Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070140.t1 | XP_013463630.1 | 98.2 | 568 | 7 | 2 | 1 | 567 | 1 | 566 | 1.80E-300 | 1041.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070140.t1 | O48713 | 64.6 | 573 | 173 | 7 | 1 | 549 | 1 | 567 | 3.7e-190 | 666.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070140.t1 | A0A072VHN3 | 98.2 | 568 | 7 | 2 | 1 | 567 | 1 | 566 | 1.3e-300 | 1041.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene070140 | 0.837447 | 5.17E-57 | -1.69E-46 |
| MS.gene049159 | MS.gene070140 | 0.820652 | 6.13E-53 | -1.69E-46 |
| MS.gene04918 | MS.gene070140 | 0.810199 | 1.30E-50 | -1.69E-46 |
| MS.gene04920 | MS.gene070140 | 0.808186 | 3.51E-50 | -1.69E-46 |
| MS.gene049283 | MS.gene070140 | 0.842817 | 2.05E-58 | -1.69E-46 |
| MS.gene049368 | MS.gene070140 | 0.835924 | 1.26E-56 | -1.69E-46 |
| MS.gene049452 | MS.gene070140 | 0.810319 | 1.22E-50 | -1.69E-46 |
| MS.gene049499 | MS.gene070140 | 0.824677 | 7.09E-54 | -1.69E-46 |
| MS.gene049801 | MS.gene070140 | 0.82573 | 4.00E-54 | -1.69E-46 |
| MS.gene049983 | MS.gene070140 | 0.881383 | 2.51E-70 | -1.69E-46 |
| MS.gene050085 | MS.gene070140 | 0.80945 | 1.88E-50 | -1.69E-46 |
| MS.gene050359 | MS.gene070140 | 0.801156 | 1.03E-48 | -1.69E-46 |
| MS.gene050551 | MS.gene070140 | 0.805801 | 1.12E-49 | -1.69E-46 |
| MS.gene050571 | MS.gene070140 | 0.807869 | 4.09E-50 | -1.69E-46 |
| MS.gene050646 | MS.gene070140 | 0.828107 | 1.08E-54 | -1.69E-46 |
| MS.gene050654 | MS.gene070140 | 0.863679 | 2.10E-64 | -1.69E-46 |
| MS.gene050689 | MS.gene070140 | 0.820982 | 5.14E-53 | -1.69E-46 |
| MS.gene050737 | MS.gene070140 | 0.84901 | 4.25E-60 | -1.69E-46 |
| MS.gene050941 | MS.gene070140 | 0.856077 | 4.11E-62 | -1.69E-46 |
| MS.gene051003 | MS.gene070140 | 0.8478 | 9.20E-60 | -1.69E-46 |
| MS.gene051198 | MS.gene070140 | 0.802091 | 6.61E-49 | -1.69E-46 |
| MS.gene051209 | MS.gene070140 | 0.802023 | 6.83E-49 | -1.69E-46 |
| MS.gene051234 | MS.gene070140 | 0.802843 | 4.63E-49 | -1.69E-46 |
| MS.gene051343 | MS.gene070140 | 0.80393 | 2.76E-49 | -1.69E-46 |
| MS.gene051363 | MS.gene070140 | 0.809678 | 1.68E-50 | -1.69E-46 |
| MS.gene051975 | MS.gene070140 | 0.816352 | 5.78E-52 | -1.69E-46 |
| MS.gene052118 | MS.gene070140 | 0.811702 | 6.13E-51 | -1.69E-46 |
| MS.gene052307 | MS.gene070140 | 0.820435 | 6.87E-53 | -1.69E-46 |
| MS.gene052342 | MS.gene070140 | 0.803336 | 3.66E-49 | -1.69E-46 |
| MS.gene052434 | MS.gene070140 | 0.804129 | 2.50E-49 | -1.69E-46 |
| MS.gene052463 | MS.gene070140 | 0.812557 | 3.99E-51 | -1.69E-46 |
| MS.gene052516 | MS.gene070140 | 0.803567 | 3.28E-49 | -1.69E-46 |
| MS.gene052518 | MS.gene070140 | 0.854841 | 9.41E-62 | -1.69E-46 |
| MS.gene052674 | MS.gene070140 | 0.804302 | 2.31E-49 | -1.69E-46 |
