Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78593.t1 | P30075.2 | 100 | 389 | 0 | 0 | 1 | 389 | 1 | 389 | 3.00E-222 | 780.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78593.t1 | P30075 | 100.0 | 389 | 0 | 0 | 1 | 389 | 1 | 389 | 7.2e-225 | 780.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78593.t1 | G7K6H2 | 98.7 | 389 | 5 | 0 | 1 | 389 | 1 | 389 | 5.8e-220 | 772.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene78593 | -0.830259 | 3.25E-55 | -1.69E-46 |
| MS.gene049181 | MS.gene78593 | 0.820075 | 8.31E-53 | -1.69E-46 |
| MS.gene049222 | MS.gene78593 | -0.80988 | 1.52E-50 | -1.69E-46 |
| MS.gene049232 | MS.gene78593 | -0.827958 | 1.17E-54 | -1.69E-46 |
| MS.gene049259 | MS.gene78593 | 0.819495 | 1.13E-52 | -1.69E-46 |
| MS.gene049281 | MS.gene78593 | 0.838941 | 2.13E-57 | -1.69E-46 |
| MS.gene049285 | MS.gene78593 | -0.821623 | 3.66E-53 | -1.69E-46 |
| MS.gene049312 | MS.gene78593 | 0.812424 | 4.27E-51 | -1.69E-46 |
| MS.gene049320 | MS.gene78593 | -0.852006 | 6.13E-61 | -1.69E-46 |
| MS.gene049483 | MS.gene78593 | 0.826072 | 3.32E-54 | -1.69E-46 |
| MS.gene05010 | MS.gene78593 | -0.825922 | 3.60E-54 | -1.69E-46 |
| MS.gene050129 | MS.gene78593 | 0.817516 | 3.17E-52 | -1.69E-46 |
| MS.gene050163 | MS.gene78593 | -0.80437 | 2.23E-49 | -1.69E-46 |
| MS.gene050165 | MS.gene78593 | -0.802455 | 5.57E-49 | -1.69E-46 |
| MS.gene050170 | MS.gene78593 | -0.805406 | 1.36E-49 | -1.69E-46 |
| MS.gene050216 | MS.gene78593 | -0.81023 | 1.28E-50 | -1.69E-46 |
| MS.gene050323 | MS.gene78593 | -0.808968 | 2.39E-50 | -1.69E-46 |
| MS.gene050333 | MS.gene78593 | -0.804074 | 2.57E-49 | -1.69E-46 |
| MS.gene050363 | MS.gene78593 | 0.83774 | 4.35E-57 | -1.69E-46 |
| MS.gene050381 | MS.gene78593 | 0.884773 | 1.44E-71 | -1.69E-46 |
| MS.gene050496 | MS.gene78593 | -0.817899 | 2.60E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene78593 | -0.871008 | 9.47E-67 | -1.69E-46 |
| MS.gene050518 | MS.gene78593 | -0.814191 | 1.75E-51 | -1.69E-46 |
| MS.gene050577 | MS.gene78593 | -0.838746 | 2.39E-57 | -1.69E-46 |
| MS.gene050612 | MS.gene78593 | -0.852919 | 3.37E-61 | -1.69E-46 |
| MS.gene050675 | MS.gene78593 | -0.822825 | 1.93E-53 | -1.69E-46 |
| MS.gene050699 | MS.gene78593 | -0.83593 | 1.26E-56 | -1.69E-46 |
| MS.gene050832 | MS.gene78593 | 0.820966 | 5.19E-53 | -1.69E-46 |
| MS.gene050833 | MS.gene78593 | 0.813747 | 2.19E-51 | -1.69E-46 |
| MS.gene050868 | MS.gene78593 | -0.822481 | 2.31E-53 | -1.69E-46 |
| MS.gene050871 | MS.gene78593 | -0.823273 | 1.51E-53 | -1.69E-46 |
| MS.gene050883 | MS.gene78593 | 0.994116 | 1.07E-204 | -1.69E-46 |
| MS.gene050986 | MS.gene78593 | -0.845119 | 4.95E-59 | -1.69E-46 |
| MS.gene051044 | MS.gene78593 | 0.840379 | 9.01E-58 | -1.69E-46 |
| MS.gene051127 | MS.gene78593 | 0.885585 | 7.16E-72 | -1.69E-46 |
| MS.gene051138 | MS.gene78593 | 0.808429 | 3.11E-50 | -1.69E-46 |
| MS.gene051364 | MS.gene78593 | 0.840104 | 1.06E-57 | -1.69E-46 |
| MS.gene051366 | MS.gene78593 | 0.822717 | 2.04E-53 | -1.69E-46 |
| MS.gene051367 | MS.gene78593 | 0.811176 | 7.98E-51 | -1.69E-46 |
| MS.gene051410 | MS.gene78593 | 0.820156 | 7.96E-53 | -1.69E-46 |
| MS.gene05141 | MS.gene78593 | 0.83837 | 2.99E-57 | -1.69E-46 |
| MS.gene051551 | MS.gene78593 | -0.810324 | 1.22E-50 | -1.69E-46 |
| MS.gene051946 | MS.gene78593 | 0.867827 | 1.03E-65 | -1.69E-46 |
| MS.gene052053 | MS.gene78593 | 0.809597 | 1.75E-50 | -1.69E-46 |
| MS.gene052089 | MS.gene78593 | 0.802974 | 4.35E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene78593 | -0.821482 | 3.94E-53 | -1.69E-46 |
| MS.gene052329 | MS.gene78593 | 0.829309 | 5.53E-55 | -1.69E-46 |
| MS.gene052482 | MS.gene78593 | -0.8593 | 4.55E-63 | -1.69E-46 |
| MS.gene052486 | MS.gene78593 | -0.854973 | 8.61E-62 | -1.69E-46 |
| MS.gene052503 | MS.gene78593 | -0.802974 | 4.35E-49 | -1.69E-46 |
| MS.gene052823 | MS.gene78593 | -0.808888 | 2.48E-50 | -1.69E-46 |
| MS.gene053069 | MS.gene78593 | 0.820842 | 5.54E-53 | -1.69E-46 |
| MS.gene053203 | MS.gene78593 | -0.840903 | 6.57E-58 | -1.69E-46 |
