Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50738.t1 | XP_003606998.1 | 91.5 | 329 | 8 | 1 | 222 | 530 | 34 | 362 | 1.10E-174 | 623.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50738.t1 | P43295 | 70.8 | 339 | 75 | 3 | 209 | 525 | 22 | 358 | 5.1e-141 | 502.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50738.t1 | G7JIL2 | 91.5 | 329 | 8 | 1 | 222 | 530 | 34 | 362 | 7.8e-175 | 623.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050945 | MS.gene50738 | 0.808581 | 2.89E-50 | -1.69E-46 |
MS.gene054004 | MS.gene50738 | 0.810128 | 1.34E-50 | -1.69E-46 |
MS.gene055150 | MS.gene50738 | 0.803248 | 3.82E-49 | -1.69E-46 |
MS.gene055886 | MS.gene50738 | 0.835907 | 1.28E-56 | -1.69E-46 |
MS.gene059949 | MS.gene50738 | 0.823158 | 1.61E-53 | -1.69E-46 |
MS.gene060244 | MS.gene50738 | 0.810964 | 8.87E-51 | -1.69E-46 |
MS.gene060522 | MS.gene50738 | 0.820624 | 6.22E-53 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50738.t1 | MTR_4g071060 | 91.489 | 329 | 8 | 1 | 222 | 530 | 34 | 362 | 0.0 | 630 |
MS.gene50738.t1 | MTR_1g023210 | 70.303 | 330 | 75 | 3 | 221 | 528 | 36 | 364 | 1.87e-171 | 489 |
MS.gene50738.t1 | MTR_4g072340 | 65.109 | 321 | 60 | 4 | 231 | 531 | 43 | 331 | 9.08e-146 | 422 |
MS.gene50738.t1 | MTR_4g073660 | 65.109 | 321 | 60 | 4 | 231 | 531 | 42 | 330 | 9.16e-146 | 422 |
MS.gene50738.t1 | MTR_4g072790 | 66.149 | 322 | 51 | 5 | 231 | 531 | 43 | 327 | 1.60e-145 | 421 |
MS.gene50738.t1 | MTR_1g094135 | 55.319 | 329 | 122 | 4 | 223 | 528 | 44 | 370 | 8.66e-131 | 386 |
MS.gene50738.t1 | MTR_4g047610 | 39.542 | 306 | 139 | 9 | 242 | 516 | 44 | 334 | 1.53e-61 | 206 |
MS.gene50738.t1 | MTR_4g079470 | 39.809 | 314 | 143 | 10 | 233 | 516 | 39 | 336 | 8.01e-61 | 204 |
MS.gene50738.t1 | MTR_4g079770 | 40.132 | 304 | 137 | 9 | 243 | 516 | 48 | 336 | 1.60e-60 | 203 |
MS.gene50738.t1 | MTR_4g079800 | 38.558 | 319 | 150 | 10 | 233 | 521 | 39 | 341 | 6.10e-60 | 202 |
MS.gene50738.t1 | MTR_5g022560 | 39.048 | 315 | 145 | 10 | 233 | 516 | 37 | 335 | 1.20e-59 | 201 |
MS.gene50738.t1 | MTR_1g107550 | 40.667 | 300 | 132 | 7 | 238 | 509 | 54 | 335 | 1.71e-59 | 204 |
MS.gene50738.t1 | MTR_4g125300 | 40.000 | 310 | 147 | 8 | 236 | 521 | 51 | 345 | 2.66e-59 | 200 |
MS.gene50738.t1 | MTR_4g094918 | 40.129 | 309 | 122 | 10 | 238 | 509 | 39 | 321 | 3.46e-59 | 200 |
MS.gene50738.t1 | MTR_3g116080 | 37.658 | 316 | 149 | 9 | 236 | 521 | 47 | 344 | 1.46e-57 | 196 |
MS.gene50738.t1 | MTR_4g080700 | 36.792 | 318 | 156 | 9 | 226 | 516 | 32 | 331 | 2.12e-57 | 195 |
MS.gene50738.t1 | MTR_4g107930 | 38.889 | 306 | 141 | 9 | 242 | 516 | 46 | 336 | 4.01e-57 | 194 |
MS.gene50738.t1 | MTR_4g079440 | 36.156 | 307 | 154 | 9 | 236 | 516 | 46 | 336 | 1.24e-56 | 193 |
MS.gene50738.t1 | MTR_4g080730 | 36.755 | 302 | 148 | 8 | 242 | 516 | 46 | 331 | 1.86e-56 | 192 |
MS.gene50738.t1 | MTR_3g102220 | 36.709 | 316 | 149 | 7 | 225 | 509 | 46 | 341 | 5.24e-56 | 195 |
MS.gene50738.t1 | MTR_1g018840 | 39.482 | 309 | 124 | 10 | 238 | 509 | 59 | 341 | 2.47e-55 | 193 |
MS.gene50738.t1 | MTR_1g018840 | 39.482 | 309 | 124 | 10 | 238 | 509 | 59 | 341 | 2.60e-55 | 192 |
MS.gene50738.t1 | MTR_3g112430 | 37.383 | 321 | 148 | 11 | 236 | 521 | 36 | 338 | 1.64e-54 | 190 |
MS.gene50738.t1 | MTR_3g075390 | 37.124 | 299 | 139 | 9 | 251 | 516 | 54 | 336 | 1.02e-53 | 186 |
MS.gene50738.t1 | MTR_2g075830 | 37.333 | 300 | 147 | 7 | 244 | 516 | 47 | 332 | 2.58e-53 | 184 |
MS.gene50738.t1 | MTR_4g080360 | 35.505 | 307 | 150 | 9 | 242 | 516 | 43 | 333 | 2.65e-53 | 184 |
MS.gene50738.t1 | MTR_4g104370 | 37.171 | 304 | 141 | 9 | 246 | 516 | 49 | 335 | 8.22e-53 | 183 |
MS.gene50738.t1 | MTR_2g090890 | 35.161 | 310 | 161 | 7 | 242 | 527 | 45 | 338 | 1.18e-50 | 177 |
MS.gene50738.t1 | MTR_2g016270 | 36.601 | 306 | 155 | 11 | 236 | 521 | 51 | 337 | 6.49e-50 | 178 |
MS.gene50738.t1 | MTR_2g015850 | 37.324 | 284 | 135 | 7 | 252 | 509 | 78 | 344 | 9.02e-49 | 172 |
MS.gene50738.t1 | MTR_2g016180 | 35.514 | 321 | 153 | 12 | 236 | 521 | 51 | 352 | 3.65e-48 | 174 |
MS.gene50738.t1 | MTR_2g015920 | 33.333 | 324 | 151 | 11 | 236 | 518 | 53 | 352 | 4.39e-47 | 168 |
MS.gene50738.t1 | MTR_4g065077 | 34.627 | 335 | 154 | 13 | 225 | 520 | 44 | 352 | 4.92e-47 | 168 |
MS.gene50738.t1 | MTR_2g083930 | 35.220 | 318 | 155 | 12 | 244 | 526 | 43 | 344 | 1.11e-46 | 166 |
MS.gene50738.t1 | MTR_7g078600 | 32.602 | 319 | 178 | 9 | 220 | 516 | 26 | 329 | 1.05e-44 | 161 |
MS.gene50738.t1 | MTR_8g086470 | 33.537 | 328 | 151 | 12 | 225 | 520 | 60 | 352 | 1.18e-43 | 159 |
MS.gene50738.t1 | MTR_2g015930 | 31.902 | 326 | 152 | 11 | 236 | 517 | 52 | 351 | 2.29e-41 | 152 |
MS.gene50738.t1 | MTR_8g087510 | 50.735 | 136 | 56 | 3 | 340 | 474 | 23 | 148 | 8.85e-41 | 145 |
MS.gene50738.t1 | MTR_2g067900 | 33.333 | 339 | 159 | 14 | 227 | 521 | 7 | 322 | 3.16e-40 | 148 |
MS.gene50738.t1 | MTR_7g079230 | 31.667 | 300 | 174 | 8 | 224 | 516 | 52 | 327 | 9.36e-40 | 147 |
MS.gene50738.t1 | MTR_1g023810 | 41.395 | 215 | 106 | 7 | 304 | 515 | 54 | 251 | 2.21e-37 | 139 |
MS.gene50738.t1 | MTR_2g064475 | 35.366 | 246 | 119 | 11 | 298 | 530 | 134 | 352 | 7.07e-35 | 134 |
MS.gene50738.t1 | MTR_2g067560 | 31.818 | 330 | 152 | 12 | 227 | 509 | 7 | 310 | 1.39e-32 | 133 |
MS.gene50738.t1 | MTR_2g066980 | 28.363 | 342 | 148 | 13 | 227 | 523 | 26 | 315 | 3.35e-27 | 112 |
MS.gene50738.t1 | MTR_7g078630 | 29.921 | 254 | 150 | 6 | 236 | 476 | 706 | 944 | 5.45e-25 | 110 |
MS.gene50738.t1 | MTR_7g111050 | 30.800 | 250 | 133 | 10 | 297 | 521 | 98 | 332 | 3.08e-20 | 92.8 |
MS.gene50738.t1 | MTR_7g111060 | 29.344 | 259 | 145 | 9 | 288 | 522 | 92 | 336 | 7.03e-20 | 91.7 |
MS.gene50738.t1 | MTR_1g025450 | 36.559 | 186 | 89 | 7 | 292 | 474 | 48 | 207 | 1.45e-18 | 89.4 |
MS.gene50738.t1 | MTR_7g078310 | 42.857 | 98 | 47 | 2 | 304 | 399 | 157 | 247 | 1.26e-14 | 74.3 |
MS.gene50738.t1 | MTR_2g047960 | 42.391 | 92 | 45 | 1 | 303 | 394 | 2 | 85 | 2.76e-14 | 69.3 |
MS.gene50738.t1 | MTR_2g015840 | 33.333 | 141 | 64 | 3 | 242 | 352 | 39 | 179 | 1.71e-13 | 71.2 |
MS.gene50738.t1 | MTR_2g015840 | 34.746 | 118 | 69 | 3 | 412 | 528 | 161 | 271 | 2.85e-13 | 70.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50738.t1 | AT2G21430 | 70.588 | 340 | 76 | 3 | 209 | 526 | 22 | 359 | 7.27e-179 | 508 |
MS.gene50738.t1 | AT4G39090 | 71.299 | 331 | 74 | 1 | 221 | 530 | 36 | 366 | 8.11e-178 | 505 |
MS.gene50738.t1 | AT4G16190 | 69.605 | 329 | 77 | 3 | 224 | 529 | 43 | 371 | 5.49e-165 | 473 |
MS.gene50738.t1 | AT3G54940 | 59.159 | 333 | 106 | 5 | 221 | 524 | 31 | 362 | 1.12e-140 | 410 |
MS.gene50738.t1 | AT3G54940 | 54.251 | 247 | 84 | 4 | 221 | 439 | 31 | 276 | 2.43e-87 | 271 |
MS.gene50738.t1 | AT3G45310 | 40.810 | 321 | 144 | 10 | 230 | 521 | 50 | 353 | 4.37e-63 | 210 |
