Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67010.t1 | XP_003589128.1 | 96.7 | 546 | 18 | 0 | 1 | 546 | 1 | 546 | 2.10E-274 | 954.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67010.t1 | Q9S9X4 | 55.8 | 532 | 218 | 6 | 14 | 543 | 35 | 551 | 6.4e-155 | 548.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67010.t1 | Q2HTR2 | 96.7 | 546 | 18 | 0 | 1 | 546 | 1 | 546 | 1.5e-274 | 954.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene04918 | MS.gene67010 | 0.801026 | 1.09E-48 | -1.69E-46 |
MS.gene049283 | MS.gene67010 | 0.812264 | 4.63E-51 | -1.69E-46 |
MS.gene049368 | MS.gene67010 | 0.814209 | 1.73E-51 | -1.69E-46 |
MS.gene049411 | MS.gene67010 | 0.835302 | 1.82E-56 | -1.69E-46 |
MS.gene049680 | MS.gene67010 | 0.809511 | 1.83E-50 | -1.69E-46 |
MS.gene049983 | MS.gene67010 | 0.826648 | 2.42E-54 | -1.69E-46 |
MS.gene050085 | MS.gene67010 | 0.819024 | 1.44E-52 | -1.69E-46 |
MS.gene050359 | MS.gene67010 | 0.830903 | 2.26E-55 | -1.69E-46 |
MS.gene050384 | MS.gene67010 | 0.840234 | 9.83E-58 | -1.69E-46 |
MS.gene050386 | MS.gene67010 | 0.83868 | 2.49E-57 | -1.69E-46 |
MS.gene050414 | MS.gene67010 | 0.80971 | 1.65E-50 | -1.69E-46 |
MS.gene050646 | MS.gene67010 | 0.878641 | 2.38E-69 | -1.69E-46 |
MS.gene050654 | MS.gene67010 | 0.822811 | 1.94E-53 | -1.69E-46 |
MS.gene050689 | MS.gene67010 | 0.842182 | 3.02E-58 | -1.69E-46 |
MS.gene050752 | MS.gene67010 | 0.837437 | 5.20E-57 | -1.69E-46 |
MS.gene050838 | MS.gene67010 | 0.804607 | 1.99E-49 | -1.69E-46 |
MS.gene050931 | MS.gene67010 | 0.839912 | 1.19E-57 | -1.69E-46 |
MS.gene050941 | MS.gene67010 | 0.819288 | 1.26E-52 | -1.69E-46 |
MS.gene050945 | MS.gene67010 | 0.826901 | 2.10E-54 | -1.69E-46 |
MS.gene050955 | MS.gene67010 | 0.822229 | 2.65E-53 | -1.69E-46 |
MS.gene051003 | MS.gene67010 | 0.859299 | 4.55E-63 | -1.69E-46 |
MS.gene051043 | MS.gene67010 | 0.823301 | 1.49E-53 | -1.69E-46 |
MS.gene051234 | MS.gene67010 | 0.856578 | 2.93E-62 | -1.69E-46 |
MS.gene051343 | MS.gene67010 | 0.824797 | 6.64E-54 | -1.69E-46 |
MS.gene051381 | MS.gene67010 | 0.814665 | 1.37E-51 | -1.69E-46 |
MS.gene051642 | MS.gene67010 | 0.800583 | 1.35E-48 | -1.69E-46 |
MS.gene051856 | MS.gene67010 | 0.801595 | 8.36E-49 | -1.69E-46 |
MS.gene052072 | MS.gene67010 | 0.848387 | 6.33E-60 | -1.69E-46 |
MS.gene052307 | MS.gene67010 | 0.833118 | 6.41E-56 | -1.69E-46 |
MS.gene052342 | MS.gene67010 | 0.806469 | 8.10E-50 | -1.69E-46 |
MS.gene052516 | MS.gene67010 | 0.800718 | 1.26E-48 | -1.69E-46 |
MS.gene052609 | MS.gene67010 | 0.820076 | 8.30E-53 | -1.69E-46 |
MS.gene053058 | MS.gene67010 | 0.820001 | 8.64E-53 | -1.69E-46 |
MS.gene053143 | MS.gene67010 | 0.8154 | 9.43E-52 | -1.69E-46 |
MS.gene053575 | MS.gene67010 | 0.806785 | 6.95E-50 | -1.69E-46 |
MS.gene053879 | MS.gene67010 | 0.81628 | 6.00E-52 | -1.69E-46 |
MS.gene053931 | MS.gene67010 | 0.804301 | 2.31E-49 | -1.69E-46 |
MS.gene054004 | MS.gene67010 | 0.864879 | 8.85E-65 | -1.69E-46 |
MS.gene054005 | MS.gene67010 | 0.808613 | 2.84E-50 | -1.69E-46 |
MS.gene054178 | MS.gene67010 | 0.804608 | 1.99E-49 | -1.69E-46 |
MS.gene054403 | MS.gene67010 | 0.836383 | 9.67E-57 | -1.69E-46 |
MS.gene054709 | MS.gene67010 | 0.807658 | 4.54E-50 | -1.69E-46 |
MS.gene055513 | MS.gene67010 | 0.800897 | 1.16E-48 | -1.69E-46 |
MS.gene055886 | MS.gene67010 | 0.804328 | 2.28E-49 | -1.69E-46 |
MS.gene056097 | MS.gene67010 | 0.82256 | 2.22E-53 | -1.69E-46 |
MS.gene056181 | MS.gene67010 | 0.808532 | 2.96E-50 | -1.69E-46 |
MS.gene056578 | MS.gene67010 | 0.82641 | 2.75E-54 | -1.69E-46 |
MS.gene056699 | MS.gene67010 | 0.839669 | 1.38E-57 | -1.69E-46 |
MS.gene056881 | MS.gene67010 | 0.812323 | 4.49E-51 | -1.69E-46 |
MS.gene057102 | MS.gene67010 | 0.814622 | 1.40E-51 | -1.69E-46 |
MS.gene057131 | MS.gene67010 | 0.803982 | 2.69E-49 | -1.69E-46 |
MS.gene057174 | MS.gene67010 | 0.809929 | 1.48E-50 | -1.69E-46 |
MS.gene058261 | MS.gene67010 | 0.803907 | 2.79E-49 | -1.69E-46 |
MS.gene058781 | MS.gene67010 | 0.835038 | 2.12E-56 | -1.69E-46 |
MS.gene058783 | MS.gene67010 | 0.817377 | 3.40E-52 | -1.69E-46 |
MS.gene059007 | MS.gene67010 | 0.834192 | 3.45E-56 | -1.69E-46 |
MS.gene059146 | MS.gene67010 | 0.829885 | 4.01E-55 | -1.69E-46 |
MS.gene059290 | MS.gene67010 | 0.818801 | 1.62E-52 | -1.69E-46 |
MS.gene059778 | MS.gene67010 | 0.805774 | 1.13E-49 | -1.69E-46 |
MS.gene05985 | MS.gene67010 | -0.800638 | 1.31E-48 | -1.69E-46 |
MS.gene060244 | MS.gene67010 | 0.819813 | 9.53E-53 | -1.69E-46 |