| MS.gene053213 | MS.gene78593 | -0.814538 | 1.46E-51 | -1.69E-46 |
| MS.gene053286 | MS.gene78593 | -0.813531 | 2.44E-51 | -1.69E-46 |
| MS.gene053420 | MS.gene78593 | 0.857063 | 2.11E-62 | -1.69E-46 |
| MS.gene053436 | MS.gene78593 | -0.813618 | 2.34E-51 | -1.69E-46 |
| MS.gene053488 | MS.gene78593 | 0.807976 | 3.89E-50 | -1.69E-46 |
| MS.gene053549 | MS.gene78593 | 0.873452 | 1.45E-67 | -1.69E-46 |
| MS.gene053561 | MS.gene78593 | 0.840487 | 8.44E-58 | -1.69E-46 |
| MS.gene053574 | MS.gene78593 | -0.808798 | 2.59E-50 | -1.69E-46 |
| MS.gene053826 | MS.gene78593 | 0.87111 | 8.77E-67 | -1.69E-46 |
| MS.gene054056 | MS.gene78593 | 0.822931 | 1.82E-53 | -1.69E-46 |
| MS.gene054595 | MS.gene78593 | -0.829064 | 6.35E-55 | -1.69E-46 |
| MS.gene054616 | MS.gene78593 | 0.813338 | 2.69E-51 | -1.69E-46 |
| MS.gene054642 | MS.gene78593 | -0.805475 | 1.31E-49 | -1.69E-46 |
| MS.gene054707 | MS.gene78593 | 0.802694 | 4.97E-49 | -1.69E-46 |
| MS.gene054708 | MS.gene78593 | 0.84807 | 7.75E-60 | -1.69E-46 |
| MS.gene05470 | MS.gene78593 | -0.836806 | 7.54E-57 | -1.69E-46 |
| MS.gene054954 | MS.gene78593 | -0.842037 | 3.30E-58 | -1.69E-46 |
| MS.gene054959 | MS.gene78593 | 0.811804 | 5.83E-51 | -1.69E-46 |
| MS.gene055124 | MS.gene78593 | 0.85388 | 1.78E-61 | -1.69E-46 |
| MS.gene055139 | MS.gene78593 | 0.842859 | 2.00E-58 | -1.69E-46 |
| MS.gene055154 | MS.gene78593 | 0.885141 | 1.05E-71 | -1.69E-46 |
| MS.gene055202 | MS.gene78593 | 0.805162 | 1.52E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene78593 | -0.851526 | 8.38E-61 | -1.69E-46 |
| MS.gene055502 | MS.gene78593 | -0.862256 | 5.76E-64 | -1.69E-46 |
| MS.gene055549 | MS.gene78593 | 0.846315 | 2.35E-59 | -1.69E-46 |
| MS.gene055550 | MS.gene78593 | 0.841489 | 4.61E-58 | -1.69E-46 |
| MS.gene055551 | MS.gene78593 | 0.835744 | 1.40E-56 | -1.69E-46 |
| MS.gene055577 | MS.gene78593 | -0.810519 | 1.11E-50 | -1.69E-46 |
| MS.gene055750 | MS.gene78593 | -0.813436 | 2.56E-51 | -1.69E-46 |
| MS.gene055751 | MS.gene78593 | -0.800797 | 1.22E-48 | -1.69E-46 |
| MS.gene05589 | MS.gene78593 | -0.832549 | 8.87E-56 | -1.69E-46 |
| MS.gene055942 | MS.gene78593 | 0.802332 | 5.90E-49 | -1.69E-46 |
| MS.gene055961 | MS.gene78593 | 0.828912 | 6.90E-55 | -1.69E-46 |
| MS.gene056224 | MS.gene78593 | 0.81188 | 5.61E-51 | -1.69E-46 |
| MS.gene056310 | MS.gene78593 | 0.897049 | 2.05E-76 | -1.69E-46 |
| MS.gene056311 | MS.gene78593 | 0.937231 | 4.85E-98 | -1.69E-46 |
| MS.gene056313 | MS.gene78593 | 0.87054 | 1.35E-66 | -1.69E-46 |
| MS.gene056408 | MS.gene78593 | 0.827147 | 1.84E-54 | -1.69E-46 |
| MS.gene056504 | MS.gene78593 | -0.862167 | 6.14E-64 | -1.69E-46 |
| MS.gene056510 | MS.gene78593 | -0.817214 | 3.70E-52 | -1.69E-46 |
| MS.gene056530 | MS.gene78593 | 0.847132 | 1.40E-59 | -1.69E-46 |
| MS.gene056550 | MS.gene78593 | 0.82328 | 1.51E-53 | -1.69E-46 |
| MS.gene056657 | MS.gene78593 | -0.825057 | 5.77E-54 | -1.69E-46 |
| MS.gene056692 | MS.gene78593 | -0.815739 | 7.92E-52 | -1.69E-46 |
| MS.gene056761 | MS.gene78593 | 0.813701 | 2.24E-51 | -1.69E-46 |
| MS.gene057014 | MS.gene78593 | 0.874937 | 4.57E-68 | -1.69E-46 |
| MS.gene057499 | MS.gene78593 | 0.818869 | 1.56E-52 | -1.69E-46 |
| MS.gene058068 | MS.gene78593 | 0.819627 | 1.05E-52 | -1.69E-46 |
| MS.gene058099 | MS.gene78593 | 0.851105 | 1.10E-60 | -1.69E-46 |
| MS.gene058108 | MS.gene78593 | 0.831801 | 1.36E-55 | -1.69E-46 |
| MS.gene058109 | MS.gene78593 | 0.896163 | 4.80E-76 | -1.69E-46 |
| MS.gene058111 | MS.gene78593 | 0.931509 | 3.40E-94 | -1.69E-46 |
| MS.gene058117 | MS.gene78593 | 0.803431 | 3.50E-49 | -1.69E-46 |
| MS.gene058157 | MS.gene78593 | -0.80913 | 2.20E-50 | -1.69E-46 |
| MS.gene058171 | MS.gene78593 | 0.880079 | 7.37E-70 | -1.69E-46 |
| MS.gene058173 | MS.gene78593 | 0.874542 | 6.23E-68 | -1.69E-46 |
| MS.gene058175 | MS.gene78593 | 0.877366 | 6.66E-69 | -1.69E-46 |
| MS.gene058268 | MS.gene78593 | 0.813034 | 3.14E-51 | -1.69E-46 |