MS.gene50738.t1 | AT5G60360 | 40.187 | 321 | 146 | 10 | 230 | 521 | 50 | 353 | 5.88e-63 | 210 |
MS.gene50738.t1 | AT3G19400 | 38.973 | 331 | 148 | 11 | 224 | 521 | 36 | 345 | 3.93e-62 | 208 |
MS.gene50738.t1 | AT5G60360 | 40.635 | 315 | 141 | 10 | 230 | 515 | 50 | 347 | 1.05e-61 | 207 |
MS.gene50738.t1 | AT3G45310 | 40.764 | 314 | 140 | 10 | 230 | 514 | 50 | 346 | 1.18e-61 | 206 |
MS.gene50738.t1 | AT5G60360 | 40.446 | 314 | 141 | 10 | 230 | 514 | 50 | 346 | 2.56e-61 | 206 |
MS.gene50738.t1 | AT3G19390 | 38.304 | 342 | 157 | 11 | 215 | 521 | 20 | 342 | 2.06e-59 | 203 |
MS.gene50738.t1 | AT1G20850 | 39.308 | 318 | 143 | 9 | 236 | 521 | 51 | 350 | 2.80e-59 | 200 |
MS.gene50738.t1 | AT1G09850 | 38.080 | 323 | 151 | 10 | 236 | 527 | 32 | 336 | 8.30e-59 | 201 |
MS.gene50738.t1 | AT1G47128 | 39.527 | 296 | 139 | 6 | 238 | 509 | 54 | 333 | 1.33e-58 | 201 |
MS.gene50738.t1 | AT5G43060 | 41.135 | 282 | 125 | 8 | 252 | 509 | 70 | 334 | 2.97e-57 | 198 |
MS.gene50738.t1 | AT3G43960 | 37.963 | 324 | 158 | 8 | 215 | 509 | 18 | 327 | 2.36e-56 | 193 |
MS.gene50738.t1 | AT4G36880 | 38.062 | 289 | 132 | 6 | 252 | 509 | 69 | 341 | 5.51e-55 | 189 |
MS.gene50738.t1 | AT4G35350 | 36.392 | 316 | 154 | 9 | 236 | 521 | 51 | 349 | 5.58e-55 | 189 |
MS.gene50738.t1 | AT5G45890 | 32.873 | 362 | 180 | 9 | 190 | 516 | 4 | 337 | 6.69e-55 | 188 |
MS.gene50738.t1 | AT1G29090 | 38.006 | 321 | 145 | 12 | 232 | 516 | 44 | 346 | 7.32e-55 | 189 |
MS.gene50738.t1 | AT1G06260 | 37.700 | 313 | 134 | 13 | 245 | 521 | 52 | 339 | 1.29e-53 | 185 |
MS.gene50738.t1 | AT3G48340 | 36.503 | 326 | 154 | 9 | 218 | 509 | 18 | 324 | 5.30e-53 | 184 |
MS.gene50738.t1 | AT4G23520 | 34.650 | 329 | 161 | 12 | 225 | 521 | 40 | 346 | 3.98e-52 | 181 |
MS.gene50738.t1 | AT2G27420 | 34.810 | 316 | 148 | 10 | 242 | 516 | 41 | 339 | 1.68e-51 | 179 |
MS.gene50738.t1 | AT5G50260 | 37.821 | 312 | 129 | 10 | 246 | 516 | 47 | 334 | 2.01e-51 | 179 |
MS.gene50738.t1 | AT3G48350 | 37.671 | 292 | 122 | 9 | 256 | 510 | 57 | 325 | 1.43e-49 | 175 |
MS.gene50738.t1 | AT1G29080 | 35.669 | 314 | 152 | 9 | 242 | 521 | 45 | 342 | 4.27e-49 | 173 |
MS.gene50738.t1 | AT3G49340 | 33.546 | 313 | 155 | 10 | 242 | 519 | 41 | 335 | 2.21e-48 | 171 |
MS.gene50738.t1 | AT2G34080 | 35.370 | 311 | 146 | 11 | 242 | 516 | 45 | 336 | 6.44e-48 | 170 |
MS.gene50738.t1 | AT4G11310 | 32.213 | 357 | 185 | 9 | 199 | 516 | 6 | 344 | 8.44e-47 | 167 |
MS.gene50738.t1 | AT3G19400 | 38.211 | 246 | 116 | 6 | 224 | 444 | 36 | 270 | 5.27e-46 | 163 |
MS.gene50738.t1 | AT4G11320 | 33.333 | 315 | 157 | 8 | 236 | 516 | 56 | 351 | 4.04e-45 | 163 |
MS.gene50738.t1 | AT4G11320 | 33.333 | 315 | 157 | 8 | 236 | 516 | 56 | 351 | 4.04e-45 | 163 |
MS.gene50738.t1 | AT4G35350 | 35.193 | 233 | 118 | 5 | 236 | 444 | 51 | 274 | 8.88e-40 | 146 |
MS.gene50738.t1 | AT1G29110 | 31.013 | 316 | 153 | 9 | 242 | 521 | 44 | 330 | 1.23e-39 | 147 |
MS.gene50738.t1 | AT3G48350 | 35.146 | 239 | 102 | 6 | 256 | 455 | 57 | 281 | 7.79e-35 | 133 |
MS.gene50738.t1 | AT1G02305 | 30.800 | 250 | 131 | 11 | 297 | 520 | 104 | 337 | 2.95e-19 | 90.1 |
MS.gene50738.t1 | AT4G01610 | 30.213 | 235 | 126 | 10 | 305 | 517 | 113 | 331 | 3.53e-19 | 89.7 |
MS.gene50738.t1 | AT4G01610 | 29.787 | 235 | 127 | 10 | 305 | 517 | 113 | 331 | 5.80e-18 | 85.9 |
MS.gene50738.t1 | AT1G02300 | 29.778 | 225 | 120 | 11 | 318 | 520 | 146 | 354 | 5.96e-17 | 83.2 |
Find 120 sgRNAs with CRISPR-Local
Find 367 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGCATATATACTGCATTTA+AGG | 0.130654 | 4.3:+34227936 | None:intergenic |
TTCTTTATTGGTTGTCTCTA+TGG | 0.155563 | 4.3:+34230921 | None:intergenic |
AACCTATTTAAACATAAGTT+TGG | 0.234066 | 4.3:-34229261 | MS.gene50738:CDS |
TCCCAAACTTATGTTTAAAT+AGG | 0.268902 | 4.3:+34229259 | None:intergenic |
TGCTCATCTCTTCTTTCTCT+TGG | 0.271304 | 4.3:+34230509 | None:intergenic |
CCAAGGATGAACATGATTAC+AGG | 0.304516 | 4.3:-34229224 | MS.gene50738:CDS |
GGTGAGACTTGGGGAGAAAA+TGG | 0.310928 | 4.3:-34227772 | MS.gene50738:CDS |
CTGGAGCCTATTCGCCTATT+AGG | 0.320950 | 4.3:-34227834 | MS.gene50738:CDS |
GGAGTTTCGTCAGAGCGTTT+TGG | 0.321592 | 4.3:-34229100 | MS.gene50738:CDS |
CCTGAGAAGTATCTGCTTGA+TGG | 0.345792 | 4.3:+34230994 | None:intergenic |
CCACATGAGCGAGAAAAGTT+TGG | 0.355767 | 4.3:-34232063 | MS.gene50738:CDS |
GAAGAAGACTATCCTTATTC+TGG | 0.363696 | 4.3:-34228191 | MS.gene50738:CDS |
CCACGATCAGTACCAGAATA+AGG | 0.365501 | 4.3:+34228179 | None:intergenic |
ACTAGATCATGGAGTGTTAC+TGG | 0.371273 | 4.3:-34227869 | MS.gene50738:CDS |
TCTTTCTCTTGGTCATTCTC+AGG | 0.376250 | 4.3:+34230520 | None:intergenic |
ACCTATTTAAACATAAGTTT+GGG | 0.393244 | 4.3:-34229260 | MS.gene50738:CDS |
TTCAATGCCCTCTTTCCATC+TGG | 0.395147 | 4.3:+34230826 | None:intergenic |
AGTGGTTGACCCTTGATGTT+TGG | 0.395213 | 4.3:+34232017 | None:intergenic |
AGTCTCTTTGAGCATATGTA+TGG | 0.401014 | 4.3:+34227889 | None:intergenic |
TATGTAAACTTCACTGAGAA+AGG | 0.406154 | 4.3:-34230967 | MS.gene50738:CDS |
ATGGCTTCCATGAAGCTTTG+AGG | 0.406974 | 4.3:+34230940 | None:intergenic |
GGCTTCTCCTTCATCCTAAT+AGG | 0.407412 | 4.3:+34227820 | None:intergenic |
TCACAAGAACCCGGTTGCTC+TGG | 0.408096 | 4.3:+34228284 | None:intergenic |
GGAGTGTTACTGGTGGGATA+TGG | 0.410428 | 4.3:-34227859 | MS.gene50738:CDS |
GCTACCCACAGCTGAAGAAT+AGG | 0.411440 | 4.3:+34230480 | None:intergenic |
TAAAATTACCAGATGGAAAG+AGG | 0.419809 | 4.3:-34230834 | MS.gene50738:CDS |
GGATGAAGGAGAAGCCATAT+TGG | 0.423435 | 4.3:-34227813 | MS.gene50738:CDS |
TGCTAAGAAGCATCAATTGA+TGG | 0.425569 | 4.3:-34229172 | MS.gene50738:CDS |
AGGCTCTCTGTATGTTATGC+AGG | 0.426835 | 4.3:-34232156 | MS.gene50738:CDS |
CTCGTTGATCTTCTCAATTG+AGG | 0.429167 | 4.3:+34231027 | None:intergenic |
CTTCATCCTAATAGGCGAAT+AGG | 0.432818 | 4.3:+34227828 | None:intergenic |
TGACAAGATTAGCGGCAATC+TGG | 0.437809 | 4.3:+34228084 | None:intergenic |
CAACCGGGTTCTTGTGATGC+CGG | 0.438520 | 4.3:-34228278 | MS.gene50738:CDS |
ATAGTGTGATCCAGAGCAAC+CGG | 0.450276 | 4.3:-34228294 | MS.gene50738:intron |
TCTTGTGATGCCGGGTGCAA+TGG | 0.456716 | 4.3:-34228269 | MS.gene50738:CDS |
CCTGTAATCATGTTCATCCT+TGG | 0.456777 | 4.3:+34229224 | None:intergenic |
AAAACTCATGGGGTGAGACT+TGG | 0.466256 | 4.3:-34227783 | MS.gene50738:CDS |
GCATCAATTGATGGATCCTT+CGG | 0.466749 | 4.3:-34229163 | MS.gene50738:CDS |
TGTTGGAGTTTCAGTACAAC+CGG | 0.469204 | 4.3:-34228841 | MS.gene50738:CDS |
ATGGATCCTTCGGCGGTTCA+CGG | 0.470073 | 4.3:-34229153 | MS.gene50738:CDS |
AAACTCATGGGGTGAGACTT+GGG | 0.470356 | 4.3:-34227782 | MS.gene50738:CDS |
ATGGATACTACAAAATATGC+AGG | 0.476628 | 4.3:-34227753 | MS.gene50738:CDS |
CCTGTGCATGTTCCGTTACC+TGG | 0.477809 | 4.3:-34230571 | MS.gene50738:CDS |
CTACCCACAGCTGAAGAATA+GGG | 0.479660 | 4.3:+34230481 | None:intergenic |
