AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene67682


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene67682.t1 MTR_4g107970 97.054 577 11 3 1 576 42 613 0.0 1138
MS.gene67682.t1 MTR_4g107970 97.227 541 9 3 37 576 1 536 0.0 1067
MS.gene67682.t1 MTR_7g009730 39.547 574 253 20 27 559 38 558 1.56e-95 303
MS.gene67682.t1 MTR_2g088000 33.817 482 225 17 18 487 157 556 4.67e-55 196
MS.gene67682.t1 MTR_3g053330 36.158 354 152 9 23 361 87 381 1.53e-52 186
MS.gene67682.t1 MTR_4g094412 47.015 268 110 8 44 303 76 319 1.54e-50 181
MS.gene67682.t1 MTR_4g094412 47.015 268 110 8 44 303 85 328 2.12e-50 181
MS.gene67682.t1 MTR_2g023930 35.343 481 196 16 29 487 143 530 2.60e-49 179
MS.gene67682.t1 MTR_4g132430 37.798 336 154 8 29 364 114 394 3.91e-49 177
MS.gene67682.t1 MTR_4g132430 51.208 207 79 5 158 364 76 260 3.77e-48 172
MS.gene67682.t1 MTR_7g110720 71.845 103 29 0 192 294 163 265 2.04e-47 171
MS.gene67682.t1 MTR_7g110720 71.845 103 29 0 192 294 190 292 2.17e-47 171
MS.gene67682.t1 MTR_2g045360 49.143 175 77 3 184 358 181 343 2.72e-43 160
MS.gene67682.t1 MTR_4g049790 51.948 154 61 3 203 356 297 437 3.40e-42 160
MS.gene67682.t1 MTR_4g049760 63.810 105 38 0 203 307 275 379 5.68e-41 156
MS.gene67682.t1 MTR_4g047580 29.106 481 247 16 22 487 91 492 1.49e-38 149
MS.gene67682.t1 MTR_4g007060 48.214 112 53 3 201 310 109 217 2.51e-25 106
MS.gene67682.t1 MTR_4g007060 48.214 112 53 3 201 310 143 251 3.43e-25 106
MS.gene67682.t1 MTR_1g013760 50.000 94 47 0 201 294 123 216 8.42e-25 104
MS.gene67682.t1 MTR_1g013790 50.633 79 39 0 216 294 99 177 1.11e-24 103
MS.gene67682.t1 MTR_5g074400 45.946 111 52 3 172 278 373 479 1.85e-24 108
MS.gene67682.t1 MTR_5g074400 52.459 61 27 2 218 278 243 301 1.58e-13 73.9
MS.gene67682.t1 MTR_3g106060 63.333 60 22 0 217 276 137 196 2.19e-24 103
MS.gene67682.t1 MTR_5g094430 34.637 179 99 4 116 294 145 305 1.08e-23 103
MS.gene67682.t1 MTR_5g094430 39.252 107 53 4 218 314 66 170 4.74e-12 68.6
MS.gene67682.t1 MTR_5g094430 34.637 179 99 4 116 294 167 327 1.11e-23 104
MS.gene67682.t1 MTR_5g094430 39.252 107 53 4 218 314 88 192 3.69e-12 68.9
MS.gene67682.t1 MTR_3g031220 52.564 78 36 1 201 278 348 424 1.11e-23 105
MS.gene67682.t1 MTR_3g031220 49.206 63 30 2 218 280 198 258 2.78e-13 72.8
MS.gene67682.t1 MTR_5g094430 34.637 179 99 4 116 294 279 439 5.03e-23 103
MS.gene67682.t1 MTR_5g094430 50.820 61 28 2 218 278 200 258 9.47e-12 68.2
MS.gene67682.t1 MTR_4g013260 50.633 79 38 1 201 279 319 396 7.62e-23 102
MS.gene67682.t1 MTR_4g013260 48.333 60 30 1 219 278 185 243 6.12e-13 71.6
MS.gene67682.t1 MTR_7g071120 36.702 188 93 6 201 382 307 474 9.60e-23 102
MS.gene67682.t1 MTR_7g071120 51.613 62 28 2 219 280 167 226 2.96e-12 69.7
MS.gene67682.t1 MTR_5g042920 36.842 171 101 3 141 309 245 410 1.92e-22 100
MS.gene67682.t1 MTR_5g042920 50.746 67 30 3 212 278 146 209 1.05e-13 73.9
MS.gene67682.t1 MTR_2g105060 59.677 62 25 0 217 278 93 154 2.34e-22 96.7
MS.gene67682.t1 MTR_3g056100 45.833 96 48 2 200 292 253 347 2.41e-22 100
MS.gene67682.t1 MTR_3g056100 49.180 61 29 2 218 278 99 157 1.84e-11 67.0
MS.gene67682.t1 MTR_3g056100 45.833 96 48 2 200 292 240 334 2.52e-22 100
MS.gene67682.t1 MTR_3g056100 49.180 61 29 2 218 278 99 157 1.93e-11 66.6
MS.gene67682.t1 MTR_3g056100 51.899 79 37 1 200 278 397 474 2.70e-22 101
MS.gene67682.t1 MTR_3g056100 49.180 61 29 2 218 278 243 301 1.68e-11 67.4
MS.gene67682.t1 MTR_3g056100 51.899 79 37 1 200 278 384 461 2.98e-22 101
MS.gene67682.t1 MTR_3g056100 49.180 61 29 2 218 278 243 301 1.77e-11 67.4
MS.gene67682.t1 MTR_2g105060 43.478 92 41 1 198 278 138 229 3.03e-22 98.2
MS.gene67682.t1 MTR_7g011820 42.478 113 60 2 185 293 373 484 4.24e-22 100
MS.gene67682.t1 MTR_7g011820 42.222 90 49 3 189 278 200 286 2.31e-12 70.1
MS.gene67682.t1 MTR_3g009470 46.392 97 47 2 186 278 459 554 5.95e-22 100
MS.gene67682.t1 MTR_3g009470 39.000 100 56 4 179 278 244 338 1.88e-12 70.5
MS.gene67682.t1 MTR_4g082580 50.000 80 39 1 203 282 263 341 1.92e-21 97.1
MS.gene67682.t1 MTR_4g082580 34.286 140 79 5 218 355 145 273 4.82e-12 68.6
MS.gene67682.t1 MTR_7g100510 46.667 90 46 2 206 294 349 437 2.20e-21 97.4
MS.gene67682.t1 MTR_7g100510 45.679 81 41 3 213 293 185 262 1.09e-13 73.9
MS.gene67682.t1 MTR_7g080000 50.000 78 38 1 201 278 415 491 3.16e-21 98.6
MS.gene67682.t1 MTR_7g080000 49.206 63 30 2 216 278 232 292 1.95e-11 67.4
MS.gene67682.t1 MTR_7g080020 50.000 78 38 1 201 278 476 552 3.27e-21 98.6
MS.gene67682.t1 MTR_7g080020 48.485 66 32 2 216 281 278 341 2.36e-11 67.0
MS.gene67682.t1 MTR_1g086790 40.000 125 69 4 185 307 128 248 1.13e-20 93.6
MS.gene67682.t1 MTR_7g109800 39.167 120 60 3 185 296 104 218 1.73e-20 92.4
MS.gene67682.t1 MTR_4g130900 51.250 80 38 1 200 279 341 419 2.44e-20 94.7
MS.gene67682.t1 MTR_5g044695 77.778 45 10 0 202 246 61 105 5.65e-20 85.9
MS.gene67682.t1 MTR_8g007270 46.988 83 43 1 194 276 130 211 5.86e-20 89.4
MS.gene67682.t1 MTR_4g094588 42.857 91 51 1 205 295 165 254 9.18e-20 91.3
