Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062071.t1 | XP_024632340.1 | 95.7 | 161 | 7 | 0 | 1 | 161 | 1 | 161 | 6.10E-81 | 310.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062071.t1 | Q9SX65 | 64.1 | 156 | 54 | 1 | 6 | 161 | 3 | 156 | 9.7e-51 | 201.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062071.t1 | I3S426 | 95.7 | 161 | 7 | 0 | 1 | 161 | 1 | 161 | 4.4e-81 | 310.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene062071 | -0.829577 | 4.76E-55 | -1.69E-46 |
| MS.gene049217 | MS.gene062071 | -0.820417 | 6.94E-53 | -1.69E-46 |
| MS.gene049222 | MS.gene062071 | -0.820189 | 7.82E-53 | -1.69E-46 |
| MS.gene049232 | MS.gene062071 | -0.829855 | 4.08E-55 | -1.69E-46 |
| MS.gene049259 | MS.gene062071 | 0.871303 | 7.57E-67 | -1.69E-46 |
| MS.gene049281 | MS.gene062071 | 0.830776 | 2.43E-55 | -1.69E-46 |
| MS.gene049285 | MS.gene062071 | -0.82132 | 4.30E-53 | -1.69E-46 |
| MS.gene049320 | MS.gene062071 | -0.858103 | 1.04E-62 | -1.69E-46 |
| MS.gene049402 | MS.gene062071 | 0.807024 | 6.19E-50 | -1.69E-46 |
| MS.gene049483 | MS.gene062071 | 0.809035 | 2.31E-50 | -1.69E-46 |
| MS.gene049611 | MS.gene062071 | 0.853943 | 1.71E-61 | -1.69E-46 |
| MS.gene049633 | MS.gene062071 | -0.819327 | 1.23E-52 | -1.69E-46 |
| MS.gene049634 | MS.gene062071 | 0.837301 | 5.63E-57 | -1.69E-46 |
| MS.gene049710 | MS.gene062071 | 0.801833 | 7.47E-49 | -1.69E-46 |
| MS.gene04986 | MS.gene062071 | 0.8038 | 2.93E-49 | -1.69E-46 |
| MS.gene050082 | MS.gene062071 | 0.847235 | 1.32E-59 | -1.69E-46 |
| MS.gene05010 | MS.gene062071 | -0.819277 | 1.26E-52 | -1.69E-46 |
| MS.gene05015 | MS.gene062071 | 0.828725 | 7.66E-55 | -1.69E-46 |
| MS.gene050163 | MS.gene062071 | -0.810419 | 1.16E-50 | -1.69E-46 |
| MS.gene050165 | MS.gene062071 | -0.824496 | 7.82E-54 | -1.69E-46 |
| MS.gene050170 | MS.gene062071 | -0.807193 | 5.70E-50 | -1.69E-46 |
| MS.gene050173 | MS.gene062071 | 0.828291 | 9.75E-55 | -1.69E-46 |
| MS.gene050216 | MS.gene062071 | -0.840143 | 1.04E-57 | -1.69E-46 |
| MS.gene050323 | MS.gene062071 | -0.826088 | 3.29E-54 | -1.69E-46 |
| MS.gene050333 | MS.gene062071 | -0.836016 | 1.20E-56 | -1.69E-46 |
| MS.gene050363 | MS.gene062071 | 0.807546 | 4.80E-50 | -1.69E-46 |
| MS.gene050380 | MS.gene062071 | 0.800935 | 1.14E-48 | -1.69E-46 |
| MS.gene050381 | MS.gene062071 | 0.892218 | 1.94E-74 | -1.69E-46 |
| MS.gene050496 | MS.gene062071 | -0.834034 | 3.78E-56 | -1.69E-46 |
| MS.gene050504 | MS.gene062071 | -0.858534 | 7.72E-63 | -1.69E-46 |
| MS.gene050518 | MS.gene062071 | -0.826135 | 3.20E-54 | -1.69E-46 |
| MS.gene050577 | MS.gene062071 | -0.820248 | 7.58E-53 | -1.69E-46 |
| MS.gene050612 | MS.gene062071 | -0.871487 | 6.58E-67 | -1.69E-46 |
| MS.gene050662 | MS.gene062071 | -0.806672 | 7.34E-50 | -1.69E-46 |
| MS.gene050675 | MS.gene062071 | -0.832127 | 1.13E-55 | -1.69E-46 |
| MS.gene050699 | MS.gene062071 | -0.818182 | 2.24E-52 | -1.69E-46 |
| MS.gene050772 | MS.gene062071 | -0.806205 | 9.21E-50 | -1.69E-46 |