AGGGGAACCTCAAAGCTTCA+TGG | 0.481569 | 4.3:-34230947 | MS.gene50738:CDS |
AACCGGGTTCTTGTGATGCC+GGG | 0.494687 | 4.3:-34228277 | MS.gene50738:CDS |
AGATTGCATCTCTTCTTCCA+TGG | 0.498414 | 4.3:+34230885 | None:intergenic |
ATGTAAACTTCACTGAGAAA+GGG | 0.498898 | 4.3:-34230966 | MS.gene50738:CDS |
TGCAGACCATGGCGTACATA+AGG | 0.500035 | 4.3:+34230458 | None:intergenic |
TTACTGGTGGGATATGGATC+TGG | 0.507620 | 4.3:-34227853 | MS.gene50738:CDS |
ATCTCAAGAAAGTTCTTGAA+AGG | 0.511089 | 4.3:-34230615 | MS.gene50738:CDS |
TCAATTGATGCTTCTTAGCA+CGG | 0.511562 | 4.3:+34229175 | None:intergenic |
GACGATGAAGAAGTGCGGTT+GGG | 0.513257 | 4.3:-34229300 | MS.gene50738:CDS |
GAATCATCTTCCAAACATCA+AGG | 0.513638 | 4.3:-34232027 | MS.gene50738:CDS |
TGGGAAGGTTTATTCTTCCA+AGG | 0.519917 | 4.3:-34229241 | MS.gene50738:CDS |
GGTGCTCACTTTCTCTCGAC+CGG | 0.523916 | 4.3:-34228808 | MS.gene50738:CDS |
GGTGCCCTATTCTTCAGCTG+TGG | 0.526340 | 4.3:-34230485 | MS.gene50738:CDS |
CCTACAGCATAACCGATGTC+TGG | 0.542961 | 4.3:+34230430 | None:intergenic |
CCTTATTCTGGTACTGATCG+TGG | 0.543158 | 4.3:-34228179 | MS.gene50738:CDS |
CGACGATGAAGAAGTGCGGT+TGG | 0.543666 | 4.3:-34229301 | MS.gene50738:CDS |
CTTTAGCACTTACTAGCAAG+AGG | 0.547021 | 4.3:+34228053 | None:intergenic |
ACCGTTCTTGACAAGATTAG+CGG | 0.547122 | 4.3:+34228076 | None:intergenic |
GTGCCCTATTCTTCAGCTGT+GGG | 0.550386 | 4.3:-34230484 | MS.gene50738:CDS |
CCATCAAGCAGATACTTCTC+AGG | 0.552246 | 4.3:-34230994 | MS.gene50738:CDS |
AGTACAACCGGTGCACTTGA+AGG | 0.552820 | 4.3:-34228829 | MS.gene50738:CDS |
AAACTCCCTCGGAGTAAGAT+CGG | 0.553683 | 4.3:+34229116 | None:intergenic |
CCAGGTAACGGAACATGCAC+AGG | 0.555545 | 4.3:+34230571 | None:intergenic |
TTCTTCGCGCATCACCCCAC+CGG | 0.555594 | 4.3:+34228208 | None:intergenic |
CCAGACATCGGTTATGCTGT+AGG | 0.556943 | 4.3:-34230430 | MS.gene50738:CDS |
CATCAGACCACCATTGCACC+CGG | 0.562811 | 4.3:+34228259 | None:intergenic |
GTCTGGCCTCGTGCAGACCA+TGG | 0.563338 | 4.3:+34230447 | None:intergenic |
CTATTCGCCTATTAGGATGA+AGG | 0.564118 | 4.3:-34227827 | MS.gene50738:CDS |
GAACTGTGGCACAAACGACT+TGG | 0.565258 | 4.3:-34232086 | MS.gene50738:CDS |
TGCTCAAAGAGACTAGATCA+TGG | 0.566764 | 4.3:-34227880 | MS.gene50738:CDS |
TGTAAACTTCACTGAGAAAG+GGG | 0.577439 | 4.3:-34230965 | MS.gene50738:CDS |
GGCTCTCTGTATGTTATGCA+GGG | 0.583723 | 4.3:-34232155 | MS.gene50738:CDS |
GTCTCTTTGAGCATATGTAT+GGG | 0.587803 | 4.3:+34227890 | None:intergenic |
ATTTAAACATAAGTTTGGGA+AGG | 0.587990 | 4.3:-34229256 | MS.gene50738:CDS |
GCCGCTAATCTTGTCAAGAA+CGG | 0.589186 | 4.3:-34228077 | MS.gene50738:CDS |
AAAATTACCAGATGGAAAGA+GGG | 0.591408 | 4.3:-34230833 | MS.gene50738:CDS |
AATCATCTTCCAAACATCAA+GGG | 0.591800 | 4.3:-34232026 | MS.gene50738:intron |
GTGAGCACCTTCAAGTGCAC+CGG | 0.592969 | 4.3:+34228822 | None:intergenic |
AACTCATGGGGTGAGACTTG+GGG | 0.593059 | 4.3:-34227781 | MS.gene50738:CDS |
TTACTAAGTTTCATATGACC+AGG | 0.594545 | 4.3:+34230553 | None:intergenic |
ACTTGTCGATTGTGATCATG+AGG | 0.595475 | 4.3:-34228758 | MS.gene50738:intron |
TGGATACTACAAAATATGCA+GGG | 0.599253 | 4.3:-34227752 | MS.gene50738:CDS |
GTATATATGCAAACATACAT+TGG | 0.601664 | 4.3:-34227925 | MS.gene50738:CDS |
TGTGATGCCGGGTGCAATGG+TGG | 0.601772 | 4.3:-34228266 | MS.gene50738:CDS |
TATATGCGGAGTGGACTCCA+TGG | 0.603926 | 4.3:-34227722 | MS.gene50738:CDS |
ACGCTCTGACGAAACTCCCT+CGG | 0.605558 | 4.3:+34229105 | None:intergenic |
ATTCTCCGATCTTACTCCGA+GGG | 0.607597 | 4.3:-34229121 | MS.gene50738:CDS |
CACCCGGCATCACAAGAACC+CGG | 0.609271 | 4.3:+34228275 | None:intergenic |
TATATGCAAACATACATTGG+AGG | 0.612222 | 4.3:-34227922 | MS.gene50738:CDS |
GGGTAGCCTTATGTACGCCA+TGG | 0.613486 | 4.3:-34230464 | MS.gene50738:CDS |
CTACTGAGTAGTAGTATGAA+CGG | 0.624053 | 4.3:+34227684 | None:intergenic |
GGACTCCATGGTTTCTACTG+TGG | 0.626354 | 4.3:-34227710 | MS.gene50738:CDS |
GACCTGGTAAAATTACCAGA+TGG | 0.629718 | 4.3:-34230841 | MS.gene50738:CDS |
AGAGAAAGAAGAGATGAGCA+AGG | 0.630245 | 4.3:-34230506 | MS.gene50738:CDS |
TCAATTGATGGATCCTTCGG+CGG | 0.633662 | 4.3:-34229160 | MS.gene50738:CDS |
GATCATGGAGTGTTACTGGT+GGG | 0.636411 | 4.3:-34227865 | MS.gene50738:CDS |
GTAACACCGTGAACCGCCGA+AGG | 0.638844 | 4.3:+34229147 | None:intergenic |
TAGTGTGATCCAGAGCAACC+GGG | 0.639888 | 4.3:-34228293 | MS.gene50738:CDS |
AGGGCTCGTGTGGATCATGT+TGG | 0.640660 | 4.3:-34228858 | MS.gene50738:CDS |
GTCTGCACGAGGCCAGACAT+CGG | 0.643214 | 4.3:-34230442 | MS.gene50738:CDS |
ATCATGAATTAGGGCTCGTG+TGG | 0.646039 | 4.3:-34228868 | MS.gene50738:intron |
GGCAGCCACAGTAGAAACCA+TGG | 0.655273 | 4.3:+34227705 | None:intergenic |
AGTTTCATATGACCAGGTAA+CGG | 0.656108 | 4.3:+34230559 | None:intergenic |
ATCGTTCGAGAAGAATGTTG+TGG | 0.657117 | 4.3:-34230654 | MS.gene50738:CDS |
TATGCAGGGAAAGATAAACA+AGG | 0.666815 | 4.3:-34232141 | MS.gene50738:CDS |
AGATCATGGAGTGTTACTGG+TGG | 0.667806 | 4.3:-34227866 | MS.gene50738:CDS |
GGATACTACAAAATATGCAG+GGG | 0.670950 | 4.3:-34227751 | MS.gene50738:CDS |
ATGCAGGGAAAGATAAACAA+GGG | 0.675651 | 4.3:-34232140 | MS.gene50738:CDS |
AGAGAACCAGACGTATGACC+TGG | 0.678044 | 4.3:-34230857 | MS.gene50738:CDS |
TGCAGGGGACGAAATATATG+CGG | 0.679393 | 4.3:-34227736 | MS.gene50738:CDS |
GGGACGAAATATATGCGGAG+TGG | 0.687467 | 4.3:-34227731 | MS.gene50738:CDS |
GGAAGCATGATCATTGCTCG+TGG | 0.693757 | 4.3:-34232188 | None:intergenic |
TGTACGCCATGGTCTGCACG+AGG | 0.697121 | 4.3:-34230453 | MS.gene50738:CDS |
AATTCTCCGATCTTACTCCG+AGG | 0.702571 | 4.3:-34229122 | MS.gene50738:CDS |
TGGTCGACGATGAAGAAGTG+CGG | 0.727360 | 4.3:-34229305 | MS.gene50738:CDS |
AAGACATGAGCAAAGAACTG+TGG | 0.731330 | 4.3:-34232100 | MS.gene50738:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATTATATGTTATCTAAAT+TGG | - | chr4.3:34231525-34231544 | MS.gene50738:intron | 10.0% |
!! | AGATATACTATTAATTACAA+AGG | + | chr4.3:34231157-34231176 | None:intergenic | 15.0% |
!! | ATCTTTACAGAATTATTTAT+TGG | - | chr4.3:34231459-34231478 | MS.gene50738:intron | 15.0% |
!! | GATATACTATTAATTACAAA+GGG | + | chr4.3:34231156-34231175 | None:intergenic | 15.0% |
!! | TCTTTACAGAATTATTTATT+GGG | - | chr4.3:34231460-34231479 | MS.gene50738:intron | 15.0% |
!! | AACCTATTTAAACATAAGTT+TGG | - | chr4.3:34230605-34230624 | MS.gene50738:CDS | 20.0% |
!! | AATCTCCACTATAATAATAA+TGG | + | chr4.3:34230350-34230369 | None:intergenic | 20.0% |
!! | AATTAATAGTATATCTGCTA+AGG | - | chr4.3:34231161-34231180 | MS.gene50738:intron | 20.0% |
!! | ACCTATTTAAACATAAGTTT+GGG | - | chr4.3:34230606-34230625 | MS.gene50738:CDS | 20.0% |
!! | ATACAATATCTAATAGAGTT+TGG | + | chr4.3:34231294-34231313 | None:intergenic | 20.0% |
!! | ATATGTTATCTAAATTGGTT+TGG | - | chr4.3:34231530-34231549 | MS.gene50738:intron | 20.0% |
!! | ATCTCCACTATAATAATAAT+GGG | + | chr4.3:34230349-34230368 | None:intergenic | 20.0% |