MS.gene67682.t1 MTR_5g097490 45.882 85 45 1 203 287 237 320 1.39e-19 91.7
MS.gene67682.t1 MTR_3g104750 43.750 80 44 1 196 275 82 160 1.84e-19 86.3
MS.gene67682.t1 MTR_6g038890 77.778 45 10 0 202 246 172 216 2.33e-19 87.4
MS.gene67682.t1 MTR_2g033820 48.052 77 39 1 202 278 187 262 2.95e-19 90.5
MS.gene67682.t1 MTR_3g095080 47.368 76 39 1 201 276 151 225 3.05e-19 87.8
MS.gene67682.t1 MTR_3g095080 47.368 76 39 1 201 276 127 201 3.36e-19 87.0
MS.gene67682.t1 MTR_4g122530 47.436 78 40 1 202 279 192 268 5.57e-19 90.1
MS.gene67682.t1 MTR_1g015140 49.315 73 36 1 203 275 87 158 8.39e-19 84.3
MS.gene67682.t1 MTR_7g079010 51.351 74 35 1 202 275 125 197 1.20e-18 85.5
MS.gene67682.t1 MTR_5g016610 55.224 67 28 1 213 279 196 260 1.34e-18 86.7
MS.gene67682.t1 MTR_4g094908 57.627 59 25 0 219 277 267 325 1.76e-18 87.4
MS.gene67682.t1 MTR_5g043880 38.462 117 64 3 180 295 92 201 2.30e-18 85.9
MS.gene67682.t1 MTR_5g091390 48.649 74 37 1 205 278 144 216 2.38e-18 86.7
MS.gene67682.t1 MTR_8g087000 55.385 65 29 0 218 282 76 140 3.34e-18 84.7
MS.gene67682.t1 MTR_8g087000 55.385 65 29 0 218 282 77 141 3.50e-18 84.7
MS.gene67682.t1 MTR_7g109600 53.425 73 31 1 219 291 54 123 4.76e-18 84.7
MS.gene67682.t1 MTR_7g028415 49.275 69 34 1 209 277 84 151 5.19e-18 82.4
MS.gene67682.t1 MTR_7g028710 49.275 69 34 1 209 277 84 151 5.19e-18 82.4
MS.gene67682.t1 MTR_8g092140 46.753 77 39 2 201 276 142 217 9.05e-18 83.2
MS.gene67682.t1 MTR_8g092010 42.857 77 43 1 205 281 95 170 1.15e-17 81.6
MS.gene67682.t1 MTR_2g083870 49.367 79 40 0 209 287 71 149 1.18e-17 83.6
MS.gene67682.t1 MTR_2g024350 44.330 97 45 2 219 306 9 105 2.78e-17 81.6
MS.gene67682.t1 MTR_3g095040 46.753 77 40 1 205 281 105 180 3.37e-17 80.9
MS.gene67682.t1 MTR_1g070455 53.448 58 27 0 219 276 294 351 7.44e-17 82.8
MS.gene67682.t1 MTR_1g009613 52.542 59 28 0 219 277 263 321 8.51e-17 82.4
MS.gene67682.t1 MTR_2g016770 53.333 60 28 0 219 278 36 95 1.36e-16 79.3
MS.gene67682.t1 MTR_2g016770 53.333 60 28 0 219 278 28 87 1.87e-16 79.0
MS.gene67682.t1 MTR_3g108960 40.870 115 48 4 179 275 259 371 2.66e-16 81.6
MS.gene67682.t1 MTR_2g032030 46.667 75 40 0 219 293 268 342 5.89e-16 81.3
MS.gene67682.t1 MTR_2g024380 46.667 75 38 1 204 278 239 311 6.61e-16 80.9
MS.gene67682.t1 MTR_2g032030 46.667 75 40 0 219 293 268 342 1.40e-15 79.7
MS.gene67682.t1 MTR_6g086555 47.368 76 38 2 205 279 193 267 2.00e-15 79.0
MS.gene67682.t1 MTR_7g062220 58.621 58 23 1 218 275 124 180 3.56e-15 77.0
MS.gene67682.t1 MTR_1g077780 44.304 79 43 1 202 280 46 123 5.68e-15 72.8
MS.gene67682.t1 MTR_0117s0040 40.404 99 48 4 180 275 41 131 5.78e-15 75.5
MS.gene67682.t1 MTR_4g127040 50.000 64 30 1 213 276 242 303 6.43e-15 76.3
MS.gene67682.t1 MTR_1g099600 35.455 110 66 2 184 288 146 255 6.92e-15 76.3
MS.gene67682.t1 MTR_8g028565 47.887 71 37 0 218 288 155 225 7.08e-15 76.6
MS.gene67682.t1 MTR_4g007060 52.459 61 27 2 197 255 139 199 1.16e-14 74.3
MS.gene67682.t1 MTR_7g079040 39.560 91 52 1 201 288 134 224 1.62e-14 75.5
MS.gene67682.t1 MTR_8g098945 42.466 73 42 0 216 288 127 199 5.89e-14 72.8
MS.gene67682.t1 MTR_8g096730 36.364 99 59 2 188 283 37 134 7.07e-14 69.7
MS.gene67682.t1 MTR_3g031220 49.206 63 30 2 218 280 198 258 1.16e-13 73.2
MS.gene67682.t1 MTR_5g074200 42.308 78 43 2 218 295 220 295 4.35e-13 70.9
MS.gene67682.t1 MTR_8g099350 35.172 145 73 5 138 273 57 189 9.60e-13 70.5
MS.gene67682.t1 MTR_3g009470 39.000 100 56 4 179 278 244 338 1.35e-12 70.9
MS.gene67682.t1 MTR_1g078260 38.298 94 54 3 186 276 213 305 1.92e-12 70.1
MS.gene67682.t1 MTR_5g067680 52.632 57 25 1 219 273 203 259 7.95e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene67682.t1 AT5G15130 42.800 500 189 20 22 487 28 464 8.75e-90 287
MS.gene67682.t1 AT5G15130 42.562 484 183 19 37 487 1 422 6.62e-86 276
MS.gene67682.t1 AT1G18860 40.705 511 216 18 26 487 38 510 2.98e-79 259
MS.gene67682.t1 AT1G69810 38.056 360 172 11 27 383 23 334 9.74e-59 201
MS.gene67682.t1 AT4G04450 38.483 356 150 12 26 353 8 322 9.28e-54 189
MS.gene67682.t1 AT1G68150 81.633 98 18 0 202 299 219 316 1.98e-53 186
MS.gene67682.t1 AT4G04450 38.483 356 150 12 26 353 102 416 1.09e-52 188
MS.gene67682.t1 AT1G69810 37.654 324 151 11 63 383 1 276 5.53e-47 167
MS.gene67682.t1 AT1G62300 43.493 292 119 10 202 491 296 543 3.78e-45 168
MS.gene67682.t1 AT4G01720 77.778 81 18 0 198 278 219 299 1.12e-39 151
MS.gene67682.t1 AT4G31800 54.321 81 37 0 216 296 109 189 1.89e-26 108
MS.gene67682.t1 AT4G31800 54.321 81 37 0 216 296 174 254 2.81e-26 109
MS.gene67682.t1 AT2G25000 65.079 63 22 0 216 278 101 163 6.79e-25 103
MS.gene67682.t1 AT2G25000 65.079 63 22 0 216 278 101 163 6.79e-25 103
MS.gene67682.t1 AT2G25000 65.079 63 22 0 216 278 123 185 1.15e-24 103
MS.gene67682.t1 AT2G25000 65.079 63 22 0 216 278 144 206 1.43e-24 103
MS.gene67682.t1 AT1G80840 61.538 65 25 0 214 278 142 206 1.83e-24 104
MS.gene67682.t1 AT1G29860 36.364 154 85 4 202 355 120 260 1.22e-23 101
MS.gene67682.t1 AT5G56270 54.545 77 34 1 202 278 471 546 2.10e-23 105