| MS.gene052675 | MS.gene070140 | 0.802152 | 6.42E-49 | -1.69E-46 |
| MS.gene052954 | MS.gene070140 | 0.80205 | 6.74E-49 | -1.69E-46 |
| MS.gene053058 | MS.gene070140 | 0.80759 | 4.69E-50 | -1.69E-46 |
| MS.gene053079 | MS.gene070140 | 0.810799 | 9.63E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene070140 | 0.803027 | 4.24E-49 | -1.69E-46 |
| MS.gene054004 | MS.gene070140 | 0.804172 | 2.45E-49 | -1.69E-46 |
| MS.gene054479 | MS.gene070140 | 0.854345 | 1.31E-61 | -1.69E-46 |
| MS.gene054489 | MS.gene070140 | 0.8236 | 1.27E-53 | -1.69E-46 |
| MS.gene05458 | MS.gene070140 | 0.826753 | 2.28E-54 | -1.69E-46 |
| MS.gene054651 | MS.gene070140 | 0.823981 | 1.03E-53 | -1.69E-46 |
| MS.gene054892 | MS.gene070140 | 0.80279 | 4.75E-49 | -1.69E-46 |
| MS.gene054893 | MS.gene070140 | 0.807367 | 5.23E-50 | -1.69E-46 |
| MS.gene05517 | MS.gene070140 | 0.829304 | 5.55E-55 | -1.69E-46 |
| MS.gene055513 | MS.gene070140 | 0.838936 | 2.14E-57 | -1.69E-46 |
| MS.gene056045 | MS.gene070140 | 0.839097 | 1.94E-57 | -1.69E-46 |
| MS.gene056174 | MS.gene070140 | 0.81441 | 1.56E-51 | -1.69E-46 |
| MS.gene056181 | MS.gene070140 | 0.82981 | 4.18E-55 | -1.69E-46 |
| MS.gene056699 | MS.gene070140 | 0.834908 | 2.28E-56 | -1.69E-46 |
| MS.gene056786 | MS.gene070140 | 0.801172 | 1.02E-48 | -1.69E-46 |
| MS.gene056831 | MS.gene070140 | 0.858926 | 5.89E-63 | -1.69E-46 |
| MS.gene056834 | MS.gene070140 | 0.802838 | 4.64E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene070140 | 0.826365 | 2.82E-54 | -1.69E-46 |
| MS.gene05690 | MS.gene070140 | 0.827526 | 1.49E-54 | -1.69E-46 |
| MS.gene057034 | MS.gene070140 | 0.820948 | 5.24E-53 | -1.69E-46 |
| MS.gene057208 | MS.gene070140 | 0.831205 | 1.91E-55 | -1.69E-46 |
| MS.gene05781 | MS.gene070140 | 0.813166 | 2.94E-51 | -1.69E-46 |
| MS.gene057855 | MS.gene070140 | 0.816196 | 6.26E-52 | -1.69E-46 |
| MS.gene058009 | MS.gene070140 | 0.803125 | 4.05E-49 | -1.69E-46 |
| MS.gene058010 | MS.gene070140 | 0.811591 | 6.48E-51 | -1.69E-46 |
| MS.gene058095 | MS.gene070140 | 0.802526 | 5.38E-49 | -1.69E-46 |
| MS.gene058159 | MS.gene070140 | 0.814031 | 1.89E-51 | -1.69E-46 |
| MS.gene058292 | MS.gene070140 | 0.823272 | 1.51E-53 | -1.69E-46 |
| MS.gene058427 | MS.gene070140 | 0.806231 | 9.09E-50 | -1.69E-46 |
| MS.gene058429 | MS.gene070140 | 0.804704 | 1.90E-49 | -1.69E-46 |
| MS.gene058595 | MS.gene070140 | 0.802561 | 5.29E-49 | -1.69E-46 |
| MS.gene058781 | MS.gene070140 | 0.865301 | 6.52E-65 | -1.69E-46 |
| MS.gene058783 | MS.gene070140 | 0.867736 | 1.10E-65 | -1.69E-46 |
| MS.gene058979 | MS.gene070140 | 0.807749 | 4.34E-50 | -1.69E-46 |
| MS.gene059146 | MS.gene070140 | 0.837505 | 5.00E-57 | -1.69E-46 |
| MS.gene059170 | MS.gene070140 | 0.812716 | 3.69E-51 | -1.69E-46 |
| MS.gene059283 | MS.gene070140 | 0.823069 | 1.69E-53 | -1.69E-46 |