| MS.gene058269 | MS.gene78593 | 0.803462 | 3.45E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene78593 | -0.821052 | 4.96E-53 | -1.69E-46 |
| MS.gene058419 | MS.gene78593 | -0.832289 | 1.03E-55 | -1.69E-46 |
| MS.gene058493 | MS.gene78593 | 0.877238 | 7.38E-69 | -1.69E-46 |
| MS.gene058494 | MS.gene78593 | 0.872364 | 3.37E-67 | -1.69E-46 |
| MS.gene058496 | MS.gene78593 | 0.824273 | 8.83E-54 | -1.69E-46 |
| MS.gene058544 | MS.gene78593 | -0.82436 | 8.42E-54 | -1.69E-46 |
| MS.gene058628 | MS.gene78593 | 0.867103 | 1.75E-65 | -1.69E-46 |
| MS.gene058629 | MS.gene78593 | 0.858658 | 7.08E-63 | -1.69E-46 |
| MS.gene058630 | MS.gene78593 | 0.865905 | 4.21E-65 | -1.69E-46 |
| MS.gene05884 | MS.gene78593 | 0.80701 | 6.23E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene78593 | -0.863544 | 2.31E-64 | -1.69E-46 |
| MS.gene059023 | MS.gene78593 | -0.805499 | 1.30E-49 | -1.69E-46 |
| MS.gene059045 | MS.gene78593 | 0.827171 | 1.81E-54 | -1.69E-46 |
| MS.gene059052 | MS.gene78593 | 0.811529 | 6.69E-51 | -1.69E-46 |
| MS.gene059223 | MS.gene78593 | 0.843533 | 1.32E-58 | -1.69E-46 |
| MS.gene059236 | MS.gene78593 | 0.803453 | 3.46E-49 | -1.69E-46 |
| MS.gene059367 | MS.gene78593 | -0.804855 | 1.77E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene78593 | -0.825048 | 5.80E-54 | -1.69E-46 |
| MS.gene059690 | MS.gene78593 | 0.83051 | 2.82E-55 | -1.69E-46 |
| MS.gene059691 | MS.gene78593 | 0.803889 | 2.81E-49 | -1.69E-46 |
| MS.gene059694 | MS.gene78593 | 0.834147 | 3.55E-56 | -1.69E-46 |
| MS.gene059697 | MS.gene78593 | 0.841211 | 5.45E-58 | -1.69E-46 |
| MS.gene059718 | MS.gene78593 | -0.824276 | 8.81E-54 | -1.69E-46 |
| MS.gene059756 | MS.gene78593 | -0.801315 | 9.54E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene78593 | -0.851819 | 6.92E-61 | -1.69E-46 |
| MS.gene059916 | MS.gene78593 | 0.802408 | 5.69E-49 | -1.69E-46 |
| MS.gene060187 | MS.gene78593 | 0.808196 | 3.49E-50 | -1.69E-46 |
| MS.gene060482 | MS.gene78593 | -0.820153 | 7.97E-53 | -1.69E-46 |
| MS.gene060595 | MS.gene78593 | 0.838455 | 2.85E-57 | -1.69E-46 |
| MS.gene060703 | MS.gene78593 | -0.811091 | 8.33E-51 | -1.69E-46 |
| MS.gene060762 | MS.gene78593 | -0.819966 | 8.80E-53 | -1.69E-46 |
| MS.gene060778 | MS.gene78593 | -0.832394 | 9.69E-56 | -1.69E-46 |
| MS.gene06077 | MS.gene78593 | -0.885347 | 8.79E-72 | -1.69E-46 |
| MS.gene060982 | MS.gene78593 | -0.826125 | 3.22E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78593.t1 | MTR_5g007730 | 98.715 | 389 | 5 | 0 | 1 | 389 | 1 | 389 | 0.0 | 798 |
| MS.gene78593.t1 | MTR_1g098140 | 98.715 | 389 | 5 | 0 | 1 | 389 | 1 | 389 | 0.0 | 797 |
| MS.gene78593.t1 | MTR_7g016720 | 98.972 | 389 | 4 | 0 | 1 | 389 | 1 | 389 | 0.0 | 796 |
| MS.gene78593.t1 | MTR_7g016820 | 98.715 | 389 | 5 | 0 | 1 | 389 | 1 | 389 | 0.0 | 796 |
| MS.gene78593.t1 | MTR_7g016700 | 98.201 | 389 | 7 | 0 | 1 | 389 | 1 | 389 | 0.0 | 795 |
| MS.gene78593.t1 | MTR_1g097935 | 98.458 | 389 | 6 | 0 | 1 | 389 | 1 | 389 | 0.0 | 795 |
| MS.gene78593.t1 | MTR_7g016800 | 98.458 | 389 | 6 | 0 | 1 | 389 | 1 | 389 | 0.0 | 795 |
| MS.gene78593.t1 | MTR_1g097910 | 98.201 | 389 | 7 | 0 | 1 | 389 | 1 | 389 | 0.0 | 795 |
| MS.gene78593.t1 | MTR_7g016780 | 98.201 | 389 | 7 | 0 | 1 | 389 | 1 | 389 | 0.0 | 793 |
| MS.gene78593.t1 | MTR_5g007760 | 97.429 | 389 | 10 | 0 | 1 | 389 | 1 | 389 | 0.0 | 789 |
| MS.gene78593.t1 | MTR_5g007717 | 96.915 | 389 | 12 | 0 | 1 | 389 | 1 | 389 | 0.0 | 787 |
| MS.gene78593.t1 | MTR_5g007713 | 96.915 | 389 | 12 | 0 | 1 | 389 | 1 | 389 | 0.0 | 786 |
| MS.gene78593.t1 | MTR_3g083920 | 91.237 | 388 | 34 | 0 | 1 | 388 | 1 | 388 | 0.0 | 753 |
| MS.gene78593.t1 | MTR_3g083910 | 90.464 | 388 | 37 | 0 | 1 | 388 | 1 | 388 | 0.0 | 749 |
| MS.gene78593.t1 | MTR_2g058470 | 87.918 | 389 | 47 | 0 | 1 | 389 | 1 | 389 | 0.0 | 721 |
| MS.gene78593.t1 | MTR_3g086260 | 82.216 | 388 | 69 | 0 | 1 | 388 | 1 | 388 | 0.0 | 682 |
| MS.gene78593.t1 | MTR_7g084300 | 80.977 | 389 | 74 | 0 | 1 | 389 | 1 | 389 | 0.0 | 677 |
| MS.gene78593.t1 | MTR_7g113405 | 97.690 | 303 | 7 | 0 | 87 | 389 | 1 | 303 | 0.0 | 607 |
