| MS.gene38172.t1 | AT2G37760 | 43.110 | 283 | 148 | 4 | 19 | 298 | 15 | 287 | 2.24e-70 | 221 |
| MS.gene38172.t1 | AT2G37760 | 43.110 | 283 | 148 | 4 | 19 | 298 | 15 | 287 | 2.24e-70 | 221 |
| MS.gene38172.t1 | AT3G53880 | 41.696 | 283 | 160 | 3 | 19 | 300 | 15 | 293 | 1.06e-69 | 219 |
| MS.gene38172.t1 | AT2G21260 | 39.041 | 292 | 163 | 6 | 15 | 295 | 6 | 293 | 2.35e-67 | 213 |
| MS.gene38172.t1 | AT3G53880 | 41.786 | 280 | 152 | 4 | 19 | 294 | 15 | 287 | 2.84e-67 | 213 |
| MS.gene38172.t1 | AT5G01670 | 38.585 | 311 | 155 | 7 | 19 | 300 | 23 | 326 | 8.45e-67 | 213 |
| MS.gene38172.t1 | AT2G21250 | 37.785 | 307 | 176 | 6 | 15 | 310 | 6 | 308 | 5.44e-66 | 209 |
| MS.gene38172.t1 | AT2G37760 | 42.917 | 240 | 130 | 3 | 62 | 298 | 6 | 241 | 8.35e-58 | 187 |
| MS.gene38172.t1 | AT2G37760 | 42.917 | 240 | 130 | 3 | 62 | 298 | 6 | 241 | 8.35e-58 | 187 |
| MS.gene38172.t1 | AT2G37770 | 47.716 | 197 | 93 | 3 | 19 | 212 | 15 | 204 | 1.60e-54 | 179 |
| MS.gene38172.t1 | AT2G21250 | 41.905 | 210 | 111 | 5 | 15 | 217 | 6 | 211 | 3.39e-48 | 161 |
| MS.gene38172.t1 | AT2G21260 | 35.000 | 220 | 130 | 5 | 87 | 295 | 8 | 225 | 2.09e-41 | 144 |
| MS.gene38172.t1 | AT1G06690 | 26.990 | 289 | 155 | 9 | 35 | 285 | 85 | 355 | 2.36e-19 | 87.8 |
| MS.gene38172.t1 | AT5G53580 | 24.648 | 284 | 159 | 10 | 44 | 289 | 80 | 346 | 5.00e-15 | 75.1 |
| MS.gene38172.t1 | AT1G60680 | 27.532 | 316 | 162 | 16 | 15 | 285 | 14 | 307 | 3.49e-14 | 72.8 |
| MS.gene38172.t1 | AT1G60750 | 25.887 | 282 | 159 | 12 | 44 | 300 | 50 | 306 | 1.67e-11 | 64.7 |
| MS.gene38172.t1 | AT1G60690 | 24.921 | 317 | 175 | 13 | 25 | 300 | 27 | 321 | 5.72e-11 | 63.2 |
Find 66 sgRNAs with CRISPR-Local
Find 82 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCAAAGATACGTAAATTT+TGG | 0.162109 | 5.3:-79227902 | None:intergenic |
| ATTGGAAATGAAAACTTTCC+AGG | 0.287256 | 5.3:-79227361 | None:intergenic |
| TGCTTGCACCTTTCCTCAAC+GGG | 0.292412 | 5.3:-79227734 | None:intergenic |
| TCTTTCTTACATGTGAAGTC+TGG | 0.294929 | 5.3:-79226849 | None:intergenic |
| TGGACTTGTATTTGATTCAT+TGG | 0.320809 | 5.3:+79227323 | MS.gene38172:CDS |
| GTGTCTATAACCTTGTTTGA+TGG | 0.333209 | 5.3:-79226895 | None:intergenic |
| TCATTCTCCATAACTTCATT+TGG | 0.362803 | 5.3:-79227762 | None:intergenic |
| CATTTGATGTGAAAGGTGTT+TGG | 0.370719 | 5.3:+79227404 | MS.gene38172:CDS |
| AAAATTTACGTATCTTTGAT+TGG | 0.375055 | 5.3:+79227904 | MS.gene38172:CDS |
| CTTGGACTCACTAAAGCTAT+TGG | 0.375778 | 5.3:+79227451 | MS.gene38172:CDS |