| MS.gene05079 | MS.gene062071 | 0.802585 | 5.23E-49 | -1.69E-46 |
| MS.gene05080 | MS.gene062071 | -0.806667 | 7.36E-50 | -1.69E-46 |
| MS.gene050832 | MS.gene062071 | 0.81996 | 8.83E-53 | -1.69E-46 |
| MS.gene050833 | MS.gene062071 | 0.822198 | 2.69E-53 | -1.69E-46 |
| MS.gene050868 | MS.gene062071 | -0.856603 | 2.88E-62 | -1.69E-46 |
| MS.gene050871 | MS.gene062071 | -0.854478 | 1.20E-61 | -1.69E-46 |
| MS.gene050883 | MS.gene062071 | 0.877755 | 4.87E-69 | -1.69E-46 |
| MS.gene050986 | MS.gene062071 | -0.83672 | 7.93E-57 | -1.69E-46 |
| MS.gene051044 | MS.gene062071 | 0.871233 | 7.99E-67 | -1.69E-46 |
| MS.gene05104 | MS.gene062071 | 0.836425 | 9.43E-57 | -1.69E-46 |
| MS.gene051127 | MS.gene062071 | 0.882894 | 7.10E-71 | -1.69E-46 |
| MS.gene051138 | MS.gene062071 | 0.875253 | 3.56E-68 | -1.69E-46 |
| MS.gene051142 | MS.gene062071 | 0.802146 | 6.44E-49 | -1.69E-46 |
| MS.gene051268 | MS.gene062071 | -0.817018 | 4.10E-52 | -1.69E-46 |
| MS.gene051364 | MS.gene062071 | 0.835982 | 1.22E-56 | -1.69E-46 |
| MS.gene051366 | MS.gene062071 | 0.834543 | 2.82E-56 | -1.69E-46 |
| MS.gene051367 | MS.gene062071 | 0.819433 | 1.16E-52 | -1.69E-46 |
| MS.gene051410 | MS.gene062071 | 0.812071 | 5.10E-51 | -1.69E-46 |
| MS.gene051422 | MS.gene062071 | 0.827762 | 1.31E-54 | -1.69E-46 |
| MS.gene051632 | MS.gene062071 | 0.809275 | 2.05E-50 | -1.69E-46 |
| MS.gene051651 | MS.gene062071 | 0.812865 | 3.42E-51 | -1.69E-46 |
| MS.gene051810 | MS.gene062071 | -0.800048 | 1.73E-48 | -1.69E-46 |
| MS.gene051863 | MS.gene062071 | 0.84732 | 1.25E-59 | -1.69E-46 |
| MS.gene051946 | MS.gene062071 | 0.837435 | 5.21E-57 | -1.69E-46 |
| MS.gene052089 | MS.gene062071 | 0.819482 | 1.14E-52 | -1.69E-46 |
| MS.gene052164 | MS.gene062071 | -0.832452 | 9.38E-56 | -1.69E-46 |
| MS.gene052211 | MS.gene062071 | 0.804121 | 2.51E-49 | -1.69E-46 |
| MS.gene052482 | MS.gene062071 | -0.842961 | 1.88E-58 | -1.69E-46 |
| MS.gene052486 | MS.gene062071 | -0.848491 | 5.93E-60 | -1.69E-46 |
| MS.gene052566 | MS.gene062071 | 0.809988 | 1.44E-50 | -1.69E-46 |
| MS.gene052802 | MS.gene062071 | 0.826369 | 2.82E-54 | -1.69E-46 |
| MS.gene052916 | MS.gene062071 | -0.820449 | 6.82E-53 | -1.69E-46 |
| MS.gene052966 | MS.gene062071 | -0.801844 | 7.43E-49 | -1.69E-46 |
| MS.gene053069 | MS.gene062071 | 0.821432 | 4.05E-53 | -1.69E-46 |
| MS.gene053203 | MS.gene062071 | -0.81007 | 1.38E-50 | -1.69E-46 |
| MS.gene053420 | MS.gene062071 | 0.905939 | 2.52E-80 | -1.69E-46 |
| MS.gene053488 | MS.gene062071 | 0.859205 | 4.86E-63 | -1.69E-46 |
| MS.gene053549 | MS.gene062071 | 0.814603 | 1.42E-51 | -1.69E-46 |
| MS.gene053561 | MS.gene062071 | 0.876951 | 9.28E-69 | -1.69E-46 |
| MS.gene053574 | MS.gene062071 | -0.803476 | 3.42E-49 | -1.69E-46 |
| MS.gene053826 | MS.gene062071 | 0.832205 | 1.08E-55 | -1.69E-46 |
| MS.gene053887 | MS.gene062071 | 0.821381 | 4.16E-53 | -1.69E-46 |
| MS.gene054054 | MS.gene062071 | 0.818445 | 1.95E-52 | -1.69E-46 |
