AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene67744

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene67744.t1 MTR_3g007240 98.186 1213 22 0 1 1213 1 1213 0.0 2476
MS.gene67744.t1 MTR_3g007240 96.976 926 27 1 1 925 1 926 0.0 1862
MS.gene67744.t1 MTR_8g044210 76.081 1179 261 6 50 1211 1 1175 0.0 1801
MS.gene67744.t1 MTR_7g073480 57.546 1133 424 8 115 1192 137 1267 0.0 1311
MS.gene67744.t1 MTR_5g037210 36.786 1120 639 21 121 1189 24 1125 0.0 716
MS.gene67744.t1 MTR_4g112430 36.719 1073 603 16 120 1133 38 1093 0.0 685
MS.gene67744.t1 MTR_2g099690 35.264 1157 653 19 120 1199 40 1177 0.0 684
MS.gene67744.t1 MTR_6g006910 36.460 1130 632 24 120 1178 37 1151 0.0 669
MS.gene67744.t1 MTR_8g069920 35.393 1133 660 19 137 1208 67 1188 0.0 668
MS.gene67744.t1 MTR_3g037330 36.126 1110 648 17 120 1178 35 1134 0.0 653
MS.gene67744.t1 MTR_0021s0360 35.631 1117 647 19 120 1178 33 1135 0.0 650
MS.gene67744.t1 MTR_3g037330 35.902 1064 623 16 165 1178 10 1064 0.0 612
MS.gene67744.t1 MTR_2g090610 33.088 1088 648 21 121 1190 3 1028 1.15e-180 561
MS.gene67744.t1 MTR_2g099690 37.868 882 466 16 120 935 40 905 4.42e-175 540
MS.gene67744.t1 MTR_2g090610 34.139 993 580 20 121 1095 3 939 1.36e-171 533
MS.gene67744.t1 MTR_2g099690 36.246 847 458 15 120 900 40 870 6.71e-156 489
MS.gene67744.t1 MTR_8g018290 35.464 829 452 18 443 1199 14 831 5.58e-155 487
MS.gene67744.t1 MTR_8g018290 35.132 834 455 16 443 1199 14 838 2.87e-153 483
MS.gene67744.t1 MTR_8g062150 35.169 563 321 12 121 660 44 585 1.40e-93 313
MS.gene67744.t1 MTR_8g005730 37.059 170 84 4 603 772 17 163 1.45e-28 114
MS.gene67744.t1 MTR_8g005740 29.555 247 76 5 666 872 1 189 1.34e-18 85.9
MS.gene67744.t1 MTR_4g008650 23.429 525 262 15 421 934 380 775 8.31e-18 90.1
MS.gene67744.t1 MTR_4g008650 23.429 525 262 16 421 934 380 775 1.83e-17 88.6
MS.gene67744.t1 MTR_8g090125 22.925 506 256 14 440 934 351 733 1.98e-17 88.6
MS.gene67744.t1 MTR_8g027160 25.047 531 286 17 491 986 352 805 3.99e-17 87.8
MS.gene67744.t1 MTR_8g027160 25.047 531 286 17 491 986 352 805 5.64e-17 87.4
MS.gene67744.t1 MTR_8g027160 25.105 478 249 15 491 934 352 754 5.56e-16 84.0
MS.gene67744.t1 MTR_8g027160 25.105 478 249 15 491 934 352 754 6.58e-16 83.6
MS.gene67744.t1 MTR_2g056040 46.667 75 39 1 752 825 1 75 6.90e-15 71.6
MS.gene67744.t1 MTR_4g043690 22.790 509 251 17 443 934 399 782 5.80e-14 77.4
MS.gene67744.t1 MTR_0005s0140 22.593 509 252 17 443 934 314 697 9.34e-14 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene67744.t1 AT5G04930 69.496 1131 329 10 73 1197 26 1146 0.0 1660
MS.gene67744.t1 AT1G59820 35.945 1174 664 25 88 1203 3 1146 0.0 715
MS.gene67744.t1 AT3G27870 36.641 1149 651 20 120 1207 37 1169 0.0 712
MS.gene67744.t1 AT1G68710 36.143 1115 647 19 120 1178 41 1146 0.0 693
MS.gene67744.t1 AT1G68710 36.143 1115 647 19 120 1178 41 1146 0.0 693
MS.gene67744.t1 AT3G25610 37.332 1117 628 22 120 1178 39 1141 0.0 691
MS.gene67744.t1 AT3G13900 36.340 1153 634 25 121 1191 41 1175 0.0 691
MS.gene67744.t1 AT1G26130 35.696 1157 666 21 120 1212 41 1183 0.0 690
MS.gene67744.t1 AT1G26130 35.696 1157 666 21 120 1212 41 1183 0.0 690
MS.gene67744.t1 AT1G26130 35.696 1157 666 21 120 1212 41 1183 0.0 690
MS.gene67744.t1 AT1G26130 35.628 1162 659 21 120 1212 41 1182 0.0 689
MS.gene67744.t1 AT1G54280 35.931 1155 638 20 121 1191 41 1177 0.0 689
MS.gene67744.t1 AT1G54280 35.931 1155 638 20 121 1191 41 1177 0.0 689
MS.gene67744.t1 AT1G54280 35.931 1155 638 20 121 1191 41 1177 0.0 689
MS.gene67744.t1 AT1G17500 35.428 1146 656 24 120 1202 40 1164 0.0 683
MS.gene67744.t1 AT1G17500 35.428 1146 656 24 120 1202 40 1164 0.0 683
MS.gene67744.t1 AT1G68710 35.320 1141 647 20 120 1178 41 1172 0.0 679
MS.gene67744.t1 AT1G72700 34.545 1155 666 20 120 1202 40 1176 0.0 673
MS.gene67744.t1 AT1G72700 34.545 1155 666 20 120 1202 40 1176 0.0 673
MS.gene67744.t1 AT1G72700 34.545 1155 666 20 120 1202 40 1176 0.0 673
MS.gene67744.t1 AT1G13210 35.613 1126 648 22 120 1183 37 1147 0.0 664
MS.gene67744.t1 AT3G27870 39.171 965 522 16 120 1034 37 986 0.0 660
MS.gene67744.t1 AT3G13900 38.948 932 480 22 121 979 41 956 0.0 604
MS.gene67744.t1 AT3G27870 35.750 993 563 18 275 1207 1 978 0.0 584
MS.gene67744.t1 AT3G13900 37.446 924 482 23 121 975 41 937 7.90e-179 553
MS.gene67744.t1 AT5G44240 32.887 1119 662 24 121 1213 3 1058 2.78e-178 555
MS.gene67744.t1 AT5G44240 32.887 1119 662 24 121 1213 35 1090 1.41e-177 554
MS.gene67744.t1 AT1G07670 23.086 810 455 35 209 986 132 805 9.14e-15 80.1
MS.gene67744.t1 AT1G07670 23.086 810 455 35 209 986 132 805 9.14e-15 80.1
MS.gene67744.t1 AT4G00900 24.277 346 196 11 658 986 505 801 1.67e-14 79.3
MS.gene67744.t1 AT4G00900 24.277 346 196 11 658 986 505 801 1.67e-14 79.3

Find 215 sgRNAs with CRISPR-Local

Find 347 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCCTCAACTTGCAGTATT+TGG 0.147533 3.3:+3395418 MS.gene67744:CDS
TCCTTGTTCTTGTCCTATTT+TGG 0.168882 3.3:+3398705 MS.gene67744:CDS
GAAAGCAATGTTTCCATATT+AGG 0.180689 3.3:+3397799 MS.gene67744:CDS
TGAATCTGTTGCCTTATTAT+AGG 0.187667 3.3:+3396118 MS.gene67744:CDS
GACTCTTGCAGTGGTTATTT+TGG 0.189604 3.3:+3399486 MS.gene67744:CDS
TATTGCTTTGTACATTTCTA+TGG 0.204359 3.3:+3396251 MS.gene67744:CDS
GGTTTAAGAACACTTGTTAT+TGG 0.228096 3.3:+3397664 MS.gene67744:CDS
ATATGGATTTATGGCGAATA+TGG 0.231340 3.3:+3395825 MS.gene67744:CDS
TAGGAATATATATGGATTTA+TGG 0.232364 3.3:+3395816 MS.gene67744:CDS
GGATTGTGACTTACCAAAAT+AGG 0.232979 3.3:-3398718 None:intergenic
CTAACTTTCACCTTCATCTT+TGG 0.247529 3.3:-3396963 None:intergenic
TTGAATATTAATGAAGATTT+GGG 0.249431 3.3:+3396363 MS.gene67744:CDS
TTTCAAGTACTGGACTGTTC+TGG 0.249751 3.3:+3400331 MS.gene67744:CDS
GTTGAACTTGACTTTGATTT+TGG 0.251496 3.3:-3394974 None:intergenic
TATCAAAGAGTTGCTGAAAA+TGG 0.261402 3.3:+3400474 MS.gene67744:CDS
TTTGAATATTAATGAAGATT+TGG 0.266623 3.3:+3396362 MS.gene67744:CDS
GGCAAAGCATGGTTGTATTT+TGG 0.266627 3.3:+3399404 MS.gene67744:CDS
CATTGCAGGTTCAATGTCTT+AGG 0.279266 3.3:+3397463 MS.gene67744:intron
ATGAGTAGTTTAAACCATTC+AGG 0.284184 3.3:+3395133 MS.gene67744:CDS
AGAAGAAATGGAAGGATATT+CGG 0.285843 3.3:+3395587 MS.gene67744:CDS
GCGGCAAGCACTGCGGTATT+TGG 0.286706 3.3:+3397739 MS.gene67744:CDS
GGGCAGCAGGGATTAAAGTT+TGG 0.289895 3.3:+3397881 MS.gene67744:CDS
CACAGCATTGCTTCCACGTT+TGG 0.291090 3.3:+3400377 MS.gene67744:CDS
CAGATAAAGTTGAGAATAAC+AGG 0.292097 3.3:+3395527 MS.gene67744:CDS
GGCCTCCACTCTTTGCATAT+TGG 0.293028 3.3:+3399425 MS.gene67744:CDS
TTCTTTCATGTTTCAAGTAC+TGG 0.299241 3.3:+3400321 MS.gene67744:CDS
CATAAACAATTTCTTGTTGT+AGG 0.301151 3.3:-3399359 None:intergenic
ATGCTTATCGAACGAACTTC+TGG 0.308819 3.3:+3397191 MS.gene67744:CDS