MS.gene67682.t1 AT5G56270 51.667 60 27 2 219 278 274 331 5.92e-12 68.9
MS.gene67682.t1 AT4G26640 44.898 98 53 1 186 283 173 269 3.48e-23 102
MS.gene67682.t1 AT4G26640 37.069 116 60 5 210 314 25 138 5.56e-12 68.2
MS.gene67682.t1 AT4G26640 44.898 98 53 1 186 283 173 269 3.48e-23 102
MS.gene67682.t1 AT4G26640 37.069 116 60 5 210 314 25 138 5.56e-12 68.2
MS.gene67682.t1 AT4G26640 44.898 98 53 1 186 283 173 269 3.48e-23 102
MS.gene67682.t1 AT4G26640 37.069 116 60 5 210 314 25 138 5.56e-12 68.2
MS.gene67682.t1 AT4G26640 44.898 98 53 1 186 283 173 269 3.48e-23 102
MS.gene67682.t1 AT4G26640 37.069 116 60 5 210 314 25 138 5.56e-12 68.2
MS.gene67682.t1 AT4G26640 44.898 98 53 1 186 283 277 373 7.78e-23 102
MS.gene67682.t1 AT4G26640 46.479 71 34 3 210 278 129 197 9.56e-12 67.8
MS.gene67682.t1 AT4G26640 44.898 98 53 1 186 283 309 405 8.35e-23 102
MS.gene67682.t1 AT4G26640 46.479 71 34 3 210 278 161 229 9.66e-12 68.2
MS.gene67682.t1 AT4G26640 44.898 98 53 1 186 283 349 445 1.24e-22 102
MS.gene67682.t1 AT4G26640 46.479 71 34 3 210 278 201 269 1.14e-11 67.8
MS.gene67682.t1 AT2G03340 41.441 111 64 1 173 283 370 479 1.52e-22 101
MS.gene67682.t1 AT2G03340 50.746 67 30 3 212 278 245 308 2.35e-14 76.3
MS.gene67682.t1 AT4G30935 44.954 109 57 2 171 279 286 391 3.83e-22 100
MS.gene67682.t1 AT1G13960 44.792 96 46 2 189 278 374 468 5.71e-22 100
MS.gene67682.t1 AT1G13960 49.254 67 31 3 212 278 224 287 3.85e-13 72.4
MS.gene67682.t1 AT1G13960 52.703 74 34 1 205 278 243 315 9.87e-22 97.4
MS.gene67682.t1 AT1G13960 49.254 67 31 3 212 278 71 134 4.89e-13 71.2
MS.gene67682.t1 AT5G07100 51.282 78 37 1 201 278 124 200 1.10e-21 94.4
MS.gene67682.t1 AT5G07100 42.105 76 43 1 216 291 22 96 3.41e-12 66.6
MS.gene67682.t1 AT5G07100 51.282 78 37 1 201 278 124 200 1.10e-21 94.4
MS.gene67682.t1 AT5G07100 42.105 76 43 1 216 291 22 96 3.41e-12 66.6
MS.gene67682.t1 AT5G07100 51.282 78 37 1 201 278 124 200 1.10e-21 94.4
MS.gene67682.t1 AT5G07100 42.105 76 43 1 216 291 22 96 3.41e-12 66.6
MS.gene67682.t1 AT5G07100 51.282 78 37 1 201 278 124 200 1.10e-21 94.4
MS.gene67682.t1 AT5G07100 42.105 76 43 1 216 291 22 96 3.41e-12 66.6
MS.gene67682.t1 AT5G07100 51.282 78 37 1 201 278 217 293 1.32e-21 96.3
MS.gene67682.t1 AT5G07100 42.105 76 43 1 216 291 115 189 6.22e-12 67.4
MS.gene67682.t1 AT5G26170 50.685 73 35 1 204 276 99 170 1.82e-21 92.4
MS.gene67682.t1 AT5G41570 43.299 97 54 1 179 275 59 154 1.84e-21 92.4
MS.gene67682.t1 AT2G04880 52.000 75 35 1 204 278 269 342 1.85e-21 98.2
MS.gene67682.t1 AT2G04880 41.237 97 52 4 216 312 109 200 6.30e-13 71.6
MS.gene67682.t1 AT4G26440 35.028 177 98 5 169 345 326 485 1.88e-21 98.6
MS.gene67682.t1 AT4G26440 49.254 67 31 3 212 278 173 236 9.60e-12 68.2
MS.gene67682.t1 AT2G04880 52.000 75 35 1 204 278 293 366 3.11e-21 97.4
MS.gene67682.t1 AT2G04880 45.588 68 35 2 216 283 109 174 1.20e-12 70.9
MS.gene67682.t1 AT3G01080 51.351 74 35 1 205 278 331 403 1.31e-20 95.5
MS.gene67682.t1 AT2G30250 42.857 98 52 2 184 278 291 387 1.44e-20 94.7
MS.gene67682.t1 AT3G01080 51.351 74 35 1 205 278 293 365 1.49e-20 94.7
MS.gene67682.t1 AT2G44745 44.186 86 47 1 190 275 117 201 1.59e-20 90.9
MS.gene67682.t1 AT2G47260 43.137 102 52 2 198 294 154 254 1.76e-20 93.6
MS.gene67682.t1 AT5G49520 46.835 79 41 1 202 280 205 282 2.49e-20 94.0
MS.gene67682.t1 AT4G18170 36.090 133 78 3 181 313 141 266 4.29e-20 92.0
MS.gene67682.t1 AT5G46350 46.591 88 45 2 205 291 170 256 7.39e-20 91.3
MS.gene67682.t1 AT1G64000 52.113 71 33 1 205 275 101 170 1.97e-19 87.0
MS.gene67682.t1 AT5G28650 62.712 59 22 0 223 281 267 325 3.15e-19 89.7
MS.gene67682.t1 AT2G38470 29.832 238 134 5 167 404 311 515 3.75e-19 91.3
MS.gene67682.t1 AT2G38470 51.667 60 27 2 219 278 185 242 6.31e-13 71.6
MS.gene67682.t1 AT1G69310 42.574 101 51 2 175 275 110 203 5.18e-19 88.2
MS.gene67682.t1 AT1G69310 42.574 101 51 2 175 275 110 203 5.18e-19 88.2
MS.gene67682.t1 AT1G69310 42.574 101 51 2 175 275 110 203 5.18e-19 88.2
MS.gene67682.t1 AT5G64810 45.000 80 43 1 196 275 88 166 5.55e-19 85.9
MS.gene67682.t1 AT5G13080 47.368 76 39 1 205 280 54 128 6.65e-19 84.0
MS.gene67682.t1 AT1G55600 44.872 78 42 1 201 278 290 366 8.37e-19 90.1
MS.gene67682.t1 AT4G24240 52.778 72 32 1 213 284 278 347 8.70e-19 88.6
MS.gene67682.t1 AT3G04670 59.322 59 24 0 223 281 267 325 1.08e-18 87.8
MS.gene67682.t1 AT2G23320 59.322 59 24 0 219 277 241 299 1.60e-18 87.4
MS.gene67682.t1 AT1G29280 47.297 74 39 0 209 282 65 138 4.05e-18 84.7
MS.gene67682.t1 AT2G46130 51.351 74 35 1 202 275 14 86 4.48e-18 80.5
MS.gene67682.t1 AT4G39410 40.476 84 49 1 193 276 198 280 5.11e-18 85.5
MS.gene67682.t1 AT3G62340 48.193 83 42 1 197 279 97 178 6.31e-18 84.7
MS.gene67682.t1 AT2G30590 46.988 83 36 1 201 275 288 370 1.62e-17 85.1
MS.gene67682.t1 AT2G37260 54.412 68 30 1 213 280 264 330 2.11e-17 84.3
MS.gene67682.t1 AT2G37260 44.444 99 52 3 219 317 86 181 5.86e-17 83.2
MS.gene67682.t1 AT2G37260 54.412 68 30 1 213 280 262 328 2.19e-17 84.3