| CAAACACCTTTCACATCAAA+TGG | 0.381803 | 5.3:-79227403 | None:intergenic |
| AGTCCGGGCTTGGTTGGTCC+AGG | 0.391423 | 5.3:-79227984 | None:intergenic |
| TTTGATACTGCTGCTGCATA+TGG | 0.396016 | 5.3:+79226918 | MS.gene38172:CDS |
| CTTTCTTACATGTGAAGTCT+GGG | 0.403596 | 5.3:-79226848 | None:intergenic |
| ATCATAGAGGTCATTGAGTC+CGG | 0.411816 | 5.3:-79228000 | None:intergenic |
| AAGAGATCTGCCACATCAAT+TGG | 0.421446 | 5.3:-79227379 | None:intergenic |
| TTGAAAGAGGCAATTGAACT+TGG | 0.422526 | 5.3:+79226966 | MS.gene38172:CDS |
| ATTTGATGTGAAAGGTGTTT+GGG | 0.426961 | 5.3:+79227405 | MS.gene38172:CDS |
| TCTCTCCTTATCATAGCTCT+TGG | 0.432328 | 5.3:-79227874 | None:intergenic |
| TGTTCCCAAGAGCTATGATA+AGG | 0.434816 | 5.3:+79227869 | MS.gene38172:CDS |
| CTCTCCTTATCATAGCTCTT+GGG | 0.442349 | 5.3:-79227873 | None:intergenic |
| GAGGTCATTGAGTCCGGGCT+TGG | 0.446240 | 5.3:-79227994 | None:intergenic |
| CAGGGGACCAAATGAAGTTA+TGG | 0.449659 | 5.3:+79227755 | MS.gene38172:CDS |
| AAGCAAAATCGTTTGATCCC+TGG | 0.455139 | 5.3:+79227966 | MS.gene38172:CDS |
| CGTTGAGGAAAGGTGCAAGC+AGG | 0.464952 | 5.3:+79227736 | MS.gene38172:CDS |
| AAAGTTTAGAAGTAACAAAA+AGG | 0.467615 | 5.3:-79227007 | None:intergenic |
| GACTCTTCAACTAGACTACT+TGG | 0.469433 | 5.3:+79227303 | MS.gene38172:CDS |
| CTGCTTGCACCTTTCCTCAA+CGG | 0.474588 | 5.3:-79227735 | None:intergenic |
| ATCCCTGGACCAACCAAGCC+CGG | 0.482612 | 5.3:+79227981 | MS.gene38172:CDS |
| AAGTTTCAAGCTTTCCTCCA+TGG | 0.483539 | 5.3:-79227431 | None:intergenic |
| TATGGCTCAGAACAAGCTCT+TGG | 0.491850 | 5.3:+79226936 | MS.gene38172:CDS |
| ATGGAGGAAAGCTTGAAACT+TGG | 0.498400 | 5.3:+79227433 | MS.gene38172:CDS |
| TTGCACAAATATCTCTAAGA+TGG | 0.499975 | 5.3:+79227823 | MS.gene38172:CDS |
| TCTTGGAGAGGCTTTGAAAG+AGG | 0.506147 | 5.3:+79226953 | MS.gene38172:CDS |
| GTGTTTGTAAGAACCTTTGT+TGG | 0.534052 | 5.3:-79226783 | None:intergenic |
| GAAGATGCCTGTGGTTGGAA+TGG | 0.535658 | 5.3:+79226818 | MS.gene38172:CDS |
| GTCCGGGCTTGGTTGGTCCA+GGG | 0.541777 | 5.3:-79227983 | None:intergenic |
| TCATTGAGTCCGGGCTTGGT+TGG | 0.547327 | 5.3:-79227990 | None:intergenic |
| GTTGAGGAAAGGTGCAAGCA+GGG | 0.550606 | 5.3:+79227737 | MS.gene38172:CDS |
| TCTATATTTAGTCATCATAG+AGG | 0.553846 | 5.3:-79228013 | None:intergenic |
| AAGATGCCTGTGGTTGGAAT+GGG | 0.555328 | 5.3:+79226819 | MS.gene38172:CDS |
| CTTTGATTGGTCATTGACAA+AGG | 0.559604 | 5.3:+79227917 | MS.gene38172:CDS |
| TCATAGAGGTCATTGAGTCC+GGG | 0.574712 | 5.3:-79227999 | None:intergenic |