TACTTATAGTCTTCAACTTC+CGG 0.312037 3.3:-3396159 None:intergenic
GATAGCAGATGCTCCTAATA+TGG 0.312880 3.3:-3397812 None:intergenic
CAAGAAACTGCTATATCTAT+TGG 0.319476 3.3:+3397922 MS.gene67744:CDS
AAATCAAGTTTCCTATAATA+AGG 0.322804 3.3:-3396129 None:intergenic
GGTGACTCATGCTGTCATTT+GGG 0.323672 3.3:+3399549 MS.gene67744:CDS
TTGAAAATGTGGAAGGAAAA+AGG 0.324840 3.3:+3397018 MS.gene67744:CDS
TACCTCAACTTCCTGGTTAC+TGG 0.327029 3.3:+3399617 MS.gene67744:CDS
TATAAAGTTGAGGATACTTT+AGG 0.331612 3.3:-3399315 None:intergenic
ATAGATTACTTCTCTTATCT+TGG 0.335329 3.3:-3400531 None:intergenic
GTAGGAATATATTGATCATT+TGG 0.337392 3.3:-3394929 None:intergenic
GGCAGCAGGGATTAAAGTTT+GGG 0.341999 3.3:+3397882 MS.gene67744:CDS
AAACCGAATAGGAATATATA+TGG 0.343990 3.3:+3395808 MS.gene67744:CDS
CAGATAGCTTTGATTATTGA+TGG 0.344102 3.3:+3398072 MS.gene67744:CDS
AAAGCTATGCTCAACAATTC+AGG 0.344625 3.3:+3395961 MS.gene67744:CDS
TTCTATGTCTATTCATTCAA+TGG 0.346514 3.3:+3395078 MS.gene67744:CDS
AATCCATATATATTCCTATT+CGG 0.351031 3.3:-3395811 None:intergenic
CTTAGCGACTCAATTGCTTC+CGG 0.354141 3.3:-3397859 None:intergenic
ACAGATTCAACTCGTCCTTA+TGG 0.361871 3.3:-3396104 None:intergenic
ATCGAAGATAAACTTCAAAA+AGG 0.362411 3.3:+3397832 MS.gene67744:CDS
GGGTGACTCATGCTGTCATT+TGG 0.373060 3.3:+3399548 MS.gene67744:CDS
TAGCAAGCATAGGAGATCTT+TGG 0.379581 3.3:+3399464 MS.gene67744:CDS
TACGCCAATGCTTGTTCATC+AGG 0.380801 3.3:-3397146 None:intergenic
CTTGGTTGATGATATGAGAT+AGG 0.382046 3.3:-3400513 None:intergenic
GAAGACTAGGTATGCGAAAC+AGG 0.384864 3.3:+3395735 MS.gene67744:CDS
GAAGAAATGGAAGGATATTC+GGG 0.386577 3.3:+3395588 MS.gene67744:CDS
GTAGTTTCATTGAGAAGAAA+TGG 0.389157 3.3:+3395575 MS.gene67744:CDS
TGGCTATGGATGTTATTAGA+TGG 0.391477 3.3:+3399521 MS.gene67744:CDS
GGAGCTTGTTCGCGTTGGCC+AGG 0.392068 3.3:+3396272 MS.gene67744:CDS
GATGCTATACCTCAACTTCC+TGG 0.395483 3.3:+3399610 MS.gene67744:CDS
TTAGCGACTCAATTGCTTCC+GGG 0.396954 3.3:-3397858 None:intergenic
GTTGAAGACTATAAGTACTA+TGG 0.403402 3.3:+3396165 MS.gene67744:CDS
TTCAAGTACTGGACTGTTCT+GGG 0.403555 3.3:+3400332 MS.gene67744:CDS
GTGCAAACTATTAATCTTGA+TGG 0.406142 3.3:+3395700 MS.gene67744:CDS
AATAGGCACAATAGTATTGC+AGG 0.407285 3.3:-3397069 None:intergenic
ATAGAAATGTACAAAGCAAT+AGG 0.408488 3.3:-3396249 None:intergenic
CTTGCCAATTGCAAAAGCTC+TGG 0.412829 3.3:-3396987 None:intergenic
AACTGTTCAAACAAATTCCT+TGG 0.414617 3.3:-3395346 None:intergenic
GCACTACCAACTATCATTGT+TGG 0.415594 3.3:+3399259 MS.gene67744:CDS
CGCAGTGCTTGCCGCTTCAT+AGG 0.416409 3.3:-3397731 None:intergenic
TGGATGTTATTAGATGGTAT+TGG 0.416696 3.3:+3399527 MS.gene67744:CDS
TAACAAGTGTTCTTAAACCT+AGG 0.418411 3.3:-3397660 None:intergenic
GGATGTTATTAGATGGTATT+GGG 0.420154 3.3:+3399528 MS.gene67744:CDS
CTTCACTCTTACTCTTCCCT+AGG 0.420906 3.3:+3397643 MS.gene67744:CDS
ATCGTCTTCGATCATGAAAT+AGG 0.432489 3.3:-3396295 None:intergenic
AAGGTTCAACCGAGGTATAC+TGG 0.433990 3.3:+3395769 MS.gene67744:CDS
AATTCCTTGGAATGAAAGTA+AGG 0.436300 3.3:-3395333 None:intergenic
TATTGATCATTTGGTGTTCG+TGG 0.440924 3.3:-3394920 None:intergenic
TTGGGCGTGTCGACAACAAT+AGG 0.447622 3.3:-3397086 None:intergenic
TCTATGTCTATTCATTCAAT+GGG 0.452520 3.3:+3395079 MS.gene67744:CDS
CACATAGTCATTGATATTCA+TGG 0.453138 3.3:+3397215 MS.gene67744:CDS
CGTCTGTTTGTGCTGCGGTT+TGG 0.454477 3.3:+3396073 MS.gene67744:CDS
TCGAGTGGCTCCACTGCAAA+AGG 0.458399 3.3:+3398293 MS.gene67744:CDS
GCAAGAGGAACAATTCTGTA+AGG 0.460331 3.3:+3395107 MS.gene67744:CDS
CACTGGAATTATCAAAGGCT+TGG 0.461744 3.3:+3398647 MS.gene67744:CDS
ATTGAGTCGCTAAGGGCAGC+AGG 0.462210 3.3:+3397868 MS.gene67744:CDS
CTGTTCTGGGCATTGTTGCT+AGG 0.462546 3.3:+3400345 MS.gene67744:CDS
CAAGCACTGCGGTATTTGGT+CGG 0.464775 3.3:+3397743 MS.gene67744:CDS
GCGTATGCCGCTGCTGCCTA+TGG 0.465587 3.3:+3397164 MS.gene67744:CDS
AGAGGGTAGGCAAGCTGTAA+TGG 0.465745 3.3:+3398565 MS.gene67744:CDS
TAACAGCTTCACATCAGGAT+TGG 0.466261 3.3:-3397105 None:intergenic
TCAACCAACATTGTGCTTAG+AGG 0.467223 3.3:+3395877 MS.gene67744:CDS
AAAAGAATGTCGGTTATACT+AGG 0.468898 3.3:+3397511 MS.gene67744:CDS
GGTCAATTTACATTTGGCTA+TGG 0.472950 3.3:+3399507 MS.gene67744:CDS
TAGAGATGAAGATGCAAGAT+TGG 0.476919 3.3:+3395231 MS.gene67744:CDS
TCTGCACTGAAACTTTGTAT+TGG 0.477333 3.3:-3396337 None:intergenic
AACAGCTTCACATCAGGATT+GGG 0.480227 3.3:-3397104 None:intergenic
TAATCTAACAGCTTCACATC+AGG 0.486466 3.3:-3397110 None:intergenic
TATCCTCAACTTTATAGTGC+TGG 0.490459 3.3:+3399322 MS.gene67744:CDS
GATCTTAAAGCCAAAGATGA+AGG 0.490950 3.3:+3396953 MS.gene67744:CDS
ACCTAGTTCATTCTCCATGC+CGG 0.491233 3.3:-3396490 None:intergenic
GTTCCTCTCTTATTGATACA+TGG 0.491866 3.3:+3398623 MS.gene67744:CDS
ATATGTTTCGATTCTACCGT+TGG 0.493139 3.3:+3395444 MS.gene67744:CDS
TATGTGTTCTCAGATAAAAC+TGG 0.493604 3.3:+3396396 MS.gene67744:CDS
GGTAAACTATAACTGACATA+AGG 0.496795 3.3:-3396215 None:intergenic
CACTGTCGAGTATGTGTACA+AGG 0.498887 3.3:-3398101 None:intergenic
TAAGTACTATGGATGGGGAT+TGG 0.499992 3.3:+3396176 MS.gene67744:CDS
AAGCACTGCGGTATTTGGTC+GGG 0.500000 3.3:+3397744 MS.gene67744:CDS
CAATCCTTACTTTCATTCCA+AGG 0.502199 3.3:+3395329 MS.gene67744:CDS
GTGAGCTTAAGAATACTAGT+TGG 0.504413 3.3:+3395902 MS.gene67744:CDS
CTAGAAATTTGAATATCACT+AGG 0.504990 3.3:-3400429 None:intergenic
CAACAACTGCAATAAATGAA+TGG 0.507660 3.3:+3399206 MS.gene67744:CDS
TACACTTACTGAAAATAAGA+TGG 0.509982 3.3:+3396419 MS.gene67744:CDS
TATGTCAGTTATAGTTTACC+AGG 0.510492 3.3:+3396218 MS.gene67744:CDS
TGATGTATCAATGATTCAAA+TGG 0.510962 3.3:+3398514 MS.gene67744:CDS
AAGAATACTAGTTGGGCGCT+TGG 0.513157 3.3:+3395910 MS.gene67744:CDS
TAACAATGGTTGATACTTTG+TGG 0.514157 3.3:+3399383 MS.gene67744:CDS
TTATCAACTAGTGATCCAAC+TGG 0.515769 3.3:+3395667 MS.gene67744:CDS
AGAATTCCAACAATGATAGT+TGG 0.519744 3.3:-3399265 None:intergenic
TCTTATTGATACATGGTCAC+TGG 0.520717 3.3:+3398630 MS.gene67744:CDS
AAGACTATAAGTACTATGGA+TGG 0.525277 3.3:+3396169 MS.gene67744:CDS
TCAGTAAAACTCTTTGTCAA+AGG 0.526985 3.3:+3397547 MS.gene67744:CDS
ACTGTGAGGTATGGTTCAAA+AGG 0.527275 3.3:+3395166 MS.gene67744:CDS
CGGAAGCAATTGAGTCGCTA+AGG 0.529694 3.3:+3397860 MS.gene67744:CDS
TCTATGGAGCTTGTTCGCGT+TGG 0.531445 3.3:+3396267 MS.gene67744:CDS
TGAGCTTAAGAATACTAGTT+GGG 0.531877 3.3:+3395903 MS.gene67744:CDS
TGCACATATGCAACACCAGT+TGG 0.534022 3.3:-3395682 None:intergenic
TTAAGTGTGAGAAACCGAAT+AGG 0.534933 3.3:+3395797 MS.gene67744:CDS
GTGGCTCCACTGCAAAAGGC+TGG 0.537855 3.3:+3398297 MS.gene67744:CDS
GTCTCAAAGATGCTCTTGAA+AGG 0.539452 3.3:+3398022 MS.gene67744:CDS
GATGTTGGAGTTGGTATAAG+TGG 0.542521 3.3:+3398539 MS.gene67744:CDS
GGTTTGGTTGAAGCGCCATA+AGG 0.542751 3.3:+3396089 MS.gene67744:CDS
CTTGGTGTCGCGGTCTATTG+TGG 0.544779 3.3:+3395928 MS.gene67744:CDS
TATTGCAGTTGTTGAAGTGA+AGG 0.546160 3.3:-3399197 None:intergenic