MS.gene060259 | MS.gene67010 | 0.809158 | 2.17E-50 | -1.69E-46 |
MS.gene060933 | MS.gene67010 | 0.816481 | 5.41E-52 | -1.69E-46 |
MS.gene060935 | MS.gene67010 | 0.838317 | 3.09E-57 | -1.69E-46 |
MS.gene060937 | MS.gene67010 | 0.846181 | 2.55E-59 | -1.69E-46 |
MS.gene061100 | MS.gene67010 | 0.847439 | 1.16E-59 | -1.69E-46 |
MS.gene061160 | MS.gene67010 | 0.80069 | 1.28E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67010.t1 | MTR_1g018790 | 98.901 | 546 | 6 | 0 | 1 | 546 | 1 | 546 | 0.0 | 1093 |
MS.gene67010.t1 | MTR_4g094932 | 54.268 | 492 | 219 | 3 | 52 | 538 | 34 | 524 | 0.0 | 537 |
MS.gene67010.t1 | MTR_2g021030 | 27.489 | 462 | 261 | 13 | 59 | 449 | 5 | 463 | 2.25e-29 | 122 |
MS.gene67010.t1 | MTR_2g021030 | 26.171 | 363 | 224 | 12 | 98 | 453 | 245 | 570 | 7.71e-18 | 87.4 |
MS.gene67010.t1 | MTR_2g021030 | 27.945 | 433 | 239 | 12 | 59 | 421 | 5 | 434 | 4.89e-27 | 114 |
MS.gene67010.t1 | MTR_4g091290 | 24.375 | 480 | 252 | 18 | 57 | 443 | 19 | 480 | 3.04e-18 | 88.6 |
MS.gene67010.t1 | MTR_7g083610 | 24.187 | 492 | 260 | 16 | 61 | 446 | 1 | 485 | 1.38e-16 | 83.2 |
MS.gene67010.t1 | MTR_1g088950 | 21.756 | 501 | 256 | 17 | 64 | 446 | 14 | 496 | 1.07e-15 | 80.5 |
MS.gene67010.t1 | MTR_1g114610 | 24.471 | 425 | 230 | 13 | 66 | 455 | 23 | 391 | 2.04e-15 | 79.0 |
MS.gene67010.t1 | MTR_3g088895 | 30.806 | 211 | 139 | 5 | 257 | 462 | 77 | 285 | 5.35e-15 | 77.0 |
MS.gene67010.t1 | MTR_4g013255 | 29.600 | 250 | 168 | 6 | 134 | 381 | 342 | 585 | 1.09e-14 | 77.4 |
MS.gene67010.t1 | MTR_4g013255 | 26.538 | 260 | 182 | 6 | 187 | 443 | 318 | 571 | 6.15e-14 | 75.1 |
MS.gene67010.t1 | MTR_4g013255 | 25.629 | 437 | 241 | 13 | 103 | 472 | 99 | 518 | 2.05e-11 | 67.0 |
MS.gene67010.t1 | MTR_4g080020 | 24.307 | 469 | 248 | 15 | 54 | 470 | 3 | 416 | 2.00e-13 | 73.6 |
MS.gene67010.t1 | MTR_8g028140 | 24.234 | 359 | 207 | 14 | 45 | 341 | 4 | 359 | 2.31e-13 | 72.4 |
MS.gene67010.t1 | MTR_1g012520 | 24.398 | 332 | 223 | 11 | 136 | 450 | 200 | 520 | 6.86e-13 | 71.6 |
MS.gene67010.t1 | MTR_1g012520 | 30.370 | 135 | 66 | 3 | 320 | 453 | 177 | 284 | 1.12e-11 | 67.8 |
MS.gene67010.t1 | MTR_3g107280 | 37.143 | 140 | 82 | 4 | 320 | 453 | 143 | 282 | 7.54e-13 | 71.6 |
MS.gene67010.t1 | MTR_3g107280 | 22.374 | 514 | 258 | 15 | 61 | 434 | 68 | 580 | 9.75e-12 | 68.2 |
MS.gene67010.t1 | MTR_3g107280 | 30.052 | 193 | 98 | 7 | 294 | 453 | 200 | 388 | 3.75e-11 | 66.2 |
MS.gene67010.t1 | MTR_1g054625 | 27.668 | 253 | 159 | 9 | 120 | 361 | 77 | 316 | 8.49e-13 | 70.1 |
MS.gene67010.t1 | MTR_7g112570 | 26.149 | 348 | 215 | 13 | 138 | 453 | 197 | 534 | 2.08e-12 | 70.1 |
MS.gene67010.t1 | MTR_7g112570 | 23.022 | 417 | 231 | 14 | 79 | 453 | 63 | 431 | 6.54e-11 | 65.5 |
MS.gene67010.t1 | MTR_7g112570 | 26.149 | 348 | 215 | 13 | 138 | 453 | 197 | 534 | 2.86e-12 | 69.7 |
MS.gene67010.t1 | MTR_7g112570 | 23.022 | 417 | 231 | 14 | 79 | 453 | 63 | 431 | 8.92e-11 | 65.1 |
MS.gene67010.t1 | MTR_7g112570 | 26.149 | 348 | 215 | 13 | 138 | 453 | 197 | 534 | 3.57e-12 | 69.7 |
MS.gene67010.t1 | MTR_2g104760 | 24.163 | 418 | 256 | 13 | 71 | 453 | 9 | 400 | 1.42e-11 | 67.0 |
MS.gene67010.t1 | MTR_1g054625 | 27.511 | 229 | 127 | 6 | 138 | 361 | 25 | 219 | 1.48e-11 | 65.1 |
MS.gene67010.t1 | MTR_4g130630 | 32.653 | 147 | 92 | 4 | 296 | 438 | 73 | 216 | 6.48e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67010.t1 | AT1G47056 | 66.322 | 484 | 157 | 4 | 55 | 536 | 34 | 513 | 0.0 | 628 |
MS.gene67010.t1 | AT4G07400 | 61.036 | 521 | 186 | 6 | 13 | 531 | 34 | 539 | 0.0 | 605 |
MS.gene67010.t1 | AT5G67250 | 56.169 | 543 | 208 | 6 | 1 | 538 | 1 | 518 | 0.0 | 555 |
MS.gene67010.t1 | AT3G50080 | 56.790 | 486 | 200 | 6 | 56 | 538 | 36 | 514 | 0.0 | 531 |
MS.gene67010.t1 | AT4G15475 | 29.394 | 330 | 211 | 13 | 127 | 447 | 274 | 590 | 2.57e-23 | 104 |
MS.gene67010.t1 | AT4G15475 | 27.451 | 408 | 244 | 12 | 51 | 453 | 3 | 363 | 2.93e-21 | 98.2 |
MS.gene67010.t1 | AT2G25490 | 26.107 | 429 | 273 | 16 | 61 | 453 | 64 | 484 | 7.10e-17 | 84.3 |
MS.gene67010.t1 | AT2G25490 | 24.931 | 361 | 204 | 9 | 134 | 433 | 212 | 566 | 3.26e-14 | 75.9 |
MS.gene67010.t1 | AT5G27920 | 27.019 | 359 | 213 | 13 | 137 | 459 | 158 | 503 | 5.67e-16 | 81.6 |
MS.gene67010.t1 | AT5G27920 | 26.087 | 299 | 148 | 9 | 158 | 446 | 332 | 567 | 4.52e-11 | 65.9 |
MS.gene67010.t1 | AT1G12820 | 24.590 | 427 | 252 | 13 | 61 | 443 | 1 | 401 | 7.86e-15 | 77.8 |
MS.gene67010.t1 | AT3G26810 | 24.146 | 410 | 224 | 12 | 61 | 393 | 1 | 400 | 2.23e-14 | 76.3 |