| MS.gene054056 | MS.gene062071 | 0.862632 | 4.42E-64 | -1.69E-46 |
| MS.gene054595 | MS.gene062071 | -0.805178 | 1.51E-49 | -1.69E-46 |
| MS.gene054616 | MS.gene062071 | 0.826619 | 2.46E-54 | -1.69E-46 |
| MS.gene054642 | MS.gene062071 | -0.831903 | 1.28E-55 | -1.69E-46 |
| MS.gene054706 | MS.gene062071 | 0.811971 | 5.36E-51 | -1.69E-46 |
| MS.gene054707 | MS.gene062071 | 0.81244 | 4.24E-51 | -1.69E-46 |
| MS.gene054708 | MS.gene062071 | 0.841541 | 4.46E-58 | -1.69E-46 |
| MS.gene05470 | MS.gene062071 | -0.818646 | 1.76E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene062071 | -0.840016 | 1.12E-57 | -1.69E-46 |
| MS.gene054959 | MS.gene062071 | 0.815225 | 1.03E-51 | -1.69E-46 |
| MS.gene055124 | MS.gene062071 | 0.847303 | 1.26E-59 | -1.69E-46 |
| MS.gene055154 | MS.gene062071 | 0.896293 | 4.24E-76 | -1.69E-46 |
| MS.gene055202 | MS.gene062071 | 0.829071 | 6.32E-55 | -1.69E-46 |
| MS.gene055362 | MS.gene062071 | -0.849357 | 3.41E-60 | -1.69E-46 |
| MS.gene055502 | MS.gene062071 | -0.848411 | 6.24E-60 | -1.69E-46 |
| MS.gene055549 | MS.gene062071 | 0.820293 | 7.40E-53 | -1.69E-46 |
| MS.gene055550 | MS.gene062071 | 0.816814 | 4.55E-52 | -1.69E-46 |
| MS.gene055577 | MS.gene062071 | -0.820538 | 6.51E-53 | -1.69E-46 |
| MS.gene055748 | MS.gene062071 | -0.822806 | 1.94E-53 | -1.69E-46 |
| MS.gene055750 | MS.gene062071 | -0.849684 | 2.76E-60 | -1.69E-46 |
| MS.gene055751 | MS.gene062071 | -0.840753 | 7.19E-58 | -1.69E-46 |
| MS.gene055776 | MS.gene062071 | -0.827191 | 1.79E-54 | -1.69E-46 |
| MS.gene05589 | MS.gene062071 | -0.850319 | 1.83E-60 | -1.69E-46 |
| MS.gene055942 | MS.gene062071 | 0.879095 | 1.65E-69 | -1.69E-46 |
| MS.gene056224 | MS.gene062071 | 0.844158 | 8.99E-59 | -1.69E-46 |
| MS.gene056310 | MS.gene062071 | 0.830103 | 3.54E-55 | -1.69E-46 |
| MS.gene056311 | MS.gene062071 | 0.867108 | 1.75E-65 | -1.69E-46 |
| MS.gene056313 | MS.gene062071 | 0.815344 | 9.70E-52 | -1.69E-46 |
| MS.gene056504 | MS.gene062071 | -0.863656 | 2.13E-64 | -1.69E-46 |
| MS.gene056510 | MS.gene062071 | -0.816486 | 5.40E-52 | -1.69E-46 |
| MS.gene056657 | MS.gene062071 | -0.842229 | 2.94E-58 | -1.69E-46 |
| MS.gene056692 | MS.gene062071 | -0.816446 | 5.51E-52 | -1.69E-46 |
| MS.gene056761 | MS.gene062071 | 0.820058 | 8.38E-53 | -1.69E-46 |
| MS.gene056856 | MS.gene062071 | 0.855437 | 6.31E-62 | -1.69E-46 |
| MS.gene056857 | MS.gene062071 | 0.810283 | 1.25E-50 | -1.69E-46 |
| MS.gene057014 | MS.gene062071 | 0.855039 | 8.24E-62 | -1.69E-46 |
| MS.gene057549 | MS.gene062071 | 0.846728 | 1.81E-59 | -1.69E-46 |
| MS.gene058068 | MS.gene062071 | 0.851119 | 1.09E-60 | -1.69E-46 |
| MS.gene058093 | MS.gene062071 | 0.82805 | 1.12E-54 | -1.69E-46 |
| MS.gene058099 | MS.gene062071 | 0.886015 | 4.94E-72 | -1.69E-46 |
| MS.gene058108 | MS.gene062071 | 0.817471 | 3.24E-52 | -1.69E-46 |
| MS.gene058109 | MS.gene062071 | 0.865137 | 7.34E-65 | -1.69E-46 |