GACTATAAGTACTATGGATG+GGG 0.549175 3.3:+3396171 MS.gene67744:CDS
ATCGCCTGATGAACAAGCAT+TGG 0.549505 3.3:+3397142 MS.gene67744:CDS
CAGATGTCCGCTTCTTCACA+AGG 0.550144 3.3:-3398329 None:intergenic
GTGAGTCTAATTTGAAGACT+AGG 0.551484 3.3:+3395722 MS.gene67744:CDS
AACAAGTGTTCTTAAACCTA+GGG 0.551707 3.3:-3397659 None:intergenic
GCACTTCAGAGTTTGAAGAA+TGG 0.552085 3.3:+3397701 MS.gene67744:CDS
AGTACTTGAAACATGAAAGA+AGG 0.553632 3.3:-3400319 None:intergenic
TCTAAGTTCTCTTTGTGACA+TGG 0.558340 3.3:-3395212 None:intergenic
AAAGGTGGTGGTGATTCTGA+AGG 0.562096 3.3:+3395184 MS.gene67744:CDS
CAAATGGCTGATGTTGGAGT+TGG 0.562565 3.3:+3398530 MS.gene67744:CDS
TGTCGTTCTTTGTTGTCGAG+TGG 0.562870 3.3:+3398278 MS.gene67744:CDS
GAAATTGTTTATGTTAACAA+TGG 0.564732 3.3:+3399369 MS.gene67744:CDS
ATGATTCAAATGGCTGATGT+TGG 0.567389 3.3:+3398524 MS.gene67744:CDS
ATTCAATGGGTTCTAGCAAG+AGG 0.567625 3.3:+3395092 MS.gene67744:CDS
AGACTATAAGTACTATGGAT+GGG 0.568634 3.3:+3396170 MS.gene67744:CDS
CGTGGAGATTGTAACAAAAG+TGG 0.569861 3.3:-3394902 None:intergenic
CTTCGATCATGAAATAGGCC+TGG 0.570695 3.3:-3396290 None:intergenic
GTTGGTATAAGTGGACAAGA+GGG 0.570884 3.3:+3398548 MS.gene67744:CDS
AACTTCATATGGATTCTAAG+AGG 0.571610 3.3:+3394879 None:intergenic
TTGTTTCCCTTGTGAAGAAG+CGG 0.573681 3.3:+3398322 MS.gene67744:CDS
TTCGATAAGCATAAAACCAT+AGG 0.579031 3.3:-3397180 None:intergenic
GTTCATCAGGCGATTCACCT+TGG 0.579840 3.3:-3397133 None:intergenic
TTTGTCTATTACACTAAACA+TGG 0.580057 3.3:-3397581 None:intergenic
TGGAAACATTGCTTTCAACA+TGG 0.580153 3.3:-3397792 None:intergenic
CAAGAGGAACAATTCTGTAA+GGG 0.582022 3.3:+3395108 MS.gene67744:CDS
TACCAGTAACCAGGAAGTTG+AGG 0.582228 3.3:-3399619 None:intergenic
CTTCCAAATACTGCAAGTTG+AGG 0.585542 3.3:-3395421 None:intergenic
TGATACTTTGTGGCAAAGCA+TGG 0.585733 3.3:+3399393 MS.gene67744:CDS
GTGACTCATGCTGTCATTTG+GGG 0.586654 3.3:+3399550 MS.gene67744:CDS
GAGCTCCATCGAAAAGAAGT+AGG 0.587843 3.3:+3395983 MS.gene67744:CDS
TTTCATTGAGAAGAAATGGA+AGG 0.588212 3.3:+3395579 MS.gene67744:CDS
TAGTTGGGCGCTTGGTGTCG+CGG 0.589231 3.3:+3395918 MS.gene67744:CDS
AATGGAGTTGAAAATGTGGA+AGG 0.590116 3.3:+3397011 MS.gene67744:CDS
CGACAGTGAACATGAAGAAG+AGG 0.590828 3.3:+3398116 MS.gene67744:CDS
ATGACACTAGCCATCGGAGA+TGG 0.592031 3.3:+3398354 MS.gene67744:CDS
AAATGGAAGGATATTCGGGT+TGG 0.592314 3.3:+3395592 MS.gene67744:CDS
AACTTGACCGAACTCAACAC+CGG 0.593189 3.3:-3395014 None:intergenic
ACTATTGATATAGCAAGCAT+AGG 0.593863 3.3:+3399454 MS.gene67744:CDS
TGTCCAGCACTATAAAGTTG+AGG 0.593916 3.3:-3399325 None:intergenic
ATGGTCACTGGAATTATCAA+AGG 0.595865 3.3:+3398642 MS.gene67744:CDS
ATAGCTTTGATTATTGATGG+TGG 0.600389 3.3:+3398075 MS.gene67744:CDS
AGGTATGCGAAACAGGAGAC+AGG 0.600615 3.3:+3395742 MS.gene67744:CDS
AGATCTCGTACCATCTCCGA+TGG 0.600638 3.3:-3398364 None:intergenic
CATAAAACCATAGGCAGCAG+CGG 0.605167 3.3:-3397171 None:intergenic
ACCGGAAAATGTTACTGTGT+TGG 0.609085 3.3:-3394996 None:intergenic
AGTTGGTATAAGTGGACAAG+AGG 0.609765 3.3:+3398547 MS.gene67744:CDS
GGAAGCAATTGAGTCGCTAA+GGG 0.609769 3.3:+3397861 MS.gene67744:CDS
GAAACAGGAGACAGGTTCAA+AGG 0.611978 3.3:+3395750 MS.gene67744:CDS
ACCGGCATGGAGAATGAACT+AGG 0.612046 3.3:+3396489 MS.gene67744:CDS
ACATCCTCTAAGCACAATGT+TGG 0.612946 3.3:-3395881 None:intergenic
AATAGACAAATCGCACAACA+TGG 0.615952 3.3:+3397594 MS.gene67744:CDS
TGAATATTAATGAAGATTTG+GGG 0.616519 3.3:+3396364 MS.gene67744:CDS
CTAGGTGAATACTCAGTGCA+AGG 0.616609 3.3:+3396507 MS.gene67744:CDS
TTCCAATATGCAAAGAGTGG+AGG 0.618565 3.3:-3399427 None:intergenic
AGGTATGGTTCAAAAGGTGG+TGG 0.619167 3.3:+3395172 MS.gene67744:CDS
AGATCTTTGGACTCTTGCAG+TGG 0.620535 3.3:+3399477 MS.gene67744:CDS
CATGAATATCAATGACTATG+TGG 0.622039 3.3:-3397214 None:intergenic
ATGGCGAATATGGAAATCGA+TGG 0.624834 3.3:+3395835 MS.gene67744:CDS
GATGGTAAGAAGTTATCACT+TGG 0.629993 3.3:+3395853 MS.gene67744:CDS
TTTCAATGTGCAAGCATACG+AGG 0.630431 3.3:+3396444 MS.gene67744:CDS
ATGGCATGCAGCCTATGAAG+CGG 0.630585 3.3:+3397720 MS.gene67744:CDS
TGAGCATAGCTTTAGTCTCG+CGG 0.631072 3.3:-3395951 None:intergenic
GTATAAGTGGACAAGAGGGT+AGG 0.639872 3.3:+3398552 MS.gene67744:CDS
TTGAGTCGCTAAGGGCAGCA+GGG 0.641271 3.3:+3397869 MS.gene67744:CDS
AGAGTGAAGATGAGTTTCTG+TGG 0.644608 3.3:-3397629 None:intergenic
GTGAATACATACCAGTAACC+AGG 0.645155 3.3:-3399628 None:intergenic
AAGGTGGTGGTGATTCTGAA+GGG 0.646912 3.3:+3395185 MS.gene67744:CDS
AGACGATCGATTGTATGATG+AGG 0.647562 3.3:+3396311 MS.gene67744:CDS
AATCACGTCTGTTTGTGCTG+CGG 0.649507 3.3:+3396068 MS.gene67744:CDS
TGACCATGTATCAATAAGAG+AGG 0.653984 3.3:-3398626 None:intergenic
AAGCAATAGGAATCATGACC+TGG 0.654082 3.3:-3396236 None:intergenic
ACAAACAGAACAAAAGCCAA+CGG 0.667705 3.3:-3395460 None:intergenic
GTGAGGTATGGTTCAAAAGG+TGG 0.669439 3.3:+3395169 MS.gene67744:CDS
ACCAAAATAGGACAAGAACA+AGG 0.674548 3.3:-3398706 None:intergenic
AAGAAATGGAGTTGAAAATG+TGG 0.674807 3.3:+3397007 MS.gene67744:CDS
AGATGTCCGCTTCTTCACAA+GGG 0.683316 3.3:-3398328 None:intergenic
TTAATCAAACCAGTATACCT+CGG 0.685339 3.3:-3395778 None:intergenic
TCTGACATGACACTAGCCAT+CGG 0.686147 3.3:+3398348 MS.gene67744:CDS
GATAACAAAACAATATCACA+AGG 0.711577 3.3:-3395649 None:intergenic
CTATGAAGCGGCAAGCACTG+CGG 0.713920 3.3:+3397732 MS.gene67744:CDS
GTAGATTATTGAGTACAATG+TGG 0.715499 3.3:-3399233 None:intergenic
AAAGAAGTAGGCTAGAGACA+CGG 0.729257 3.3:+3395995 MS.gene67744:CDS
GTGAAGCTGTTAGATTACCA+AGG 0.730806 3.3:+3397116 MS.gene67744:CDS
CAGGTTCAAAGGTTCAACCG+AGG 0.752179 3.3:+3395761 MS.gene67744:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAATTGAAATAAGATAA+AGG + chr3.3:3396623-3396642 MS.gene67744:intron 10.0%
!! ATAAAGTAGTGTTAATAATA+CGG + chr3.3:3399864-3399883 MS.gene67744:intron 15.0%
!! TTGAATATTAATGAAGATTT+GGG + chr3.3:3396363-3396382 MS.gene67744:CDS 15.0%
!! TTTGAATATTAATGAAGATT+TGG + chr3.3:3396362-3396381 MS.gene67744:CDS 15.0%
!!! ATCAACTTTAAGATAATATT+TGG + chr3.3:3400088-3400107 MS.gene67744:intron 15.0%
!!! ATTCATATGTTAAAATTTTG+AGG - chr3.3:3399127-3399146 None:intergenic 15.0%
!!! ATTTAAATTTTCTATCTTCA+AGG - chr3.3:3399908-3399927 None:intergenic 15.0%
!!! TATTTATTTATAAGTTGACA+TGG - chr3.3:3400152-3400171 None:intergenic 15.0%
!!! TTTTAAATGCATATAAAGTA+TGG - chr3.3:3400220-3400239 None:intergenic 15.0%
!! AAATCAAGTTTCCTATAATA+AGG - chr3.3:3396132-3396151 None:intergenic 20.0%
!! AATCCATATATATTCCTATT+CGG - chr3.3:3395814-3395833 None:intergenic 20.0%
!! ATTCGTTCGTATTTATTAAT+AGG - chr3.3:3399706-3399725 None:intergenic 20.0%
!! ATTTGTCAACCAAATTTAAA+CGG + chr3.3:3396649-3396668 MS.gene67744:intron 20.0%
!! GAAATTGTTTATGTTAACAA+TGG + chr3.3:3399369-3399388 MS.gene67744:CDS 20.0%
!! GACCGTTAATATATAATTAA+GGG + chr3.3:3398832-3398851 MS.gene67744:intron 20.0%