| GCTGATCCCATTCCAACCAC+AGG | 0.583865 | 5.3:-79226825 | None:intergenic |
| AGGTGGAGATGAACCTTGCA+TGG | 0.584406 | 5.3:+79227652 | MS.gene38172:intron |
| ATCATTGAAGCCATCAAACA+AGG | 0.587661 | 5.3:+79226885 | MS.gene38172:CDS |
| GAAAGGTGTTTGGGAATCCA+TGG | 0.587744 | 5.3:+79227414 | MS.gene38172:CDS |
| CTAAGATGGCTATATGAACA+AGG | 0.588672 | 5.3:+79227837 | MS.gene38172:CDS |
| TAGTGTTGAAATTCCAACAA+AGG | 0.595790 | 5.3:+79226770 | MS.gene38172:CDS |
| TGAATTACTTGATTGACTGC+AGG | 0.596137 | 5.3:-79227532 | None:intergenic |
| TGGCCACTTAGCTCTCAACC+TGG | 0.616515 | 5.3:+79227343 | MS.gene38172:CDS |
| CAATTGAAGATGCCTGTGGT+TGG | 0.621459 | 5.3:+79226813 | MS.gene38172:CDS |
| AGAGCAGGAATAACAAGATG+AGG | 0.624425 | 5.3:-79227047 | None:intergenic |
| TTGAGGAAAGGTGCAAGCAG+GGG | 0.624444 | 5.3:+79227738 | MS.gene38172:CDS |
| CAGGAATAACAAGATGAGGA+TGG | 0.629084 | 5.3:-79227043 | None:intergenic |
| TTTCCAGGTTGAGAGCTAAG+TGG | 0.629737 | 5.3:-79227346 | None:intergenic |
| TTTCCTCAACGGGGAAAATG+CGG | 0.632608 | 5.3:-79227724 | None:intergenic |
| AAAGAGATTGCAGATGCACA+TGG | 0.633321 | 5.3:+79227792 | MS.gene38172:CDS |
| CTCAGAACAAGCTCTTGGAG+AGG | 0.635937 | 5.3:+79226941 | MS.gene38172:CDS |
| TTTCTTACATGTGAAGTCTG+GGG | 0.640753 | 5.3:-79226847 | None:intergenic |
| CTCTTGCCATTTGATGTGAA+AGG | 0.649522 | 5.3:+79227397 | MS.gene38172:CDS |
| TGATTGGTCATTGACAAAGG+AGG | 0.655967 | 5.3:+79227920 | MS.gene38172:CDS |
| ATTGACTGCAGGAAGAACAG+TGG | 0.718468 | 5.3:-79227521 | None:intergenic |
| AGGTGTTTGGGAATCCATGG+AGG | 0.719619 | 5.3:+79227417 | MS.gene38172:CDS |
| GCTTGCACCTTTCCTCAACG+GGG | 0.723595 | 5.3:-79227733 | None:intergenic |
| TAGTCAATTGAAGATGCCTG+TGG | 0.737799 | 5.3:+79226809 | MS.gene38172:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTTACGTATCTTTGAT+TGG | + | chr5.3:79227904-79227923 | MS.gene38172:CDS | 20.0% |
| !! | AAAGTTTAGAAGTAACAAAA+AGG | - | chr5.3:79227010-79227029 | None:intergenic | 20.0% |
| !!! | AATCAAAGATACGTAAATTT+TGG | - | chr5.3:79227905-79227924 | None:intergenic | 20.0% |
| !!! | GTTTAAGTTAATCAAAACTT+AGG | - | chr5.3:79227567-79227586 | None:intergenic | 20.0% |
| !!! | TTTTGTTACTTCTAAACTTT+GGG | + | chr5.3:79227010-79227029 | MS.gene38172:CDS | 20.0% |
| !!! | TTTTTGTTACTTCTAAACTT+TGG | + | chr5.3:79227009-79227028 | MS.gene38172:CDS | 20.0% |
| ! | AAGTATGCTTAGATGATATT+TGG | + | chr5.3:79227115-79227134 | MS.gene38172:intron | 25.0% |
| ! | AATCTCAATAAGTGTATGTT+TGG | - | chr5.3:79227257-79227276 | None:intergenic | 25.0% |