| MS.gene05952 | MS.gene070140 | 0.827785 | 1.29E-54 | -1.69E-46 |
| MS.gene059842 | MS.gene070140 | 0.831603 | 1.52E-55 | -1.69E-46 |
| MS.gene060011 | MS.gene070140 | 0.806903 | 6.56E-50 | -1.69E-46 |
| MS.gene060085 | MS.gene070140 | 0.827208 | 1.78E-54 | -1.69E-46 |
| MS.gene060296 | MS.gene070140 | 0.814959 | 1.18E-51 | -1.69E-46 |
| MS.gene060435 | MS.gene070140 | 0.824807 | 6.61E-54 | -1.69E-46 |
| MS.gene060522 | MS.gene070140 | 0.803686 | 3.10E-49 | -1.69E-46 |
| MS.gene060527 | MS.gene070140 | 0.819529 | 1.11E-52 | -1.69E-46 |
| MS.gene060763 | MS.gene070140 | 0.808823 | 2.56E-50 | -1.69E-46 |
| MS.gene060777 | MS.gene070140 | 0.836792 | 7.60E-57 | -1.69E-46 |
| MS.gene060932 | MS.gene070140 | 0.857981 | 1.13E-62 | -1.69E-46 |
| MS.gene060933 | MS.gene070140 | 0.839994 | 1.14E-57 | -1.69E-46 |
| MS.gene060935 | MS.gene070140 | 0.873908 | 1.02E-67 | -1.69E-46 |
| MS.gene060937 | MS.gene070140 | 0.873587 | 1.31E-67 | -1.69E-46 |
| MS.gene061100 | MS.gene070140 | 0.849162 | 3.86E-60 | -1.69E-46 |
| MS.gene061160 | MS.gene070140 | 0.816453 | 5.49E-52 | -1.69E-46 |
| MS.gene06121 | MS.gene070140 | 0.818476 | 1.92E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070140.t1 | MTR_2g044200 | 98.944 | 568 | 3 | 2 | 1 | 567 | 1 | 566 | 0.0 | 1144 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070140.t1 | AT2G26460 | 70.246 | 568 | 149 | 8 | 1 | 549 | 1 | 567 | 0.0 | 737 |
Find 157 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAATCATTGTTGAGTTTC+TGG | 0.147645 | 2.4:+45892803 | None:intergenic |
| CCTTCCTCCCATATCCATTT+TGG | 0.164347 | 2.4:+45893401 | None:intergenic |
| CCTGAACCTGAACCTGTTTA+TGG | 0.175752 | 2.4:-45895449 | MS.gene070140:CDS |
| TACCTTCGTCTTGGTTCTTC+TGG | 0.197431 | 2.4:-45896168 | MS.gene070140:CDS |
| TGATTCTCTCTTGAAATAAT+AGG | 0.201096 | 2.4:+45895623 | None:intergenic |
| CTGTGCGGATTGACACTTTC+TGG | 0.246037 | 2.4:+45897995 | None:intergenic |
| TCTCTATATTTCGGCAATTC+TGG | 0.267583 | 2.4:+45900510 | None:intergenic |
| GAGCATACACATTTGGTTAA+AGG | 0.269058 | 2.4:-45898233 | MS.gene070140:CDS |
| AATGACATTCATTTATAATA+TGG | 0.274261 | 2.4:-45897768 | MS.gene070140:intron |
| GAGGAGAAGGATCGAGGTTT+AGG | 0.285126 | 2.4:-45893585 | MS.gene070140:CDS |
| TAACTCTCTGAGATGAAATT+AGG | 0.295433 | 2.4:+45893495 | None:intergenic |
| TGACTTGTCCAAAATGGATA+TGG | 0.298003 | 2.4:-45893409 | MS.gene070140:CDS |
| TGACACTTTCTGGTCTTCCT+TGG | 0.305203 | 2.4:+45898005 | None:intergenic |
| TTAGCTCGATCTCTATATTT+CGG | 0.308153 | 2.4:+45900501 | None:intergenic |
| TACACATTTGGTTAAAGGTT+TGG | 0.319904 | 2.4:-45898228 | MS.gene070140:CDS |
| CATACTCGAACCTTCTTTCC+AGG | 0.320100 | 2.4:+45892697 | None:intergenic |
| ACAGGTTCAGGTTCAGGTTC+AGG | 0.321721 | 2.4:+45895455 | None:intergenic |