!! TAGGAATATATATGGATTTA+TGG + chr3.3:3395816-3395835 MS.gene67744:CDS 20.0%
!! TGAATATTAATGAAGATTTG+GGG + chr3.3:3396364-3396383 MS.gene67744:CDS 20.0%
!! TGCCCTTAATTATATATTAA+CGG - chr3.3:3398837-3398856 None:intergenic 20.0%
!! TGTATAATATACACCTTATA+AGG - chr3.3:3399832-3399851 None:intergenic 20.0%
!! TTTCTTCTAAATATTTCTCA+AGG - chr3.3:3399989-3400008 None:intergenic 20.0%
!!! AACTTTAAGATAATATTTGG+TGG + chr3.3:3400091-3400110 MS.gene67744:intron 20.0%
!!! AATGAGAATTTTGAGTTTTT+CGG + chr3.3:3395280-3395299 MS.gene67744:CDS 20.0%
!!! CAAATTTAAGATGTATAGAA+TGG - chr3.3:3400184-3400203 None:intergenic 20.0%
!!! GTTTTTGTTTTTTTTTTGTC+AGG + chr3.3:3399785-3399804 MS.gene67744:intron 20.0%
!!! TAGAATAGGTTTTACTAAAA+AGG - chr3.3:3400012-3400031 None:intergenic 20.0%
!!! TATTATCTTAAAGTTGATAC+TGG - chr3.3:3400086-3400105 None:intergenic 20.0%
!!! TATTTTGGTCAATTTACATT+TGG + chr3.3:3399501-3399520 MS.gene67744:CDS 20.0%
!!! TCAAGGTTATTTTTGTAATA+TGG - chr3.3:3399891-3399910 None:intergenic 20.0%
! AAACCGAATAGGAATATATA+TGG + chr3.3:3395808-3395827 MS.gene67744:CDS 25.0%
! AAAGCAATGTATAATTGCAA+AGG - chr3.3:3400243-3400262 None:intergenic 25.0%
! AATAGGTGGTTAATTACATT+TGG + chr3.3:3396685-3396704 MS.gene67744:intron 25.0%
! ATAGAAATGTACAAAGCAAT+AGG - chr3.3:3396252-3396271 None:intergenic 25.0%
! ATCGAAGATAAACTTCAAAA+AGG + chr3.3:3397832-3397851 MS.gene67744:CDS 25.0%
! CTAGAAATTTGAATATCACT+AGG - chr3.3:3400432-3400451 None:intergenic 25.0%
! CTAGTAAAGAATGTATTGAA+AGG - chr3.3:3398418-3398437 None:intergenic 25.0%
! GAAAAACTCAAAATTCTCAT+TGG - chr3.3:3395281-3395300 None:intergenic 25.0%
! GATAACAAAACAATATCACA+AGG - chr3.3:3395652-3395671 None:intergenic 25.0%
! GGACCGTTAATATATAATTA+AGG + chr3.3:3398831-3398850 MS.gene67744:intron 25.0%
! GTAGAAAAATCACTTAGAAT+AGG - chr3.3:3400026-3400045 None:intergenic 25.0%
! GTAGGAATATATTGATCATT+TGG - chr3.3:3394932-3394951 None:intergenic 25.0%
! TACACTTACTGAAAATAAGA+TGG + chr3.3:3396419-3396438 MS.gene67744:CDS 25.0%
! TATAAAGTTGAGGATACTTT+AGG - chr3.3:3399318-3399337 None:intergenic 25.0%
! TATTGCTTTGTACATTTCTA+TGG + chr3.3:3396251-3396270 MS.gene67744:CDS 25.0%
! TCTATGTCTATTCATTCAAT+GGG + chr3.3:3395079-3395098 MS.gene67744:CDS 25.0%
! TGATATGATAAACCATTTGT+TGG - chr3.3:3398742-3398761 None:intergenic 25.0%
! TGATGTATCAATGATTCAAA+TGG + chr3.3:3398514-3398533 MS.gene67744:CDS 25.0%
! TTCTATGTCTATTCATTCAA+TGG + chr3.3:3395078-3395097 MS.gene67744:CDS 25.0%
! TTTGTCTATTACACTAAACA+TGG - chr3.3:3397584-3397603 None:intergenic 25.0%
!! ATATATTTTACAACCAAACG+TGG - chr3.3:3400393-3400412 None:intergenic 25.0%
!! ATCAGGCTTTTATAGATAAT+TGG + chr3.3:3398810-3398829 MS.gene67744:intron 25.0%
!! ATTTAAGATGTATAGAATGG+TGG - chr3.3:3400181-3400200 None:intergenic 25.0%
!! CATAAACAATTTCTTGTTGT+AGG - chr3.3:3399362-3399381 None:intergenic 25.0%
!!! AGTTTTTTCGCTCTAATATA+CGG - chr3.3:3398459-3398478 None:intergenic 25.0%
!!! CTGTTTTAACCGTTTAAATT+TGG - chr3.3:3396661-3396680 None:intergenic 25.0%
AACAAGTGTTCTTAAACCTA+GGG - chr3.3:3397662-3397681 None:intergenic 30.0%
AACAATACCAGATGCATTAA+AGG - chr3.3:3396604-3396623 None:intergenic 30.0%
AACTGTTCAAACAAATTCCT+TGG - chr3.3:3395349-3395368 None:intergenic 30.0%
AAGAAATGGAGTTGAAAATG+TGG + chr3.3:3397007-3397026 MS.gene67744:CDS 30.0%
AAGACTATAAGTACTATGGA+TGG + chr3.3:3396169-3396188 MS.gene67744:CDS 30.0%
AATTCCTTGGAATGAAAGTA+AGG - chr3.3:3395336-3395355 None:intergenic 30.0%
ACGGTTAAAACAGTTCAAAT+AGG + chr3.3:3396668-3396687 MS.gene67744:intron 30.0%
ACTATTGATATAGCAAGCAT+AGG + chr3.3:3399454-3399473 MS.gene67744:CDS 30.0%
AGAAGAAATGGAAGGATATT+CGG + chr3.3:3395587-3395606 MS.gene67744:CDS 30.0%
AGAATTCCAACAATGATAGT+TGG - chr3.3:3399268-3399287 None:intergenic 30.0%
AGACTATAAGTACTATGGAT+GGG + chr3.3:3396170-3396189 MS.gene67744:CDS 30.0%
AGGTAATTACGTTCAGTATA+CGG - chr3.3:3396791-3396810 None:intergenic 30.0%
AGTACTTGAAACATGAAAGA+AGG - chr3.3:3400322-3400341 None:intergenic 30.0%
ATATGGATTTATGGCGAATA+TGG + chr3.3:3395825-3395844 MS.gene67744:CDS 30.0%
ATGAGTAGTTTAAACCATTC+AGG + chr3.3:3395133-3395152 MS.gene67744:CDS 30.0%
CAACAACTGCAATAAATGAA+TGG + chr3.3:3399206-3399225 MS.gene67744:CDS 30.0%
CAAGAAACTGCTATATCTAT+TGG + chr3.3:3397922-3397941 MS.gene67744:CDS 30.0%
CACATAGTCATTGATATTCA+TGG + chr3.3:3397215-3397234 MS.gene67744:CDS 30.0%
CAGATAAAGTTGAGAATAAC+AGG + chr3.3:3395527-3395546 MS.gene67744:CDS 30.0%
CAGTGATAGAAAAAGAATGT+CGG + chr3.3:3397501-3397520 MS.gene67744:CDS 30.0%
CATATAAAGTATGGTAGCAA+AGG - chr3.3:3400211-3400230 None:intergenic 30.0%
CATGAATATCAATGACTATG+TGG - chr3.3:3397217-3397236 None:intergenic 30.0%
CGGTTAATGAGTATATAAGA+TGG - chr3.3:3396771-3396790 None:intergenic 30.0%
GAAAGCAATGTTTCCATATT+AGG + chr3.3:3397799-3397818 MS.gene67744:CDS 30.0%
GAGAAAGATTCATTAGAATG+TGG - chr3.3:3397435-3397454 None:intergenic 30.0%
GGATGTTATTAGATGGTATT+GGG + chr3.3:3399528-3399547 MS.gene67744:CDS 30.0%
GGTAAACTATAACTGACATA+AGG - chr3.3:3396218-3396237 None:intergenic 30.0%
GTAGATTATTGAGTACAATG+TGG - chr3.3:3399236-3399255 None:intergenic 30.0%
GTAGTTTCATTGAGAAGAAA+TGG + chr3.3:3395575-3395594 MS.gene67744:CDS 30.0%
GTGCAAACTATTAATCTTGA+TGG + chr3.3:3395700-3395719 MS.gene67744:CDS 30.0%
GTTAAAACAGTTCAAATAGG+TGG + chr3.3:3396671-3396690 MS.gene67744:intron 30.0%
GTTGAAGACTATAAGTACTA+TGG + chr3.3:3396165-3396184 MS.gene67744:CDS 30.0%
TAACAAGTGTTCTTAAACCT+AGG - chr3.3:3397663-3397682 None:intergenic 30.0%
TAACGATTGTTCACATAGTT+TGG + chr3.3:3399727-3399746 MS.gene67744:intron 30.0%
TACTTATAGTCTTCAACTTC+CGG - chr3.3:3396162-3396181 None:intergenic 30.0%
TATCAAAGAGTTGCTGAAAA+TGG + chr3.3:3400474-3400493 MS.gene67744:CDS 30.0%
TATCCATGTGTTACAATTAC+AGG + chr3.3:3398485-3398504 MS.gene67744:intron 30.0%
TATGTCAGTTATAGTTTACC+AGG + chr3.3:3396218-3396237 MS.gene67744:CDS 30.0%
TATGTGTTCTCAGATAAAAC+TGG + chr3.3:3396396-3396415 MS.gene67744:CDS 30.0%
TCAGTAAAACTCTTTGTCAA+AGG + chr3.3:3397547-3397566 MS.gene67744:CDS 30.0%
TGAGCTTAAGAATACTAGTT+GGG + chr3.3:3395903-3395922 MS.gene67744:CDS 30.0%
TGGATGTTATTAGATGGTAT+TGG + chr3.3:3399527-3399546 MS.gene67744:CDS 30.0%
TTAATCAAACCAGTATACCT+CGG - chr3.3:3395781-3395800 None:intergenic 30.0%
TTCAAAGATATAGACGCAAT+TGG - chr3.3:3399753-3399772 None:intergenic 30.0%
TTCGATAAGCATAAAACCAT+AGG - chr3.3:3397183-3397202 None:intergenic 30.0%
TTGAAAATGTGGAAGGAAAA+AGG + chr3.3:3397018-3397037 MS.gene67744:CDS 30.0%
TTTCATTGAGAAGAAATGGA+AGG + chr3.3:3395579-3395598 MS.gene67744:CDS 30.0%
TTTCTCATTATGAACATTGC+AGG + chr3.3:3397449-3397468 MS.gene67744:intron 30.0%
! AAAAGAATGTCGGTTATACT+AGG + chr3.3:3397511-3397530 MS.gene67744:CDS 30.0%
! ACTGCAGCTTATGTATTTTT+AGG + chr3.3:3397289-3397308 MS.gene67744:intron 30.0%