| ! | TACACTTATTGAGATTAAAC+TGG | + | chr5.3:79227261-79227280 | MS.gene38172:intron | 25.0% |
| !!! | ATTCACTTTTGTTTACATGA+AGG | - | chr5.3:79227234-79227253 | None:intergenic | 25.0% |
| !!! | TTAGATGATATTTGGTTCTA+AGG | + | chr5.3:79227123-79227142 | MS.gene38172:intron | 25.0% |
| ATTGGAAATGAAAACTTTCC+AGG | - | chr5.3:79227364-79227383 | None:intergenic | 30.0% | |
| CGAACTCATATATTTATAGG+TGG | + | chr5.3:79227635-79227654 | MS.gene38172:intron | 30.0% | |
| CGACGAACTCATATATTTAT+AGG | + | chr5.3:79227632-79227651 | MS.gene38172:intron | 30.0% | |
| TCATTCTCCATAACTTCATT+TGG | - | chr5.3:79227765-79227784 | None:intergenic | 30.0% | |
| TGGACTTGTATTTGATTCAT+TGG | + | chr5.3:79227323-79227342 | MS.gene38172:CDS | 30.0% | |
| ! | GTTTTCATTTCCAATTGATG+TGG | + | chr5.3:79227369-79227388 | MS.gene38172:CDS | 30.0% |
| ! | TAGTGTTGAAATTCCAACAA+AGG | + | chr5.3:79226770-79226789 | MS.gene38172:CDS | 30.0% |
| ! | TTGCACAAATATCTCTAAGA+TGG | + | chr5.3:79227823-79227842 | MS.gene38172:CDS | 30.0% |
| !! | ATTTGATGTGAAAGGTGTTT+GGG | + | chr5.3:79227405-79227424 | MS.gene38172:CDS | 30.0% |
| ATCATTGAAGCCATCAAACA+AGG | + | chr5.3:79226885-79226904 | MS.gene38172:CDS | 35.0% | |
| CAAACACCTTTCACATCAAA+TGG | - | chr5.3:79227406-79227425 | None:intergenic | 35.0% | |
| CTAAGATGGCTATATGAACA+AGG | + | chr5.3:79227837-79227856 | MS.gene38172:CDS | 35.0% | |
| CTTTCTTACATGTGAAGTCT+GGG | - | chr5.3:79226851-79226870 | None:intergenic | 35.0% | |
| GTGTTTGTAAGAACCTTTGT+TGG | - | chr5.3:79226786-79226805 | None:intergenic | 35.0% | |
| TCTTTCTTACATGTGAAGTC+TGG | - | chr5.3:79226852-79226871 | None:intergenic | 35.0% | |
| TGAATTACTTGATTGACTGC+AGG | - | chr5.3:79227535-79227554 | None:intergenic | 35.0% | |
| TTGAAAGAGGCAATTGAACT+TGG | + | chr5.3:79226966-79226985 | MS.gene38172:CDS | 35.0% | |
| TTTCTTACATGTGAAGTCTG+GGG | - | chr5.3:79226850-79226869 | None:intergenic | 35.0% | |
| ! | CTTTGATTGGTCATTGACAA+AGG | + | chr5.3:79227917-79227936 | MS.gene38172:CDS | 35.0% |
| ! | GTGTCTATAACCTTGTTTGA+TGG | - | chr5.3:79226898-79226917 | None:intergenic | 35.0% |
| !! | CATTTGATGTGAAAGGTGTT+TGG | + | chr5.3:79227404-79227423 | MS.gene38172:CDS | 35.0% |
| !! | TTGAGAGATTTTTGAAGAGC+AGG | - | chr5.3:79227065-79227084 | None:intergenic | 35.0% |
| AAAGAGATTGCAGATGCACA+TGG | + | chr5.3:79227792-79227811 | MS.gene38172:CDS | 40.0% | |
| AAGAGATCTGCCACATCAAT+TGG | - | chr5.3:79227382-79227401 | None:intergenic | 40.0% | |
| AAGCAAAATCGTTTGATCCC+TGG | + | chr5.3:79227966-79227985 | MS.gene38172:CDS | 40.0% | |