| MS.gene78593.t1 | MTR_3g088675 | 66.324 | 389 | 131 | 0 | 1 | 389 | 1 | 389 | 0.0 | 578 |
| MS.gene78593.t1 | MTR_5g007740 | 81.595 | 326 | 60 | 0 | 64 | 389 | 1 | 326 | 0.0 | 556 |
| MS.gene78593.t1 | MTR_5g007723 | 68.766 | 397 | 75 | 5 | 12 | 389 | 32 | 398 | 0.0 | 534 |
| MS.gene78593.t1 | MTR_5g007770 | 78.000 | 300 | 33 | 2 | 70 | 369 | 1 | 267 | 1.57e-167 | 469 |
| MS.gene78593.t1 | MTR_3g088670 | 48.974 | 390 | 185 | 6 | 10 | 388 | 2 | 388 | 5.51e-131 | 381 |
| MS.gene78593.t1 | MTR_4g075560 | 42.368 | 380 | 212 | 4 | 11 | 387 | 13 | 388 | 1.17e-102 | 309 |
| MS.gene78593.t1 | MTR_4g078730 | 37.802 | 373 | 225 | 2 | 15 | 387 | 24 | 389 | 5.15e-94 | 287 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78593.t1 | AT5G13930 | 82.732 | 388 | 66 | 1 | 3 | 389 | 8 | 395 | 0.0 | 675 |
| MS.gene78593.t1 | AT4G34850 | 40.849 | 377 | 219 | 3 | 15 | 389 | 18 | 392 | 8.09e-98 | 297 |
| MS.gene78593.t1 | AT4G00040 | 39.796 | 392 | 224 | 6 | 1 | 387 | 1 | 385 | 1.54e-96 | 293 |
| MS.gene78593.t1 | AT1G02050 | 39.332 | 389 | 225 | 6 | 2 | 387 | 12 | 392 | 2.26e-88 | 273 |
| MS.gene78593.t1 | AT4G34850 | 40.312 | 320 | 188 | 2 | 72 | 389 | 1 | 319 | 2.59e-82 | 254 |
Find 98 sgRNAs with CRISPR-Local
Find 123 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATATAGGTTTCTCAATTTC+TGG | 0.117134 | 7.4:-3412350 | None:intergenic |
| CTTGAATGGGGTGTGTTATT+TGG | 0.254367 | 7.4:+3412755 | MS.gene78593:CDS |
| AGAAGGTCCTGCAACCATTT+TGG | 0.255937 | 7.4:+3411450 | MS.gene78593:CDS |
| TACCAACAAGGTTGCTTTGC+AGG | 0.283953 | 7.4:+3412140 | MS.gene78593:CDS |
| AGAGAAGTGCTTAGTGAATA+TGG | 0.292804 | 7.4:+3412644 | MS.gene78593:CDS |
| CTGATTACAACTCAATCTTT+TGG | 0.293179 | 7.4:+3412540 | MS.gene78593:CDS |
| CTTTCAAAATCTCCTCTGTT+AGG | 0.305425 | 7.4:-3411875 | None:intergenic |
| AACCTATATTTGAGATGGTT+TGG | 0.308691 | 7.4:+3412363 | MS.gene78593:CDS |
| CTTGTTGGACAAGCACTATT+TGG | 0.314421 | 7.4:+3412287 | MS.gene78593:CDS |
| TCCTAGTGTTTGTGAATATA+TGG | 0.315099 | 7.4:+3411902 | MS.gene78593:CDS |
| CTTTGTTCAACACAATTTGC+TGG | 0.336534 | 7.4:-3411490 | None:intergenic |
| TGCAGTGCCAATGGCCAAAA+TGG | 0.341928 | 7.4:-3411464 | None:intergenic |
| TGAATATATGGCACCTTCAT+TGG | 0.342121 | 7.4:+3411914 | MS.gene78593:CDS |
| GCTTCGTTTGGCTAAAGATT+TGG | 0.342769 | 7.4:+3412172 | MS.gene78593:CDS |
| TCTACTTGATCTAAAATTGC+AGG | 0.345500 | 7.4:-3412581 | None:intergenic |
| TCAATGGCTCCTTCACTATC+TGG | 0.348362 | 7.4:-3412404 | None:intergenic |
| GGTTTCTCAATTTCTGGTAC+TGG | 0.354846 | 7.4:-3412344 | None:intergenic |
| GCGCAAAACAACAGTTTCTA+TGG | 0.360125 | 7.4:-3412795 | None:intergenic |
| TGGGGTGTGTTATTTGGCTT+TGG | 0.362099 | 7.4:+3412761 | MS.gene78593:CDS |
| AAGTGAGTAATCTTTGACTT+TGG | 0.369443 | 7.4:-3412020 | None:intergenic |
| AGGAGGCACGGTGCTTCGTT+TGG | 0.381968 | 7.4:+3412160 | MS.gene78593:CDS |
| CACCTTCTTAAAGATGTTCC+TGG | 0.385004 | 7.4:+3412458 | MS.gene78593:CDS |
| TCTAAAATTGCAGGGCCACC+AGG | 0.423583 | 7.4:-3412572 | None:intergenic |
| GTGTTATTTGGCTTTGGACC+AGG | 0.425222 | 7.4:+3412767 | MS.gene78593:CDS |
| ACTCACTTGGACAGCCTTGT+TGG | 0.426712 | 7.4:+3412272 | MS.gene78593:CDS |
| AGTTGAAGCTTTCCAACCAT+TGG | 0.427784 | 7.4:+3412511 | MS.gene78593:CDS |
| CCAATGGCCAAAATGGTTGC+AGG | 0.434445 | 7.4:-3411457 | None:intergenic |
| GTCCAAACCATCTCAAATAT+AGG | 0.437103 | 7.4:-3412365 | None:intergenic |
| GTTGAAGCTTTCCAACCATT+GGG | 0.438921 | 7.4:+3412512 | MS.gene78593:CDS |
| AACAGGAGAAGGACTTGAAT+GGG | 0.444037 | 7.4:+3412742 | MS.gene78593:CDS |
| TTACCAACTCACAAAACTCT+TGG | 0.448418 | 7.4:+3412085 | MS.gene78593:CDS |
| CAACAAAGGTGCCCGTGTAT+TGG | 0.459562 | 7.4:+3412202 | MS.gene78593:CDS |
| TACCACCACCATGTCTTGCC+TGG | 0.460934 | 7.4:-3411940 | None:intergenic |
| GGAGCTGCTGCACTAATTGT+TGG | 0.461083 | 7.4:+3412314 | MS.gene78593:CDS |
| AGTGAAGGCTATAAAAGAAT+GGG | 0.468743 | 7.4:+3411992 | MS.gene78593:CDS |
| GCAAGACATGGTGGTGGTAG+AGG | 0.469468 | 7.4:+3411944 | MS.gene78593:CDS |
| TTCACGAAGGTGACCATCAA+TGG | 0.471758 | 7.4:-3412420 | None:intergenic |