| MS.gene058111 | MS.gene062071 | 0.872266 | 3.63E-67 | -1.69E-46 |
| MS.gene058117 | MS.gene062071 | 0.842697 | 2.21E-58 | -1.69E-46 |
| MS.gene058157 | MS.gene062071 | -0.813853 | 2.07E-51 | -1.69E-46 |
| MS.gene058171 | MS.gene062071 | 0.883599 | 3.92E-71 | -1.69E-46 |
| MS.gene058173 | MS.gene062071 | 0.877306 | 6.99E-69 | -1.69E-46 |
| MS.gene058175 | MS.gene062071 | 0.888059 | 8.26E-73 | -1.69E-46 |
| MS.gene058268 | MS.gene062071 | 0.858839 | 6.25E-63 | -1.69E-46 |
| MS.gene058269 | MS.gene062071 | 0.858808 | 6.39E-63 | -1.69E-46 |
| MS.gene058334 | MS.gene062071 | 0.833623 | 4.80E-56 | -1.69E-46 |
| MS.gene058349 | MS.gene062071 | 0.814171 | 1.76E-51 | -1.69E-46 |
| MS.gene05837 | MS.gene062071 | -0.816246 | 6.11E-52 | -1.69E-46 |
| MS.gene058419 | MS.gene062071 | -0.839913 | 1.19E-57 | -1.69E-46 |
| MS.gene058493 | MS.gene062071 | 0.874959 | 4.49E-68 | -1.69E-46 |
| MS.gene058494 | MS.gene062071 | 0.862956 | 3.51E-64 | -1.69E-46 |
| MS.gene058496 | MS.gene062071 | 0.829741 | 4.34E-55 | -1.69E-46 |
| MS.gene058603 | MS.gene062071 | 0.84138 | 4.92E-58 | -1.69E-46 |
| MS.gene058628 | MS.gene062071 | 0.840991 | 6.23E-58 | -1.69E-46 |
| MS.gene058629 | MS.gene062071 | 0.825618 | 4.25E-54 | -1.69E-46 |
| MS.gene058630 | MS.gene062071 | 0.833095 | 6.49E-56 | -1.69E-46 |
| MS.gene058773 | MS.gene062071 | -0.813349 | 2.68E-51 | -1.69E-46 |
| MS.gene058840 | MS.gene062071 | 0.822815 | 1.94E-53 | -1.69E-46 |
| MS.gene05884 | MS.gene062071 | 0.808391 | 3.17E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene062071 | -0.867082 | 1.78E-65 | -1.69E-46 |
| MS.gene059037 | MS.gene062071 | 0.825886 | 3.67E-54 | -1.69E-46 |
| MS.gene059038 | MS.gene062071 | 0.818466 | 1.93E-52 | -1.69E-46 |
| MS.gene059045 | MS.gene062071 | 0.858353 | 8.74E-63 | -1.69E-46 |
| MS.gene05913 | MS.gene062071 | -0.802958 | 4.38E-49 | -1.69E-46 |
| MS.gene059223 | MS.gene062071 | 0.834206 | 3.43E-56 | -1.69E-46 |
| MS.gene059367 | MS.gene062071 | -0.808557 | 2.92E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene062071 | -0.831276 | 1.83E-55 | -1.69E-46 |
| MS.gene059690 | MS.gene062071 | 0.868682 | 5.44E-66 | -1.69E-46 |
| MS.gene059691 | MS.gene062071 | 0.830251 | 3.26E-55 | -1.69E-46 |
| MS.gene059694 | MS.gene062071 | 0.866296 | 3.16E-65 | -1.69E-46 |
| MS.gene059697 | MS.gene062071 | 0.859989 | 2.82E-63 | -1.69E-46 |
| MS.gene059699 | MS.gene062071 | 0.809077 | 2.26E-50 | -1.69E-46 |
| MS.gene059701 | MS.gene062071 | 0.808461 | 3.06E-50 | -1.69E-46 |
| MS.gene059703 | MS.gene062071 | 0.830627 | 2.64E-55 | -1.69E-46 |
| MS.gene059718 | MS.gene062071 | -0.81723 | 3.67E-52 | -1.69E-46 |
| MS.gene059865 | MS.gene062071 | -0.870907 | 1.02E-66 | -1.69E-46 |
| MS.gene059916 | MS.gene062071 | 0.817502 | 3.19E-52 | -1.69E-46 |
| MS.gene059943 | MS.gene062071 | 0.803964 | 2.71E-49 | -1.69E-46 |
| MS.gene060405 | MS.gene062071 | 0.807257 | 5.52E-50 | -1.69E-46 |
| MS.gene060593 | MS.gene062071 | 0.805347 | 1.40E-49 | -1.69E-46 |