MS.gene67682.t1 AT2G37260 44.444 99 52 3 219 317 84 179 5.69e-17 83.2
MS.gene67682.t1 AT2G37260 56.923 65 27 1 216 280 347 410 4.23e-17 84.3
MS.gene67682.t1 AT2G37260 44.444 99 52 3 219 317 166 261 1.23e-16 82.8
MS.gene67682.t1 AT3G01970 47.297 74 38 1 204 277 51 123 5.72e-17 78.6
MS.gene67682.t1 AT4G31550 35.088 171 81 7 128 275 140 303 1.16e-16 81.6
MS.gene67682.t1 AT4G31550 46.154 78 35 2 198 275 232 302 2.03e-16 81.3
MS.gene67682.t1 AT2G24570 39.806 103 51 3 198 300 230 321 2.66e-16 80.9
MS.gene67682.t1 AT4G23550 44.156 77 43 0 217 293 139 215 2.34e-15 77.8
MS.gene67682.t1 AT1G30650 50.794 63 31 0 223 285 222 284 2.78e-15 79.0
MS.gene67682.t1 AT3G58710 53.125 64 30 0 218 281 71 134 3.70e-15 76.6
MS.gene67682.t1 AT3G58710 53.125 64 30 0 218 281 70 133 3.86e-15 76.3
MS.gene67682.t1 AT4G01250 46.479 71 38 0 218 288 128 198 3.86e-15 77.0
MS.gene67682.t1 AT2G34830 49.254 67 34 0 219 285 216 282 7.39e-15 77.4
MS.gene67682.t1 AT2G34830 49.254 67 34 0 219 285 225 291 8.83e-15 77.4
MS.gene67682.t1 AT4G31800 67.500 40 13 0 216 255 174 213 1.24e-14 74.3
MS.gene67682.t1 AT5G52830 48.571 70 36 0 219 288 166 235 2.47e-14 75.1
MS.gene67682.t1 AT1G69310 39.604 101 50 3 175 275 110 199 3.99e-14 73.6
MS.gene67682.t1 AT2G21900 45.161 62 33 1 217 278 108 168 5.78e-14 71.6
MS.gene67682.t1 AT2G46130 47.297 74 34 2 202 275 14 82 3.25e-13 66.6
MS.gene67682.t1 AT5G43290 51.724 58 27 1 218 275 114 170 4.21e-13 70.5
MS.gene67682.t1 AT5G24110 46.575 73 36 2 203 273 99 170 1.24e-12 69.3
MS.gene67682.t1 AT5G45050 35.780 109 68 1 170 278 995 1101 5.73e-12 69.3
MS.gene67682.t1 AT5G45050 35.780 109 68 1 170 278 1134 1240 6.15e-12 69.3
MS.gene67682.t1 AT5G45050 35.780 109 68 1 170 278 1106 1212 6.67e-12 69.3
MS.gene67682.t1 AT2G40740 45.333 75 36 2 218 287 173 247 8.64e-11 63.5

Find 112 sgRNAs with CRISPR-Local

Find 150 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCACTGGACTTGGAATATT+TGG 0.129902 8.4:-19102679 None:intergenic
GCAGCACTTTCTTCACTTAT+TGG 0.177197 8.4:+19104210 MS.gene67682:CDS
CAATGCATGGGATTTGATTC+AGG 0.243163 8.4:-19103946 None:intergenic
ATAAATAATCACCAATTAAT+TGG 0.256352 8.4:-19104496 None:intergenic
TCATCAAGTTCTAAAGTAAA+TGG 0.266329 8.4:+19104333 MS.gene67682:CDS
GGAAATGCAATTTAACAATA+TGG 0.281542 8.4:+19102399 MS.gene67682:CDS
AAGGGTATCTTGCTGGTAAT+TGG 0.281672 8.4:-19103900 None:intergenic
CAGGGTTGGATAGGTATAAT+TGG 0.281864 8.4:-19103762 None:intergenic
ATTCTGCATTTATTTCTTCA+TGG 0.288137 8.4:-19102468 None:intergenic
TTGTTCCTATTATTACTATA+TGG 0.291383 8.4:-19104006 None:intergenic
GAAATGGGCTGAGATGTTTC+AGG 0.315609 8.4:+19104290 MS.gene67682:CDS
ACAACTTCATCATCCTTTGT+AGG 0.329091 8.4:-19102718 None:intergenic
CATTTCCAGTGCTCGGTATT+CGG 0.345477 8.4:-19102383 None:intergenic
CAAACCCTAGCTTTCTTTGC+AGG 0.346131 8.4:-19102814 None:intergenic
ATCAACCATATAGTAATAAT+AGG 0.373148 8.4:+19104001 MS.gene67682:CDS
GATGATGTTGAAGAATTTGA+TGG 0.381044 8.4:-19103838 None:intergenic
TGAGACAACAAAAGCTCAAA+TGG 0.387526 8.4:+19102306 MS.gene67682:CDS
GCTAAAGCTGATTGAAAAGT+TGG 0.388661 8.4:-19104186 None:intergenic
GTCTTATTGAGTGTCTTACT+TGG 0.404266 8.4:-19102754 None:intergenic
GGATGCCAATGGAGAAAGTA+TGG 0.406659 8.4:+19103148 MS.gene67682:CDS
GTGGAAGAAGGGTATCTTGC+TGG 0.407507 8.4:-19103907 None:intergenic
CTTATTGGAAACACTAATCA+AGG 0.409882 8.4:+19104225 MS.gene67682:CDS
CCATTCTGTGTATTGTTCAC+TGG 0.411705 8.4:-19104387 None:intergenic
CAAACCAACAACAATCTTCA+TGG 0.413700 8.4:+19103703 MS.gene67682:CDS
TTTGTCCATACTTTCTCCAT+TGG 0.414359 8.4:-19103153 None:intergenic
CATCTGGTAGATAGAAGTTT+AGG 0.417802 8.4:-19103726 None:intergenic
AATCTAAGCACTTTAAACTT+TGG 0.426376 8.4:+19104033 MS.gene67682:CDS
ATTTGAGTCAGAAAATGAAA+TGG 0.439076 8.4:+19104274 MS.gene67682:CDS
GGAAGAGTTGTCACTTGGAT+TGG 0.439103 8.4:+19102609 MS.gene67682:CDS
TTTGAGTAGTAGCATAATTG+AGG 0.451637 8.4:-19103978 None:intergenic
TTGTTGTTGGTTTGTGCTGA+TGG 0.452268 8.4:-19103694 None:intergenic
GGTTCATCAACCTCCAACTC+TGG 0.460772 8.4:+19103664 MS.gene67682:CDS
TTGGGCGAGGATATTGTGCT+TGG 0.464830 8.4:-19102033 None:intergenic
ATCATGTCCAGTTAGAAAAC+AGG 0.466304 8.4:+19103231 MS.gene67682:CDS
GCCGCATCGATGCTATTATC+AGG 0.467031 8.4:+19103643 MS.gene67682:CDS
ATGATAGTGCAGGGTTGGAT+AGG 0.467366 8.4:-19103771 None:intergenic
AAACTCCTGCAAAGAAAGCT+AGG 0.468281 8.4:+19102809 MS.gene67682:CDS
GATCTTTCAGTATTAGCAAT+GGG 0.469342 8.4:-19101997 None:intergenic
TTTGAGTCAGAAAATGAAAT+GGG 0.477793 8.4:+19104275 MS.gene67682:CDS
CGATGCGGCCGCGGAAGTTG+TGG 0.478396 8.4:-19103629 None:intergenic
GATCTTGTTTCCCTCAGCCT+TGG 0.480636 8.4:+19102493 MS.gene67682:CDS
GTGAGGTCAAGAGTGATAGT+TGG 0.491969 8.4:-19103808 None:intergenic
AACAAGGAAGAGTTGTCACT+TGG 0.493048 8.4:+19102604 MS.gene67682:CDS
TTCTCAAAACAGATGAATGA+TGG 0.497069 8.4:+19103127 MS.gene67682:intron
AAATTTGAAACATCAAAATC+AGG 0.497604 8.4:+19102637 MS.gene67682:CDS
TAAATTGCATTTCCAGTGCT+CGG 0.498132 8.4:-19102390 None:intergenic
TCAGAACTATTCACTGGACT+TGG 0.498507 8.4:-19102688 None:intergenic