!! | ATTAATTACAAAGGGAAAAT+AGG | + | chr4.3:34231148-34231167 | None:intergenic | 20.0% |
!! | ATTGGATAATTAAAAACTCA+TGG | - | chr4.3:34232071-34232090 | MS.gene50738:CDS | 20.0% |
!! | TATCTGATATTAATCTTTCT+AGG | - | chr4.3:34231238-34231257 | MS.gene50738:intron | 20.0% |
!! | TATTCCCATTATTATTATAG+TGG | - | chr4.3:34230342-34230361 | MS.gene50738:intron | 20.0% |
!! | TTGGATAATTAAAAACTCAT+GGG | - | chr4.3:34232072-34232091 | MS.gene50738:CDS | 20.0% |
!!! | AAAACAAATTTTGATTGTGT+TGG | - | chr4.3:34230968-34230987 | MS.gene50738:CDS | 20.0% |
!!! | AAACAAATTTTGATTGTGTT+GGG | - | chr4.3:34230969-34230988 | MS.gene50738:CDS | 20.0% |
!!! | AAATGCTAACTTGTAATATT+TGG | - | chr4.3:34231483-34231502 | MS.gene50738:intron | 20.0% |
!!! | AATGCTAACTTGTAATATTT+GGG | - | chr4.3:34231484-34231503 | MS.gene50738:intron | 20.0% |
!!! | GAGTTTTTAATTATCCAATA+TGG | + | chr4.3:34232070-34232089 | None:intergenic | 20.0% |
!!! | TTTGAGTACATTTTAAAATC+CGG | - | chr4.3:34231639-34231658 | MS.gene50738:intron | 20.0% |
! | AAATGTTTAAGAACAGACAA+TGG | - | chr4.3:34228146-34228165 | MS.gene50738:CDS | 25.0% |
! | ACTCTATTAGATATTGTATG+AGG | - | chr4.3:34231295-34231314 | MS.gene50738:intron | 25.0% |
! | AGACAACCAATAAAGAAAAA+TGG | - | chr4.3:34228951-34228970 | MS.gene50738:intron | 25.0% |
! | ATTTAAACATAAGTTTGGGA+AGG | - | chr4.3:34230610-34230629 | MS.gene50738:CDS | 25.0% |
! | GTATATATGCAAACATACAT+TGG | - | chr4.3:34231941-34231960 | MS.gene50738:intron | 25.0% |
! | TCCCAAACTTATGTTTAAAT+AGG | + | chr4.3:34230610-34230629 | None:intergenic | 25.0% |
! | TGGATAATTAAAAACTCATG+GGG | - | chr4.3:34232073-34232092 | MS.gene50738:CDS | 25.0% |
! | TTGCATATATACTGCATTTA+AGG | + | chr4.3:34231933-34231952 | None:intergenic | 25.0% |
!! | AAAACTTCCCAAATCATTTT+GGG | - | chr4.3:34228319-34228338 | MS.gene50738:intron | 25.0% |
!! | AGCAAATTTGAAACATGATT+AGG | - | chr4.3:34231391-34231410 | MS.gene50738:intron | 25.0% |
!! | ATGCTAACTTGTAATATTTG+GGG | - | chr4.3:34231485-34231504 | MS.gene50738:intron | 25.0% |
!! | TATTATAGTGGAGATTTAAG+AGG | - | chr4.3:34230354-34230373 | MS.gene50738:intron | 25.0% |
!! | TATTTTTCCTTTTTGCCTTT+CGG | + | chr4.3:34229898-34229917 | None:intergenic | 25.0% |
!!! | TTATCTAAATTGGTTTGGAT+TGG | - | chr4.3:34231535-34231554 | MS.gene50738:intron | 25.0% |
!!! | TTTTGAAGAAATATTCTCAC+CGG | - | chr4.3:34229165-34229184 | MS.gene50738:CDS | 25.0% |
AAAATTACCAGATGGAAAGA+GGG | - | chr4.3:34229033-34229052 | MS.gene50738:intron | 30.0% | |
AATCATCTTCCAAACATCAA+GGG | - | chr4.3:34227840-34227859 | MS.gene50738:CDS | 30.0% | |
ACTATTGTGGTAAACAATTC+AGG | - | chr4.3:34228668-34228687 | MS.gene50738:intron | 30.0% | |
AGTTACTGCTGTTAAAAATC+AGG | - | chr4.3:34230886-34230905 | MS.gene50738:CDS | 30.0% | |
ATCTCAAGAAAGTTCTTGAA+AGG | - | chr4.3:34229251-34229270 | MS.gene50738:CDS | 30.0% | |
ATGGATACTACAAAATATGC+AGG | - | chr4.3:34232113-34232132 | MS.gene50738:CDS | 30.0% | |
ATGTAAACTTCACTGAGAAA+GGG | - | chr4.3:34228900-34228919 | MS.gene50738:intron | 30.0% | |
ATGTGAGTAAGTAAAAACCA+CGG | + | chr4.3:34230390-34230409 | None:intergenic | 30.0% | |
ATGTTTGTTCTACATCTGAA+AGG | - | chr4.3:34227976-34227995 | MS.gene50738:intron | 30.0% | |
CAAAATGCAAATTGCATTTG+CGG | - | chr4.3:34230025-34230044 | MS.gene50738:intron | 30.0% | |
CCAATAAAGAAAAATGGTTG+CGG | - | chr4.3:34228957-34228976 | MS.gene50738:intron | 30.0% | |
CTATTGTGGTAAACAATTCA+GGG | - | chr4.3:34228669-34228688 | MS.gene50738:intron | 30.0% | |
TAAAATTACCAGATGGAAAG+AGG | - | chr4.3:34229032-34229051 | MS.gene50738:intron | 30.0% | |
TAGATACAACTCTCACAAAT+TGG | + | chr4.3:34230278-34230297 | None:intergenic | 30.0% | |
TATATGCAAACATACATTGG+AGG | - | chr4.3:34231944-34231963 | MS.gene50738:intron | 30.0% | |
TATGGTCATTTGAGAAACTT+TGG | - | chr4.3:34228443-34228462 | MS.gene50738:intron | 30.0% | |
TATGTAAACTTCACTGAGAA+AGG | - | chr4.3:34228899-34228918 | MS.gene50738:intron | 30.0% | |
TATTCCATGAGATCTACAAT+AGG | + | chr4.3:34228198-34228217 | None:intergenic | 30.0% | |
TATTGTGGTAAACAATTCAG+GGG | - | chr4.3:34228670-34228689 | MS.gene50738:intron | 30.0% | |
TCACGATCATAATTCATTTG+AGG | + | chr4.3:34228704-34228723 | None:intergenic | 30.0% | |
TGGATACTACAAAATATGCA+GGG | - | chr4.3:34232114-34232133 | MS.gene50738:CDS | 30.0% | |
TTACTAAGTTTCATATGACC+AGG | + | chr4.3:34229316-34229335 | None:intergenic | 30.0% | |
TTCATCATCATCACTGATAA+AGG | - | chr4.3:34229640-34229659 | MS.gene50738:intron | 30.0% | |
TTGTTTACCACAATAGTCTT+TGG | + | chr4.3:34228665-34228684 | None:intergenic | 30.0% | |
TTTACTTACTCACATTGAGA+AGG | - | chr4.3:34230395-34230414 | MS.gene50738:intron | 30.0% | |
! | AAACTTCCCAAATCATTTTG+GGG | - | chr4.3:34228320-34228339 | MS.gene50738:intron | 30.0% |
! | ATGATGATGAATTTCGAACT+AGG | + | chr4.3:34229631-34229650 | None:intergenic | 30.0% |
! | CAAAACTTCCCAAATCATTT+TGG | - | chr4.3:34228318-34228337 | MS.gene50738:intron | 30.0% |
! | GCATTTTGTCTTTTCCTTTT+TGG | + | chr4.3:34230013-34230032 | None:intergenic | 30.0% |
! | TTCTTTATTGGTTGTCTCTA+TGG | + | chr4.3:34228948-34228967 | None:intergenic | 30.0% |
!! | ATGAACTTGGCTTTAGATTA+TGG | - | chr4.3:34228555-34228574 | MS.gene50738:intron | 30.0% |
!! | CAGAGTATCTTTTCAAAGAT+CGG | - | chr4.3:34227908-34227927 | MS.gene50738:CDS | 30.0% |
!! | TGAACTTGGCTTTAGATTAT+GGG | - | chr4.3:34228556-34228575 | MS.gene50738:intron | 30.0% |
!!! | AGTACATTTTAAAATCCGGT+GGG | - | chr4.3:34231643-34231662 | MS.gene50738:intron | 30.0% |
AATGAATATCAAATGCTCGC+TGG | - | chr4.3:34229565-34229584 | MS.gene50738:intron | 35.0% | |
ACAATTCGTGCTTTGTATCT+GGG | + | chr4.3:34229112-34229131 | None:intergenic | 35.0% | |
ACTCAAAATAGGCACTTTAG+CGG | + | chr4.3:34230461-34230480 | None:intergenic | 35.0% | |
ACTTGATCTTTCGTCTTCAA+TGG | + | chr4.3:34228068-34228087 | None:intergenic | 35.0% | |
AGAAGATTCAATAATCCGAC+AGG | - | chr4.3:34230538-34230557 | MS.gene50738:CDS | 35.0% | |
AGATTATCTGTCGGAAGAAT+CGG | + | chr4.3:34230833-34230852 | None:intergenic | 35.0% | |
AGTCTCTTTGAGCATATGTA+TGG | + | chr4.3:34231980-34231999 | None:intergenic | 35.0% | |
AGTTTCATATGACCAGGTAA+CGG | + | chr4.3:34229310-34229329 | None:intergenic | 35.0% | |
ATACCAGATGAAGTATGGTA+TGG | - | chr4.3:34228407-34228426 | MS.gene50738:intron | 35.0% | |
ATCTACAATAGGCTGCAAAT+GGG | + | chr4.3:34228187-34228206 | None:intergenic | 35.0% | |
ATGCAGGGAAAGATAAACAA+GGG | - | chr4.3:34227726-34227745 | MS.gene50738:CDS | 35.0% | |
ATTGTATGAGGTTCGACTTA+AGG | - | chr4.3:34231307-34231326 | MS.gene50738:intron | 35.0% | |
ATTGTGGTAAACAATTCAGG+GGG | - | chr4.3:34228671-34228690 | MS.gene50738:intron | 35.0% | |
ATTTGAGAAACTTTGGATGC+AGG | - | chr4.3:34228450-34228469 | MS.gene50738:intron | 35.0% | |