| MS.gene060595 | MS.gene062071 | 0.834649 | 2.65E-56 | -1.69E-46 |
| MS.gene060703 | MS.gene062071 | -0.830624 | 2.64E-55 | -1.69E-46 |
| MS.gene060762 | MS.gene062071 | -0.841117 | 5.77E-58 | -1.69E-46 |
| MS.gene060778 | MS.gene062071 | -0.831423 | 1.68E-55 | -1.69E-46 |
| MS.gene06077 | MS.gene062071 | -0.856995 | 2.21E-62 | -1.69E-46 |
| MS.gene060823 | MS.gene062071 | 0.812331 | 4.47E-51 | -1.69E-46 |
| MS.gene06084 | MS.gene062071 | 0.808288 | 3.33E-50 | -1.69E-46 |
| MS.gene060982 | MS.gene062071 | -0.840277 | 9.58E-58 | -1.69E-46 |
| MS.gene061044 | MS.gene062071 | 0.829981 | 3.80E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062071.t1 | MTR_2g045080 | 90.058 | 171 | 7 | 1 | 1 | 161 | 1 | 171 | 2.25e-111 | 313 |
| MS.gene062071.t1 | MTR_2g045050 | 75.776 | 161 | 39 | 0 | 1 | 161 | 1 | 161 | 9.95e-92 | 263 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062071.t1 | AT1G48320 | 64.103 | 156 | 54 | 1 | 6 | 161 | 3 | 156 | 6.91e-70 | 208 |
| MS.gene062071.t1 | AT5G48950 | 55.333 | 150 | 64 | 2 | 11 | 157 | 3 | 152 | 3.08e-58 | 179 |
| MS.gene062071.t1 | AT5G48950 | 60.185 | 108 | 41 | 1 | 11 | 116 | 3 | 110 | 4.03e-43 | 139 |
Find 21 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTTACCCCTTCATACATT+TGG | 0.265244 | 2.3:-45220171 | MS.gene062071:CDS |
| AGCATTCACCTGAATGGTTT+TGG | 0.290561 | 2.3:+45219448 | None:intergenic |
| GTGTCATCAAACAAAGTTTC+TGG | 0.297801 | 2.3:-45220132 | MS.gene062071:CDS |
| AAAACCAAAAGCTGCTGATT+TGG | 0.309085 | 2.3:-45220193 | MS.gene062071:CDS |
| CCTCCATGAAGCACACTAAA+AGG | 0.309265 | 2.3:+45219626 | None:intergenic |
| AAGTGTTGCCAAAACCATTC+AGG | 0.313827 | 2.3:-45219456 | MS.gene062071:intron |
| AAATCCAAATCAGCAGCTTT+TGG | 0.333199 | 2.3:+45220189 | None:intergenic |
| ATTTACCCCTTCATACATTT+GGG | 0.334094 | 2.3:-45220170 | MS.gene062071:CDS |
| TGCATACTTCTTTAGCATAT+TGG | 0.339467 | 2.3:+45218802 | None:intergenic |
| TGTGGGTATAAAAGAGTTGC+TGG | 0.445165 | 2.3:-45219551 | MS.gene062071:CDS |
| AAGAGGAGCATTCACCTGAA+TGG | 0.482948 | 2.3:+45219442 | None:intergenic |
| GCTGAAGCTCTTGCAAGTAT+TGG | 0.487992 | 2.3:-45219587 | MS.gene062071:CDS |
| AGGTGTGGGATGTGAAAATC+TGG | 0.507075 | 2.3:-45218925 | MS.gene062071:CDS |
| ACTCAAACCCAAATGTATGA+AGG | 0.525757 | 2.3:+45220163 | None:intergenic |
| TTGGAGCACATGTTGCTTGT+GGG | 0.528993 | 2.3:-45219568 | MS.gene062071:CDS |
| CTCAAACCCAAATGTATGAA+GGG | 0.530132 | 2.3:+45220164 | None:intergenic |
| CATTTGAAATCAGCAATGCT+TGG | 0.536764 | 2.3:-45219509 | MS.gene062071:CDS |
| AGTCACTGAAAAGTGTTGCC+AGG | 0.553880 | 2.3:-45220100 | MS.gene062071:intron |
| GGAGGACCATCAATCATCAT+CGG | 0.605735 | 2.3:-45220217 | MS.gene062071:CDS |
| ATTGGAGCACATGTTGCTTG+TGG | 0.616187 | 2.3:-45219569 | MS.gene062071:CDS |
| TCAAACCCAAATGTATGAAG+GGG | 0.634737 | 2.3:+45220165 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAGAGAATTTATATAAA+TGG | + | chr2.3:45219722-45219741 | None:intergenic | 10.0% |