| CAAGATGGACTGAAGACAAC+AGG | 0.472027 | 7.4:+3412725 | MS.gene78593:CDS |
| CTCCTGCAAAGCAACCTTGT+TGG | 0.478750 | 7.4:-3412142 | None:intergenic |
| GTGAGTTGGTAATCAGCTCC+AGG | 0.479782 | 7.4:-3412074 | None:intergenic |
| GATAGTGAAGGAGCCATTGA+TGG | 0.482535 | 7.4:+3412407 | MS.gene78593:CDS |
| CTGTCCAAGTGAGTATCACT+AGG | 0.483602 | 7.4:-3412263 | None:intergenic |
| TACCAACTCACAAAACTCTT+GGG | 0.483926 | 7.4:+3412086 | MS.gene78593:CDS |
| ACCTTCTTAAAGATGTTCCT+GGG | 0.484500 | 7.4:+3412459 | MS.gene78593:CDS |
| TGGCACCTTCATTGGATGCC+AGG | 0.484824 | 7.4:+3411922 | MS.gene78593:CDS |
| GATGGTCACCTTCGTGAAGC+TGG | 0.486168 | 7.4:+3412425 | MS.gene78593:CDS |
| AATCAGAAATTCCCAATGGT+TGG | 0.496533 | 7.4:-3412523 | None:intergenic |
| CTGAAATTCGCAAGGCTCAG+AGG | 0.501086 | 7.4:+3411425 | MS.gene78593:CDS |
| CAGTGAAGGCTATAAAAGAA+TGG | 0.502364 | 7.4:+3411991 | MS.gene78593:CDS |
| CAACAGGAGAAGGACTTGAA+TGG | 0.502457 | 7.4:+3412741 | MS.gene78593:CDS |
| TGAGAAACCTATATTTGAGA+TGG | 0.507221 | 7.4:+3412358 | MS.gene78593:CDS |
| AGAAAGAAATCAACTCAAGA+TGG | 0.509999 | 7.4:+3412710 | MS.gene78593:CDS |
| TTAATTGTTTGCACTACAAG+TGG | 0.517381 | 7.4:+3412041 | MS.gene78593:CDS |
| CGGCCCTAGTGATACTCACT+TGG | 0.529910 | 7.4:+3412259 | MS.gene78593:CDS |
| GTCTTCGCCCATATGTGAAA+AGG | 0.532629 | 7.4:+3412108 | MS.gene78593:CDS |
| AGGGAAGGAGGCTGCAGTGA+AGG | 0.537534 | 7.4:+3411977 | MS.gene78593:CDS |
| TGAAATTCGCAAGGCTCAGA+GGG | 0.537672 | 7.4:+3411426 | MS.gene78593:CDS |
| CGCAAGGCTCAGAGGGCAGA+AGG | 0.541361 | 7.4:+3411433 | MS.gene78593:CDS |
| ATTTATACTTACACATGCGT+TGG | 0.542387 | 7.4:-3411579 | None:intergenic |
| ATGTTCTTTGAAACAATCCC+AGG | 0.542390 | 7.4:-3412476 | None:intergenic |
| CAGGAACATCTTTAAGAAGG+TGG | 0.551001 | 7.4:-3412457 | None:intergenic |
| TGCTGGATTTGCAGTGCCAA+TGG | 0.555118 | 7.4:-3411473 | None:intergenic |
| AGGTTGCTTTGCAGGAGGCA+CGG | 0.555669 | 7.4:+3412148 | MS.gene78593:CDS |
| GTGGTAGAGGTACCTAGACT+AGG | 0.557229 | 7.4:+3411957 | MS.gene78593:CDS |
| CTAAAATTGCAGGGCCACCA+GGG | 0.563478 | 7.4:-3412571 | None:intergenic |
| ACAGTTTCTATGGTAAGTCC+TGG | 0.566209 | 7.4:-3412785 | None:intergenic |
| TCCCAGGAACATCTTTAAGA+AGG | 0.567535 | 7.4:-3412460 | None:intergenic |
| ACAAGTGGTGTAGACATGCC+TGG | 0.569592 | 7.4:+3412056 | MS.gene78593:CDS |
| CAAATAGTGCTTGTCCAACA+AGG | 0.572762 | 7.4:-3412286 | None:intergenic |
| GCAGCCTCCTTCCCTAGTCT+AGG | 0.573798 | 7.4:-3411969 | None:intergenic |
| GGACTGAAGACAACAGGAGA+AGG | 0.577181 | 7.4:+3412731 | MS.gene78593:CDS |
| CAGAACAAACAACCAATACA+CGG | 0.584319 | 7.4:-3412214 | None:intergenic |
| GTGATAAATCTATGATCAAG+AGG | 0.584564 | 7.4:+3411841 | MS.gene78593:CDS |
| AGTGAGTATCACTAGGGCCG+CGG | 0.585653 | 7.4:-3412256 | None:intergenic |
| TCTTGCCTGGCATCCAATGA+AGG | 0.586158 | 7.4:-3411927 | None:intergenic |
| GTCACTGCAGTCACATTCCG+CGG | 0.589094 | 7.4:+3412239 | MS.gene78593:CDS |
| TTCACTAAGCACTTCTCTAG+TGG | 0.592176 | 7.4:-3412639 | None:intergenic |
| AGAGGTACCTAGACTAGGGA+AGG | 0.600145 | 7.4:+3411962 | MS.gene78593:CDS |
| CTACTTGATCTAAAATTGCA+GGG | 0.601634 | 7.4:-3412580 | None:intergenic |
| ATTGGATGCCAGGCAAGACA+TGG | 0.613066 | 7.4:+3411932 | MS.gene78593:CDS |
| TGGTAGAGGTACCTAGACTA+GGG | 0.618791 | 7.4:+3411958 | MS.gene78593:CDS |
| GGACAAGCACTATTTGGAGA+CGG | 0.624184 | 7.4:+3412293 | MS.gene78593:CDS |
| GGTACCTAGACTAGGGAAGG+AGG | 0.631813 | 7.4:+3411965 | MS.gene78593:CDS |
| CAACAAGGTTGCTTTGCAGG+AGG | 0.634702 | 7.4:+3412143 | MS.gene78593:CDS |
| GAGTGTATCTGAAATTCGCA+AGG | 0.641296 | 7.4:+3411417 | MS.gene78593:CDS |
| TTGTAATCAGAAATTCCCAA+TGG | 0.649608 | 7.4:-3412527 | None:intergenic |
| AGAACAAACAACCAATACAC+GGG | 0.659559 | 7.4:-3412213 | None:intergenic |
| ACAATTGCTCCAGATAGTGA+AGG | 0.659707 | 7.4:+3412395 | MS.gene78593:CDS |
| GAGATACATGTACCTAACAG+AGG | 0.667740 | 7.4:+3411863 | MS.gene78593:CDS |
| TGTCCAAGTGAGTATCACTA+GGG | 0.674277 | 7.4:-3412262 | None:intergenic |
| TGCCAGGCAAGACATGGTGG+TGG | 0.676603 | 7.4:+3411938 | MS.gene78593:CDS |