| AAGTTTCAAGCTTTCCTCCA+TGG | - | chr5.3:79227434-79227453 | None:intergenic | 40.0% | |
| AGAGCAGGAATAACAAGATG+AGG | - | chr5.3:79227050-79227069 | None:intergenic | 40.0% | |
| ATCATAGAGGTCATTGAGTC+CGG | - | chr5.3:79228003-79228022 | None:intergenic | 40.0% | |
| ATGGAGGAAAGCTTGAAACT+TGG | + | chr5.3:79227433-79227452 | MS.gene38172:CDS | 40.0% | |
| CAGGAATAACAAGATGAGGA+TGG | - | chr5.3:79227046-79227065 | None:intergenic | 40.0% | |
| CTCTCCTTATCATAGCTCTT+GGG | - | chr5.3:79227876-79227895 | None:intergenic | 40.0% | |
| CTTGGACTCACTAAAGCTAT+TGG | + | chr5.3:79227451-79227470 | MS.gene38172:CDS | 40.0% | |
| GACTCTTCAACTAGACTACT+TGG | + | chr5.3:79227303-79227322 | MS.gene38172:CDS | 40.0% | |
| TAGTCAATTGAAGATGCCTG+TGG | + | chr5.3:79226809-79226828 | MS.gene38172:CDS | 40.0% | |
| TCTCTCCTTATCATAGCTCT+TGG | - | chr5.3:79227877-79227896 | None:intergenic | 40.0% | |
| TGTTCCCAAGAGCTATGATA+AGG | + | chr5.3:79227869-79227888 | MS.gene38172:CDS | 40.0% | |
| TTTGATACTGCTGCTGCATA+TGG | + | chr5.3:79226918-79226937 | MS.gene38172:CDS | 40.0% | |
| ! | AGAGAGTTTTGCAATGCACA+CGG | + | chr5.3:79227690-79227709 | MS.gene38172:CDS | 40.0% |
| ! | CTCTTGCCATTTGATGTGAA+AGG | + | chr5.3:79227397-79227416 | MS.gene38172:CDS | 40.0% |
| ! | TGATTGGTCATTGACAAAGG+AGG | + | chr5.3:79227920-79227939 | MS.gene38172:CDS | 40.0% |
| !! | TGGATTTGTTGATTTCGTGC+AGG | + | chr5.3:79227281-79227300 | MS.gene38172:intron | 40.0% |
| AAGATGCCTGTGGTTGGAAT+GGG | + | chr5.3:79226819-79226838 | MS.gene38172:CDS | 45.0% | |
| ATTGACTGCAGGAAGAACAG+TGG | - | chr5.3:79227524-79227543 | None:intergenic | 45.0% | |
| CAATTGAAGATGCCTGTGGT+TGG | + | chr5.3:79226813-79226832 | MS.gene38172:CDS | 45.0% | |
| CAGGGGACCAAATGAAGTTA+TGG | + | chr5.3:79227755-79227774 | MS.gene38172:CDS | 45.0% | |
| TATGGCTCAGAACAAGCTCT+TGG | + | chr5.3:79226936-79226955 | MS.gene38172:CDS | 45.0% | |
| TCATAGAGGTCATTGAGTCC+GGG | - | chr5.3:79228002-79228021 | None:intergenic | 45.0% | |
| TTTCCTCAACGGGGAAAATG+CGG | - | chr5.3:79227727-79227746 | None:intergenic | 45.0% | |
| ! | GCTTCTTTTGTTGCCATGCA+AGG | - | chr5.3:79227668-79227687 | None:intergenic | 45.0% |
| ! | TTTCCAGGTTGAGAGCTAAG+TGG | - | chr5.3:79227349-79227368 | None:intergenic | 45.0% |
| !! | GAAAGGTGTTTGGGAATCCA+TGG | + | chr5.3:79227414-79227433 | MS.gene38172:CDS | 45.0% |
| !! | TCTTGGAGAGGCTTTGAAAG+AGG | + | chr5.3:79226953-79226972 | MS.gene38172:CDS | 45.0% |