| !! | ATTTATATAAATTCTCTTAT+TGG | - | chr2.3:45219721-45219740 | MS.gene062071:intron | 10.0% |
| !! | AAAAATTTAAACACAACATT+TGG | + | chr2.3:45219994-45220013 | None:intergenic | 15.0% |
| !!! | ATATCATCTCATATTTATTT+TGG | - | chr2.3:45219812-45219831 | MS.gene062071:intron | 15.0% |
| !! | ATATATGAACAAGAAAAAGT+AGG | - | chr2.3:45219330-45219349 | MS.gene062071:intron | 20.0% |
| !! | TTCAATATAATGATATGTGT+CGG | + | chr2.3:45219186-45219205 | None:intergenic | 20.0% |
| !!! | ACTTTGAGAAAAATATAAAG+AGG | + | chr2.3:45219590-45219609 | None:intergenic | 20.0% |
| !!! | TTTACTTGCTTACATTTTTT+GGG | - | chr2.3:45220011-45220030 | MS.gene062071:intron | 20.0% |
| !!! | TTTTACTTGCTTACATTTTT+TGG | - | chr2.3:45220010-45220029 | MS.gene062071:intron | 20.0% |
| ! | AATTAGGAGTGATTTGATAT+TGG | - | chr2.3:45219354-45219373 | MS.gene062071:intron | 25.0% |
| ! | ACAAGAAAAAGTAGGTAATT+AGG | - | chr2.3:45219338-45219357 | MS.gene062071:intron | 25.0% |
| ! | ACGAAAAACTATGAAAACAA+AGG | + | chr2.3:45218944-45218963 | None:intergenic | 25.0% |
| ! | ATCATGATTGGTATAATCAT+TGG | + | chr2.3:45219879-45219898 | None:intergenic | 25.0% |
| ! | CACATAAAGATAAATCGTTT+GGG | + | chr2.3:45219652-45219671 | None:intergenic | 25.0% |
| ! | CGAAAAACTATGAAAACAAA+GGG | + | chr2.3:45218943-45218962 | None:intergenic | 25.0% |
| ! | CGGATTCTGATTTAAATAAT+TGG | + | chr2.3:45219617-45219636 | None:intergenic | 25.0% |
| ! | GCTATAAAGTAAGTAAAACA+TGG | - | chr2.3:45219853-45219872 | MS.gene062071:intron | 25.0% |
| ! | TCACATAAAGATAAATCGTT+TGG | + | chr2.3:45219653-45219672 | None:intergenic | 25.0% |
| ! | TTGAGTATGTTACATAGTTA+TGG | - | chr2.3:45219274-45219293 | MS.gene062071:intron | 25.0% |
| !! | AAATTCTCTTATTGGTGATT+TGG | - | chr2.3:45219729-45219748 | MS.gene062071:intron | 25.0% |
| !! | TGTTTTACTTACTTTATAGC+CGG | + | chr2.3:45219853-45219872 | None:intergenic | 25.0% |
| !!! | CTCATATTTATTTTGGTACT+TGG | - | chr2.3:45219819-45219838 | MS.gene062071:intron | 25.0% |
| !!! | GTTTTGTTTTTTGAGTTTGA+AGG | + | chr2.3:45220122-45220141 | None:intergenic | 25.0% |
| !!! | TTACTTGCTTACATTTTTTG+GGG | - | chr2.3:45220012-45220031 | MS.gene062071:intron | 25.0% |
| AATTAAGCACATATACTCCT+TGG | - | chr2.3:45219008-45219027 | MS.gene062071:intron | 30.0% | |
| ATTTACCCCTTCATACATTT+GGG | - | chr2.3:45218842-45218861 | MS.gene062071:CDS | 30.0% | |
| GACAATGCATAAAATATGCA+AGG | - | chr2.3:45219079-45219098 | MS.gene062071:intron | 30.0% | |
| TGCATACTTCTTTAGCATAT+TGG | + | chr2.3:45220213-45220232 | None:intergenic | 30.0% | |
| TTGAAGACAATGTCACTAAT+TGG | - | chr2.3:45219687-45219706 | MS.gene062071:intron | 30.0% | |
| !!! | TTTTGGGGTTAGAATTGTTT+GGG | - | chr2.3:45220027-45220046 | MS.gene062071:intron | 30.0% |
| !!! | TTTTTGGGGTTAGAATTGTT+TGG | - | chr2.3:45220026-45220045 | MS.gene062071:intron | 30.0% |
| AAAGAGACATGATCATGTGT+TGG | - | chr2.3:45219130-45219149 | MS.gene062071:intron | 35.0% | |
| ACAATGTCACTAATTGGCTA+TGG | - | chr2.3:45219693-45219712 | MS.gene062071:intron | 35.0% | |