CTACTGAGTAGTAGTATGAA+CGG | + | chr4.3:34232185-34232204 | None:intergenic | 35.0% | |
GAACTAGGATATCTCACATA+TGG | + | chr4.3:34229616-34229635 | None:intergenic | 35.0% | |
GAATACAAATCTTCACCATC+AGG | + | chr4.3:34230327-34230346 | None:intergenic | 35.0% | |
GAATCATCTTCCAAACATCA+AGG | - | chr4.3:34227839-34227858 | MS.gene50738:CDS | 35.0% | |
GGATACTACAAAATATGCAG+GGG | - | chr4.3:34232115-34232134 | MS.gene50738:CDS | 35.0% | |
GGGTTTGTGATCATGAATTA+GGG | - | chr4.3:34230989-34231008 | MS.gene50738:CDS | 35.0% | |
GGTACAAGTATAATTGTGTG+CGG | - | chr4.3:34229763-34229782 | MS.gene50738:intron | 35.0% | |
GTCTCTTTGAGCATATGTAT+GGG | + | chr4.3:34231979-34231998 | None:intergenic | 35.0% | |
GTTTCTCAAATGACCATATG+AGG | + | chr4.3:34228441-34228460 | None:intergenic | 35.0% | |
TAAGAAGCCAAAGACTATTG+TGG | - | chr4.3:34228655-34228674 | MS.gene50738:intron | 35.0% | |
TATGCAGGGAAAGATAAACA+AGG | - | chr4.3:34227725-34227744 | MS.gene50738:CDS | 35.0% | |
TATGGAAAGAAAGCCTCATA+TGG | - | chr4.3:34228425-34228444 | MS.gene50738:intron | 35.0% | |
TCAATTGATGCTTCTTAGCA+CGG | + | chr4.3:34230694-34230713 | None:intergenic | 35.0% | |
TCTCCATTTAAAGGTCTTGA+AGG | + | chr4.3:34228386-34228405 | None:intergenic | 35.0% | |
TCTCCTTCAAGACCTTTAAA+TGG | - | chr4.3:34228380-34228399 | MS.gene50738:intron | 35.0% | |
TCTGGTATCTCTCCATTTAA+AGG | + | chr4.3:34228395-34228414 | None:intergenic | 35.0% | |
TGACTTTCTCTACAATCGTT+CGG | + | chr4.3:34228280-34228299 | None:intergenic | 35.0% | |
TGGGTTTGTGATCATGAATT+AGG | - | chr4.3:34230988-34231007 | MS.gene50738:CDS | 35.0% | |
TGTAAACTTCACTGAGAAAG+GGG | - | chr4.3:34228901-34228920 | MS.gene50738:intron | 35.0% | |
TGTGAGTAAGTAAAAACCAC+GGG | + | chr4.3:34230389-34230408 | None:intergenic | 35.0% | |
TGTTTAAGAACAGACAATGG+TGG | - | chr4.3:34228149-34228168 | MS.gene50738:CDS | 35.0% | |
TGTTTCAATTGTGCTGAAAC+TGG | + | chr4.3:34230108-34230127 | None:intergenic | 35.0% | |
TTTCCATACCATACTTCATC+TGG | + | chr4.3:34228413-34228432 | None:intergenic | 35.0% | |
TTTGAGAAACTTTGGATGCA+GGG | - | chr4.3:34228451-34228470 | MS.gene50738:intron | 35.0% | |
! | AAATGGATACTGAGGTATCT+AGG | - | chr4.3:34229511-34229530 | MS.gene50738:intron | 35.0% |
! | AATCACTGCCTTTCTTTTGA+TGG | + | chr4.3:34229147-34229166 | None:intergenic | 35.0% |
! | AGATGATGATGATGTTGAGA+TGG | - | chr4.3:34228808-34228827 | MS.gene50738:CDS | 35.0% |
! | AGCTTTGCTCTTTCATCTTT+TGG | + | chr4.3:34228491-34228510 | None:intergenic | 35.0% |
! | CTTCTTGCATTGCTTGATTT+TGG | + | chr4.3:34228772-34228791 | None:intergenic | 35.0% |
! | GCCAAAACATAAGCACTTTT+TGG | + | chr4.3:34229545-34229564 | None:intergenic | 35.0% |
! | GTTCTTTTACTGGGTTTGAT+AGG | + | chr4.3:34229477-34229496 | None:intergenic | 35.0% |
! | TTCCATCTGGTAATTTTACC+AGG | + | chr4.3:34229030-34229049 | None:intergenic | 35.0% |
!! | AAAGTATTGTGAACCACCAA+GGG | + | chr4.3:34228003-34228022 | None:intergenic | 35.0% |
!! | AGAGGGCATTGAAAAATAAG+TGG | - | chr4.3:34229050-34229069 | MS.gene50738:intron | 35.0% |
!! | CCGCAACCATTTTTCTTTAT+TGG | + | chr4.3:34228960-34228979 | None:intergenic | 35.0% |
!! | GAGGGCATTGAAAAATAAGT+GGG | - | chr4.3:34229051-34229070 | MS.gene50738:intron | 35.0% |
!! | TGCTAAGAAGCATCAATTGA+TGG | - | chr4.3:34230694-34230713 | MS.gene50738:intron | 35.0% |
!!! | AAGTGCCTATTTTGAGTTCA+CGG | - | chr4.3:34230464-34230483 | MS.gene50738:CDS | 35.0% |
!!! | GAGTACATTTTAAAATCCGG+TGG | - | chr4.3:34231642-34231661 | MS.gene50738:intron | 35.0% |
!!! | GATTTTGATTGGAGAGAGAA+AGG | - | chr4.3:34230860-34230879 | MS.gene50738:CDS | 35.0% |
!!! | GCCAAAAAGTGCTTATGTTT+TGG | - | chr4.3:34229541-34229560 | MS.gene50738:intron | 35.0% |
!!! | GTACATTTTAAAATCCGGTG+GGG | - | chr4.3:34231644-34231663 | MS.gene50738:intron | 35.0% |
!!! | TGATTTTGGTTTGTCTGATC+AGG | + | chr4.3:34228758-34228777 | None:intergenic | 35.0% |
AAAGCACGAATTGTCGTGAA+GGG | - | chr4.3:34229118-34229137 | MS.gene50738:CDS | 40.0% | |
AAAGCTAGATGCTAAGACGA+AGG | - | chr4.3:34228505-34228524 | MS.gene50738:intron | 40.0% | |
AACAGAACCCAATCAAATGG+AGG | - | chr4.3:34228730-34228749 | MS.gene50738:intron | 40.0% | |
AAGACATGAGCAAAGAACTG+TGG | - | chr4.3:34227766-34227785 | MS.gene50738:CDS | 40.0% | |
AATCGTTCGGTTCATCCTTT+CGG | + | chr4.3:34228267-34228286 | None:intergenic | 40.0% | |
ACATAGTTATGTCCACCTGA+TGG | - | chr4.3:34230309-34230328 | MS.gene50738:intron | 40.0% | |
ACCGTTCTTGACAAGATTAG+CGG | + | chr4.3:34231793-34231812 | None:intergenic | 40.0% | |
AGAGAAAGAAGAGATGAGCA+AGG | - | chr4.3:34229360-34229379 | MS.gene50738:intron | 40.0% | |
AGATTCAATAATCCGACAGG+TGG | - | chr4.3:34230541-34230560 | MS.gene50738:CDS | 40.0% | |
AGATTGCATCTCTTCTTCCA+TGG | + | chr4.3:34228984-34229003 | None:intergenic | 40.0% | |
AGCAATGCAAGAAGAACAGA+TGG | - | chr4.3:34228778-34228797 | MS.gene50738:CDS | 40.0% | |
ATCGTTCGAGAAGAATGTTG+TGG | - | chr4.3:34229212-34229231 | MS.gene50738:CDS | 40.0% | |
ATGAATGTCATCTTCACCAC+CGG | + | chr4.3:34229187-34229206 | None:intergenic | 40.0% | |
ATTATCTGTCGGAAGAATCG+GGG | + | chr4.3:34230831-34230850 | None:intergenic | 40.0% | |
ATTGAATCTTCTCCGTCATC+CGG | + | chr4.3:34230530-34230549 | None:intergenic | 40.0% | |
ATTGCTCGTGGTAAAAACGA+AGG | - | chr4.3:34227690-34227709 | MS.gene50738:CDS | 40.0% | |
CAAACCCAGTAAAAGAACAC+TGG | - | chr4.3:34229479-34229498 | MS.gene50738:intron | 40.0% | |
CAACATGACAGCTTCCAAAA+AGG | - | chr4.3:34229996-34230015 | MS.gene50738:intron | 40.0% | |
CAATTCGTGCTTTGTATCTG+GGG | + | chr4.3:34229111-34229130 | None:intergenic | 40.0% | |
CATCTGAATGAACAAGATCG+AGG | + | chr4.3:34227959-34227978 | None:intergenic | 40.0% | |
CCAAGGATGAACATGATTAC+AGG | - | chr4.3:34230642-34230661 | MS.gene50738:CDS | 40.0% | |
CCTGTAATCATGTTCATCCT+TGG | + | chr4.3:34230645-34230664 | None:intergenic | 40.0% | |
CTAAAGCCAAGTTCATCTCT+TGG | + | chr4.3:34228551-34228570 | None:intergenic | 40.0% | |
CTATTCGCCTATTAGGATGA+AGG | - | chr4.3:34232039-34232058 | MS.gene50738:CDS | 40.0% | |
CTCGTTGATCTTCTCAATTG+AGG | + | chr4.3:34228842-34228861 | None:intergenic | 40.0% | |
CTTCATCCTAATAGGCGAAT+AGG | + | chr4.3:34232041-34232060 | None:intergenic | 40.0% | |
CTTTAGCACTTACTAGCAAG+AGG | + | chr4.3:34231816-34231835 | None:intergenic | 40.0% | |
GACAATTCGTGCTTTGTATC+TGG | + | chr4.3:34229113-34229132 | None:intergenic | 40.0% | |
GACCTGGTAAAATTACCAGA+TGG | - | chr4.3:34229025-34229044 | MS.gene50738:intron | 40.0% | |
GACGAAAGATCAAGTTCTTC+AGG | - | chr4.3:34228073-34228092 | MS.gene50738:CDS | 40.0% | |
GAGAGATACCAGATGAAGTA+TGG | - | chr4.3:34228402-34228421 | MS.gene50738:intron | 40.0% | |
GATCTACAATAGGCTGCAAA+TGG | + | chr4.3:34228188-34228207 | None:intergenic | 40.0% | |
GATGAGTATGATGAATTGCG+AGG | - | chr4.3:34229808-34229827 | MS.gene50738:intron | 40.0% | |