MS.gene67010.t1 | AT5G23340 | 25.672 | 335 | 180 | 12 | 66 | 365 | 13 | 313 | 2.79e-14 | 75.5 |
MS.gene67010.t1 | AT5G01720 | 28.516 | 256 | 165 | 6 | 134 | 382 | 338 | 582 | 4.94e-14 | 75.5 |
MS.gene67010.t1 | AT5G01720 | 23.577 | 492 | 265 | 17 | 64 | 452 | 16 | 499 | 2.06e-12 | 70.5 |
MS.gene67010.t1 | AT3G07550 | 25.294 | 340 | 217 | 14 | 61 | 377 | 15 | 340 | 1.24e-13 | 73.2 |
MS.gene67010.t1 | AT1G80570 | 24.368 | 435 | 263 | 17 | 55 | 453 | 8 | 412 | 2.88e-13 | 72.8 |
MS.gene67010.t1 | AT1G80570 | 24.476 | 429 | 258 | 17 | 61 | 453 | 1 | 399 | 8.14e-13 | 71.2 |
MS.gene67010.t1 | AT1G80570 | 24.476 | 429 | 258 | 17 | 61 | 453 | 1 | 399 | 8.14e-13 | 71.2 |
MS.gene67010.t1 | AT5G25350 | 33.163 | 196 | 88 | 7 | 294 | 453 | 180 | 368 | 1.22e-12 | 70.9 |
MS.gene67010.t1 | AT3G07550 | 24.176 | 364 | 218 | 14 | 61 | 377 | 15 | 367 | 2.62e-12 | 69.3 |
MS.gene67010.t1 | AT3G07550 | 24.176 | 364 | 218 | 14 | 61 | 377 | 15 | 367 | 2.62e-12 | 69.3 |
MS.gene67010.t1 | AT1G21410 | 27.230 | 213 | 148 | 5 | 243 | 450 | 52 | 262 | 1.97e-11 | 66.2 |
MS.gene67010.t1 | AT1G21410 | 27.230 | 213 | 148 | 5 | 243 | 450 | 52 | 262 | 1.97e-11 | 66.2 |
MS.gene67010.t1 | AT4G03190 | 21.224 | 490 | 272 | 14 | 64 | 446 | 5 | 487 | 4.95e-11 | 65.9 |
Find 151 sgRNAs with CRISPR-Local
Find 156 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGCACCAATTCTTGCAAATT+AGG | 0.147721 | 1.2:+29859954 | None:intergenic |
GACCTTCACTTTCACCAAAT+TGG | 0.167556 | 1.2:+29859725 | None:intergenic |
TATTTCGAATTGTTCGAATT+TGG | 0.247249 | 1.2:-29860129 | MS.gene67010:CDS |
AGTTGTCCTGTTTCTGATCT+TGG | 0.260446 | 1.2:-29859774 | MS.gene67010:CDS |
GCCGCGGAGCCGGGCATTGC+AGG | 0.275184 | 1.2:+29859555 | None:intergenic |
CAGAAAGATGTAAGTTGTTA+AGG | 0.285853 | 1.2:-29860049 | MS.gene67010:CDS |
AGGCTTCAGATTAGTGATAT+TGG | 0.286479 | 1.2:-29860161 | MS.gene67010:CDS |
TTGCAAGAATTGGTGCTTAT+TGG | 0.291569 | 1.2:-29859948 | MS.gene67010:CDS |
TCGTGTGGATCTTGTACTTT+TGG | 0.297932 | 1.2:-29860485 | MS.gene67010:CDS |
CTTTATAATGGACAGTGTTT+TGG | 0.307331 | 1.2:-29860311 | MS.gene67010:CDS |
ATCGGTTGCCTGCACTTTCC+CGG | 0.307896 | 1.2:+29860993 | None:intergenic |
GCACCAATTCTTGCAAATTA+GGG | 0.310819 | 1.2:+29859955 | None:intergenic |
GGCGGTGGATCTGTTGGTTT+TGG | 0.323583 | 1.2:+29860967 | None:intergenic |
TTGCCCTAATTTGCAAGAAT+TGG | 0.326430 | 1.2:-29859958 | MS.gene67010:CDS |
GGCAAATGGGTGTCCCAATT+TGG | 0.327661 | 1.2:-29859739 | MS.gene67010:CDS |
ACCTTCACTTTCACCAAATT+GGG | 0.329278 | 1.2:+29859726 | None:intergenic |
GACACCCGAGTGTACTGATA+TGG | 0.331300 | 1.2:-29860087 | MS.gene67010:CDS |
ATCAGTGTTCACTCGTTTGC+CGG | 0.338793 | 1.2:-29860787 | MS.gene67010:CDS |
TGTTTGAAGGAACTTTATAA+TGG | 0.338946 | 1.2:-29860323 | MS.gene67010:CDS |
TATTTCGATGTTCCGGTGAT+TGG | 0.339573 | 1.2:-29860247 | MS.gene67010:CDS |
TGATCTTGGGATGGAAGCTT+TGG | 0.344571 | 1.2:-29859760 | MS.gene67010:CDS |
CTAAGAATTGTAAGGGTTTG+AGG | 0.347732 | 1.2:-29860514 | MS.gene67010:CDS |
AATTGTCGGTGAAGCGGCTT+AGG | 0.348422 | 1.2:-29860415 | MS.gene67010:CDS |
GTTGTCCTGTTTCTGATCTT+GGG | 0.350129 | 1.2:-29859773 | MS.gene67010:CDS |
CGCGACACGCGCGGAGCTTA+AGG | 0.354968 | 1.2:+29860567 | None:intergenic |
TTGCATTGCTGCAAAGTGTT+TGG | 0.356470 | 1.2:-29859820 | MS.gene67010:CDS |
CGCGAAGTTTGATCTTCTTC+CGG | 0.356911 | 1.2:-29860717 | MS.gene67010:CDS |
CTCAACCAATCCCCACCTTC+AGG | 0.369729 | 1.2:+29859681 | None:intergenic |
TTGAAGCTATTTCGATGTTC+CGG | 0.378035 | 1.2:-29860254 | MS.gene67010:CDS |
TAACCCTACGAGAGTGAGTT+TGG | 0.378471 | 1.2:-29859922 | MS.gene67010:CDS |
AGTTCATTCAAGCAAAGGTT+AGG | 0.388373 | 1.2:-29859489 | MS.gene67010:CDS |
GGGATTGGTTGAGGCACACT+AGG | 0.389313 | 1.2:-29859671 | MS.gene67010:CDS |
AAAGCCAATCTCTCTAGATT+CGG | 0.392075 | 1.2:+29859879 | None:intergenic |
GTTGAAGACGATTTGTTTGA+AGG | 0.397116 | 1.2:-29860336 | MS.gene67010:CDS |
GGGATGGAAGCTTTGGCAAA+TGG | 0.408413 | 1.2:-29859753 | MS.gene67010:CDS |
TTAAGGAAGCTACATATTGA+TGG | 0.408793 | 1.2:-29860032 | MS.gene67010:CDS |
CGATGTAGATGCCGCGGAGC+CGG | 0.410875 | 1.2:+29859545 | None:intergenic |
ATTTCGATGTTCCGGTGATT+GGG | 0.419025 | 1.2:-29860246 | MS.gene67010:CDS |
GGTTTCTGTAGCTGTGAATC+TGG | 0.425023 | 1.2:-29859649 | MS.gene67010:CDS |
ACTTTCCCGGCGGTTGGTTC+CGG | 0.430973 | 1.2:+29861006 | None:intergenic |
CGCTGCGCTCGAGGAATTGT+CGG | 0.432114 | 1.2:-29860429 | MS.gene67010:CDS |
CCGCGCGTGTCGCGAACTTA+CGG | 0.432226 | 1.2:-29860558 | MS.gene67010:CDS |