! GAGTACAATATCTGAAACTA+GGG - chr3.3:3399051-3399070 None:intergenic 30.0%
! TAACAATGGTTGATACTTTG+TGG + chr3.3:3399383-3399402 MS.gene67744:CDS 30.0%
! TATTTTCTACTCTCAGTTGA+TGG + chr3.3:3396927-3396946 MS.gene67744:intron 30.0%
! TGAATCTGTTGCCTTATTAT+AGG + chr3.3:3396118-3396137 MS.gene67744:CDS 30.0%
! TGAGTACAATATCTGAAACT+AGG - chr3.3:3399052-3399071 None:intergenic 30.0%
! TTCTTTCATGTTTCAAGTAC+TGG + chr3.3:3400321-3400340 MS.gene67744:CDS 30.0%
! TTTTGCGACAATAATCTAAG+TGG - chr3.3:3396834-3396853 None:intergenic 30.0%
!! ATAGCTTTGATTATTGATGG+TGG + chr3.3:3398075-3398094 MS.gene67744:CDS 30.0%
!! ATTAAAGTTTGGGTTTTGAC+TGG + chr3.3:3397892-3397911 MS.gene67744:CDS 30.0%
!! CAGATAGCTTTGATTATTGA+TGG + chr3.3:3398072-3398091 MS.gene67744:CDS 30.0%
!! CTGCAGCTTATGTATTTTTA+GGG + chr3.3:3397290-3397309 MS.gene67744:intron 30.0%
!! GCAACAATTTTGATGAATGA+CGG + chr3.3:3395553-3395572 MS.gene67744:CDS 30.0%
!! GGTTTAAGAACACTTGTTAT+TGG + chr3.3:3397664-3397683 MS.gene67744:CDS 30.0%
!! GTTGAACTTGACTTTGATTT+TGG - chr3.3:3394977-3394996 None:intergenic 30.0%
!! TAAAGTTGATACTGGTTACA+TGG - chr3.3:3400078-3400097 None:intergenic 30.0%
!!! AAATTCTCATTGGTTTTCTC+AGG - chr3.3:3395271-3395290 None:intergenic 30.0%
!!! GATGTTTTATTTGCTGATCA+TGG + chr3.3:3398210-3398229 MS.gene67744:intron 30.0%
AAAGCTATGCTCAACAATTC+AGG + chr3.3:3395961-3395980 MS.gene67744:CDS 35.0%
AACATTGCCTTTAATGCATC+TGG + chr3.3:3396594-3396613 MS.gene67744:intron 35.0%
AATAGACAAATCGCACAACA+TGG + chr3.3:3397594-3397613 MS.gene67744:CDS 35.0%
AATAGGCACAATAGTATTGC+AGG - chr3.3:3397072-3397091 None:intergenic 35.0%
AATGGAGTTGAAAATGTGGA+AGG + chr3.3:3397011-3397030 MS.gene67744:CDS 35.0%
ACAAACAGAACAAAAGCCAA+CGG - chr3.3:3395463-3395482 None:intergenic 35.0%
ACCAAAATAGGACAAGAACA+AGG - chr3.3:3398709-3398728 None:intergenic 35.0%
AGGTGGTTAATTACATTTGG+TGG + chr3.3:3396688-3396707 MS.gene67744:intron 35.0%
ATAAGCTGCAGTTACGATTA+TGG - chr3.3:3397281-3397300 None:intergenic 35.0%
ATATGTTTCGATTCTACCGT+TGG + chr3.3:3395444-3395463 MS.gene67744:CDS 35.0%
ATCGTCTTCGATCATGAAAT+AGG - chr3.3:3396298-3396317 None:intergenic 35.0%
ATGATTCAAATGGCTGATGT+TGG + chr3.3:3398524-3398543 MS.gene67744:CDS 35.0%
ATGGTCACTGGAATTATCAA+AGG + chr3.3:3398642-3398661 MS.gene67744:CDS 35.0%
CAAGAGGAACAATTCTGTAA+GGG + chr3.3:3395108-3395127 MS.gene67744:CDS 35.0%
CAATCCTTACTTTCATTCCA+AGG + chr3.3:3395329-3395348 MS.gene67744:CDS 35.0%
CTAACTTTCACCTTCATCTT+TGG - chr3.3:3396966-3396985 None:intergenic 35.0%
GAAGAAATGGAAGGATATTC+GGG + chr3.3:3395588-3395607 MS.gene67744:CDS 35.0%
GACTATAAGTACTATGGATG+GGG + chr3.3:3396171-3396190 MS.gene67744:CDS 35.0%
GATCTTAAAGCCAAAGATGA+AGG + chr3.3:3396953-3396972 MS.gene67744:CDS 35.0%
GATGGTAAGAAGTTATCACT+TGG + chr3.3:3395853-3395872 MS.gene67744:CDS 35.0%
GGATTGTGACTTACCAAAAT+AGG - chr3.3:3398721-3398740 None:intergenic 35.0%
GGTCAATTTACATTTGGCTA+TGG + chr3.3:3399507-3399526 MS.gene67744:CDS 35.0%
GTAAGTCACAATCCAACAAA+TGG + chr3.3:3398727-3398746 MS.gene67744:intron 35.0%
GTGAGCTTAAGAATACTAGT+TGG + chr3.3:3395902-3395921 MS.gene67744:CDS 35.0%
GTGAGTCTAATTTGAAGACT+AGG + chr3.3:3395722-3395741 MS.gene67744:CDS 35.0%
GTTCCTCTCTTATTGATACA+TGG + chr3.3:3398623-3398642 MS.gene67744:CDS 35.0%
TAATCTAACAGCTTCACATC+AGG - chr3.3:3397113-3397132 None:intergenic 35.0%
TAGAGATGAAGATGCAAGAT+TGG + chr3.3:3395231-3395250 MS.gene67744:CDS 35.0%
TATCCTCAACTTTATAGTGC+TGG + chr3.3:3399322-3399341 MS.gene67744:CDS 35.0%
TATTGCAGTTGTTGAAGTGA+AGG - chr3.3:3399200-3399219 None:intergenic 35.0%
TCAGGAAAAACTGGTATTGT+AGG - chr3.3:3394950-3394969 None:intergenic 35.0%
TCTAAGTTCTCTTTGTGACA+TGG - chr3.3:3395215-3395234 None:intergenic 35.0%
TCTGCACTGAAACTTTGTAT+TGG - chr3.3:3396340-3396359 None:intergenic 35.0%
TCTTATTGATACATGGTCAC+TGG + chr3.3:3398630-3398649 MS.gene67744:CDS 35.0%
TGACCATGTATCAATAAGAG+AGG - chr3.3:3398629-3398648 None:intergenic 35.0%
TGGAAACATTGCTTTCAACA+TGG - chr3.3:3397795-3397814 None:intergenic 35.0%
TGGCTAGAATTCACCTTATA+AGG + chr3.3:3399816-3399835 MS.gene67744:intron 35.0%
TGGCTATGGATGTTATTAGA+TGG + chr3.3:3399521-3399540 MS.gene67744:CDS 35.0%
TTAAGTGTGAGAAACCGAAT+AGG + chr3.3:3395797-3395816 MS.gene67744:CDS 35.0%
TTATCAACTAGTGATCCAAC+TGG + chr3.3:3395667-3395686 MS.gene67744:CDS 35.0%
TTCATGCAGCTTAAATAGGT+AGG - chr3.3:3396811-3396830 None:intergenic 35.0%
TTCCTAACTTTGACATTGCA+GGG + chr3.3:3400296-3400315 MS.gene67744:intron 35.0%
TTTCCTAACTTTGACATTGC+AGG + chr3.3:3400295-3400314 MS.gene67744:intron 35.0%
! AACTAGGGTTTAGTCTCTTT+TGG - chr3.3:3399036-3399055 None:intergenic 35.0%
! AAGAGTTTTACTGAACTGTC+AGG - chr3.3:3397541-3397560 None:intergenic 35.0%
! AATGGCATCAGATTTTGCAA+TGG + chr3.3:3398583-3398602 MS.gene67744:CDS 35.0%
! ACCAACACAGTAACATTTTC+CGG + chr3.3:3394995-3395014 MS.gene67744:CDS 35.0%
! AGAGTTTTACTGAACTGTCA+GGG - chr3.3:3397540-3397559 None:intergenic 35.0%
! ATGGCATCAGATTTTGCAAT+GGG + chr3.3:3398584-3398603 MS.gene67744:CDS 35.0%
! ATTTTGCAATGGGACAGTTT+AGG + chr3.3:3398594-3398613 MS.gene67744:CDS 35.0%
! CTTTTCCAATATGCAAAGAG+TGG - chr3.3:3399433-3399452 None:intergenic 35.0%
! CTTTTGCAATTGGCAAGAAA+TGG + chr3.3:3396993-3397012 MS.gene67744:CDS 35.0%
! TCCTTGTTCTTGTCCTATTT+TGG + chr3.3:3398705-3398724 MS.gene67744:CDS 35.0%
!! CAGTACTTTTTGATCCTGAA+TGG - chr3.3:3395150-3395169 None:intergenic 35.0%
!! CTTGGTTGATGATATGAGAT+AGG - chr3.3:3400516-3400535 None:intergenic 35.0%
!! GAAACTTGATTTTTCGAAGC+CGG + chr3.3:3396140-3396159 MS.gene67744:CDS 35.0%
!! GCTTTTGTTCTGTTTGTTAC+TGG + chr3.3:3395466-3395485 MS.gene67744:CDS 35.0%
!! TATTGATCATTTGGTGTTCG+TGG - chr3.3:3394923-3394942 None:intergenic 35.0%
!! TCAAAAAGTACTGTGAGGTA+TGG + chr3.3:3395157-3395176 MS.gene67744:CDS 35.0%
!! TGAAAGATGCTTTTGAGGAT+TGG + chr3.3:3395491-3395510 MS.gene67744:CDS 35.0%
!!! GTTCTGTGCCTTTGTTTTTT+AGG + chr3.3:3399158-3399177 MS.gene67744:intron 35.0%
AAAGAAGTAGGCTAGAGACA+CGG + chr3.3:3395995-3396014 MS.gene67744:CDS 40.0%
AAATGGAAGGATATTCGGGT+TGG + chr3.3:3395592-3395611 MS.gene67744:CDS 40.0%
AACAGCTTCACATCAGGATT+GGG - chr3.3:3397107-3397126 None:intergenic 40.0%
AAGCAATAGGAATCATGACC+TGG - chr3.3:3396239-3396258 None:intergenic 40.0%
AATTTGTAACGCGAGTGTCT+AGG + chr3.3:3397343-3397362 MS.gene67744:intron 40.0%
ACAGATTCAACTCGTCCTTA+TGG - chr3.3:3396107-3396126 None:intergenic 40.0%
ACATCCTCTAAGCACAATGT+TGG - chr3.3:3395884-3395903 None:intergenic 40.0%
ACCGGAAAATGTTACTGTGT+TGG - chr3.3:3394999-3395018 None:intergenic 40.0%
ACTGTGAGGTATGGTTCAAA+AGG + chr3.3:3395166-3395185 MS.gene67744:CDS 40.0%
AGACGATCGATTGTATGATG+AGG + chr3.3:3396311-3396330 MS.gene67744:CDS 40.0%
AGAGTGAAGATGAGTTTCTG+TGG - chr3.3:3397632-3397651 None:intergenic 40.0%