GATTATCTGTCGGAAGAATC+GGG | + | chr4.3:34230832-34230851 | None:intergenic | 40.0% | |
GCTAACAGAACCCAATCAAA+TGG | - | chr4.3:34228727-34228746 | MS.gene50738:intron | 40.0% | |
GCTTCACCCCAAAATGATTT+GGG | + | chr4.3:34228329-34228348 | None:intergenic | 40.0% | |
GCTTCACGTGAAGTTTCATA+AGG | + | chr4.3:34229935-34229954 | None:intergenic | 40.0% | |
GCTTCTTAGATTGAATGTCG+TGG | + | chr4.3:34228643-34228662 | None:intergenic | 40.0% | |
GTGAAGTTTCATAAGGCAAG+TGG | + | chr4.3:34229928-34229947 | None:intergenic | 40.0% | |
TACAAATCTTCACCATCAGG+TGG | + | chr4.3:34230324-34230343 | None:intergenic | 40.0% | |
TCTCTCCAATCAAAATCCTC+CGG | + | chr4.3:34230857-34230876 | None:intergenic | 40.0% | |
TCTTCCGACAGATAATCTTC+CGG | - | chr4.3:34230835-34230854 | MS.gene50738:CDS | 40.0% | |
TCTTTCTCTTGGTCATTCTC+AGG | + | chr4.3:34229349-34229368 | None:intergenic | 40.0% | |
TGAAGAAATATTCTCACCGG+TGG | - | chr4.3:34229168-34229187 | MS.gene50738:CDS | 40.0% | |
TGCTCAAAGAGACTAGATCA+TGG | - | chr4.3:34231986-34232005 | MS.gene50738:intron | 40.0% | |
TGCTCATCTCTTCTTTCTCT+TGG | + | chr4.3:34229360-34229379 | None:intergenic | 40.0% | |
TGCTTCACCCCAAAATGATT+TGG | + | chr4.3:34228330-34228349 | None:intergenic | 40.0% | |
TGGGAAGGTTTATTCTTCCA+AGG | - | chr4.3:34230625-34230644 | MS.gene50738:CDS | 40.0% | |
TGTTGGAGTTTCAGTACAAC+CGG | - | chr4.3:34231025-34231044 | MS.gene50738:CDS | 40.0% | |
! | ACGATCACTCTAGAAAAGTG+TGG | - | chr4.3:34228036-34228055 | MS.gene50738:intron | 40.0% |
! | ACTAGATCATGGAGTGTTAC+TGG | - | chr4.3:34231997-34232016 | MS.gene50738:intron | 40.0% |
! | ACTTGTCGATTGTGATCATG+AGG | - | chr4.3:34231108-34231127 | MS.gene50738:intron | 40.0% |
! | ATAGTTTTCCTTTGGCTGGA+GGG | - | chr4.3:34229831-34229850 | MS.gene50738:intron | 40.0% |
! | ATTTTACCAGGTCATACGTC+TGG | + | chr4.3:34229018-34229037 | None:intergenic | 40.0% |
! | CACTCCAGTGTTCTTTTACT+GGG | + | chr4.3:34229486-34229505 | None:intergenic | 40.0% |
! | CGATCACTCTAGAAAAGTGT+GGG | - | chr4.3:34228037-34228056 | MS.gene50738:intron | 40.0% |
! | GACAATGGTGGAGAGTATAT+AGG | - | chr4.3:34228161-34228180 | MS.gene50738:CDS | 40.0% |
! | GCATCAATTGATGGATCCTT+CGG | - | chr4.3:34230703-34230722 | MS.gene50738:intron | 40.0% |
! | GCTAAGACTGACAAGTTTTC+CGG | + | chr4.3:34231080-34231099 | None:intergenic | 40.0% |
! | GTTGTTGTTGTTGTGCAAGT+TGG | + | chr4.3:34229980-34229999 | None:intergenic | 40.0% |
! | TCTAGAGTGATCGTCAATGA+AGG | + | chr4.3:34228030-34228049 | None:intergenic | 40.0% |
! | TTGCGAGGATAGTTTTCCTT+TGG | - | chr4.3:34229823-34229842 | MS.gene50738:intron | 40.0% |
! | TTTTCTCTCACACTCTTACG+AGG | + | chr4.3:34230245-34230264 | None:intergenic | 40.0% |
!! | ATCTTCCGGAGGATTTTGAT+TGG | - | chr4.3:34230849-34230868 | MS.gene50738:CDS | 40.0% |
!! | CAAAGTATTGTGAACCACCA+AGG | + | chr4.3:34228004-34228023 | None:intergenic | 40.0% |
!!! | CACACAACAAGTTTTTAGCG+TGG | + | chr4.3:34230425-34230444 | None:intergenic | 40.0% |
!!! | TATTTTGAGTTCACGGAGGA+GGG | - | chr4.3:34230471-34230490 | MS.gene50738:CDS | 40.0% |
AAAACTCATGGGGTGAGACT+TGG | - | chr4.3:34232083-34232102 | MS.gene50738:CDS | 45.0% | |
AAACATCAAGGGTCAACCAC+TGG | - | chr4.3:34227851-34227870 | MS.gene50738:CDS | 45.0% | |
AAACTCATGGGGTGAGACTT+GGG | - | chr4.3:34232084-34232103 | MS.gene50738:CDS | 45.0% | |
AAACTCCCTCGGAGTAAGAT+CGG | + | chr4.3:34230753-34230772 | None:intergenic | 45.0% | |
AACTTCACGTGAAGCAGCAA+AGG | - | chr4.3:34229940-34229959 | MS.gene50738:intron | 45.0% | |
AAGCACGAATTGTCGTGAAG+GGG | - | chr4.3:34229119-34229138 | MS.gene50738:CDS | 45.0% | |
AATTCCATGCCTCCGTAGAA+CGG | - | chr4.3:34228105-34228124 | MS.gene50738:CDS | 45.0% | |
AATTCTCCGATCTTACTCCG+AGG | - | chr4.3:34230744-34230763 | MS.gene50738:intron | 45.0% | |
AGAAAAATGGTTGCGGTCCA+TGG | - | chr4.3:34228964-34228983 | MS.gene50738:intron | 45.0% | |
AGATGAATGGAGTAGCCGAA+AGG | - | chr4.3:34228249-34228268 | MS.gene50738:CDS | 45.0% | |
AGGCTCTCTGTATGTTATGC+AGG | - | chr4.3:34227710-34227729 | MS.gene50738:CDS | 45.0% | |
AGTGGTTGACCCTTGATGTT+TGG | + | chr4.3:34227852-34227871 | None:intergenic | 45.0% | |
ATAGTGTGATCCAGAGCAAC+CGG | - | chr4.3:34231572-34231591 | MS.gene50738:intron | 45.0% | |
ATCAGGCTCCTCCATTTGAT+TGG | + | chr4.3:34228741-34228760 | None:intergenic | 45.0% | |
ATCATGAATTAGGGCTCGTG+TGG | - | chr4.3:34230998-34231017 | MS.gene50738:CDS | 45.0% | |
ATGAAAGAGCTTCCGCTTGA+GGG | - | chr4.3:34229786-34229805 | MS.gene50738:intron | 45.0% | |
ATGGCTTCCATGAAGCTTTG+AGG | + | chr4.3:34228929-34228948 | None:intergenic | 45.0% | |
ATTCTCCGATCTTACTCCGA+GGG | - | chr4.3:34230745-34230764 | MS.gene50738:intron | 45.0% | |
CAAAGCACGAATTGTCGTGA+AGG | - | chr4.3:34229117-34229136 | MS.gene50738:CDS | 45.0% | |
CAATCTTCACAGGATTCCAG+TGG | + | chr4.3:34227870-34227889 | None:intergenic | 45.0% | |
CATCATACTCATCCCTCAAG+CGG | + | chr4.3:34229801-34229820 | None:intergenic | 45.0% | |
CCACATGAGCGAGAAAAGTT+TGG | - | chr4.3:34227803-34227822 | MS.gene50738:CDS | 45.0% | |
CCACGATCAGTACCAGAATA+AGG | + | chr4.3:34231690-34231709 | None:intergenic | 45.0% | |
CCATCAAGCAGATACTTCTC+AGG | - | chr4.3:34228872-34228891 | MS.gene50738:intron | 45.0% | |
CCATTCATCTGAGGAGTCTT+GGG | + | chr4.3:34228239-34228258 | None:intergenic | 45.0% | |
CGAACCATCTTCTTAGTAGC+AGG | + | chr4.3:34228584-34228603 | None:intergenic | 45.0% | |
CTACCCACAGCTGAAGAATA+GGG | + | chr4.3:34229388-34229407 | None:intergenic | 45.0% | |
CTCCTCCGTGAACTCAAAAT+AGG | + | chr4.3:34230472-34230491 | None:intergenic | 45.0% | |
GCAGCCTATTGTAGATCTCA+TGG | - | chr4.3:34228191-34228210 | MS.gene50738:CDS | 45.0% | |
GCCGCTAATCTTGTCAAGAA+CGG | - | chr4.3:34231789-34231808 | MS.gene50738:intron | 45.0% | |
GGATCCTGCTACTAAGAAGA+TGG | - | chr4.3:34228577-34228596 | MS.gene50738:intron | 45.0% | |
GGATGAAGGAGAAGCCATAT+TGG | - | chr4.3:34232053-34232072 | MS.gene50738:CDS | 45.0% | |
GGCTCTCTGTATGTTATGCA+GGG | - | chr4.3:34227711-34227730 | MS.gene50738:CDS | 45.0% | |
GGCTTCTCCTTCATCCTAAT+AGG | + | chr4.3:34232049-34232068 | None:intergenic | 45.0% | |
GGTTCACCAAGAGATGAACT+TGG | - | chr4.3:34228542-34228561 | MS.gene50738:intron | 45.0% | |
GTGCTGTGAAATGGATACTG+AGG | - | chr4.3:34229503-34229522 | MS.gene50738:intron | 45.0% | |
GTGGAGATTTAAGAGGCCTA+CGG | - | chr4.3:34230361-34230380 | MS.gene50738:intron | 45.0% | |
GTTCATCTCTTGGTGAACCA+AGG | + | chr4.3:34228541-34228560 | None:intergenic | 45.0% | |
TCAAATGCTCGCTGGATATG+TGG | - | chr4.3:34229573-34229592 | MS.gene50738:intron | 45.0% | |
TCACTGATAAAGGAGAGTCC+TGG | - | chr4.3:34229650-34229669 | MS.gene50738:intron | 45.0% | |
TCAGGCTCCTCCATTTGATT+GGG | + | chr4.3:34228740-34228759 | None:intergenic | 45.0% | |