GATGTAGATGCCGCGGAGCC+GGG | 0.436914 | 1.2:+29859546 | None:intergenic |
TTACACCTGAAGGTGGGGAT+TGG | 0.440333 | 1.2:-29859686 | MS.gene67010:CDS |
GCCTGCACTTTCCCGGCGGT+TGG | 0.443897 | 1.2:+29861000 | None:intergenic |
GTTCACTCGTTTGCCGGCGG+TGG | 0.448947 | 1.2:-29860781 | MS.gene67010:CDS |
GCAAATCGGATTGGCGATGA+AGG | 0.452211 | 1.2:-29860002 | MS.gene67010:CDS |
TGGCTAGCACTTTGAGAAGA+TGG | 0.454655 | 1.2:-29859443 | MS.gene67010:CDS |
TTGCCCGAATCTAGAGAGAT+TGG | 0.454730 | 1.2:-29859883 | MS.gene67010:CDS |
TTAAACAGAGAAGGAATTAC+CGG | 0.456733 | 1.2:+29860698 | None:intergenic |
CGGTGACGATGTTGCAGATC+CGG | 0.458209 | 1.2:-29860915 | MS.gene67010:CDS |
TCGTTACCGTCACCGTCAAC+CGG | 0.458796 | 1.2:+29860896 | None:intergenic |
CGGCGGTGGCTTCACGTTGA+AGG | 0.459312 | 1.2:-29860767 | MS.gene67010:CDS |
TGTCGCGAACTTACGGATGC+TGG | 0.459477 | 1.2:-29860551 | MS.gene67010:CDS |
AGGTAGATCTGATATATAAT+CGG | 0.459744 | 1.2:+29860859 | None:intergenic |
CGAACTTACGGATGCTGGAA+TGG | 0.461081 | 1.2:-29860546 | MS.gene67010:CDS |
CAAAGGTTAGGGCTACTGTC+CGG | 0.463095 | 1.2:-29859477 | MS.gene67010:CDS |
AGCTTAAGGCGCGTGAGATT+AGG | 0.464192 | 1.2:+29860581 | None:intergenic |
TCCTGTTTCTGATCTTGGGA+TGG | 0.465939 | 1.2:-29859769 | MS.gene67010:CDS |
GGATGGAAGCTTTGGCAAAT+GGG | 0.471037 | 1.2:-29859752 | MS.gene67010:CDS |
TCCATCCCAAGATCAGAAAC+AGG | 0.475671 | 1.2:+29859768 | None:intergenic |
AGTGAAGGTCAAGAAGTGTA+AGG | 0.477496 | 1.2:-29859712 | MS.gene67010:CDS |
ATTGAATTTCCTGCAATGCC+CGG | 0.481428 | 1.2:-29859564 | MS.gene67010:CDS |
AAGCCAATCTCTCTAGATTC+GGG | 0.481744 | 1.2:+29859880 | None:intergenic |
TTGATGGATGGAAGGCAAAT+CGG | 0.482279 | 1.2:-29860016 | MS.gene67010:CDS |
GATGGTGGAGCACAAGAGAA+TGG | 0.489500 | 1.2:-29859588 | MS.gene67010:CDS |
CGGTGACCGTGGAAGCTGCT+TGG | 0.490935 | 1.2:+29861026 | None:intergenic |
GCGGCCACACCCGGTCCAAT+CGG | 0.492352 | 1.2:+29860365 | None:intergenic |
GGTGGCTGAGCCGATTGGAC+CGG | 0.494009 | 1.2:-29860375 | MS.gene67010:CDS |
AAAGGTTAGGGCTACTGTCC+GGG | 0.502510 | 1.2:-29859476 | MS.gene67010:CDS |
CAAGCAGCTTCCACGGTCAC+CGG | 0.502543 | 1.2:-29861025 | MS.gene67010:CDS |
ACCAACCGCCGGGAAAGTGC+AGG | 0.508208 | 1.2:-29861001 | MS.gene67010:CDS |
GATCGAGTTCATTCAAGCAA+AGG | 0.510836 | 1.2:-29859494 | MS.gene67010:CDS |
GCAGCAATGCAAGATATCTC+AGG | 0.514016 | 1.2:+29859831 | None:intergenic |
ATTGTCGGTGAAGCGGCTTA+GGG | 0.516744 | 1.2:-29860414 | MS.gene67010:CDS |
CGGCTCCGCGGCATCTACAT+CGG | 0.517144 | 1.2:-29859544 | MS.gene67010:CDS |
TGAAAATTGCGCTGCGCTCG+AGG | 0.520318 | 1.2:-29860438 | MS.gene67010:CDS |
AGCACTTTGAGAAGATGGTC+AGG | 0.520658 | 1.2:-29859438 | MS.gene67010:CDS |
CTCTTGTCTCTAACCATGAC+GGG | 0.521217 | 1.2:+29859401 | None:intergenic |
GAGAGTGAGTTTGGAAATGT+TGG | 0.521536 | 1.2:-29859913 | MS.gene67010:CDS |
CGGTCACCGGAACCAACCGC+CGG | 0.521564 | 1.2:-29861012 | MS.gene67010:CDS |
AACCAACAGATCCACCGCCT+TGG | 0.526292 | 1.2:-29860963 | MS.gene67010:CDS |
ATGGTGGAGCACAAGAGAAT+GGG | 0.527565 | 1.2:-29859587 | MS.gene67010:CDS |
CTGAAGGTGGGGATTGGTTG+AGG | 0.528050 | 1.2:-29859680 | MS.gene67010:CDS |
ACAATCGCTAAACATTCATC+AGG | 0.529545 | 1.2:+29860839 | None:intergenic |
ACTGCGGTGGCTGAGCCGAT+TGG | 0.531430 | 1.2:-29860380 | MS.gene67010:CDS |
AACCAAGGCGGTGGATCTGT+TGG | 0.533705 | 1.2:+29860961 | None:intergenic |
TCCTGCAATGCCCGGCTCCG+CGG | 0.534211 | 1.2:-29859556 | MS.gene67010:CDS |
GGTGACGGTAACGACGGAAT+CGG | 0.538000 | 1.2:-29860887 | MS.gene67010:CDS |
GATGGGCCAAGCAGCTTCCA+CGG | 0.538513 | 1.2:-29861032 | MS.gene67010:CDS |
GGATGGAAGGCAAATCGGAT+TGG | 0.542728 | 1.2:-29860011 | MS.gene67010:CDS |
GGATTGGTTGAGGCACACTA+GGG | 0.546523 | 1.2:-29859670 | MS.gene67010:CDS |
TACGCTTATGGCTGAAAGAG+TGG | 0.548501 | 1.2:-29860213 | MS.gene67010:CDS |
ACACCCGAGTGTACTGATAT+GGG | 0.549063 | 1.2:-29860086 | MS.gene67010:CDS |
AGTTGTTGAATCCCTCTGAT+CGG | 0.551499 | 1.2:-29860811 | MS.gene67010:CDS |
GTTCATTCAAGCAAAGGTTA+GGG | 0.551510 | 1.2:-29859488 | MS.gene67010:CDS |
GTGGCTGAGCCGATTGGACC+GGG | 0.559010 | 1.2:-29860374 | MS.gene67010:CDS |
CATCGGAGAAACCAAGGCGG+TGG | 0.561191 | 1.2:+29860952 | None:intergenic |
AACGACGCAGCGGCCACACC+CGG | 0.561295 | 1.2:+29860356 | None:intergenic |
TCAAATCGATTAAACAGAGA+AGG | 0.563215 | 1.2:+29860689 | None:intergenic |
TTTCCAAACTCACTCTCGTA+GGG | 0.564500 | 1.2:+29859919 | None:intergenic |
AAGTCCCATATCAGTACACT+CGG | 0.573118 | 1.2:+29860082 | None:intergenic |