| ACATGATCATGTCTAATCCA+AGG | + | chr2.3:45219028-45219047 | None:intergenic | 35.0% | |
| ACTCAAACCCAAATGTATGA+AGG | + | chr2.3:45218852-45218871 | None:intergenic | 35.0% | |
| CTCAAACCCAAATGTATGAA+GGG | + | chr2.3:45218851-45218870 | None:intergenic | 35.0% | |
| GATTTACCCCTTCATACATT+TGG | - | chr2.3:45218841-45218860 | MS.gene062071:CDS | 35.0% | |
| GTGTCATCAAACAAAGTTTC+TGG | - | chr2.3:45218880-45218899 | MS.gene062071:CDS | 35.0% | |
| TCAAACCCAAATGTATGAAG+GGG | + | chr2.3:45218850-45218869 | None:intergenic | 35.0% | |
| TGCATAAAATATGCAAGGTC+CGG | - | chr2.3:45219084-45219103 | MS.gene062071:intron | 35.0% | |
| ! | AAAACCAAAAGCTGCTGATT+TGG | - | chr2.3:45218819-45218838 | MS.gene062071:CDS | 35.0% |
| ! | AAATCCAAATCAGCAGCTTT+TGG | + | chr2.3:45218826-45218845 | None:intergenic | 35.0% |
| ! | ACTTTTCAGTGACTTGAAGA+TGG | + | chr2.3:45218906-45218925 | None:intergenic | 35.0% |
| ! | ATGATCATGTCTCTTTTTGG+TGG | + | chr2.3:45219126-45219145 | None:intergenic | 35.0% |
| ! | CACATGATCATGTCTCTTTT+TGG | + | chr2.3:45219129-45219148 | None:intergenic | 35.0% |
| ! | CATTTGAAATCAGCAATGCT+TGG | - | chr2.3:45219503-45219522 | MS.gene062071:CDS | 35.0% |
| !! | TCTTTTGCATAATCTGGAAC+AGG | + | chr2.3:45220185-45220204 | None:intergenic | 35.0% |
| !!! | ATGGTTTTGGCAACACTTAA+AGG | + | chr2.3:45219554-45219573 | None:intergenic | 35.0% |
| !!! | TGGTTTTGGCAACACTTAAA+GGG | + | chr2.3:45219553-45219572 | None:intergenic | 35.0% |
| ACACGAACACCAACAAAACA+CGG | + | chr2.3:45219254-45219273 | None:intergenic | 40.0% | |
| AGTTGAGCTCGAATCATGAT+TGG | + | chr2.3:45219891-45219910 | None:intergenic | 40.0% | |
| CATAAAATATGCAAGGTCCG+GGG | - | chr2.3:45219086-45219105 | MS.gene062071:intron | 40.0% | |
| CGTTTGGGAAAACTTGAGTA+CGG | + | chr2.3:45219637-45219656 | None:intergenic | 40.0% | |
| GCATAAAATATGCAAGGTCC+GGG | - | chr2.3:45219085-45219104 | MS.gene062071:intron | 40.0% | |
| TGAAAACAAAGGGTTTGACC+TGG | + | chr2.3:45218933-45218952 | None:intergenic | 40.0% | |
| TGTGGGTATAAAAGAGTTGC+TGG | - | chr2.3:45219461-45219480 | MS.gene062071:CDS | 40.0% | |
| ! | AAGTGTTGCCAAAACCATTC+AGG | - | chr2.3:45219556-45219575 | MS.gene062071:CDS | 40.0% |
| ! | AGCATTCACCTGAATGGTTT+TGG | + | chr2.3:45219567-45219586 | None:intergenic | 40.0% |
| ! | CTTTTAGTGTGCTTCATGGA+GGG | - | chr2.3:45219387-45219406 | MS.gene062071:intron | 40.0% |
| ! | GCAGCTTCTTTTGCATAATC+TGG | + | chr2.3:45220191-45220210 | None:intergenic | 40.0% |
| ! | GTTTTGCCGATGATGATTGA+TGG | + | chr2.3:45218804-45218823 | None:intergenic | 40.0% |
| ! | TGAGCTTAGTTCAGTTGGTA+TGG | - | chr2.3:45219057-45219076 | MS.gene062071:intron | 40.0% |
| ! | TGTCTATGTCCGTGTTTTGT+TGG | - | chr2.3:45219242-45219261 | MS.gene062071:intron | 40.0% |
| ! | TTTTAGTGTGCTTCATGGAG+GGG | - | chr2.3:45219388-45219407 | MS.gene062071:intron | 40.0% |
| !! | ATCATGTCTCTTTTTGGTGG+TGG | + | chr2.3:45219123-45219142 | None:intergenic | 40.0% |