CTAAAGCTAAGAGTGGAAGA+AGG 0.503500 8.4:-19103919 None:intergenic
CGATAGTAAGCTCGAGGGCA+AGG 0.506033 8.4:-19103193 None:intergenic
TTCAAGTTTCTTGAACAAAA+CGG 0.507107 8.4:+19104362 MS.gene67682:CDS
AGTTCTAAAGTAAATGGTTG+TGG 0.510261 8.4:+19104339 MS.gene67682:CDS
TTTACTTTAGAACTTGATGA+AGG 0.512151 8.4:-19104330 None:intergenic
TAGGCCATGAAGATTGTTGT+TGG 0.513416 8.4:-19103707 None:intergenic
TTATTGAGTGTCTTACTTGG+TGG 0.519260 8.4:-19102751 None:intergenic
TTGAGATGATAGTGCAGGGT+TGG 0.519761 8.4:-19103776 None:intergenic
CTGAATCAAATCCCATGCAT+TGG 0.522577 8.4:+19103947 MS.gene67682:CDS
GCCATGGCTGTTGCTGAAAG+TGG 0.522889 8.4:-19103604 None:intergenic
CGCGGAAGTTGTGGAAGCCA+TGG 0.523187 8.4:-19103620 None:intergenic
AAAAGTGCTTCTGCATCTCC+TGG 0.524615 8.4:+19104453 MS.gene67682:CDS
AATTTGATGGGTTTGAAGTG+AGG 0.528347 8.4:-19103825 None:intergenic
GGTGCAGAAAATGGCAAAGA+AGG 0.529278 8.4:-19104429 None:intergenic
TAGGAACTCTTCCAAGGCTG+AGG 0.532985 8.4:-19102504 None:intergenic
TCCACTTTCAGCAACAGCCA+TGG 0.540367 8.4:+19103603 MS.gene67682:CDS
CTTGAGTTGAATCTAACAAA+GGG 0.541322 8.4:-19103862 None:intergenic
TCAAACATTTCACAACATGT+AGG 0.542220 8.4:+19104114 MS.gene67682:CDS
GGGAATCAAAATCAAAGTGC+AGG 0.547602 8.4:+19104246 MS.gene67682:CDS
GAGACAACAAAAGCTCAAAT+GGG 0.551564 8.4:+19102307 MS.gene67682:CDS
CCAGTGAACAATACACAGAA+TGG 0.554001 8.4:+19104387 MS.gene67682:CDS
ACTGAAAGATCAATTGAGGC+TGG 0.554571 8.4:+19102009 MS.gene67682:CDS
AAATCAGGTAGCACAACTGA+AGG 0.555466 8.4:+19102652 MS.gene67682:CDS
TGATCTTTCAGTATTAGCAA+TGG 0.556800 8.4:-19101998 None:intergenic
GAGGAAGCTATTCCAATGCA+TGG 0.564369 8.4:-19103959 None:intergenic
ACAACTTCAGAACTATTCAC+TGG 0.564505 8.4:-19102694 None:intergenic
ATGATGAAGTTGTAGAGACT+TGG 0.570390 8.4:+19102728 MS.gene67682:CDS
TTCTGAAGTTGTTCCTACAA+AGG 0.571242 8.4:+19102705 MS.gene67682:CDS
ATGATGTTGAAGAATTTGAT+GGG 0.574839 8.4:-19103837 None:intergenic
AGGAAGCTATTCCAATGCAT+GGG 0.575316 8.4:-19103958 None:intergenic
TGGCTGTTGCTGAAAGTGGA+AGG 0.576476 8.4:-19103600 None:intergenic
AATGACCGAATACCGAGCAC+TGG 0.578776 8.4:+19102378 MS.gene67682:CDS
AGGAGAACTAAAGCTAAGAG+TGG 0.580510 8.4:-19103926 None:intergenic
TAAAGCTAAGAGTGGAAGAA+GGG 0.581456 8.4:-19103918 None:intergenic
TTGCTGAAAGTGGAAGGCTG+TGG 0.584244 8.4:-19103594 None:intergenic
TGTTACTAGGAACTCTTCCA+AGG 0.584869 8.4:-19102510 None:intergenic
TAATACTGAAAGATCAATTG+AGG 0.589489 8.4:+19102005 MS.gene67682:CDS
AACAAAAGCTCAAATGGGTG+AGG 0.591231 8.4:+19102312 MS.gene67682:CDS
TAATAGCATCGATGCGGCCG+CGG 0.591990 8.4:-19103638 None:intergenic
CATGGCTTCCACAACTTCCG+CGG 0.593483 8.4:+19103621 MS.gene67682:CDS
AACTCCTGCAAAGAAAGCTA+GGG 0.594594 8.4:+19102810 MS.gene67682:CDS
GAATGTTGAGATGATAGTGC+AGG 0.594784 8.4:-19103781 None:intergenic
TGGCATTGAACCAGAGTTGG+AGG 0.598647 8.4:-19103674 None:intergenic
AGGAACTCTTCCAAGGCTGA+GGG 0.600114 8.4:-19102503 None:intergenic
GCTTGAGTTGAATCTAACAA+AGG 0.603483 8.4:-19103863 None:intergenic
TCAGGTACAAAGATGTGTTG+AGG 0.608124 8.4:+19103531 MS.gene67682:intron
CTAAACTTCTATCTACCAGA+TGG 0.611735 8.4:+19103727 MS.gene67682:CDS
TAAGACAATGAGAGATGCTG+AGG 0.621356 8.4:+19102771 MS.gene67682:CDS
TGATGGCATTGAACCAGAGT+TGG 0.628021 8.4:-19103677 None:intergenic
TTCTAATCACAACATACGAA+GGG 0.629312 8.4:+19103563 MS.gene67682:CDS
TAGACAAGTATTTACCGTTG+GGG 0.632603 8.4:-19102857 None:intergenic
GTGCAACGATAGTAAGCTCG+AGG 0.633302 8.4:-19103199 None:intergenic
TTATTGGAAACACTAATCAA+GGG 0.641347 8.4:+19104226 MS.gene67682:CDS
ATTCTAATCACAACATACGA+AGG 0.641504 8.4:+19103562 MS.gene67682:CDS
AATCAGGTAGCACAACTGAA+GGG 0.644837 8.4:+19102653 MS.gene67682:CDS
AGATGAATGATGGATGCCAA+TGG 0.647635 8.4:+19103137 MS.gene67682:intron
AGCAAGATGTGACACCCCAA+CGG 0.667652 8.4:+19102843 MS.gene67682:CDS
CTTTGGTAGACAAAACACAA+TGG 0.673621 8.4:+19104050 MS.gene67682:CDS
AGGTGAGAGAAGAAAATCAA+CGG 0.684567 8.4:+19102332 MS.gene67682:CDS
TTGTCACTATTATCACCACC+AGG 0.684962 8.4:-19104471 None:intergenic
TGCAACGATAGTAAGCTCGA+GGG 0.697067 8.4:-19103198 None:intergenic
AGTGCTTCTGCATCTCCTGG+TGG 0.699273 8.4:+19104456 MS.gene67682:CDS
ACCTGATAATAGCATCGATG+CGG 0.704481 8.4:-19103644 None:intergenic
TAATGATGAAGAATTCAACA+AGG 0.709467 8.4:+19102588 MS.gene67682:CDS
AATGTTGAGATGATAGTGCA+GGG 0.717220 8.4:-19103780 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTGAGTTTAATTTTATA+TGG + chr8.4:19102170-19102189 MS.gene67682:intron 10.0%
!!! AAAATTAACCTTATCATTTT+TGG - chr8.4:19102055-19102074 None:intergenic 15.0%
!!! AAATTAACCTTATCATTTTT+GGG - chr8.4:19102054-19102073 None:intergenic 15.0%
!!! AATAGAATCTAAAGTATTTT+TGG + chr8.4:19103324-19103343 MS.gene67682:intron 15.0%
!! ATCAACCATATAGTAATAAT+AGG + chr8.4:19104001-19104020 MS.gene67682:CDS 20.0%
!! ATCGAATTTGATATAAAATG+AGG - chr8.4:19102891-19102910 None:intergenic 20.0%
!! TTGTTCCTATTATTACTATA+TGG - chr8.4:19104009-19104028 None:intergenic 20.0%
!!! AAATTTGAAACATCAAAATC+AGG + chr8.4:19102637-19102656 MS.gene67682:CDS 20.0%
!!! AAGTTTTTCTCTTAATCTAA+TGG + chr8.4:19103004-19103023 MS.gene67682:intron 20.0%