GGTCACCGGAACCAACCGCC+GGG | 0.573207 | 1.2:-29861011 | MS.gene67010:CDS |
CTTCAACGTGAAGCCACCGC+CGG | 0.574094 | 1.2:+29860768 | None:intergenic |
CCGTCGTCGGTGGAGATCAT+CGG | 0.576061 | 1.2:+29860935 | None:intergenic |
ATTTCCAAACTCACTCTCGT+AGG | 0.578841 | 1.2:+29859918 | None:intergenic |
CCGTAAGTTCGCGACACGCG+CGG | 0.579903 | 1.2:+29860558 | None:intergenic |
TGAGCCGATTGGACCGGGTG+TGG | 0.583172 | 1.2:-29860369 | MS.gene67010:CDS |
AGGGTGTTACACCTGAAGGT+GGG | 0.590987 | 1.2:-29859692 | MS.gene67010:CDS |
TGCAACATCGTCACCGTCGT+CGG | 0.591831 | 1.2:+29860922 | None:intergenic |
GCAGATCCGGTTGACGGTGA+CGG | 0.594512 | 1.2:-29860902 | MS.gene67010:CDS |
TCGAGGAATTGTCGGTGAAG+CGG | 0.594693 | 1.2:-29860421 | MS.gene67010:CDS |
GGAAGCTACATATTGATGGA+TGG | 0.598307 | 1.2:-29860028 | MS.gene67010:CDS |
GCTACATATTGATGGATGGA+AGG | 0.601245 | 1.2:-29860024 | MS.gene67010:CDS |
GCGGTTGGTTCCGGTGACCG+TGG | 0.602758 | 1.2:+29861015 | None:intergenic |
TGAACACTGATTCCGATCAG+AGG | 0.604053 | 1.2:+29860799 | None:intergenic |
TAGGGGAATTGCTGAGACTG+CGG | 0.604704 | 1.2:-29860396 | MS.gene67010:CDS |
GTGAAGGTCAAGAAGTGTAA+GGG | 0.606922 | 1.2:-29859711 | MS.gene67010:CDS |
GCTCTTGTCTCTAACCATGA+CGG | 0.610454 | 1.2:+29859400 | None:intergenic |
GAACACTGATTCCGATCAGA+GGG | 0.612028 | 1.2:+29860800 | None:intergenic |
TGTAAGGGTGTTACACCTGA+AGG | 0.612165 | 1.2:-29859696 | MS.gene67010:CDS |
GATGCTAGTGCTAGTGATGG+TGG | 0.613432 | 1.2:-29859603 | MS.gene67010:CDS |
TGTAGCTGTGAATCTGGACG+CGG | 0.617383 | 1.2:-29859643 | MS.gene67010:CDS |
GGGTGTTACACCTGAAGGTG+GGG | 0.621074 | 1.2:-29859691 | MS.gene67010:CDS |
TTGAAGGACAGAGTCGTCAA+CGG | 0.623455 | 1.2:-29860751 | MS.gene67010:CDS |
TTGTCGGTGAAGCGGCTTAG+GGG | 0.627341 | 1.2:-29860413 | MS.gene67010:CDS |
CAAATCGGATTGGCGATGAA+GGG | 0.628264 | 1.2:-29860001 | MS.gene67010:CDS |
TGGCGATGAAGGGTTAATTG+CGG | 0.631783 | 1.2:-29859991 | MS.gene67010:CDS |
TCCCAATTTGGTGAAAGTGA+AGG | 0.632374 | 1.2:-29859727 | MS.gene67010:CDS |
TTGTGTGCAAGTGATACTGT+TGG | 0.633448 | 1.2:-29859858 | MS.gene67010:CDS |
AGTGTTCACTCGTTTGCCGG+CGG | 0.634069 | 1.2:-29860784 | MS.gene67010:CDS |
AAGGGTGTTACACCTGAAGG+TGG | 0.641667 | 1.2:-29859693 | MS.gene67010:CDS |
GGAGATCATCGGAGAAACCA+AGG | 0.642236 | 1.2:+29860946 | None:intergenic |
AGTGGCGAGTATGATTGTTG+AGG | 0.646663 | 1.2:-29860195 | MS.gene67010:CDS |
GATGTTGCAGATCCGGTTGA+CGG | 0.647651 | 1.2:-29860908 | MS.gene67010:CDS |
AACATCGTCACCGTCGTCGG+TGG | 0.649647 | 1.2:+29860925 | None:intergenic |
GGGAATTGCTGAGACTGCGG+TGG | 0.651918 | 1.2:-29860393 | MS.gene67010:CDS |
ATTTGCCGATGTAGATGCCG+CGG | 0.660814 | 1.2:+29859539 | None:intergenic |
GGTAGCACTAGTGCCCGTCA+TGG | 0.661122 | 1.2:-29859414 | None:intergenic |
CCGATGATCTCCACCGACGA+CGG | 0.668098 | 1.2:-29860935 | MS.gene67010:CDS |
CAAGATGCTAGTGCTAGTGA+TGG | 0.682263 | 1.2:-29859606 | MS.gene67010:CDS |
GGTTTGAGGAAATTATCGTG+TGG | 0.686243 | 1.2:-29860500 | MS.gene67010:CDS |
ACTGTCCGGGAGGAAAATTG+TGG | 0.692257 | 1.2:-29859463 | MS.gene67010:CDS |
ACTTTGAGAAGATGGTCAGG+TGG | 0.698161 | 1.2:-29859435 | MS.gene67010:CDS |
GTTGACGGTGACGGTAACGA+CGG | 0.702577 | 1.2:-29860893 | MS.gene67010:CDS |
AATCGTCTTCAACGACGCAG+CGG | 0.706961 | 1.2:+29860346 | None:intergenic |
GGTTGCCTGCACTTTCCCGG+CGG | 0.709663 | 1.2:+29860996 | None:intergenic |
GGTTAGGGCTACTGTCCGGG+AGG | 0.714520 | 1.2:-29859473 | MS.gene67010:CDS |
TGGATCTAAAGGTATGAACG+CGG | 0.726086 | 1.2:-29860465 | MS.gene67010:CDS |
AGTCCCATATCAGTACACTC+GGG | 0.741022 | 1.2:+29860083 | None:intergenic |
GATCATCGGAGAAACCAAGG+CGG | 0.832722 | 1.2:+29860949 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | AGGTAGATCTGATATATAAT+CGG | + | chr1.2:29859590-29859609 | None:intergenic | 25.0% |
! | TATTTCGAATTGTTCGAATT+TGG | - | chr1.2:29860317-29860336 | MS.gene67010:CDS | 25.0% |
! | TGTTTGAAGGAACTTTATAA+TGG | - | chr1.2:29860123-29860142 | MS.gene67010:CDS | 25.0% |
CAGAAAGATGTAAGTTGTTA+AGG | - | chr1.2:29860397-29860416 | MS.gene67010:CDS | 30.0% | |
TCAAATCGATTAAACAGAGA+AGG | + | chr1.2:29859760-29859779 | None:intergenic | 30.0% | |
TTAAACAGAGAAGGAATTAC+CGG | + | chr1.2:29859751-29859770 | None:intergenic | 30.0% | |
TTAAGGAAGCTACATATTGA+TGG | - | chr1.2:29860414-29860433 | MS.gene67010:CDS | 30.0% | |
! | AGCTTTTGCTAAGAATTGTA+AGG | - | chr1.2:29859924-29859943 | MS.gene67010:CDS | 30.0% |
! | GCTTTTGCTAAGAATTGTAA+GGG | - | chr1.2:29859925-29859944 | MS.gene67010:CDS | 30.0% |
! | TCTTGTACTTTTGGATCTAA+AGG | - | chr1.2:29859970-29859989 | MS.gene67010:CDS | 30.0% |