ATGCCTTGAGAATGATCTCA+AGG - chr3.3:3399011-3399030 None:intergenic 40.0%
ATGCTTATCGAACGAACTTC+TGG + chr3.3:3397191-3397210 MS.gene67744:CDS 40.0%
ATGGCGAATATGGAAATCGA+TGG + chr3.3:3395835-3395854 MS.gene67744:CDS 40.0%
ATTTGTAACGCGAGTGTCTA+GGG + chr3.3:3397344-3397363 MS.gene67744:intron 40.0%
CACTGGAATTATCAAAGGCT+TGG + chr3.3:3398647-3398666 MS.gene67744:CDS 40.0%
CATTGCAGGTTCAATGTCTT+AGG + chr3.3:3397463-3397482 MS.gene67744:intron 40.0%
CGTGGAGATTGTAACAAAAG+TGG - chr3.3:3394905-3394924 None:intergenic 40.0%
CTTCCAAATACTGCAAGTTG+AGG - chr3.3:3395424-3395443 None:intergenic 40.0%
CTTCCTCAACTTGCAGTATT+TGG + chr3.3:3395418-3395437 MS.gene67744:CDS 40.0%
GATAGCAGATGCTCCTAATA+TGG - chr3.3:3397815-3397834 None:intergenic 40.0%
GATTACAGTGCCACAAAAAC+CGG + chr3.3:3396471-3396490 MS.gene67744:CDS 40.0%
GCAAGAGGAACAATTCTGTA+AGG + chr3.3:3395107-3395126 MS.gene67744:CDS 40.0%
GCACCTGTAATTGTAACACA+TGG - chr3.3:3398491-3398510 None:intergenic 40.0%
GCACTACCAACTATCATTGT+TGG + chr3.3:3399259-3399278 MS.gene67744:CDS 40.0%
GCACTTCAGAGTTTGAAGAA+TGG + chr3.3:3397701-3397720 MS.gene67744:CDS 40.0%
GTCTCAAAGATGCTCTTGAA+AGG + chr3.3:3398022-3398041 MS.gene67744:CDS 40.0%
GTGAAGCTGTTAGATTACCA+AGG + chr3.3:3397116-3397135 MS.gene67744:CDS 40.0%
GTGAATACATACCAGTAACC+AGG - chr3.3:3399631-3399650 None:intergenic 40.0%
GTGGTTCATGCAGCTTAAAT+AGG - chr3.3:3396815-3396834 None:intergenic 40.0%
GTTGGTATAAGTGGACAAGA+GGG + chr3.3:3398548-3398567 MS.gene67744:CDS 40.0%
TAACAGCTTCACATCAGGAT+TGG - chr3.3:3397108-3397127 None:intergenic 40.0%
TAAGGTGAATTCTAGCCACT+AGG - chr3.3:3399814-3399833 None:intergenic 40.0%
TAAGTACTATGGATGGGGAT+TGG + chr3.3:3396176-3396195 MS.gene67744:CDS 40.0%
TAGCAAGCATAGGAGATCTT+TGG + chr3.3:3399464-3399483 MS.gene67744:CDS 40.0%
TCAACCAACATTGTGCTTAG+AGG + chr3.3:3395877-3395896 MS.gene67744:CDS 40.0%
TGATACTTTGTGGCAAAGCA+TGG + chr3.3:3399393-3399412 MS.gene67744:CDS 40.0%
TGCCTTGAGAATGATCTCAA+GGG - chr3.3:3399010-3399029 None:intergenic 40.0%
TGTCCAGCACTATAAAGTTG+AGG - chr3.3:3399328-3399347 None:intergenic 40.0%
TTCCAATATGCAAAGAGTGG+AGG - chr3.3:3399430-3399449 None:intergenic 40.0%
TTGATGTCTGTGTCAGTATC+AGG + chr3.3:3398793-3398812 MS.gene67744:intron 40.0%
TTGTTTCCCTTGTGAAGAAG+CGG + chr3.3:3398322-3398341 MS.gene67744:CDS 40.0%
TTTCAATGTGCAAGCATACG+AGG + chr3.3:3396444-3396463 MS.gene67744:CDS 40.0%
! AGACGCTCTAAACATGACTT+AGG + chr3.3:3398937-3398956 MS.gene67744:intron 40.0%
! AGTTGGTATAAGTGGACAAG+AGG + chr3.3:3398547-3398566 MS.gene67744:CDS 40.0%
! ATTCAATGGGTTCTAGCAAG+AGG + chr3.3:3395092-3395111 MS.gene67744:CDS 40.0%
! GACGCTCTAAACATGACTTA+GGG + chr3.3:3398938-3398957 MS.gene67744:intron 40.0%
! GACTCTTGCAGTGGTTATTT+TGG + chr3.3:3399486-3399505 MS.gene67744:CDS 40.0%
! GGCAAAGCATGGTTGTATTT+TGG + chr3.3:3399404-3399423 MS.gene67744:CDS 40.0%
! TAGTCCAGAGCTTTTGCAAT+TGG + chr3.3:3396983-3397002 MS.gene67744:CDS 40.0%
! TCTAGCCTACTTCTTTTCGA+TGG - chr3.3:3395991-3396010 None:intergenic 40.0%
! TGGTGTGAAAGATGCTTTTG+AGG + chr3.3:3395486-3395505 MS.gene67744:CDS 40.0%
! TTTGGTAGCTCAGGAAAAAC+TGG - chr3.3:3394959-3394978 None:intergenic 40.0%
!! AAGATGCTTTTGAGGATTGG+AGG + chr3.3:3395494-3395513 MS.gene67744:CDS 40.0%
!! ACATTTTCCGGTGTTGAGTT+CGG + chr3.3:3395007-3395026 MS.gene67744:CDS 40.0%
!! ATGCTTTTAGAAGCCTTCTG+AGG - chr3.3:3398915-3398934 None:intergenic 40.0%
!! CAGGATCAAAAAGTACTGTG+AGG + chr3.3:3395152-3395171 MS.gene67744:CDS 40.0%
!! GACTTTGATTTTGGTAGCTC+AGG - chr3.3:3394968-3394987 None:intergenic 40.0%
!! GATGTTGGAGTTGGTATAAG+TGG + chr3.3:3398539-3398558 MS.gene67744:CDS 40.0%
!! TAAACTTCAAAAAGGCGTCC+CGG + chr3.3:3397840-3397859 MS.gene67744:CDS 40.0%
!! TTCAAGTACTGGACTGTTCT+GGG + chr3.3:3400332-3400351 MS.gene67744:CDS 40.0%
!! TTTCAAGTACTGGACTGTTC+TGG + chr3.3:3400331-3400350 MS.gene67744:CDS 40.0%
!!! TTTTTTGTCAGGTAGCCTAG+TGG + chr3.3:3399796-3399815 MS.gene67744:intron 40.0%
AACTTGACCGAACTCAACAC+CGG - chr3.3:3395017-3395036 None:intergenic 45.0%
AAGAATACTAGTTGGGCGCT+TGG + chr3.3:3395910-3395929 MS.gene67744:CDS 45.0%
AAGGTTCAACCGAGGTATAC+TGG + chr3.3:3395769-3395788 MS.gene67744:CDS 45.0%
AATCACGTCTGTTTGTGCTG+CGG + chr3.3:3396068-3396087 MS.gene67744:CDS 45.0%
ACCTAGTTCATTCTCCATGC+CGG - chr3.3:3396493-3396512 None:intergenic 45.0%
AGATCTTTGGACTCTTGCAG+TGG + chr3.3:3399477-3399496 MS.gene67744:CDS 45.0%
AGATGTCCGCTTCTTCACAA+GGG - chr3.3:3398331-3398350 None:intergenic 45.0%
AGGTATGGTTCAAAAGGTGG+TGG + chr3.3:3395172-3395191 MS.gene67744:CDS 45.0%
ATCGCCTGATGAACAAGCAT+TGG + chr3.3:3397142-3397161 MS.gene67744:CDS 45.0%
CAAATGGCTGATGTTGGAGT+TGG + chr3.3:3398530-3398549 MS.gene67744:CDS 45.0%
CACTGTCGAGTATGTGTACA+AGG - chr3.3:3398104-3398123 None:intergenic 45.0%
CATAAAACCATAGGCAGCAG+CGG - chr3.3:3397174-3397193 None:intergenic 45.0%
CCTTGAGAATGATCTCAAGG+GGG - chr3.3:3399008-3399027 None:intergenic 45.0%
CGACAGTGAACATGAAGAAG+AGG + chr3.3:3398116-3398135 MS.gene67744:CDS 45.0%
CTAGGTGAATACTCAGTGCA+AGG + chr3.3:3396507-3396526 MS.gene67744:CDS 45.0%
CTTAGCGACTCAATTGCTTC+CGG - chr3.3:3397862-3397881 None:intergenic 45.0%
CTTCACTCTTACTCTTCCCT+AGG + chr3.3:3397643-3397662 MS.gene67744:CDS 45.0%
CTTCGATCATGAAATAGGCC+TGG - chr3.3:3396293-3396312 None:intergenic 45.0%
CTTGCCAATTGCAAAAGCTC+TGG - chr3.3:3396990-3397009 None:intergenic 45.0%
GAAACAGGAGACAGGTTCAA+AGG + chr3.3:3395750-3395769 MS.gene67744:CDS 45.0%
GAAGACTAGGTATGCGAAAC+AGG + chr3.3:3395735-3395754 MS.gene67744:CDS 45.0%
GAGCTCCATCGAAAAGAAGT+AGG + chr3.3:3395983-3396002 MS.gene67744:CDS 45.0%
GATGCTATACCTCAACTTCC+TGG + chr3.3:3399610-3399629 MS.gene67744:CDS 45.0%
GCCTTGAGAATGATCTCAAG+GGG - chr3.3:3399009-3399028 None:intergenic 45.0%
GGAAGCAATTGAGTCGCTAA+GGG + chr3.3:3397861-3397880 MS.gene67744:CDS 45.0%
GGCAGCAGGGATTAAAGTTT+GGG + chr3.3:3397882-3397901 MS.gene67744:CDS 45.0%
GTATAAGTGGACAAGAGGGT+AGG + chr3.3:3398552-3398571 MS.gene67744:CDS 45.0%
GTGAGGTATGGTTCAAAAGG+TGG + chr3.3:3395169-3395188 MS.gene67744:CDS 45.0%
TACCAGTAACCAGGAAGTTG+AGG - chr3.3:3399622-3399641 None:intergenic 45.0%
TACCTCAACTTCCTGGTTAC+TGG + chr3.3:3399617-3399636 MS.gene67744:CDS 45.0%
TACGCCAATGCTTGTTCATC+AGG - chr3.3:3397149-3397168 None:intergenic 45.0%
TCTGACATGACACTAGCCAT+CGG + chr3.3:3398348-3398367 MS.gene67744:CDS 45.0%
TGCACATATGCAACACCAGT+TGG - chr3.3:3395685-3395704 None:intergenic 45.0%
TTAGCGACTCAATTGCTTCC+GGG - chr3.3:3397861-3397880 None:intergenic 45.0%
! AAAGGTGGTGGTGATTCTGA+AGG + chr3.3:3395184-3395203 MS.gene67744:CDS 45.0%
! AAGGTGGTGGTGATTCTGAA+GGG + chr3.3:3395185-3395204 MS.gene67744:CDS 45.0%
! ACAATACCAGCCTTTTGCAG+TGG - chr3.3:3398306-3398325 None:intergenic 45.0%