!!! ACTTCTCTATTTTAATCTAA+CGG - chr8.4:19102940-19102959 None:intergenic 20.0%
!!! TGAGTTTAATTTTATATGGA+CGG + chr8.4:19102174-19102193 MS.gene67682:intron 20.0%
!!! TTTTTTGGAATATTGTTACT+AGG - chr8.4:19102526-19102545 None:intergenic 20.0%
! AATCTAAGCACTTTAAACTT+TGG + chr8.4:19104033-19104052 MS.gene67682:CDS 25.0%
! ACATGAGTACTAATTGAAAT+TGG - chr8.4:19102246-19102265 None:intergenic 25.0%
! ATATCAAATTCGATGTTACA+TGG + chr8.4:19102897-19102916 MS.gene67682:intron 25.0%
! ATCAAAGTGTGAACAAATTA+TGG - chr8.4:19103107-19103126 None:intergenic 25.0%
! ATGATGTTGAAGAATTTGAT+GGG - chr8.4:19103840-19103859 None:intergenic 25.0%
! ATTTGAGTCAGAAAATGAAA+TGG + chr8.4:19104274-19104293 MS.gene67682:CDS 25.0%
! CACATGTAATTATGAATTTC+AGG + chr8.4:19103513-19103532 MS.gene67682:intron 25.0%
! CTACAATGACATTTAATTGA+AGG + chr8.4:19103422-19103441 MS.gene67682:intron 25.0%
! CTGAAATTCATAATTACATG+TGG - chr8.4:19103515-19103534 None:intergenic 25.0%
! GGAAATGCAATTTAACAATA+TGG + chr8.4:19102399-19102418 MS.gene67682:CDS 25.0%
! TAATACTGAAAGATCAATTG+AGG + chr8.4:19102005-19102024 MS.gene67682:CDS 25.0%
! TAATGATGAAGAATTCAACA+AGG + chr8.4:19102588-19102607 MS.gene67682:CDS 25.0%
! TATGGACAAAAAATTGCAAA+GGG + chr8.4:19103166-19103185 MS.gene67682:CDS 25.0%
! TGTTGCAATTACATGTTTAT+AGG + chr8.4:19102270-19102289 MS.gene67682:intron 25.0%
! TTATTGGAAACACTAATCAA+GGG + chr8.4:19104226-19104245 MS.gene67682:CDS 25.0%
! TTTGAGTCAGAAAATGAAAT+GGG + chr8.4:19104275-19104294 MS.gene67682:CDS 25.0%
!! ATTCTGCATTTATTTCTTCA+TGG - chr8.4:19102471-19102490 None:intergenic 25.0%
!! TTCAAGTTTCTTGAACAAAA+CGG + chr8.4:19104362-19104381 MS.gene67682:CDS 25.0%
!!! ACTTTCTCTTGATCATTTTT+TGG - chr8.4:19102541-19102560 None:intergenic 25.0%
!!! ATTGTTGTTTTTTTGCATGT+AGG - chr8.4:19104091-19104110 None:intergenic 25.0%
!!! GAGTTTAATTTTATATGGAC+GGG + chr8.4:19102175-19102194 MS.gene67682:intron 25.0%
!!! TATTTTAATCTAACGGTCTA+TGG - chr8.4:19102933-19102952 None:intergenic 25.0%
!!! TCATCAAGTTCTAAAGTAAA+TGG + chr8.4:19104333-19104352 MS.gene67682:CDS 25.0%
!!! TTTACTTTAGAACTTGATGA+AGG - chr8.4:19104333-19104352 None:intergenic 25.0%
ATAGACAAGTATTTACCGTT+GGG - chr8.4:19102861-19102880 None:intergenic 30.0%
ATTCTAATCACAACATACGA+AGG + chr8.4:19103562-19103581 MS.gene67682:CDS 30.0%
CAAGTAGAATCACTAAAAGT+CGG - chr8.4:19102134-19102153 None:intergenic 30.0%
CTTATTGGAAACACTAATCA+AGG + chr8.4:19104225-19104244 MS.gene67682:CDS 30.0%
GATATATGCGTAAAGTTTCT+AGG - chr8.4:19103380-19103399 None:intergenic 30.0%
GATCTTTCAGTATTAGCAAT+GGG - chr8.4:19102000-19102019 None:intergenic 30.0%
GATGATGTTGAAGAATTTGA+TGG - chr8.4:19103841-19103860 None:intergenic 30.0%
GTATGGACAAAAAATTGCAA+AGG + chr8.4:19103165-19103184 MS.gene67682:CDS 30.0%
TCAAACATTTCACAACATGT+AGG + chr8.4:19104114-19104133 MS.gene67682:CDS 30.0%
TCTCTTAATCTAATGGTGTA+CGG + chr8.4:19103011-19103030 MS.gene67682:intron 30.0%
TGATCTTTCAGTATTAGCAA+TGG - chr8.4:19102001-19102020 None:intergenic 30.0%
TTCTAATCACAACATACGAA+GGG + chr8.4:19103563-19103582 MS.gene67682:CDS 30.0%
TTCTCAAAACAGATGAATGA+TGG + chr8.4:19103127-19103146 MS.gene67682:intron 30.0%
TTTGAGTAGTAGCATAATTG+AGG - chr8.4:19103981-19104000 None:intergenic 30.0%
! ATATGTACCTGTTTTCTAAC+TGG - chr8.4:19103241-19103260 None:intergenic 30.0%
!! AGTTCTAAAGTAAATGGTTG+TGG + chr8.4:19104339-19104358 MS.gene67682:CDS 30.0%
!! CTTGAGTTGAATCTAACAAA+GGG - chr8.4:19103865-19103884 None:intergenic 30.0%
!!! TGTTTTTTTGCATGTAGGTT+TGG - chr8.4:19104086-19104105 None:intergenic 30.0%
ACAACTTCAGAACTATTCAC+TGG - chr8.4:19102697-19102716 None:intergenic 35.0%
ACAACTTCATCATCCTTTGT+AGG - chr8.4:19102721-19102740 None:intergenic 35.0%
AGGTGAGAGAAGAAAATCAA+CGG + chr8.4:19102332-19102351 MS.gene67682:CDS 35.0%
ATCATGTCCAGTTAGAAAAC+AGG + chr8.4:19103231-19103250 MS.gene67682:CDS 35.0%
ATGATGAAGTTGTAGAGACT+TGG + chr8.4:19102728-19102747 MS.gene67682:CDS 35.0%
CAAACCAACAACAATCTTCA+TGG + chr8.4:19103703-19103722 MS.gene67682:CDS 35.0%
CATCTGGTAGATAGAAGTTT+AGG - chr8.4:19103729-19103748 None:intergenic 35.0%
CCTCAAGCACAAAATATGAT+TGG - chr8.4:19103402-19103421 None:intergenic 35.0%
CTAAACTTCTATCTACCAGA+TGG + chr8.4:19103727-19103746 MS.gene67682:CDS 35.0%
CTTTGGTAGACAAAACACAA+TGG + chr8.4:19104050-19104069 MS.gene67682:CDS 35.0%
GAGACAACAAAAGCTCAAAT+GGG + chr8.4:19102307-19102326 MS.gene67682:CDS 35.0%
GATAGACAAGTATTTACCGT+TGG - chr8.4:19102862-19102881 None:intergenic 35.0%
GCTAAAGCTGATTGAAAAGT+TGG - chr8.4:19104189-19104208 None:intergenic 35.0%
TAAAGCTAAGAGTGGAAGAA+GGG - chr8.4:19103921-19103940 None:intergenic 35.0%
TAAATTGCATTTCCAGTGCT+CGG - chr8.4:19102393-19102412 None:intergenic 35.0%
TAGACAAGTATTTACCGTTG+GGG - chr8.4:19102860-19102879 None:intergenic 35.0%
TGAGACAACAAAAGCTCAAA+TGG + chr8.4:19102306-19102325 MS.gene67682:CDS 35.0%
TTATTGAGTGTCTTACTTGG+TGG - chr8.4:19102754-19102773 None:intergenic 35.0%
TTCACTGGACTTGGAATATT+TGG - chr8.4:19102682-19102701 None:intergenic 35.0%