!!! | CTTTATAATGGACAGTGTTT+TGG | - | chr1.2:29860135-29860154 | MS.gene67010:CDS | 30.0% |
!!! | TGTTTTGGTTCGTTGATTTT+AGG | - | chr1.2:29860150-29860169 | MS.gene67010:CDS | 30.0% |
AAAGCCAATCTCTCTAGATT+CGG | + | chr1.2:29860570-29860589 | None:intergenic | 35.0% | |
ACAATCGCTAAACATTCATC+AGG | + | chr1.2:29859610-29859629 | None:intergenic | 35.0% | |
ACCTTCACTTTCACCAAATT+GGG | + | chr1.2:29860723-29860742 | None:intergenic | 35.0% | |
AGCACCAATTCTTGCAAATT+AGG | + | chr1.2:29860495-29860514 | None:intergenic | 35.0% | |
AGGCTTCAGATTAGTGATAT+TGG | - | chr1.2:29860285-29860304 | MS.gene67010:CDS | 35.0% | |
AGTTCATTCAAGCAAAGGTT+AGG | - | chr1.2:29860957-29860976 | MS.gene67010:CDS | 35.0% | |
CTAAGAATTGTAAGGGTTTG+AGG | - | chr1.2:29859932-29859951 | MS.gene67010:CDS | 35.0% | |
GCACCAATTCTTGCAAATTA+GGG | + | chr1.2:29860494-29860513 | None:intergenic | 35.0% | |
GTTCATTCAAGCAAAGGTTA+GGG | - | chr1.2:29860958-29860977 | MS.gene67010:CDS | 35.0% | |
! | GTTGAAGACGATTTGTTTGA+AGG | - | chr1.2:29860110-29860129 | MS.gene67010:CDS | 35.0% |
! | TTGAAGCTATTTCGATGTTC+CGG | - | chr1.2:29860192-29860211 | MS.gene67010:CDS | 35.0% |
! | TTGCAAGAATTGGTGCTTAT+TGG | - | chr1.2:29860498-29860517 | MS.gene67010:CDS | 35.0% |
! | TTGCCCTAATTTGCAAGAAT+TGG | - | chr1.2:29860488-29860507 | MS.gene67010:CDS | 35.0% |
! | TTGTTGAGGTTCATTTTGAG+AGG | - | chr1.2:29860265-29860284 | MS.gene67010:CDS | 35.0% |
!!! | ATCTGTTGGTTTTGGTAGAT+CGG | + | chr1.2:29859474-29859493 | None:intergenic | 35.0% |
AAGCCAATCTCTCTAGATTC+GGG | + | chr1.2:29860569-29860588 | None:intergenic | 40.0% | |
AAGTCCCATATCAGTACACT+CGG | + | chr1.2:29860367-29860386 | None:intergenic | 40.0% | |
AGTTGTTGAATCCCTCTGAT+CGG | - | chr1.2:29859635-29859654 | MS.gene67010:CDS | 40.0% | |
ATTGAATTTCCTGCAATGCC+CGG | - | chr1.2:29860882-29860901 | MS.gene67010:CDS | 40.0% | |
ATTTCCAAACTCACTCTCGT+AGG | + | chr1.2:29860531-29860550 | None:intergenic | 40.0% | |
ATTTCGATGTTCCGGTGATT+GGG | - | chr1.2:29860200-29860219 | MS.gene67010:CDS | 40.0% | |
GACCTTCACTTTCACCAAAT+TGG | + | chr1.2:29860724-29860743 | None:intergenic | 40.0% | |
GAGAGTGAGTTTGGAAATGT+TGG | - | chr1.2:29860533-29860552 | MS.gene67010:CDS | 40.0% | |
GATCGAGTTCATTCAAGCAA+AGG | - | chr1.2:29860952-29860971 | MS.gene67010:CDS | 40.0% | |
GGAAGCTACATATTGATGGA+TGG | - | chr1.2:29860418-29860437 | MS.gene67010:CDS | 40.0% | |
GGTTTGAGGAAATTATCGTG+TGG | - | chr1.2:29859946-29859965 | MS.gene67010:CDS | 40.0% | |
TATTTCGATGTTCCGGTGAT+TGG | - | chr1.2:29860199-29860218 | MS.gene67010:CDS | 40.0% | |
TTGTGTGCAAGTGATACTGT+TGG | - | chr1.2:29860588-29860607 | MS.gene67010:CDS | 40.0% | |
TTTCCAAACTCACTCTCGTA+GGG | + | chr1.2:29860530-29860549 | None:intergenic | 40.0% | |
! | AAAAAGCGTATCCCAATCAC+CGG | + | chr1.2:29860214-29860233 | None:intergenic | 40.0% |
! | AGTGAAGGTCAAGAAGTGTA+AGG | - | chr1.2:29860734-29860753 | MS.gene67010:CDS | 40.0% |
! | GCTACATATTGATGGATGGA+AGG | - | chr1.2:29860422-29860441 | MS.gene67010:CDS | 40.0% |
! | GTGAAGGTCAAGAAGTGTAA+GGG | - | chr1.2:29860735-29860754 | MS.gene67010:CDS | 40.0% |
! | TCCCAATTTGGTGAAAGTGA+AGG | - | chr1.2:29860719-29860738 | MS.gene67010:CDS | 40.0% |
! | TCGTGTGGATCTTGTACTTT+TGG | - | chr1.2:29859961-29859980 | MS.gene67010:CDS | 40.0% |
! | TGGATCTAAAGGTATGAACG+CGG | - | chr1.2:29859981-29860000 | MS.gene67010:CDS | 40.0% |
! | TTGATGGATGGAAGGCAAAT+CGG | - | chr1.2:29860430-29860449 | MS.gene67010:CDS | 40.0% |
! | TTGCATTGCTGCAAAGTGTT+TGG | - | chr1.2:29860626-29860645 | MS.gene67010:CDS | 40.0% |
!! | AGTTGTCCTGTTTCTGATCT+TGG | - | chr1.2:29860672-29860691 | MS.gene67010:CDS | 40.0% |
!! | GGATACGCTTTTTACGCTTA+TGG | - | chr1.2:29860221-29860240 | MS.gene67010:CDS | 40.0% |
!! | GTTGTCCTGTTTCTGATCTT+GGG | - | chr1.2:29860673-29860692 | MS.gene67010:CDS | 40.0% |
AGTCCCATATCAGTACACTC+GGG | + | chr1.2:29860366-29860385 | None:intergenic | 45.0% | |
AGTGGCGAGTATGATTGTTG+AGG | - | chr1.2:29860251-29860270 | MS.gene67010:CDS | 45.0% | |
ATCAGTGTTCACTCGTTTGC+CGG | - | chr1.2:29859659-29859678 | MS.gene67010:CDS | 45.0% | |
CAAGATGCTAGTGCTAGTGA+TGG | - | chr1.2:29860840-29860859 | MS.gene67010:CDS | 45.0% | |
CGCGAAGTTTGATCTTCTTC+CGG | - | chr1.2:29859729-29859748 | MS.gene67010:CDS | 45.0% | |
GCAGCAATGCAAGATATCTC+AGG | + | chr1.2:29860618-29860637 | None:intergenic | 45.0% | |
GGTTTCTGTAGCTGTGAATC+TGG | - | chr1.2:29860797-29860816 | MS.gene67010:CDS | 45.0% | |