| GTGAAGGCTATAAAAGAATG+GGG | 0.681481 | 7.4:+3411993 | MS.gene78593:CDS |
| GCCATATATTCACAAACACT+AGG | 0.682483 | 7.4:-3411903 | None:intergenic |
| GATTTGGCTGAGAACAACAA+AGG | 0.683242 | 7.4:+3412188 | MS.gene78593:CDS |
| ATGTTAGTCCAGCTTCACGA+AGG | 0.698828 | 7.4:-3412433 | None:intergenic |
| AGGTATATGATGTACCAACA+AGG | 0.704257 | 7.4:+3412128 | MS.gene78593:CDS |
| ACAGGAGAAGGACTTGAATG+GGG | 0.714424 | 7.4:+3412743 | MS.gene78593:CDS |
| GGATGCCAGGCAAGACATGG+TGG | 0.736388 | 7.4:+3411935 | MS.gene78593:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCAGGAGAATTATATTAAA+TGG | - | chr7.4:3411629-3411648 | None:intergenic | 20.0% |
| !!! | GTGATTTTAAAGTAAAAATC+AGG | - | chr7.4:3411523-3411542 | None:intergenic | 20.0% |
| !!! | TAGTTCTATATTTATCCATT+TGG | - | chr7.4:3411743-3411762 | None:intergenic | 20.0% |
| ! | AATATAGGTTTCTCAATTTC+TGG | - | chr7.4:3412353-3412372 | None:intergenic | 25.0% |
| ! | ATGATATTAGTTCAGCAAAT+TGG | - | chr7.4:3411801-3411820 | None:intergenic | 25.0% |
| ! | GAAACCAATGACAAAATAAT+GGG | - | chr7.4:3411771-3411790 | None:intergenic | 25.0% |
| ! | TGAAACCAATGACAAAATAA+TGG | - | chr7.4:3411772-3411791 | None:intergenic | 25.0% |
| ! | TGATATTAGTTCAGCAAATT+GGG | - | chr7.4:3411800-3411819 | None:intergenic | 25.0% |
| !! | ATCATATACCTTTTCACATA+TGG | - | chr7.4:3412119-3412138 | None:intergenic | 25.0% |
| !! | TAATAAATTTGCTTGCCAAA+TGG | + | chr7.4:3411725-3411744 | MS.gene78593:intron | 25.0% |
| !! | TCATATACCTTTTCACATAT+GGG | - | chr7.4:3412118-3412137 | None:intergenic | 25.0% |
| !! | TCTTTATTTGTAAAAGACAC+TGG | + | chr7.4:3411692-3411711 | MS.gene78593:intron | 25.0% |
| AGAAAGAAATCAACTCAAGA+TGG | + | chr7.4:3412710-3412729 | MS.gene78593:CDS | 30.0% | |
| AGTGAAGGCTATAAAAGAAT+GGG | + | chr7.4:3411992-3412011 | MS.gene78593:CDS | 30.0% | |
| ATCATAGATTTATCACCTGA+AGG | - | chr7.4:3411837-3411856 | None:intergenic | 30.0% | |
| ATCCTATCATAATTACCTTC+AGG | + | chr7.4:3411819-3411838 | MS.gene78593:intron | 30.0% | |
| ATTTATACTTACACATGCGT+TGG | - | chr7.4:3411582-3411601 | None:intergenic | 30.0% | |
| GTGATAAATCTATGATCAAG+AGG | + | chr7.4:3411841-3411860 | MS.gene78593:CDS | 30.0% | |
| TCCTAGTGTTTGTGAATATA+TGG | + | chr7.4:3411902-3411921 | MS.gene78593:CDS | 30.0% | |
| TGAGAAACCTATATTTGAGA+TGG | + | chr7.4:3412358-3412377 | MS.gene78593:CDS | 30.0% | |
| TGGATAAATATAGAACTACC+AGG | + | chr7.4:3411745-3411764 | MS.gene78593:intron | 30.0% | |
| TTAATTGTTTGCACTACAAG+TGG | + | chr7.4:3412041-3412060 | MS.gene78593:CDS | 30.0% | |
| TTGTAATCAGAAATTCCCAA+TGG | - | chr7.4:3412530-3412549 | None:intergenic | 30.0% | |
| ! | AACCTATATTTGAGATGGTT+TGG | + | chr7.4:3412363-3412382 | MS.gene78593:CDS | 30.0% |
| ! | AAGTGAGTAATCTTTGACTT+TGG | - | chr7.4:3412023-3412042 | None:intergenic | 30.0% |
| ! | CTACTTGATCTAAAATTGCA+GGG | - | chr7.4:3412583-3412602 | None:intergenic | 30.0% |
| ! | CTGATTACAACTCAATCTTT+TGG | + | chr7.4:3412540-3412559 | MS.gene78593:CDS | 30.0% |
| ! | TCTACTTGATCTAAAATTGC+AGG | - | chr7.4:3412584-3412603 | None:intergenic | 30.0% |
| AATCAGAAATTCCCAATGGT+TGG | - | chr7.4:3412526-3412545 | None:intergenic | 35.0% | |
| ACCTTCTTAAAGATGTTCCT+GGG | + | chr7.4:3412459-3412478 | MS.gene78593:CDS | 35.0% | |
| AGAACAAACAACCAATACAC+GGG | - | chr7.4:3412216-3412235 | None:intergenic | 35.0% | |
| AGGTATATGATGTACCAACA+AGG | + | chr7.4:3412128-3412147 | MS.gene78593:CDS | 35.0% | |
| CACCTGAAGGTAATTATGAT+AGG | - | chr7.4:3411824-3411843 | None:intergenic | 35.0% | |
| CAGAACAAACAACCAATACA+CGG | - | chr7.4:3412217-3412236 | None:intergenic | 35.0% | |
| CAGTGAAGGCTATAAAAGAA+TGG | + | chr7.4:3411991-3412010 | MS.gene78593:CDS | 35.0% | |
| CTTTCAAAATCTCCTCTGTT+AGG | - | chr7.4:3411878-3411897 | None:intergenic | 35.0% | |
| CTTTGTTCAACACAATTTGC+TGG | - | chr7.4:3411493-3411512 | None:intergenic | 35.0% | |
| GCCATATATTCACAAACACT+AGG | - | chr7.4:3411906-3411925 | None:intergenic | 35.0% | |
| GTCCAAACCATCTCAAATAT+AGG | - | chr7.4:3412368-3412387 | None:intergenic | 35.0% | |