TTTGTCCATACTTTCTCCAT+TGG - chr8.4:19103156-19103175 None:intergenic 35.0%
! AATGTTGAGATGATAGTGCA+GGG - chr8.4:19103783-19103802 None:intergenic 35.0%
! CCAATCATATTTTGTGCTTG+AGG + chr8.4:19103399-19103418 MS.gene67682:intron 35.0%
! GTCTTATTGAGTGTCTTACT+TGG - chr8.4:19102757-19102776 None:intergenic 35.0%
! TGTTTTCTAACTGGACATGA+TGG - chr8.4:19103232-19103251 None:intergenic 35.0%
!! AATTTGATGGGTTTGAAGTG+AGG - chr8.4:19103828-19103847 None:intergenic 35.0%
!! GCTTGAGTTGAATCTAACAA+AGG - chr8.4:19103866-19103885 None:intergenic 35.0%
!! TGGTTTGATTTTGAACCATC+TGG - chr8.4:19103745-19103764 None:intergenic 35.0%
!! TTCTGAAGTTGTTCCTACAA+AGG + chr8.4:19102705-19102724 MS.gene67682:CDS 35.0%
AAACTCCTGCAAAGAAAGCT+AGG + chr8.4:19102809-19102828 MS.gene67682:CDS 40.0%
AAATCAGGTAGCACAACTGA+AGG + chr8.4:19102652-19102671 MS.gene67682:CDS 40.0%
AACAAAAGCTCAAATGGGTG+AGG + chr8.4:19102312-19102331 MS.gene67682:CDS 40.0%
AACAAGGAAGAGTTGTCACT+TGG + chr8.4:19102604-19102623 MS.gene67682:CDS 40.0%
AACTCCTGCAAAGAAAGCTA+GGG + chr8.4:19102810-19102829 MS.gene67682:CDS 40.0%
AATCAGGTAGCACAACTGAA+GGG + chr8.4:19102653-19102672 MS.gene67682:CDS 40.0%
ACTGAAAGATCAATTGAGGC+TGG + chr8.4:19102009-19102028 MS.gene67682:CDS 40.0%
AGGAAGCTATTCCAATGCAT+GGG - chr8.4:19103961-19103980 None:intergenic 40.0%
AGGAGAACTAAAGCTAAGAG+TGG - chr8.4:19103929-19103948 None:intergenic 40.0%
ATCCTCGCCCAAAAATGATA+AGG + chr8.4:19102044-19102063 MS.gene67682:CDS 40.0%
CAATGCATGGGATTTGATTC+AGG - chr8.4:19103949-19103968 None:intergenic 40.0%
CAGGGTTGGATAGGTATAAT+TGG - chr8.4:19103765-19103784 None:intergenic 40.0%
CCAGTGAACAATACACAGAA+TGG + chr8.4:19104387-19104406 MS.gene67682:CDS 40.0%
CCATTCTGTGTATTGTTCAC+TGG - chr8.4:19104390-19104409 None:intergenic 40.0%
CTAAAGCTAAGAGTGGAAGA+AGG - chr8.4:19103922-19103941 None:intergenic 40.0%
CTGAATCAAATCCCATGCAT+TGG + chr8.4:19103947-19103966 MS.gene67682:CDS 40.0%
GCAGCACTTTCTTCACTTAT+TGG + chr8.4:19104210-19104229 MS.gene67682:CDS 40.0%
GGGAATCAAAATCAAAGTGC+AGG + chr8.4:19104246-19104265 MS.gene67682:CDS 40.0%
TAAGACAATGAGAGATGCTG+AGG + chr8.4:19102771-19102790 MS.gene67682:CDS 40.0%
TAGGCCATGAAGATTGTTGT+TGG - chr8.4:19103710-19103729 None:intergenic 40.0%
TCAGAACTATTCACTGGACT+TGG - chr8.4:19102691-19102710 None:intergenic 40.0%
TCAGGTACAAAGATGTGTTG+AGG + chr8.4:19103531-19103550 MS.gene67682:intron 40.0%
TGTTACTAGGAACTCTTCCA+AGG - chr8.4:19102513-19102532 None:intergenic 40.0%
TTGTCACTATTATCACCACC+AGG - chr8.4:19104474-19104493 None:intergenic 40.0%
! GAATGTTGAGATGATAGTGC+AGG - chr8.4:19103784-19103803 None:intergenic 40.0%
!! AACCTTATCATTTTTGGGCG+AGG - chr8.4:19102049-19102068 None:intergenic 40.0%
!! AAGGGTATCTTGCTGGTAAT+TGG - chr8.4:19103903-19103922 None:intergenic 40.0%
!! ACCTGATAATAGCATCGATG+CGG - chr8.4:19103647-19103666 None:intergenic 40.0%
!! AGATGAATGATGGATGCCAA+TGG + chr8.4:19103137-19103156 MS.gene67682:intron 40.0%
!! GCACTTTTAGGTGCAGAAAA+TGG - chr8.4:19104441-19104460 None:intergenic 40.0%
!! TTGTTGTTGGTTTGTGCTGA+TGG - chr8.4:19103697-19103716 None:intergenic 40.0%
CATTTCCAGTGCTCGGTATT+CGG - chr8.4:19102386-19102405 None:intergenic 45.0%
GAGGAAGCTATTCCAATGCA+TGG - chr8.4:19103962-19103981 None:intergenic 45.0%
GGATGCCAATGGAGAAAGTA+TGG + chr8.4:19103148-19103167 MS.gene67682:CDS 45.0%
GGTGCAGAAAATGGCAAAGA+AGG - chr8.4:19104432-19104451 None:intergenic 45.0%
GTGAGGTCAAGAGTGATAGT+TGG - chr8.4:19103811-19103830 None:intergenic 45.0%
TGCAACGATAGTAAGCTCGA+GGG - chr8.4:19103201-19103220 None:intergenic 45.0%
! ATGATAGTGCAGGGTTGGAT+AGG - chr8.4:19103774-19103793 None:intergenic 45.0%
! CAAACCCTAGCTTTCTTTGC+AGG - chr8.4:19102817-19102836 None:intergenic 45.0%
! GGAAGAGTTGTCACTTGGAT+TGG + chr8.4:19102609-19102628 MS.gene67682:CDS 45.0%
! TGATGGCATTGAACCAGAGT+TGG - chr8.4:19103680-19103699 None:intergenic 45.0%
! TTGAGATGATAGTGCAGGGT+TGG - chr8.4:19103779-19103798 None:intergenic 45.0%
!! AAAAGTGCTTCTGCATCTCC+TGG + chr8.4:19104453-19104472 MS.gene67682:CDS 45.0%
!! GAAATGGGCTGAGATGTTTC+AGG + chr8.4:19104290-19104309 MS.gene67682:CDS 45.0%
!!! GGAGATGCAGAAGCACTTTT+AGG - chr8.4:19104453-19104472 None:intergenic 45.0%
!! AATTCAATAAAAATTAATAA+CGG - chr8.4:19102086-19102105 None:intergenic 5.0%
!!! ATTAATTTTTATTGAATTAT+TGG + chr8.4:19102088-19102107 MS.gene67682:intron 5.0%
AATGACCGAATACCGAGCAC+TGG + chr8.4:19102378-19102397 MS.gene67682:CDS 50.0%
AGCAAGATGTGACACCCCAA+CGG + chr8.4:19102843-19102862 MS.gene67682:CDS 50.0%
AGGAACTCTTCCAAGGCTGA+GGG - chr8.4:19102506-19102525 None:intergenic 50.0%
GGTTCATCAACCTCCAACTC+TGG + chr8.4:19103664-19103683 MS.gene67682:CDS 50.0%
GTGCAACGATAGTAAGCTCG+AGG - chr8.4:19103202-19103221 None:intergenic 50.0%
TAGGAACTCTTCCAAGGCTG+AGG - chr8.4:19102507-19102526 None:intergenic 50.0%
TCCACTTTCAGCAACAGCCA+TGG + chr8.4:19103603-19103622 MS.gene67682:CDS 50.0%
TGGCTGTTGCTGAAAGTGGA+AGG - chr8.4:19103603-19103622 None:intergenic 50.0%
TTGCTGAAAGTGGAAGGCTG+TGG - chr8.4:19103597-19103616 None:intergenic 50.0%