TAACCCTACGAGAGTGAGTT+TGG | - | chr1.2:29860524-29860543 | MS.gene67010:CDS | 45.0% | |
TACGCTTATGGCTGAAAGAG+TGG | - | chr1.2:29860233-29860252 | MS.gene67010:CDS | 45.0% | |
TCCATCCCAAGATCAGAAAC+AGG | + | chr1.2:29860681-29860700 | None:intergenic | 45.0% | |
TGATCTTGGGATGGAAGCTT+TGG | - | chr1.2:29860686-29860705 | MS.gene67010:CDS | 45.0% | |
TGGCGATGAAGGGTTAATTG+CGG | - | chr1.2:29860455-29860474 | MS.gene67010:CDS | 45.0% | |
TTGAAGGACAGAGTCGTCAA+CGG | - | chr1.2:29859695-29859714 | MS.gene67010:CDS | 45.0% | |
TTGCCCGAATCTAGAGAGAT+TGG | - | chr1.2:29860563-29860582 | MS.gene67010:CDS | 45.0% | |
! | ACACCCGAGTGTACTGATAT+GGG | - | chr1.2:29860360-29860379 | MS.gene67010:CDS | 45.0% |
! | ACTTTGAGAAGATGGTCAGG+TGG | - | chr1.2:29861011-29861030 | MS.gene67010:CDS | 45.0% |
! | AGCACTTTGAGAAGATGGTC+AGG | - | chr1.2:29861008-29861027 | MS.gene67010:CDS | 45.0% |
! | ATGGTGGAGCACAAGAGAAT+GGG | - | chr1.2:29860859-29860878 | MS.gene67010:CDS | 45.0% |
! | GGATGGAAGCTTTGGCAAAT+GGG | - | chr1.2:29860694-29860713 | MS.gene67010:CDS | 45.0% |
! | TGGCTAGCACTTTGAGAAGA+TGG | - | chr1.2:29861003-29861022 | MS.gene67010:CDS | 45.0% |
!! | CAAATCGGATTGGCGATGAA+GGG | - | chr1.2:29860445-29860464 | MS.gene67010:CDS | 45.0% |
!! | GAACACTGATTCCGATCAGA+GGG | + | chr1.2:29859649-29859668 | None:intergenic | 45.0% |
!! | TCCTGTTTCTGATCTTGGGA+TGG | - | chr1.2:29860677-29860696 | MS.gene67010:CDS | 45.0% |
!! | TGAACACTGATTCCGATCAG+AGG | + | chr1.2:29859650-29859669 | None:intergenic | 45.0% |
!! | TGTAAGGGTGTTACACCTGA+AGG | - | chr1.2:29860750-29860769 | MS.gene67010:CDS | 45.0% |
AAAGGTTAGGGCTACTGTCC+GGG | - | chr1.2:29860970-29860989 | MS.gene67010:CDS | 50.0% | |
AATCGTCTTCAACGACGCAG+CGG | + | chr1.2:29860103-29860122 | None:intergenic | 50.0% | |
AATTGTCGGTGAAGCGGCTT+AGG | - | chr1.2:29860031-29860050 | MS.gene67010:CDS | 50.0% | |
ACTGTCCGGGAGGAAAATTG+TGG | - | chr1.2:29860983-29861002 | MS.gene67010:CDS | 50.0% | |
AGCTTAAGGCGCGTGAGATT+AGG | + | chr1.2:29859868-29859887 | None:intergenic | 50.0% | |
ATTGTCGGTGAAGCGGCTTA+GGG | - | chr1.2:29860032-29860051 | MS.gene67010:CDS | 50.0% | |
ATTTGCCGATGTAGATGCCG+CGG | + | chr1.2:29860910-29860929 | None:intergenic | 50.0% | |
CAAAGGTTAGGGCTACTGTC+CGG | - | chr1.2:29860969-29860988 | MS.gene67010:CDS | 50.0% | |
CGAACTTACGGATGCTGGAA+TGG | - | chr1.2:29859900-29859919 | MS.gene67010:CDS | 50.0% | |
GATCATCGGAGAAACCAAGG+CGG | + | chr1.2:29859500-29859519 | None:intergenic | 50.0% | |
GATGCTAGTGCTAGTGATGG+TGG | - | chr1.2:29860843-29860862 | MS.gene67010:CDS | 50.0% | |
GATGTTGCAGATCCGGTTGA+CGG | - | chr1.2:29859538-29859557 | MS.gene67010:CDS | 50.0% | |
GGAGATCATCGGAGAAACCA+AGG | + | chr1.2:29859503-29859522 | None:intergenic | 50.0% | |
GGATGGAAGGCAAATCGGAT+TGG | - | chr1.2:29860435-29860454 | MS.gene67010:CDS | 50.0% | |
GGCAAATGGGTGTCCCAATT+TGG | - | chr1.2:29860707-29860726 | MS.gene67010:CDS | 50.0% | |
TAGGGGAATTGCTGAGACTG+CGG | - | chr1.2:29860050-29860069 | MS.gene67010:CDS | 50.0% | |
TCGAGGAATTGTCGGTGAAG+CGG | - | chr1.2:29860025-29860044 | MS.gene67010:CDS | 50.0% | |
TGTAGCTGTGAATCTGGACG+CGG | - | chr1.2:29860803-29860822 | MS.gene67010:CDS | 50.0% | |
TTACACCTGAAGGTGGGGAT+TGG | - | chr1.2:29860760-29860779 | MS.gene67010:CDS | 50.0% | |
! | AGGGTGTTACACCTGAAGGT+GGG | - | chr1.2:29860754-29860773 | MS.gene67010:CDS | 50.0% |
! | GACACCCGAGTGTACTGATA+TGG | - | chr1.2:29860359-29860378 | MS.gene67010:CDS | 50.0% |
! | GCTAGCCACAATTTTCCTCC+CGG | + | chr1.2:29860991-29861010 | None:intergenic | 50.0% |
! | GGGATGGAAGCTTTGGCAAA+TGG | - | chr1.2:29860693-29860712 | MS.gene67010:CDS | 50.0% |
!! | AAGGGTGTTACACCTGAAGG+TGG | - | chr1.2:29860753-29860772 | MS.gene67010:CDS | 50.0% |
!! | GATGGTGGAGCACAAGAGAA+TGG | - | chr1.2:29860858-29860877 | MS.gene67010:CDS | 50.0% |
!! | GCAAATCGGATTGGCGATGA+AGG | - | chr1.2:29860444-29860463 | MS.gene67010:CDS | 50.0% |
!! | GGATTGGTTGAGGCACACTA+GGG | - | chr1.2:29860776-29860795 | MS.gene67010:CDS | 50.0% |
AACCAACAGATCCACCGCCT+TGG | - | chr1.2:29859483-29859502 | MS.gene67010:CDS | 55.0% | |
AACCAAGGCGGTGGATCTGT+TGG | + | chr1.2:29859488-29859507 | None:intergenic | 55.0% | |
AGTGTTCACTCGTTTGCCGG+CGG | - | chr1.2:29859662-29859681 | MS.gene67010:CDS | 55.0% | |
ATCGGTTGCCTGCACTTTCC+CGG | + | chr1.2:29859456-29859475 | None:intergenic | 55.0% | |
CGGTGACGATGTTGCAGATC+CGG | - | chr1.2:29859531-29859550 | MS.gene67010:CDS | 55.0% | |