! GGTGACTCATGCTGTCATTT+GGG + chr3.3:3399549-3399568 MS.gene67744:CDS 45.0%
! GTGACTCATGCTGTCATTTG+GGG + chr3.3:3399550-3399569 MS.gene67744:CDS 45.0%
! TGTCGTTCTTTGTTGTCGAG+TGG + chr3.3:3398278-3398297 MS.gene67744:CDS 45.0%
!! TGAGCATAGCTTTAGTCTCG+CGG - chr3.3:3395954-3395973 None:intergenic 45.0%
!!! ATTCTCCATGCCGGTTTTTG+TGG - chr3.3:3396484-3396503 None:intergenic 45.0%
ACCGGCATGGAGAATGAACT+AGG + chr3.3:3396489-3396508 MS.gene67744:CDS 50.0%
ACTTAGCCCCCAAGCAACTT+GGG - chr3.3:3398964-3398983 None:intergenic 50.0%
ACTTAGGGCCCAAGTTGCTT+GGG + chr3.3:3398953-3398972 MS.gene67744:intron 50.0%
AGAGGGTAGGCAAGCTGTAA+TGG + chr3.3:3398565-3398584 MS.gene67744:CDS 50.0%
AGATCTCGTACCATCTCCGA+TGG - chr3.3:3398367-3398386 None:intergenic 50.0%
AGGTATGCGAAACAGGAGAC+AGG + chr3.3:3395742-3395761 MS.gene67744:CDS 50.0%
ATGACACTAGCCATCGGAGA+TGG + chr3.3:3398354-3398373 MS.gene67744:CDS 50.0%
ATGGCATGCAGCCTATGAAG+CGG + chr3.3:3397720-3397739 MS.gene67744:CDS 50.0%
CACAGCATTGCTTCCACGTT+TGG + chr3.3:3400377-3400396 MS.gene67744:CDS 50.0%
CAGATGTCCGCTTCTTCACA+AGG - chr3.3:3398332-3398351 None:intergenic 50.0%
CAGGTTCAAAGGTTCAACCG+AGG + chr3.3:3395761-3395780 MS.gene67744:CDS 50.0%
CCCCCTTGAGATCATTCTCA+AGG + chr3.3:3399005-3399024 MS.gene67744:intron 50.0%
CGGAAGCAATTGAGTCGCTA+AGG + chr3.3:3397860-3397879 MS.gene67744:CDS 50.0%
GGCCCTGCAATGTCAAAGTT+AGG - chr3.3:3400301-3400320 None:intergenic 50.0%
GGCCTCCACTCTTTGCATAT+TGG + chr3.3:3399425-3399444 MS.gene67744:CDS 50.0%
GGGCAGCAGGGATTAAAGTT+TGG + chr3.3:3397881-3397900 MS.gene67744:CDS 50.0%
GGGTGACTCATGCTGTCATT+TGG + chr3.3:3399548-3399567 MS.gene67744:CDS 50.0%
GTTCATCAGGCGATTCACCT+TGG - chr3.3:3397136-3397155 None:intergenic 50.0%
! AAGCACTGCGGTATTTGGTC+GGG + chr3.3:3397744-3397763 MS.gene67744:CDS 50.0%
! CAAGCACTGCGGTATTTGGT+CGG + chr3.3:3397743-3397762 MS.gene67744:CDS 50.0%
! CTGTTCTGGGCATTGTTGCT+AGG + chr3.3:3400345-3400364 MS.gene67744:CDS 50.0%
! GGTTTGGTTGAAGCGCCATA+AGG + chr3.3:3396089-3396108 MS.gene67744:CDS 50.0%
! TCTATGGAGCTTGTTCGCGT+TGG + chr3.3:3396267-3396286 MS.gene67744:CDS 50.0%
! TTGGGCGTGTCGACAACAAT+AGG - chr3.3:3397089-3397108 None:intergenic 50.0%
ATTGAGTCGCTAAGGGCAGC+AGG + chr3.3:3397868-3397887 MS.gene67744:CDS 55.0%
CAGTGCCACAAAAACCGGCA+TGG + chr3.3:3396476-3396495 MS.gene67744:CDS 55.0%
CGTCTGTTTGTGCTGCGGTT+TGG + chr3.3:3396073-3396092 MS.gene67744:CDS 55.0%
CTTAGGGCCCAAGTTGCTTG+GGG + chr3.3:3398954-3398973 MS.gene67744:intron 55.0%
GACTTAGCCCCCAAGCAACT+TGG - chr3.3:3398965-3398984 None:intergenic 55.0%
GACTTAGGGCCCAAGTTGCT+TGG + chr3.3:3398952-3398971 MS.gene67744:intron 55.0%
GTTGCTTGGGGGCTAAGTCA+CGG + chr3.3:3398966-3398985 MS.gene67744:intron 55.0%
TCGAGTGGCTCCACTGCAAA+AGG + chr3.3:3398293-3398312 MS.gene67744:CDS 55.0%
TTAGGGCCCAAGTTGCTTGG+GGG + chr3.3:3398955-3398974 MS.gene67744:intron 55.0%
TTGAGTCGCTAAGGGCAGCA+GGG + chr3.3:3397869-3397888 MS.gene67744:CDS 55.0%
! CTATGAAGCGGCAAGCACTG+CGG + chr3.3:3397732-3397751 MS.gene67744:CDS 55.0%
!! CTTGGTGTCGCGGTCTATTG+TGG + chr3.3:3395928-3395947 MS.gene67744:CDS 55.0%
GTGGCTCCACTGCAAAAGGC+TGG + chr3.3:3398297-3398316 MS.gene67744:CDS 60.0%
! CGCAGTGCTTGCCGCTTCAT+AGG - chr3.3:3397734-3397753 None:intergenic 60.0%
! GCGGCAAGCACTGCGGTATT+TGG + chr3.3:3397739-3397758 MS.gene67744:CDS 60.0%
!! CCTTCTGAGGCAGCACCCTA+CGG - chr3.3:3398902-3398921 None:intergenic 60.0%
!! TAGTTGGGCGCTTGGTGTCG+CGG + chr3.3:3395918-3395937 MS.gene67744:CDS 60.0%
AGAAGGGCCCAAACGGCCCT+GGG + chr3.3:3398868-3398887 MS.gene67744:intron 65.0%
GCCCTCCAGAAGGGCCCAAA+CGG + chr3.3:3398861-3398880 MS.gene67744:intron 65.0%
GCCGTTTGGGCCCTTCTGGA+GGG - chr3.3:3398865-3398884 None:intergenic 65.0%
GCGTATGCCGCTGCTGCCTA+TGG + chr3.3:3397164-3397183 MS.gene67744:CDS 65.0%
! GGAGCTTGTTCGCGTTGGCC+AGG + chr3.3:3396272-3396291 MS.gene67744:CDS 65.0%
! GTTTGGGCCCTTCTGGAGGG+CGG - chr3.3:3398862-3398881 None:intergenic 65.0%
! TCTGAGGCAGCACCCTACGG+AGG - chr3.3:3398899-3398918 None:intergenic 65.0%
!! CCGTAGGGTGCTGCCTCAGA+AGG + chr3.3:3398899-3398918 MS.gene67744:intron 65.0%
AGGGCACACCGCCCTCCAGA+AGG + chr3.3:3398851-3398870 MS.gene67744:intron 70.0%
CAGAAGGGCCCAAACGGCCC+TGG + chr3.3:3398867-3398886 MS.gene67744:intron 70.0%
CAGGGCCGTTTGGGCCCTTC+TGG - chr3.3:3398869-3398888 None:intergenic 70.0%
GGCCGTTTGGGCCCTTCTGG+AGG - chr3.3:3398866-3398885 None:intergenic 70.0%
GGGCACACCGCCCTCCAGAA+GGG + chr3.3:3398852-3398871 MS.gene67744:intron 70.0%
ACCCTACGGAGGACGCGCCC+AGG - chr3.3:3398888-3398907 None:intergenic 75.0%
AGGACGCGCCCAGGGCCGTT+TGG - chr3.3:3398879-3398898 None:intergenic 75.0%
CCCTACGGAGGACGCGCCCA+GGG - chr3.3:3398887-3398906 None:intergenic 75.0%
CCCTGGGCGCGTCCTCCGTA+GGG + chr3.3:3398884-3398903 MS.gene67744:intron 75.0%
GGACGCGCCCAGGGCCGTTT+GGG - chr3.3:3398878-3398897 None:intergenic 75.0%
! GCCCTGGGCGCGTCCTCCGT+AGG + chr3.3:3398883-3398902 MS.gene67744:intron 80.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 3394887 3400539 3394887 ID=MS.gene67744
chr3.3 mRNA 3394887 3400539 3394887 ID=MS.gene67744.t1;Parent=MS.gene67744
chr3.3 exon 3394887 3396528 3394887 ID=MS.gene67744.t1.exon1;Parent=MS.gene67744.t1
chr3.3 CDS 3394887 3396528 3394887 ID=cds.MS.gene67744.t1;Parent=MS.gene67744.t1
chr3.3 exon 3396943 3397249 3396943 ID=MS.gene67744.t1.exon2;Parent=MS.gene67744.t1
chr3.3 CDS 3396943 3397249 3396943 ID=cds.MS.gene67744.t1;Parent=MS.gene67744.t1
chr3.3 exon 3397471 3398137 3397471 ID=MS.gene67744.t1.exon3;Parent=MS.gene67744.t1
chr3.3 CDS 3397471 3398137 3397471 ID=cds.MS.gene67744.t1;Parent=MS.gene67744.t1
chr3.3 exon 3398252 3398375 3398252 ID=MS.gene67744.t1.exon4;Parent=MS.gene67744.t1
chr3.3 CDS 3398252 3398375 3398252 ID=cds.MS.gene67744.t1;Parent=MS.gene67744.t1
chr3.3 exon 3398507 3398726 3398507 ID=MS.gene67744.t1.exon5;Parent=MS.gene67744.t1
chr3.3 CDS 3398507 3398726 3398507 ID=cds.MS.gene67744.t1;Parent=MS.gene67744.t1
chr3.3 exon 3399180 3399638 3399180 ID=MS.gene67744.t1.exon6;Parent=MS.gene67744.t1
chr3.3 CDS 3399180 3399638 3399180 ID=cds.MS.gene67744.t1;Parent=MS.gene67744.t1
chr3.3 exon 3400317 3400539 3400317 ID=MS.gene67744.t1.exon7;Parent=MS.gene67744.t1
chr3.3 CDS 3400317 3400539 3400317 ID=cds.MS.gene67744.t1;Parent=MS.gene67744.t1
Gene Sequence

>MS.gene67744