TCCATTCATCTGAGGAGTCT+TGG | + | chr4.3:34228240-34228259 | None:intergenic | 45.0% | |
TCCTCCGGAAGATTATCTGT+CGG | + | chr4.3:34230842-34230861 | None:intergenic | 45.0% | |
TCCTGTGAAGATTGTCTAGC+AGG | - | chr4.3:34227876-34227895 | MS.gene50738:CDS | 45.0% | |
TCGAAAGTCCTCCTGACTAA+GGG | - | chr4.3:34229703-34229722 | MS.gene50738:intron | 45.0% | |
TCTACATCTGAAAGGTCCCT+TGG | - | chr4.3:34227984-34228003 | MS.gene50738:intron | 45.0% | |
TCTCACATCTCTGTGTGTTG+TGG | + | chr4.3:34230131-34230150 | None:intergenic | 45.0% | |
TCTTCCAGTTGTCCGTTCTA+CGG | + | chr4.3:34228120-34228139 | None:intergenic | 45.0% | |
TCTTCTCACAACTCTGTGTG+AGG | + | chr4.3:34230201-34230220 | None:intergenic | 45.0% | |
TGACAAGATTAGCGGCAATC+TGG | + | chr4.3:34231785-34231804 | None:intergenic | 45.0% | |
TGCAGGGGACGAAATATATG+CGG | - | chr4.3:34232130-34232149 | MS.gene50738:CDS | 45.0% | |
TGGAGATTTAAGAGGCCTAC+GGG | - | chr4.3:34230362-34230381 | MS.gene50738:intron | 45.0% | |
TTACTGGTGGGATATGGATC+TGG | - | chr4.3:34232013-34232032 | MS.gene50738:intron | 45.0% | |
TTCAATGCCCTCTTTCCATC+TGG | + | chr4.3:34229043-34229062 | None:intergenic | 45.0% | |
TTTCCCAACATTCTCTACGC+CGG | - | chr4.3:34230508-34230527 | MS.gene50738:CDS | 45.0% | |
! | ACGAAGGAGTGCATATACCT+TGG | - | chr4.3:34228521-34228540 | MS.gene50738:intron | 45.0% |
! | AGATCATGGAGTGTTACTGG+TGG | - | chr4.3:34232000-34232019 | MS.gene50738:intron | 45.0% |
! | CCAAACTTTTCTCGCTCATG+TGG | + | chr4.3:34227806-34227825 | None:intergenic | 45.0% |
! | GAGGATAGTTTTCCTTTGGC+TGG | - | chr4.3:34229827-34229846 | MS.gene50738:intron | 45.0% |
! | GATAGTTTTCCTTTGGCTGG+AGG | - | chr4.3:34229830-34229849 | MS.gene50738:intron | 45.0% |
! | GATCATGGAGTGTTACTGGT+GGG | - | chr4.3:34232001-34232020 | MS.gene50738:intron | 45.0% |
! | GCACATCGATAGTGACTTGT+AGG | - | chr4.3:34231343-34231362 | MS.gene50738:intron | 45.0% |
! | GCACTCCAGTGTTCTTTTAC+TGG | + | chr4.3:34229487-34229506 | None:intergenic | 45.0% |
! | GGAACTTTTCTCCACATGGT+GGG | + | chr4.3:34229873-34229892 | None:intergenic | 45.0% |
! | GTGCTTTGTATCTGGGGTTT+GGG | + | chr4.3:34229105-34229124 | None:intergenic | 45.0% |
! | TAGTTTTCCTTTGGCTGGAG+GGG | - | chr4.3:34229832-34229851 | MS.gene50738:intron | 45.0% |
! | TCAATTGATGGATCCTTCGG+CGG | - | chr4.3:34230706-34230725 | MS.gene50738:intron | 45.0% |
! | TGGAACTTTTCTCCACATGG+TGG | + | chr4.3:34229874-34229893 | None:intergenic | 45.0% |
! | TGGATACTGAGGTATCTAGG+AGG | - | chr4.3:34229514-34229533 | MS.gene50738:intron | 45.0% |
! | TTTCCTTTTTGCCTTTCGGC+TGG | + | chr4.3:34229894-34229913 | None:intergenic | 45.0% |
!! | AACACTGGAGTGCTGTGAAA+TGG | - | chr4.3:34229494-34229513 | MS.gene50738:intron | 45.0% |
!! | AAGGGGTGCCATCAAAAGAA+AGG | - | chr4.3:34229136-34229155 | MS.gene50738:CDS | 45.0% |
!! | CCTGAGAAGTATCTGCTTGA+TGG | + | chr4.3:34228875-34228894 | None:intergenic | 45.0% |
!! | CCTTATTCTGGTACTGATCG+TGG | - | chr4.3:34231687-34231706 | MS.gene50738:intron | 45.0% |
!! | GAGTTTCGTCAGAGCGTTTT+GGG | - | chr4.3:34230767-34230786 | MS.gene50738:intron | 45.0% |
!!! | AGAGCGTTTTGGGATTGAGA+GGG | - | chr4.3:34230777-34230796 | MS.gene50738:intron | 45.0% |
!!! | CTATTTTGAGTTCACGGAGG+AGG | - | chr4.3:34230470-34230489 | MS.gene50738:CDS | 45.0% |
!!! | TGCCTATTTTGAGTTCACGG+AGG | - | chr4.3:34230467-34230486 | MS.gene50738:CDS | 45.0% |
AACTCATGGGGTGAGACTTG+GGG | - | chr4.3:34232085-34232104 | MS.gene50738:CDS | 50.0% | |
ACATCTGAAAGGTCCCTTGG+TGG | - | chr4.3:34227987-34228006 | MS.gene50738:intron | 50.0% | |
ACATTCTCTACGCCGGATGA+CGG | - | chr4.3:34230515-34230534 | MS.gene50738:CDS | 50.0% | |
ACGGAGGAGGGAAATTATGC+AGG | - | chr4.3:34230483-34230502 | MS.gene50738:CDS | 50.0% | |
AGAGAACCAGACGTATGACC+TGG | - | chr4.3:34229009-34229028 | MS.gene50738:CDS | 50.0% | |
AGGGGAACCTCAAAGCTTCA+TGG | - | chr4.3:34228919-34228938 | MS.gene50738:intron | 50.0% | |
AGTACAACCGGTGCACTTGA+AGG | - | chr4.3:34231037-34231056 | MS.gene50738:intron | 50.0% | |
CAACTCTCTTCGTGAGAGTG+AGG | + | chr4.3:34230166-34230185 | None:intergenic | 50.0% | |
CATCCGGCGTAGAGAATGTT+GGG | + | chr4.3:34230514-34230533 | None:intergenic | 50.0% | |
CCCAAGACTCCTCAGATGAA+TGG | - | chr4.3:34228236-34228255 | MS.gene50738:CDS | 50.0% | |
CCTACAGCATAACCGATGTC+TGG | + | chr4.3:34229439-34229458 | None:intergenic | 50.0% | |
CTGGAGCCTATTCGCCTATT+AGG | - | chr4.3:34232032-34232051 | MS.gene50738:CDS | 50.0% | |
GAACTGTGGCACAAACGACT+TGG | - | chr4.3:34227780-34227799 | MS.gene50738:CDS | 50.0% | |
GATGAAAGAGCTTCCGCTTG+AGG | - | chr4.3:34229785-34229804 | MS.gene50738:intron | 50.0% | |
GCCTGCTAGACAATCTTCAC+AGG | + | chr4.3:34227880-34227899 | None:intergenic | 50.0% | |
GCTACCCACAGCTGAAGAAT+AGG | + | chr4.3:34229389-34229408 | None:intergenic | 50.0% | |
GGACTCCATGGTTTCTACTG+TGG | - | chr4.3:34232156-34232175 | MS.gene50738:CDS | 50.0% | |
GGAGAAAAGTTCCAGCCGAA+AGG | - | chr4.3:34229880-34229899 | MS.gene50738:intron | 50.0% | |
GGGACGAAATATATGCGGAG+TGG | - | chr4.3:34232135-34232154 | MS.gene50738:CDS | 50.0% | |
GGGGCTGCATTTGCATCTTT+CGG | + | chr4.3:34230812-34230831 | None:intergenic | 50.0% | |
GGTGAGACTTGGGGAGAAAA+TGG | - | chr4.3:34232094-34232113 | MS.gene50738:CDS | 50.0% | |
GGTTCCGTTGAATGCGACAA+CGG | - | chr4.3:34229739-34229758 | MS.gene50738:intron | 50.0% | |
GGTTTGACGAAAGGTTCGAC+CGG | - | chr4.3:34229671-34229690 | MS.gene50738:intron | 50.0% | |
GTCGAAAGTCCTCCTGACTA+AGG | - | chr4.3:34229702-34229721 | MS.gene50738:intron | 50.0% | |
GTCGAACCTTTCGTCAAACC+AGG | + | chr4.3:34229671-34229690 | None:intergenic | 50.0% | |
GTGCCCTATTCTTCAGCTGT+GGG | - | chr4.3:34229382-34229401 | MS.gene50738:intron | 50.0% | |
GTTCCAGCCGAAAGGCAAAA+AGG | - | chr4.3:34229888-34229907 | MS.gene50738:intron | 50.0% | |
TAGTGTGATCCAGAGCAACC+GGG | - | chr4.3:34231573-34231592 | MS.gene50738:intron | 50.0% | |
TCAGGAGGACTTTCGACACA+AGG | + | chr4.3:34229699-34229718 | None:intergenic | 50.0% | |
TCATCCGGCGTAGAGAATGT+TGG | + | chr4.3:34230515-34230534 | None:intergenic | 50.0% | |
TCCGACAGATAATCTTCCGG+AGG | - | chr4.3:34230838-34230857 | MS.gene50738:CDS | 50.0% | |
TCGGCTACTCCATTCATCTG+AGG | + | chr4.3:34228248-34228267 | None:intergenic | 50.0% | |
TGCAGACCATGGCGTACATA+AGG | + | chr4.3:34229411-34229430 | None:intergenic | 50.0% | |
TGGTCGACGATGAAGAAGTG+CGG | - | chr4.3:34230561-34230580 | MS.gene50738:CDS | 50.0% | |
TTCATCTGAGGAGTCTTGGG+AGG | + | chr4.3:34228236-34228255 | None:intergenic | 50.0% | |
! | AGTTTTCCTTTGGCTGGAGG+GGG | - | chr4.3:34229833-34229852 | MS.gene50738:intron | 50.0% |
! | CCAGACATCGGTTATGCTGT+AGG | - | chr4.3:34229436-34229455 | MS.gene50738:intron | 50.0% |
! | CGTGCTTTGTATCTGGGGTT+TGG | + | chr4.3:34229106-34229125 | None:intergenic | 50.0% |