CTCAACCAATCCCCACCTTC+AGG | + | chr1.2:29860768-29860787 | None:intergenic | 55.0% | |
TCGTTACCGTCACCGTCAAC+CGG | + | chr1.2:29859553-29859572 | None:intergenic | 55.0% | |
TGAAAATTGCGCTGCGCTCG+AGG | - | chr1.2:29860008-29860027 | MS.gene67010:CDS | 55.0% | |
TGCAACATCGTCACCGTCGT+CGG | + | chr1.2:29859527-29859546 | None:intergenic | 55.0% | |
TGTCGCGAACTTACGGATGC+TGG | - | chr1.2:29859895-29859914 | MS.gene67010:CDS | 55.0% | |
TTGTCGGTGAAGCGGCTTAG+GGG | - | chr1.2:29860033-29860052 | MS.gene67010:CDS | 55.0% | |
! | GGGTGTTACACCTGAAGGTG+GGG | - | chr1.2:29860755-29860774 | MS.gene67010:CDS | 55.0% |
! | GGTGACGGTAACGACGGAAT+CGG | - | chr1.2:29859559-29859578 | MS.gene67010:CDS | 55.0% |
! | GTTGACGGTGACGGTAACGA+CGG | - | chr1.2:29859553-29859572 | MS.gene67010:CDS | 55.0% |
!! | CTGAAGGTGGGGATTGGTTG+AGG | - | chr1.2:29860766-29860785 | MS.gene67010:CDS | 55.0% |
!! | GGGATTGGTTGAGGCACACT+AGG | - | chr1.2:29860775-29860794 | MS.gene67010:CDS | 55.0% |
!!! | GGCGGTGGATCTGTTGGTTT+TGG | + | chr1.2:29859482-29859501 | None:intergenic | 55.0% |
AACATCGTCACCGTCGTCGG+TGG | + | chr1.2:29859524-29859543 | None:intergenic | 60.0% | |
CAAGCAGCTTCCACGGTCAC+CGG | - | chr1.2:29859421-29859440 | MS.gene67010:CDS | 60.0% | |
CATCGGAGAAACCAAGGCGG+TGG | + | chr1.2:29859497-29859516 | None:intergenic | 60.0% | |
CCGATGATCTCCACCGACGA+CGG | - | chr1.2:29859511-29859530 | MS.gene67010:CDS | 60.0% | |
CCGTCGTCGGTGGAGATCAT+CGG | + | chr1.2:29859514-29859533 | None:intergenic | 60.0% | |
CGCTGCGCTCGAGGAATTGT+CGG | - | chr1.2:29860017-29860036 | MS.gene67010:CDS | 60.0% | |
CTTCAACGTGAAGCCACCGC+CGG | + | chr1.2:29859681-29859700 | None:intergenic | 60.0% | |
GCAGATCCGGTTGACGGTGA+CGG | - | chr1.2:29859544-29859563 | MS.gene67010:CDS | 60.0% | |
GGGAATTGCTGAGACTGCGG+TGG | - | chr1.2:29860053-29860072 | MS.gene67010:CDS | 60.0% | |
! | ACTTTCCCGGCGGTTGGTTC+CGG | + | chr1.2:29859443-29859462 | None:intergenic | 60.0% |
ACTGCGGTGGCTGAGCCGAT+TGG | - | chr1.2:29860066-29860085 | MS.gene67010:CDS | 65.0% | |
CCGCGCGTGTCGCGAACTTA+CGG | - | chr1.2:29859888-29859907 | MS.gene67010:CDS | 65.0% | |
CCGTAAGTTCGCGACACGCG+CGG | + | chr1.2:29859891-29859910 | None:intergenic | 65.0% | |
CGATGTAGATGCCGCGGAGC+CGG | + | chr1.2:29860904-29860923 | None:intergenic | 65.0% | |
CGGCGGTGGCTTCACGTTGA+AGG | - | chr1.2:29859679-29859698 | MS.gene67010:CDS | 65.0% | |
CGGCTCCGCGGCATCTACAT+CGG | - | chr1.2:29860902-29860921 | MS.gene67010:CDS | 65.0% | |
CGGTGACCGTGGAAGCTGCT+TGG | + | chr1.2:29859423-29859442 | None:intergenic | 65.0% | |
GATGTAGATGCCGCGGAGCC+GGG | + | chr1.2:29860903-29860922 | None:intergenic | 65.0% | |
GGTGGCTGAGCCGATTGGAC+CGG | - | chr1.2:29860071-29860090 | MS.gene67010:CDS | 65.0% | |
GGTTAGGGCTACTGTCCGGG+AGG | - | chr1.2:29860973-29860992 | MS.gene67010:CDS | 65.0% | |
GGTTGCCTGCACTTTCCCGG+CGG | + | chr1.2:29859453-29859472 | None:intergenic | 65.0% | |
GTGGCTGAGCCGATTGGACC+GGG | - | chr1.2:29860072-29860091 | MS.gene67010:CDS | 65.0% | |
GTTCACTCGTTTGCCGGCGG+TGG | - | chr1.2:29859665-29859684 | MS.gene67010:CDS | 65.0% | |
TGAGCCGATTGGACCGGGTG+TGG | - | chr1.2:29860077-29860096 | MS.gene67010:CDS | 65.0% | |
! | ACCAACCGCCGGGAAAGTGC+AGG | - | chr1.2:29859445-29859464 | MS.gene67010:CDS | 65.0% |
AACGACGCAGCGGCCACACC+CGG | + | chr1.2:29860093-29860112 | None:intergenic | 70.0% | |
CGCGACACGCGCGGAGCTTA+AGG | + | chr1.2:29859882-29859901 | None:intergenic | 70.0% | |
CGGTCACCGGAACCAACCGC+CGG | - | chr1.2:29859434-29859453 | MS.gene67010:CDS | 70.0% | |
GCCTGCACTTTCCCGGCGGT+TGG | + | chr1.2:29859449-29859468 | None:intergenic | 70.0% | |
GCGGCCACACCCGGTCCAAT+CGG | + | chr1.2:29860084-29860103 | None:intergenic | 70.0% | |
GGTCACCGGAACCAACCGCC+GGG | - | chr1.2:29859435-29859454 | MS.gene67010:CDS | 70.0% | |
TCCTGCAATGCCCGGCTCCG+CGG | - | chr1.2:29860890-29860909 | MS.gene67010:CDS | 70.0% | |
! | GCGGTTGGTTCCGGTGACCG+TGG | + | chr1.2:29859434-29859453 | None:intergenic | 70.0% |
!! | GCCGCGGAGCCGGGCATTGC+AGG | + | chr1.2:29860894-29860913 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 29859415 | 29861053 | 29859415 | ID=MS.gene67010 |
chr1.2 | mRNA | 29859415 | 29861053 | 29859415 | ID=MS.gene67010.t1;Parent=MS.gene67010 |
chr1.2 | exon | 29859415 | 29861053 | 29859415 | ID=MS.gene67010.t1.exon1;Parent=MS.gene67010.t1 |
chr1.2 | CDS | 29859415 | 29861053 | 29859415 | ID=cds.MS.gene67010.t1;Parent=MS.gene67010.t1 |
Gene Sequence |
Protein sequence |