ATGGATTCTAAGAGGCCACTTTTGTTACAATCTCCACGAACACCAAATGATCAATATATTCCTACAATACCAGTTTTTCCTGAGCTACCAAAATCAAAGTCAAGTTCAACCAACACAGTAACATTTTCCGGTGTTGAGTTCGGTCAAGTTGAGAATAAAAACTCTTCAAACTCATCATCATCAAGCAAAAGTTCTATGTCTATTCATTCAATGGGTTCTAGCAAGAGGAACAATTCTGTAAGGGAAATGAGTAGTTTAAACCATTCAGGATCAAAAAGTACTGTGAGGTATGGTTCAAAAGGTGGTGGTGATTCTGAAGGGTTAACCATGTCACAAAGAGAACTTAGAGATGAAGATGCAAGATTGGTATATATCAATGATCCTGAGAAAACCAATGAGAATTTTGAGTTTTTCGGAAATTCAATTCGAACTGCTAAATACTCAATCCTTACTTTCATTCCAAGGAATTTGTTTGAACAGTTTCATAGAGTTGCTTATATATATTTTCTCATCATTGCTATTCTCAATCAGCTTCCTCAACTTGCAGTATTTGGAAGATATGTTTCGATTCTACCGTTGGCTTTTGTTCTGTTTGTTACTGGTGTGAAAGATGCTTTTGAGGATTGGAGGAGACACAATTCAGATAAAGTTGAGAATAACAGGTTAGCAACAATTTTGATGAATGACGGTAGTTTCATTGAGAAGAAATGGAAGGATATTCGGGTTGGTGAGATTGTAAAAATTAAAACAAATGAAACAATTCCTTGTGATATTGTTTTGTTATCAACTAGTGATCCAACTGGTGTTGCATATGTGCAAACTATTAATCTTGATGGTGAGTCTAATTTGAAGACTAGGTATGCGAAACAGGAGACAGGTTCAAAGGTTCAACCGAGGTATACTGGTTTGATTAAGTGTGAGAAACCGAATAGGAATATATATGGATTTATGGCGAATATGGAAATCGATGGTAAGAAGTTATCACTTGGATCAACCAACATTGTGCTTAGAGGATGTGAGCTTAAGAATACTAGTTGGGCGCTTGGTGTCGCGGTCTATTGTGGCCGCGAGACTAAAGCTATGCTCAACAATTCAGGAGCTCCATCGAAAAGAAGTAGGCTAGAGACACGGATGAATTACGAAATCATTATGCTGTCTTTCTTTCTTGTTGCATTGTGTACAATCACGTCTGTTTGTGCTGCGGTTTGGTTGAAGCGCCATAAGGACGAGTTGAATCTGTTGCCTTATTATAGGAAACTTGATTTTTCGAAGCCGGAAGTTGAAGACTATAAGTACTATGGATGGGGATTGGAAATCTTTTTCACATTCCTTATGTCAGTTATAGTTTACCAGGTCATGATTCCTATTGCTTTGTACATTTCTATGGAGCTTGTTCGCGTTGGCCAGGCCTATTTCATGATCGAAGACGATCGATTGTATGATGAGGCTACCAATACAAAGTTTCAGTGCAGAGCTTTGAATATTAATGAAGATTTGGGGCAAATTAAGTATGTGTTCTCAGATAAAACTGGTACACTTACTGAAAATAAGATGGAGTTTCAATGTGCAAGCATACGAGGAGTCGATTACAGTGCCACAAAAACCGGCATGGAGAATGAACTAGGTGAATACTCAGTGCAAGGTGAGATTGATTTCTTATATTTTTTTACTGATATATGTGTTATTATGTTCAAGTAAATTTTTTTTAACATTGCCTTTAATGCATCTGGTATTGTTTATAATTGAAATAAGATAAAGGATTATTTGTCAACCAAATTTAAACGGTTAAAACAGTTCAAATAGGTGGTTAATTACATTTGGTGGACAATTAACAGATATACGTCGTAGTTAATAAGTTGCATTAGTAGTTAATAAATTTTGCCATCTTATATACTCATTAACCGTATACTGAACGTAATTACCTACCTATTTAAGCTGCATGAACCACTTAGATTATTGTCGCAAAAGTTGTCAAATTTAGTTGTTCAAATAACAGAACTTGTATTTTTGTATAATTGAAATAACATTTTCTTTTTCTGTTATTTTCTACTCTCAGTTGATGGAAAGATCTTAAAGCCAAAGATGAAGGTGAAAGTTAGTCCAGAGCTTTTGCAATTGGCAAGAAATGGAGTTGAAAATGTGGAAGGAAAAAGGATTTATGATTTCTTTCTAGCACTTGCAACCTGCAATACTATTGTGCCTATTGTTGTCGACACGCCCAATCCTGATGTGAAGCTGTTAGATTACCAAGGTGAATCGCCTGATGAACAAGCATTGGCGTATGCCGCTGCTGCCTATGGTTTTATGCTTATCGAACGAACTTCTGGCCACATAGTCATTGATATTCATGGACAAAGACTCAAGTAAGTTTGTTATTACAAGCTTTCTATTCCATAATCGTAACTGCAGCTTATGTATTTTTAGGGTCTATTCTTTGATAATGAAATAATCACAAAAATTTGTAACGCGAGTGTCTAGGGTAGTGTCTGTCTAGTCTTGATAATGATAATGAAATCATCTTTAATGTGCTGCAAACAATGATTTTCCACATTCTAATGAATCTTTCTCATTATGAACATTGCAGGTTCAATGTCTTAGGTTTACACGAATTTGACAGTGATAGAAAAAGAATGTCGGTTATACTAGGCTACCCTGACAGTTCAGTAAAACTCTTTGTCAAAGGAGCAGACACAACCATGTTTAGTGTAATAGACAAATCGCACAACATGGACTTAATAAAAGCCACAGAAACTCATCTTCACTCTTACTCTTCCCTAGGTTTAAGAACACTTGTTATTGGAATGAAAGAACTAAGCACTTCAGAGTTTGAAGAATGGCATGCAGCCTATGAAGCGGCAAGCACTGCGGTATTTGGTCGGGCTGCAATGCTTAAAAAAATTTCAAACCATGTTGAAAGCAATGTTTCCATATTAGGAGCATCTGCTATCGAAGATAAACTTCAAAAAGGCGTCCCGGAAGCAATTGAGTCGCTAAGGGCAGCAGGGATTAAAGTTTGGGTTTTGACTGGTGACAAGCAAGAAACTGCTATATCTATTGGATTCTCATCAAAACTTTTGACAAGAAACATGACTCAAATTATTATTAATAGTAATAGTAAAGTGTCATGTAGAAAAAGTCTCAAAGATGCTCTTGAAAGGTCTAGAAAACTTGATGCAGTTGCAACACAGATAGCTTTGATTATTGATGGTGGAAGCCTTGTACACATACTCGACAGTGAACATGAAGAAGAGGTTAGTTTTATTATATCTTGTTAGAGAGTAATATTAAACATATCATTTACAATTTACATTGAATTTCTTGATGATGTTTTATTTGCTGATCATGGCTACTTCTGTTTGATTCAGTTGTTTCAACTTGCAAGTTTGTGTTCTGTCGTTCTTTGTTGTCGAGTGGCTCCACTGCAAAAGGCTGGTATTGTTTCCCTTGTGAAGAAGCGGACATCTGACATGACACTAGCCATCGGAGATGGTACGAGATCTTCTCTTGATTTGTTTCAACTTGTCAATTCCTTTCAATACATTCTTTACTAGTAAGATTTATGATTTGAACCGTATATTAGAGCGAAAAAACTGATGTGTATCCATGTGTTACAATTACAGGTGCTAATGATGTATCAATGATTCAAATGGCTGATGTTGGAGTTGGTATAAGTGGACAAGAGGGTAGGCAAGCTGTAATGGCATCAGATTTTGCAATGGGACAGTTTAGGTTTTTAGTTCCTCTCTTATTGATACATGGTCACTGGAATTATCAAAGGCTTGGTTACATGATACTATACAATTTTTACAGAAATGCAATCCTTGTTCTTGTCCTATTTTGGTAAGTCACAATCCAACAAATGGTTTATCATATCATATATGTTGTGTCTACGTGTCAATATCGTGTTTGATGTCTGTGTCAGTATCAGGCTTTTATAGATAATTGGACCGTTAATATATAATTAAGGGCACACCGCCCTCCAGAAGGGCCCAAACGGCCCTGGGCGCGTCCTCCGTAGGGTGCTGCCTCAGAAGGCTTCTAAAAGCATCTAGACGCTCTAAACATGACTTAGGGCCCAAGTTGCTTGGGGGCTAAGTCACGGAAAAACAAGCTATATACCCCCTTGAGATCATTCTCAAGGCATGACCAAAAGAGACTAAACCCTAGTTTCAGATATTGTACTCACTGCAAGTACAATAATAATTGTCTTTTGATATATCTTTCTATTTCATCTTCTCCTCAAAATTTTAACATATGAATAATAATAATTTGTTCTGTGCCTTTGTTTTTTAGGTATGTTCTCTACACTGCCTTCACTTCAACAACTGCAATAAATGAATGGAGCTCCACATTGTACTCAATAATCTACAGTGCACTACCAACTATCATTGTTGGAATTCTTGACAAAGATCTTAGTAGAAGCACTCTCCTAAAGTATCCTCAACTTTATAGTGCTGGACAAAGAGATGAAGCCTACAACAAGAAATTGTTTATGTTAACAATGGTTGATACTTTGTGGCAAAGCATGGTTGTATTTTGGCCTCCACTCTTTGCATATTGGAAAAGTACTATTGATATAGCAAGCATAGGAGATCTTTGGACTCTTGCAGTGGTTATTTTGGTCAATTTACATTTGGCTATGGATGTTATTAGATGGTATTGGGTGACTCATGCTGTCATTTGGGGATCTATTGCTGCTACATTCATTTCTGTCATGATCATTGATGCTATACCTCAACTTCCTGGTTACTGGTATGTATTCACTATCTTTTTCTCTCTTTATTTGCTAGAATAGAAAATTCAACTCTAGAGTAAACCTATTAATAAATACGAACGAATCTAACGATTGTTCACATAGTTTGGCCAATTGCGTCTATATCTTTGAAAGTAGAGTGAATGTTTTTGTTTTTTTTTTGTCAGGTAGCCTAGTGGCTAGAATTCACCTTATAAGGTGTATATTATACAATAGTTAGAATTATAAAGTAGTGTTAATAATACGGTCCATATTACAAAAATAACCTTGAAGATAGAAAATTTAAATCAGAAAATAACATTTTAGAAAATGAAAAATAGAAAATATTTTTCAAAATCAAACAAGTCCTTGAGAAATATTTAGAAGAAACCTTTTTAGTAAAACCTATTCTAAGTGATTTTTCTACATTTTTTATTTTCAGTGACACAATTTGATCCATGTAACCAGTATCAACTTTAAGATAATATTTGGTGGTTGTTGTCATTGTTTTAATACAAATCATAGAAAAACCATGTCAACTTATAAATAAATAAAATTGCCACCATTCTATACATCTTAAATTTGATAACCTTTGCTACCATACTTTATATGCATTTAAAACCTTTGCAATTATACATTGCTTTTTTAATTTATATATAGACACTAATCTTTGCATTTTCCTAACTTTGACATTGCAGGGCCTTCTTTCATGTTTCAAGTACTGGACTGTTCTGGGCATTGTTGCTAGGAATTGTGATCACAGCATTGCTTCCACGTTTGGTTGTAAAATATATTTATCAATATTATTTTCCTAGTGATATTCAAATTTCTAGAGAAGCTGAAAAGATGAGAGAATATCAAAGAGTTGCTGAAAATGGACAAATAGAAATGCTTCCTATCTCATATCATCAACCAAGATAA
Protein sequence

>MS.gene67744.t1

MDSKRPLLLQSPRTPNDQYIPTIPVFPELPKSKSSSTNTVTFSGVEFGQVENKNSSNSSSSSKSSMSIHSMGSSKRNNSVREMSSLNHSGSKSTVRYGSKGGGDSEGLTMSQRELRDEDARLVYINDPEKTNENFEFFGNSIRTAKYSILTFIPRNLFEQFHRVAYIYFLIIAILNQLPQLAVFGRYVSILPLAFVLFVTGVKDAFEDWRRHNSDKVENNRLATILMNDGSFIEKKWKDIRVGEIVKIKTNETIPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETGSKVQPRYTGLIKCEKPNRNIYGFMANMEIDGKKLSLGSTNIVLRGCELKNTSWALGVAVYCGRETKAMLNNSGAPSKRSRLETRMNYEIIMLSFFLVALCTITSVCAAVWLKRHKDELNLLPYYRKLDFSKPEVEDYKYYGWGLEIFFTFLMSVIVYQVMIPIALYISMELVRVGQAYFMIEDDRLYDEATNTKFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIRGVDYSATKTGMENELGEYSVQVDGKILKPKMKVKVSPELLQLARNGVENVEGKRIYDFFLALATCNTIVPIVVDTPNPDVKLLDYQGESPDEQALAYAAAAYGFMLIERTSGHIVIDIHGQRLKFNVLGLHEFDSDRKRMSVILGYPDSSVKLFVKGADTTMFSVIDKSHNMDLIKATETHLHSYSSLGLRTLVIGMKELSTSEFEEWHAAYEAASTAVFGRAAMLKKISNHVESNVSILGASAIEDKLQKGVPEAIESLRAAGIKVWVLTGDKQETAISIGFSSKLLTRNMTQIIINSNSKVSCRKSLKDALERSRKLDAVATQIALIIDGGSLVHILDSEHEEELFQLASLCSVVLCCRVAPLQKAGIVSLVKKRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLIHGHWNYQRLGYMILYNFYRNAILVLVLFWYVLYTAFTSTTAINEWSSTLYSIIYSALPTIIVGILDKDLSRSTLLKYPQLYSAGQRDEAYNKKLFMLTMVDTLWQSMVVFWPPLFAYWKSTIDIASIGDLWTLAVVILVNLHLAMDVIRWYWVTHAVIWGSIAATFISVMIIDAIPQLPGYWAFFHVSSTGLFWALLLGIVITALLPRLVVKYIYQYYFPSDIQISREAEKMREYQRVAENGQIEMLPISYHQPR