! | GACGATGAAGAAGTGCGGTT+GGG | - | chr4.3:34230566-34230585 | MS.gene50738:CDS | 50.0% |
! | GAGAGTCCTGGTTTGACGAA+AGG | - | chr4.3:34229662-34229681 | MS.gene50738:intron | 50.0% |
! | GGAGTGTTACTGGTGGGATA+TGG | - | chr4.3:34232007-34232026 | MS.gene50738:intron | 50.0% |
! | GGCTGGAACTTTTCTCCACA+TGG | + | chr4.3:34229877-34229896 | None:intergenic | 50.0% |
! | TATATGCGGAGTGGACTCCA+TGG | - | chr4.3:34232144-34232163 | MS.gene50738:CDS | 50.0% |
!! | GGAGTTTCGTCAGAGCGTTT+TGG | - | chr4.3:34230766-34230785 | MS.gene50738:intron | 50.0% |
!!! | CAGAGCGTTTTGGGATTGAG+AGG | - | chr4.3:34230776-34230795 | MS.gene50738:intron | 50.0% |
!!! | GAGCGTTTTGGGATTGAGAG+GGG | - | chr4.3:34230778-34230797 | MS.gene50738:intron | 50.0% |
!!! | GTTTTGGGATTGAGAGGGGT+GGG | - | chr4.3:34230782-34230801 | MS.gene50738:intron | 50.0% |
!!! | TTTTGGGATTGAGAGGGGTG+GGG | - | chr4.3:34230783-34230802 | MS.gene50738:intron | 50.0% |
AACCGGGTTCTTGTGATGCC+GGG | - | chr4.3:34231589-34231608 | MS.gene50738:intron | 55.0% | |
AATTCTCCCCCTCCAGCCAA+AGG | + | chr4.3:34229842-34229861 | None:intergenic | 55.0% | |
ACCGCCGTTGTCGCATTCAA+CGG | + | chr4.3:34229746-34229765 | None:intergenic | 55.0% | |
ACGCTCTGACGAAACTCCCT+CGG | + | chr4.3:34230764-34230783 | None:intergenic | 55.0% | |
AGGGCTCGTGTGGATCATGT+TGG | - | chr4.3:34231008-34231027 | MS.gene50738:CDS | 55.0% | |
ATGGATCCTTCGGCGGTTCA+CGG | - | chr4.3:34230713-34230732 | MS.gene50738:intron | 55.0% | |
ATTGTTGGGGTCCCACCATG+TGG | - | chr4.3:34229859-34229878 | MS.gene50738:intron | 55.0% | |
CAACCGGGTTCTTGTGATGC+CGG | - | chr4.3:34231588-34231607 | MS.gene50738:intron | 55.0% | |
CATCAGACCACCATTGCACC+CGG | + | chr4.3:34231610-34231629 | None:intergenic | 55.0% | |
CCTGAACACCCTTAGTCAGG+AGG | + | chr4.3:34229714-34229733 | None:intergenic | 55.0% | |
CCTGTGCATGTTCCGTTACC+TGG | - | chr4.3:34229295-34229314 | MS.gene50738:CDS | 55.0% | |
CTGGAGGGGGAGAATTGTTG+GGG | - | chr4.3:34229846-34229865 | MS.gene50738:intron | 55.0% | |
CTTCATCGTCGACCACCTGT+CGG | + | chr4.3:34230556-34230575 | None:intergenic | 55.0% | |
GATGGTTCGAAGCAGAGACG+TGG | - | chr4.3:34228595-34228614 | MS.gene50738:intron | 55.0% | |
GCTGGAGGGGGAGAATTGTT+GGG | - | chr4.3:34229845-34229864 | MS.gene50738:intron | 55.0% | |
GGACTTTCGACACAAGGAGC+CGG | + | chr4.3:34229693-34229712 | None:intergenic | 55.0% | |
GGCAGCCACAGTAGAAACCA+TGG | + | chr4.3:34232164-34232183 | None:intergenic | 55.0% | |
GGTGCCCTATTCTTCAGCTG+TGG | - | chr4.3:34229381-34229400 | MS.gene50738:intron | 55.0% | |
GGTGCTCACTTTCTCTCGAC+CGG | - | chr4.3:34231058-34231077 | MS.gene50738:intron | 55.0% | |
GTAAAAACCACGGGACCCGT+AGG | + | chr4.3:34230380-34230399 | None:intergenic | 55.0% | |
GTGAGCACCTTCAAGTGCAC+CGG | + | chr4.3:34231047-34231066 | None:intergenic | 55.0% | |
TCACAAGAACCCGGTTGCTC+TGG | + | chr4.3:34231585-34231604 | None:intergenic | 55.0% | |
TCCAGTTGTCCGTTCTACGG+AGG | + | chr4.3:34228117-34228136 | None:intergenic | 55.0% | |
TCCGTTGAATGCGACAACGG+CGG | - | chr4.3:34229742-34229761 | MS.gene50738:intron | 55.0% | |
TCTTGTGATGCCGGGTGCAA+TGG | - | chr4.3:34231597-34231616 | MS.gene50738:intron | 55.0% | |
TTGTCCGTTCTACGGAGGCA+TGG | + | chr4.3:34228112-34228131 | None:intergenic | 55.0% | |
! | CGACGATGAAGAAGTGCGGT+TGG | - | chr4.3:34230565-34230584 | MS.gene50738:CDS | 55.0% |
!! | CCAGGTAACGGAACATGCAC+AGG | + | chr4.3:34229298-34229317 | None:intergenic | 55.0% |
!! | CCTCCTGACTAAGGGTGTTC+AGG | - | chr4.3:34229711-34229730 | MS.gene50738:intron | 55.0% |
!! | CCTGACTAAGGGTGTTCAGG+CGG | - | chr4.3:34229714-34229733 | MS.gene50738:intron | 55.0% |
!! | GGGTAGCCTTATGTACGCCA+TGG | - | chr4.3:34229402-34229421 | MS.gene50738:intron | 55.0% |
!!! | CGTTTTGGGATTGAGAGGGG+TGG | - | chr4.3:34230781-34230800 | MS.gene50738:intron | 55.0% |
CACCCGGCATCACAAGAACC+CGG | + | chr4.3:34231594-34231613 | None:intergenic | 60.0% | |
CCGCCTGAACACCCTTAGTC+AGG | + | chr4.3:34229717-34229736 | None:intergenic | 60.0% | |
GCCTCCGTAGAACGGACAAC+TGG | - | chr4.3:34228113-34228132 | MS.gene50738:CDS | 60.0% | |
GGCTGGAGGGGGAGAATTGT+TGG | - | chr4.3:34229844-34229863 | MS.gene50738:intron | 60.0% | |
GTAACACCGTGAACCGCCGA+AGG | + | chr4.3:34230722-34230741 | None:intergenic | 60.0% | |
GTCTGCACGAGGCCAGACAT+CGG | - | chr4.3:34229424-34229443 | MS.gene50738:intron | 60.0% | |
TGTACGCCATGGTCTGCACG+AGG | - | chr4.3:34229413-34229432 | MS.gene50738:intron | 60.0% | |
TGTGATGCCGGGTGCAATGG+TGG | - | chr4.3:34231600-34231619 | MS.gene50738:intron | 60.0% | |
TTCTTCGCGCATCACCCCAC+CGG | + | chr4.3:34231661-34231680 | None:intergenic | 60.0% | |
!! | ACTAAGGGTGTTCAGGCGGC+GGG | - | chr4.3:34229718-34229737 | MS.gene50738:intron | 60.0% |
!! | GACTAAGGGTGTTCAGGCGG+CGG | - | chr4.3:34229717-34229736 | MS.gene50738:intron | 60.0% |
GTCTGGCCTCGTGCAGACCA+TGG | + | chr4.3:34229422-34229441 | None:intergenic | 65.0% | |
TAAGAGGCCTACGGGTCCCG+TGG | - | chr4.3:34230370-34230389 | MS.gene50738:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 34227684 | 34232204 | 34227684 | ID=MS.gene50738 |
chr4.3 | mRNA | 34227684 | 34232204 | 34227684 | ID=MS.gene50738.t1;Parent=MS.gene50738 |
chr4.3 | exon | 34232027 | 34232204 | 34232027 | ID=MS.gene50738.t1.exon1;Parent=MS.gene50738.t1 |
chr4.3 | CDS | 34232027 | 34232204 | 34232027 | ID=cds.MS.gene50738.t1;Parent=MS.gene50738.t1 |
chr4.3 | exon | 34230820 | 34231051 | 34230820 | ID=MS.gene50738.t1.exon2;Parent=MS.gene50738.t1 |
chr4.3 | CDS | 34230820 | 34231051 | 34230820 | ID=cds.MS.gene50738.t1;Parent=MS.gene50738.t1 |
chr4.3 | exon | 34230426 | 34230678 | 34230426 | ID=MS.gene50738.t1.exon3;Parent=MS.gene50738.t1 |
chr4.3 | CDS | 34230426 | 34230678 | 34230426 | ID=cds.MS.gene50738.t1;Parent=MS.gene50738.t1 |
chr4.3 | exon | 34229089 | 34229328 | 34229089 | ID=MS.gene50738.t1.exon4;Parent=MS.gene50738.t1 |
chr4.3 | CDS | 34229089 | 34229328 | 34229089 | ID=cds.MS.gene50738.t1;Parent=MS.gene50738.t1 |
chr4.3 | exon | 34228981 | 34229028 | 34228981 | ID=MS.gene50738.t1.exon5;Parent=MS.gene50738.t1 |
chr4.3 | CDS | 34228981 | 34229028 | 34228981 | ID=cds.MS.gene50738.t1;Parent=MS.gene50738.t1 |
chr4.3 | exon | 34228759 | 34228878 | 34228759 | ID=MS.gene50738.t1.exon6;Parent=MS.gene50738.t1 |
chr4.3 | CDS | 34228759 | 34228878 | 34228759 | ID=cds.MS.gene50738.t1;Parent=MS.gene50738.t1 |
chr4.3 | exon | 34228066 | 34228312 | 34228066 | ID=MS.gene50738.t1.exon7;Parent=MS.gene50738.t1 |
chr4.3 | CDS | 34228066 | 34228312 | 34228066 | ID=cds.MS.gene50738.t1;Parent=MS.gene50738.t1 |
chr4.3 | exon | 34227684 | 34227961 | 34227684 | ID=MS.gene50738.t1.exon8;Parent=MS.gene50738.t1 |
chr4.3 | CDS | 34227684 | 34227961 | 34227684 | ID=cds.MS.gene50738.t1;Parent=MS.gene50738.t1 |
Gene Sequence |
Protein sequence |