TTGGGCGAGGATATTGTGCT+TGG - chr8.4:19102036-19102055 None:intergenic 50.0%
! GATCTTGTTTCCCTCAGCCT+TGG + chr8.4:19102493-19102512 MS.gene67682:CDS 50.0%
! GCCGCATCGATGCTATTATC+AGG + chr8.4:19103643-19103662 MS.gene67682:CDS 50.0%
! TGGCATTGAACCAGAGTTGG+AGG - chr8.4:19103677-19103696 None:intergenic 50.0%
!! GTGGAAGAAGGGTATCTTGC+TGG - chr8.4:19103910-19103929 None:intergenic 50.0%
AGTGCTTCTGCATCTCCTGG+TGG + chr8.4:19104456-19104475 MS.gene67682:CDS 55.0%
CATGGCTTCCACAACTTCCG+CGG + chr8.4:19103621-19103640 MS.gene67682:CDS 55.0%
CGATAGTAAGCTCGAGGGCA+AGG - chr8.4:19103196-19103215 None:intergenic 55.0%
GCCATGGCTGTTGCTGAAAG+TGG - chr8.4:19103607-19103626 None:intergenic 55.0%
!! TAATAGCATCGATGCGGCCG+CGG - chr8.4:19103641-19103660 None:intergenic 55.0%
CGCGGAAGTTGTGGAAGCCA+TGG - chr8.4:19103623-19103642 None:intergenic 60.0%
CGATGCGGCCGCGGAAGTTG+TGG - chr8.4:19103632-19103651 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 19101991 19104503 19101991 ID=MS.gene67682
chr8.4 mRNA 19101991 19104503 19101991 ID=MS.gene67682.t1;Parent=MS.gene67682
chr8.4 exon 19101991 19102065 19101991 ID=MS.gene67682.t1.exon1;Parent=MS.gene67682.t1
chr8.4 CDS 19101991 19102065 19101991 ID=cds.MS.gene67682.t1;Parent=MS.gene67682.t1
chr8.4 exon 19102292 19102864 19102292 ID=MS.gene67682.t1.exon2;Parent=MS.gene67682.t1
chr8.4 CDS 19102292 19102864 19102292 ID=cds.MS.gene67682.t1;Parent=MS.gene67682.t1
chr8.4 exon 19103139 19103252 19103139 ID=MS.gene67682.t1.exon3;Parent=MS.gene67682.t1
chr8.4 CDS 19103139 19103252 19103139 ID=cds.MS.gene67682.t1;Parent=MS.gene67682.t1
chr8.4 exon 19103535 19104503 19103535 ID=MS.gene67682.t1.exon4;Parent=MS.gene67682.t1
chr8.4 CDS 19103535 19104503 19103535 ID=cds.MS.gene67682.t1;Parent=MS.gene67682.t1
Gene Sequence

>MS.gene67682

GAAGCACCCATTGCTAATACTGAAAGATCAATTGAGGCTGGTCCAAGCACAATATCCTCGCCCAAAAATGATAAGGTTAATTTTATATAACACCGTTATTAATTTTTATTGAATTATTGGTGTCAACGTAGTTGAGATGACCGACTTTTAGTGATTCTACTTGTTTTTCGATTAAGAAAATATTGAGTTTAATTTTATATGGACGGGATATAAAAATATTTTATATACGAGTCAAATTAAAAACAAATTATACCAATTTCAATTAGTACTCATGTCACATGTTGCAATTACATGTTTATAGGTTGATGATCAGCTTGAGACAACAAAAGCTCAAATGGGTGAGGTGAGAGAAGAAAATCAACGGTTAAAGATGTGCTTGAACAAAATAATGACCGAATACCGAGCACTGGAAATGCAATTTAACAATATGGTTAAGCAAGAAACAAAAAAGAGCAATGTTGATCACAATGATAATAACCATGAAGAAATAAATGCAGAATCAGATCTTGTTTCCCTCAGCCTTGGAAGAGTTCCTAGTAACAATATTCCAAAAAATGATCAAGAGAAAGTTAACAAAGTGTCTAAACTAGCATTGAATAATGATGAAGAATTCAACAAGGAAGAGTTGTCACTTGGATTGGAGTGTAAATTTGAAACATCAAAATCAGGTAGCACAACTGAAGGGTTACCAAATATTCCAAGTCCAGTGAATAGTTCTGAAGTTGTTCCTACAAAGGATGATGAAGTTGTAGAGACTTGGCCACCAAGTAAGACACTCAATAAGACAATGAGAGATGCTGAGGAAGAAGTTGCTCAACAAACTCCTGCAAAGAAAGCTAGGGTTTGTGTTAGAGCAAGATGTGACACCCCAACGGTAAATACTTGTCTATCTTCTCACCTCATTTTATATCAAATTCGATGTTACATGGTGTAGTTCGACCATAGACCGTTAGATTAAAATAGAGAAGTTGTGCGTTAAGATATTATTTACAATACATTTCAAGTACATTAAAAAGTTTTTCTCTTAATCTAATGGTGTACGGTAAACTGTACTATTTACTAATTTTTTAACTTCAACACACACAAATGTAGTACTTACTAAAAATAAGAAAGCCATAATTTGTTCACACTTTGATTTCTCAAAACAGATGAATGATGGATGCCAATGGAGAAAGTATGGACAAAAAATTGCAAAGGGAAATCCTTGCCCTCGAGCTTACTATCGTTGCACAGTTGCACCATCATGTCCAGTTAGAAAACAGGTACATATATATTTTTACATTACACTCTCATGTTGTCATTGAGTTTCAGTTGTTATTGATCATTTACACAAAATAGAATCTAAAGTATTTTTGGTCAAAAAAGAATCTAAACTATTATTTAGCACCTAGAAACTTTACGCATATATCCAATCATATTTTGTGCTTGAGGCTACAATGACATTTAATTGAAGGTTTGTATAAACTTTTTTAAATTATATATGCATATAATAGCTAAACTATTTCACGTATCTAAATTGCACCACATGTAATTATGAATTTCAGGTACAAAGATGTGTTGAGGACATGTCTATTCTAATCACAACATACGAAGGGACACACAACCACAGCCTTCCACTTTCAGCAACAGCCATGGCTTCCACAACTTCCGCGGCCGCATCGATGCTATTATCAGGTTCATCAACCTCCAACTCTGGTTCAATGCCATCAGCACAAACCAACAACAATCTTCATGGCCTAAACTTCTATCTACCAGATGGTTCAAAATCAAACCAATTATACCTATCCAACCCTGCACTATCATCTCAACATTCACATCCAACTATCACTCTTGACCTCACTTCAAACCCATCAAATTCTTCAACATCATCACCCTTTGTTAGATTCAACTCAAGCTACAACAACAATAACCAATTACCAGCAAGATACCCTTCTTCCACTCTTAGCTTTAGTTCTCCTGAATCAAATCCCATGCATTGGAATAGCTTCCTCAATTATGCTACTACTCAAAATCAACCATATAGTAATAATAGGAACAATAATAATCTAAGCACTTTAAACTTTGGTAGACAAAACACAATGGAAAGTATATACCAAACCTACATGCAAAAAAACAACAATAGTTCAAACATTTCACAACATGTAGGTTTACAAGATAGTACTATATCTGCAGCAACAAAAGCTATCACAGCAGATCCAACTTTTCAATCAGCTTTAGCTGCAGCACTTTCTTCACTTATTGGAAACACTAATCAAGGGAATCAAAATCAAAGTGCAGGAGAAAATTTGAGTCAGAAAATGAAATGGGCTGAGATGTTTCAGGTTTCTTCTACTTCATTGCCTTCATCAAGTTCTAAAGTAAATGGTTGTGGTTCAAGTTTCTTGAACAAAACGGCACCAGTGAACAATACACAGAATGGAAGTTTGATGTTGTTATCTCCTTCTTTGCCATTTTCTGCACCTAAAAGTGCTTCTGCATCTCCTGGTGGTGATAATAGTGACAATACCAATTAA

Protein sequence

>MS.gene67682.t1

EAPIANTERSIEAGPSTISSPKNDKVDDQLETTKAQMGEVREENQRLKMCLNKIMTEYRALEMQFNNMVKQETKKSNVDHNDNNHEEINAESDLVSLSLGRVPSNNIPKNDQEKVNKVSKLALNNDEEFNKEELSLGLECKFETSKSGSTTEGLPNIPSPVNSSEVVPTKDDEVVETWPPSKTLNKTMRDAEEEVAQQTPAKKARVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPSCPVRKQVQRCVEDMSILITTYEGTHNHSLPLSATAMASTTSAAASMLLSGSSTSNSGSMPSAQTNNNLHGLNFYLPDGSKSNQLYLSNPALSSQHSHPTITLDLTSNPSNSSTSSPFVRFNSSYNNNNQLPARYPSSTLSFSSPESNPMHWNSFLNYATTQNQPYSNNRNNNNLSTLNFGRQNTMESIYQTYMQKNNNSSNISQHVGLQDSTISAATKAITADPTFQSALAAALSSLIGNTNQGNQNQSAGENLSQKMKWAEMFQVSSTSLPSSSSKVNGCGSSFLNKTAPVNNTQNGSLMLLSPSLPFSAPKSASASPGGDNSDNTN