| !! | GGTTTTGGCAACACTTAAAG+GGG | + | chr2.3:45219552-45219571 | None:intergenic | 40.0% |
| AGGTGTGGGATGTGAAAATC+TGG | - | chr2.3:45220087-45220106 | MS.gene062071:intron | 45.0% | |
| CCTCCATGAAGCACACTAAA+AGG | + | chr2.3:45219389-45219408 | None:intergenic | 45.0% | |
| GCTGAAGCTCTTGCAAGTAT+TGG | - | chr2.3:45219425-45219444 | MS.gene062071:intron | 45.0% | |
| GGAGGACCATCAATCATCAT+CGG | - | chr2.3:45218795-45218814 | MS.gene062071:CDS | 45.0% | |
| TGGGGTTAGAATTGTTTGGG+CGG | - | chr2.3:45220030-45220049 | MS.gene062071:intron | 45.0% | |
| TTACACTTCGATCCTGTTGC+AGG | - | chr2.3:45220067-45220086 | MS.gene062071:intron | 45.0% | |
| ! | ATTGGAGCACATGTTGCTTG+TGG | - | chr2.3:45219443-45219462 | MS.gene062071:intron | 45.0% |
| ! | CAGCCTTTTAGTGTGCTTCA+TGG | - | chr2.3:45219383-45219402 | MS.gene062071:intron | 45.0% |
| ! | CCTTTTAGTGTGCTTCATGG+AGG | - | chr2.3:45219386-45219405 | MS.gene062071:intron | 45.0% |
| ! | GATATGTGTCGGTATCACGT+CGG | + | chr2.3:45219175-45219194 | None:intergenic | 45.0% |
| ! | TTGGAGCACATGTTGCTTGT+GGG | - | chr2.3:45219444-45219463 | MS.gene062071:intron | 45.0% |
| !! | AAGAGGAGCATTCACCTGAA+TGG | + | chr2.3:45219573-45219592 | None:intergenic | 45.0% |
| !! | AGTCACTGAAAAGTGTTGCC+AGG | - | chr2.3:45218912-45218931 | MS.gene062071:CDS | 45.0% |
| CCAACTGAACTAAGCTCACG+AGG | + | chr2.3:45219055-45219074 | None:intergenic | 50.0% | |
| CCTCGTGAGCTTAGTTCAGT+TGG | - | chr2.3:45219052-45219071 | MS.gene062071:intron | 50.0% | |
| TTCGATCCTGTTGCAGGTGT+GGG | - | chr2.3:45220073-45220092 | MS.gene062071:intron | 50.0% | |
| ! | TTGGTACTTGGCTCGATGTC+CGG | - | chr2.3:45219831-45219850 | MS.gene062071:intron | 50.0% |
| CTTCGATCCTGTTGCAGGTG+TGG | - | chr2.3:45220072-45220091 | MS.gene062071:intron | 55.0% | |
| TCACATCCCACACCTGCAAC+AGG | + | chr2.3:45220082-45220101 | None:intergenic | 55.0% | |
| !!! | GTCTCTTTTTGGTGGTGGCC+AGG | + | chr2.3:45219118-45219137 | None:intergenic | 55.0% |
| CAAGGTCCGGGGTTCGAACC+TGG | - | chr2.3:45219097-45219116 | MS.gene062071:intron | 65.0% | |
| TGGTGGCCAGGTTCGAACCC+CGG | + | chr2.3:45219106-45219125 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 45218793 | 45220241 | 45218793 | ID=MS.gene062071 |
| chr2.3 | mRNA | 45218793 | 45220241 | 45218793 | ID=MS.gene062071.t1;Parent=MS.gene062071 |
| chr2.3 | exon | 45220101 | 45220241 | 45220101 | ID=MS.gene062071.t1.exon1;Parent=MS.gene062071.t1 |
| chr2.3 | CDS | 45220101 | 45220241 | 45220101 | ID=cds.MS.gene062071.t1;Parent=MS.gene062071.t1 |
| chr2.3 | exon | 45219457 | 45219648 | 45219457 | ID=MS.gene062071.t1.exon2;Parent=MS.gene062071.t1 |
| chr2.3 | CDS | 45219457 | 45219648 | 45219457 | ID=cds.MS.gene062071.t1;Parent=MS.gene062071.t1 |
| chr2.3 | exon | 45218793 | 45218945 | 45218793 | ID=MS.gene062071.t1.exon3;Parent=MS.gene062071.t1 |
| chr2.3 | CDS | 45218793 | 45218945 | 45218793 | ID=cds.MS.gene062071.t1;Parent=MS.gene062071.t1 |
| Gene Sequence |
| Protein sequence |