| GTGAAGGCTATAAAAGAATG+GGG | + | chr7.4:3411993-3412012 | MS.gene78593:CDS | 35.0% | |
| TACCAACTCACAAAACTCTT+GGG | + | chr7.4:3412086-3412105 | MS.gene78593:CDS | 35.0% | |
| TGAATATATGGCACCTTCAT+TGG | + | chr7.4:3411914-3411933 | MS.gene78593:CDS | 35.0% | |
| TTACCAACTCACAAAACTCT+TGG | + | chr7.4:3412085-3412104 | MS.gene78593:CDS | 35.0% | |
| TTGTAAAAGACACTGGTGAA+TGG | + | chr7.4:3411699-3411718 | MS.gene78593:intron | 35.0% | |
| !! | AGAGAAGTGCTTAGTGAATA+TGG | + | chr7.4:3412644-3412663 | MS.gene78593:CDS | 35.0% |
| !! | ATGTTCTTTGAAACAATCCC+AGG | - | chr7.4:3412479-3412498 | None:intergenic | 35.0% |
| AACAGGAGAAGGACTTGAAT+GGG | + | chr7.4:3412742-3412761 | MS.gene78593:CDS | 40.0% | |
| ACAATTGCTCCAGATAGTGA+AGG | + | chr7.4:3412395-3412414 | MS.gene78593:CDS | 40.0% | |
| ACAGTTTCTATGGTAAGTCC+TGG | - | chr7.4:3412788-3412807 | None:intergenic | 40.0% | |
| AGTTGAAGCTTTCCAACCAT+TGG | + | chr7.4:3412511-3412530 | MS.gene78593:CDS | 40.0% | |
| CAAATAGTGCTTGTCCAACA+AGG | - | chr7.4:3412289-3412308 | None:intergenic | 40.0% | |
| CACCTTCTTAAAGATGTTCC+TGG | + | chr7.4:3412458-3412477 | MS.gene78593:CDS | 40.0% | |
| CTTGTTGGACAAGCACTATT+TGG | + | chr7.4:3412287-3412306 | MS.gene78593:CDS | 40.0% | |
| GAGATACATGTACCTAACAG+AGG | + | chr7.4:3411863-3411882 | MS.gene78593:CDS | 40.0% | |
| GATTTGGCTGAGAACAACAA+AGG | + | chr7.4:3412188-3412207 | MS.gene78593:CDS | 40.0% | |
| GCGCAAAACAACAGTTTCTA+TGG | - | chr7.4:3412798-3412817 | None:intergenic | 40.0% | |
| GCTTCGTTTGGCTAAAGATT+TGG | + | chr7.4:3412172-3412191 | MS.gene78593:CDS | 40.0% | |
| GTTGAAGCTTTCCAACCATT+GGG | + | chr7.4:3412512-3412531 | MS.gene78593:CDS | 40.0% | |
| TGTCCAAGTGAGTATCACTA+GGG | - | chr7.4:3412265-3412284 | None:intergenic | 40.0% | |
| TTCACTAAGCACTTCTCTAG+TGG | - | chr7.4:3412642-3412661 | None:intergenic | 40.0% | |
| ! | AACAGCTTGCAAGTGTTTTC+AGG | - | chr7.4:3411646-3411665 | None:intergenic | 40.0% |
| ! | CAGGAACATCTTTAAGAAGG+TGG | - | chr7.4:3412460-3412479 | None:intergenic | 40.0% |
| ! | CTTGAATGGGGTGTGTTATT+TGG | + | chr7.4:3412755-3412774 | MS.gene78593:CDS | 40.0% |
| ! | GAGTGTATCTGAAATTCGCA+AGG | + | chr7.4:3411417-3411436 | MS.gene78593:CDS | 40.0% |
| ! | TCCCAGGAACATCTTTAAGA+AGG | - | chr7.4:3412463-3412482 | None:intergenic | 40.0% |
| !! | CAATGACAAAATAATGGGCC+TGG | - | chr7.4:3411766-3411785 | None:intergenic | 40.0% |
| !! | CAGGCCCATTATTTTGTCAT+TGG | + | chr7.4:3411764-3411783 | MS.gene78593:intron | 40.0% |
| !! | GGTTTCTCAATTTCTGGTAC+TGG | - | chr7.4:3412347-3412366 | None:intergenic | 40.0% |
| !! | TCTCATCTTTTCAGGCTTCA+AGG | - | chr7.4:3412618-3412637 | None:intergenic | 40.0% |
| ACAGGAGAAGGACTTGAATG+GGG | + | chr7.4:3412743-3412762 | MS.gene78593:CDS | 45.0% | |
| ATGTTAGTCCAGCTTCACGA+AGG | - | chr7.4:3412436-3412455 | None:intergenic | 45.0% | |
| CAACAGGAGAAGGACTTGAA+TGG | + | chr7.4:3412741-3412760 | MS.gene78593:CDS | 45.0% | |
| CTGTCCAAGTGAGTATCACT+AGG | - | chr7.4:3412266-3412285 | None:intergenic | 45.0% | |
| GATAGTGAAGGAGCCATTGA+TGG | + | chr7.4:3412407-3412426 | MS.gene78593:CDS | 45.0% | |
| GGACAAGCACTATTTGGAGA+CGG | + | chr7.4:3412293-3412312 | MS.gene78593:CDS | 45.0% | |
| GTCTTCGCCCATATGTGAAA+AGG | + | chr7.4:3412108-3412127 | MS.gene78593:CDS | 45.0% | |
| TCAATGGCTCCTTCACTATC+TGG | - | chr7.4:3412407-3412426 | None:intergenic | 45.0% | |
| TGAAATTCGCAAGGCTCAGA+GGG | + | chr7.4:3411426-3411445 | MS.gene78593:CDS | 45.0% | |
| TTCACGAAGGTGACCATCAA+TGG | - | chr7.4:3412423-3412442 | None:intergenic | 45.0% | |
| ! | AGAAGGTCCTGCAACCATTT+TGG | + | chr7.4:3411450-3411469 | MS.gene78593:CDS | 45.0% |
| ! | ATCTTTTGGATTGCACACCC+TGG | + | chr7.4:3412554-3412573 | MS.gene78593:CDS | 45.0% |
| ! | CTAGTGGCTCTCATCTTTTC+AGG | - | chr7.4:3412626-3412645 | None:intergenic | 45.0% |
| ! | TACCAACAAGGTTGCTTTGC+AGG | + | chr7.4:3412140-3412159 | MS.gene78593:CDS | 45.0% |
| !! | CAAGATGGACTGAAGACAAC+AGG | + | chr7.4:3412725-3412744 | MS.gene78593:CDS | 45.0% |