| AGGTGGAGATGAACCTTGCA+TGG | + | chr5.3:79227652-79227671 | MS.gene38172:intron | 50.0% | |
| AGGTGTTTGGGAATCCATGG+AGG | + | chr5.3:79227417-79227436 | MS.gene38172:CDS | 50.0% | |
| CTCAGAACAAGCTCTTGGAG+AGG | + | chr5.3:79226941-79226960 | MS.gene38172:CDS | 50.0% | |
| CTGCTTGCACCTTTCCTCAA+CGG | - | chr5.3:79227738-79227757 | None:intergenic | 50.0% | |
| GAAGATGCCTGTGGTTGGAA+TGG | + | chr5.3:79226818-79226837 | MS.gene38172:CDS | 50.0% | |
| TGCTTGCACCTTTCCTCAAC+GGG | - | chr5.3:79227737-79227756 | None:intergenic | 50.0% | |
| ! | GCATTTTCCCCGTTGAGGAA+AGG | + | chr5.3:79227726-79227745 | MS.gene38172:CDS | 50.0% |
| ! | GTTGAGGAAAGGTGCAAGCA+GGG | + | chr5.3:79227737-79227756 | MS.gene38172:CDS | 50.0% |
| ! | TAACCGCATTTTCCCCGTTG+AGG | + | chr5.3:79227721-79227740 | MS.gene38172:CDS | 50.0% |
| ! | TTGAGGAAAGGTGCAAGCAG+GGG | + | chr5.3:79227738-79227757 | MS.gene38172:CDS | 50.0% |
| GCTGATCCCATTCCAACCAC+AGG | - | chr5.3:79226828-79226847 | None:intergenic | 55.0% | |
| GCTTGCACCTTTCCTCAACG+GGG | - | chr5.3:79227736-79227755 | None:intergenic | 55.0% | |
| ! | CGTTGAGGAAAGGTGCAAGC+AGG | + | chr5.3:79227736-79227755 | MS.gene38172:CDS | 55.0% |
| ! | TCATTGAGTCCGGGCTTGGT+TGG | - | chr5.3:79227993-79228012 | None:intergenic | 55.0% |
| ! | TGGCCACTTAGCTCTCAACC+TGG | + | chr5.3:79227343-79227362 | MS.gene38172:CDS | 55.0% |
| ATCCCTGGACCAACCAAGCC+CGG | + | chr5.3:79227981-79228000 | MS.gene38172:CDS | 60.0% | |
| GAGGTCATTGAGTCCGGGCT+TGG | - | chr5.3:79227997-79228016 | None:intergenic | 60.0% | |
| ! | AGTCCGGGCTTGGTTGGTCC+AGG | - | chr5.3:79227987-79228006 | None:intergenic | 65.0% |
| ! | GTCCGGGCTTGGTTGGTCCA+GGG | - | chr5.3:79227986-79228005 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 79226765 | 79228028 | 79226765 | ID=MS.gene38172 |
| chr5.3 | mRNA | 79226765 | 79228028 | 79226765 | ID=MS.gene38172.t1;Parent=MS.gene38172 |
| chr5.3 | exon | 79226765 | 79227084 | 79226765 | ID=MS.gene38172.t1.exon1;Parent=MS.gene38172.t1 |
| chr5.3 | CDS | 79226765 | 79227084 | 79226765 | ID=cds.MS.gene38172.t1;Parent=MS.gene38172.t1 |
| chr5.3 | exon | 79227303 | 79227546 | 79227303 | ID=MS.gene38172.t1.exon2;Parent=MS.gene38172.t1 |
| chr5.3 | CDS | 79227303 | 79227546 | 79227303 | ID=cds.MS.gene38172.t1;Parent=MS.gene38172.t1 |
| chr5.3 | exon | 79227654 | 79228028 | 79227654 | ID=MS.gene38172.t1.exon3;Parent=MS.gene38172.t1 |
| chr5.3 | CDS | 79227654 | 79228028 | 79227654 | ID=cds.MS.gene38172.t1;Parent=MS.gene38172.t1 |
| Gene Sequence |
| Protein sequence |