| !! | GACCCAAGAGTTTTGTGAGT+TGG | - | chr7.4:3412091-3412110 | None:intergenic | 45.0% |
| !! | GTGTTATTTGGCTTTGGACC+AGG | + | chr7.4:3412767-3412786 | MS.gene78593:CDS | 45.0% |
| !! | TGGGGTGTGTTATTTGGCTT+TGG | + | chr7.4:3412761-3412780 | MS.gene78593:CDS | 45.0% |
| !! | TGGTAGAGGTACCTAGACTA+GGG | + | chr7.4:3411958-3411977 | MS.gene78593:CDS | 45.0% |
| ACAAGTGGTGTAGACATGCC+TGG | + | chr7.4:3412056-3412075 | MS.gene78593:CDS | 50.0% | |
| ATTGGATGCCAGGCAAGACA+TGG | + | chr7.4:3411932-3411951 | MS.gene78593:CDS | 50.0% | |
| CCAATGGCCAAAATGGTTGC+AGG | - | chr7.4:3411460-3411479 | None:intergenic | 50.0% | |
| CTAAAATTGCAGGGCCACCA+GGG | - | chr7.4:3412574-3412593 | None:intergenic | 50.0% | |
| CTCCTGCAAAGCAACCTTGT+TGG | - | chr7.4:3412145-3412164 | None:intergenic | 50.0% | |
| CTGAAATTCGCAAGGCTCAG+AGG | + | chr7.4:3411425-3411444 | MS.gene78593:CDS | 50.0% | |
| GGACTGAAGACAACAGGAGA+AGG | + | chr7.4:3412731-3412750 | MS.gene78593:CDS | 50.0% | |
| GGAGCTGCTGCACTAATTGT+TGG | + | chr7.4:3412314-3412333 | MS.gene78593:CDS | 50.0% | |
| TCTTGCCTGGCATCCAATGA+AGG | - | chr7.4:3411930-3411949 | None:intergenic | 50.0% | |
| TGCAGTGCCAATGGCCAAAA+TGG | - | chr7.4:3411467-3411486 | None:intergenic | 50.0% | |
| TGCTGGATTTGCAGTGCCAA+TGG | - | chr7.4:3411476-3411495 | None:intergenic | 50.0% | |
| ! | ACTCACTTGGACAGCCTTGT+TGG | + | chr7.4:3412272-3412291 | MS.gene78593:CDS | 50.0% |
| ! | CAACAAGGTTGCTTTGCAGG+AGG | + | chr7.4:3412143-3412162 | MS.gene78593:CDS | 50.0% |
| ! | TCTAAAATTGCAGGGCCACC+AGG | - | chr7.4:3412575-3412594 | None:intergenic | 50.0% |
| ! | TTTTGGATTGCACACCCTGG+TGG | + | chr7.4:3412557-3412576 | MS.gene78593:CDS | 50.0% |
| !! | AGAGGTACCTAGACTAGGGA+AGG | + | chr7.4:3411962-3411981 | MS.gene78593:CDS | 50.0% |
| !! | CAACAAAGGTGCCCGTGTAT+TGG | + | chr7.4:3412202-3412221 | MS.gene78593:CDS | 50.0% |
| !! | CCTGCAACCATTTTGGCCAT+TGG | + | chr7.4:3411457-3411476 | MS.gene78593:CDS | 50.0% |
| !! | GTGAGTTGGTAATCAGCTCC+AGG | - | chr7.4:3412077-3412096 | None:intergenic | 50.0% |
| !! | GTGGTAGAGGTACCTAGACT+AGG | + | chr7.4:3411957-3411976 | MS.gene78593:CDS | 50.0% |
| AGTGAGTATCACTAGGGCCG+CGG | - | chr7.4:3412259-3412278 | None:intergenic | 55.0% | |
| CGGCCCTAGTGATACTCACT+TGG | + | chr7.4:3412259-3412278 | MS.gene78593:CDS | 55.0% | |
| GATGGTCACCTTCGTGAAGC+TGG | + | chr7.4:3412425-3412444 | MS.gene78593:CDS | 55.0% | |
| GGTACCTAGACTAGGGAAGG+AGG | + | chr7.4:3411965-3411984 | MS.gene78593:CDS | 55.0% | |
| GTCACTGCAGTCACATTCCG+CGG | + | chr7.4:3412239-3412258 | MS.gene78593:CDS | 55.0% | |
| TACCACCACCATGTCTTGCC+TGG | - | chr7.4:3411943-3411962 | None:intergenic | 55.0% | |
| TGGCACCTTCATTGGATGCC+AGG | + | chr7.4:3411922-3411941 | MS.gene78593:CDS | 55.0% | |
| ! | AGGTTGCTTTGCAGGAGGCA+CGG | + | chr7.4:3412148-3412167 | MS.gene78593:CDS | 55.0% |
| !! | GCAAGACATGGTGGTGGTAG+AGG | + | chr7.4:3411944-3411963 | MS.gene78593:CDS | 55.0% |
| AGGGAAGGAGGCTGCAGTGA+AGG | + | chr7.4:3411977-3411996 | MS.gene78593:CDS | 60.0% | |
| GCAGCCTCCTTCCCTAGTCT+AGG | - | chr7.4:3411972-3411991 | None:intergenic | 60.0% | |
| GGATGCCAGGCAAGACATGG+TGG | + | chr7.4:3411935-3411954 | MS.gene78593:CDS | 60.0% | |
| TGCCAGGCAAGACATGGTGG+TGG | + | chr7.4:3411938-3411957 | MS.gene78593:CDS | 60.0% | |
| ! | AGGAGGCACGGTGCTTCGTT+TGG | + | chr7.4:3412160-3412179 | MS.gene78593:CDS | 60.0% |
| CGCAAGGCTCAGAGGGCAGA+AGG | + | chr7.4:3411433-3411452 | MS.gene78593:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 3411412 | 3412832 | 3411412 | ID=MS.gene78593 |
| chr7.4 | mRNA | 3411412 | 3412832 | 3411412 | ID=MS.gene78593.t1;Parent=MS.gene78593 |
| chr7.4 | exon | 3411412 | 3411589 | 3411412 | ID=MS.gene78593.t1.exon1;Parent=MS.gene78593.t1 |
| chr7.4 | CDS | 3411412 | 3411589 | 3411412 | ID=cds.MS.gene78593.t1;Parent=MS.gene78593.t1 |
| chr7.4 | exon | 3411841 | 3412832 | 3411841 | ID=MS.gene78593.t1.exon2;Parent=MS.gene78593.t1 |
| chr7.4 | CDS | 3411841 | 3412832 | 3411841 | ID=cds.MS.gene78593.t1;Parent=MS.gene78593.t1 |
| Gene Sequence |
| Protein sequence |