| AGTTCAGTTTGTTCATAATC+AGG | 0.323683 | 2.4:+45900456 | None:intergenic |
| GACACTTTCTGGTCTTCCTT+GGG | 0.330504 | 2.4:+45898006 | None:intergenic |
| CCAAACTGGAATGCAGCTTT+TGG | 0.334758 | 2.4:+45892871 | None:intergenic |
| CCATAAACAGGTTCAGGTTC+AGG | 0.339144 | 2.4:+45895449 | None:intergenic |
| GAAAATTACTTGCGGCGAAT+TGG | 0.342557 | 2.4:+45900659 | None:intergenic |
| TGAAGCTGACTTGTCCAAAA+TGG | 0.345502 | 2.4:-45893415 | MS.gene070140:CDS |
| CATCTCATTTGTCTTGCTAA+TGG | 0.353248 | 2.4:+45897805 | None:intergenic |
| CAAAGGGCCGACTTCATAGA+TGG | 0.366170 | 2.4:-45892948 | MS.gene070140:CDS |
| GGTCCTAAAGAAGAAGAAAA+AGG | 0.371342 | 2.4:-45896142 | MS.gene070140:CDS |
| ATGGTTACAGTTAATGTTGA+TGG | 0.372672 | 2.4:-45896225 | MS.gene070140:CDS |
| CTCCTGGTACCGTTGATATC+AGG | 0.375252 | 2.4:-45900413 | MS.gene070140:intron |
| TCCCCATCGTCCCCAGCATC+TGG | 0.379838 | 2.4:+45898164 | None:intergenic |
| CCAAAAGCTGCATTCCAGTT+TGG | 0.383098 | 2.4:-45892871 | MS.gene070140:CDS |
| TTCGGCAATTCTGGTTCCTC+TGG | 0.388090 | 2.4:+45900519 | None:intergenic |
| TTTCATGCTGTTGCTCCTCC+TGG | 0.401020 | 2.4:-45900429 | MS.gene070140:CDS |
| CTTGCATCTTCACACCAAAC+TGG | 0.402836 | 2.4:+45892857 | None:intergenic |
| GATTATGAACAAACTGAACT+TGG | 0.412329 | 2.4:-45900453 | MS.gene070140:CDS |
| ATAGGACCATAAACAGGTTC+AGG | 0.412746 | 2.4:+45895443 | None:intergenic |
| GAGATTAAGAAGCCAGATGC+TGG | 0.428922 | 2.4:-45898176 | MS.gene070140:CDS |
| CGAACCTTCTTTCCAGGGGT+TGG | 0.435893 | 2.4:+45892703 | None:intergenic |
| AAGCCAGTTGTTCAGCATAC+TGG | 0.444944 | 2.4:+45893697 | None:intergenic |
| TGATGTGGAGCATACACATT+TGG | 0.448131 | 2.4:-45898240 | MS.gene070140:CDS |
| GTACCAGTATGCTGAACAAC+TGG | 0.454424 | 2.4:-45893700 | MS.gene070140:CDS |
| ATGTCTTCAGAGACAGGACT+TGG | 0.455543 | 2.4:+45895524 | None:intergenic |
| TTCTTCATGGGAGGTGGAGG+TGG | 0.457659 | 2.4:+45895650 | None:intergenic |
| GATGCTGGGGACGATGGGGA+TGG | 0.459699 | 2.4:-45898161 | MS.gene070140:CDS |
| TCGTCTTGGTTCTTCTGGAA+AGG | 0.460660 | 2.4:-45896163 | MS.gene070140:CDS |
| TCTTCCATGTCTTCAGAGAC+AGG | 0.467650 | 2.4:+45895518 | None:intergenic |
| GTGGAATATTTACATCTGCT+TGG | 0.469889 | 2.4:+45893631 | None:intergenic |
| TATGATGATGAGCCAACCCC+TGG | 0.471163 | 2.4:-45892715 | MS.gene070140:CDS |
| CAAAACATGCAGGGTTATGA+TGG | 0.478645 | 2.4:-45893654 | MS.gene070140:CDS |
| AGCCAGATGCTGGGGACGAT+GGG | 0.480317 | 2.4:-45898166 | MS.gene070140:CDS |
| TGGTCCTATCCCACCTGTGA+TGG | 0.486491 | 2.4:-45895429 | MS.gene070140:CDS |
| GATACTCTCAAGAAAGAAGA+TGG | 0.487462 | 2.4:-45892767 | MS.gene070140:CDS |
| AGAATATAACCGTGAGGTAG+TGG | 0.487882 | 2.4:-45893448 | MS.gene070140:CDS |
| GGTACTCCTGCCATTCCCCT+TGG | 0.494602 | 2.4:+45893718 | None:intergenic |
| AGGTGTTAACTATGAGATAC+CGG | 0.495908 | 2.4:-45895552 | MS.gene070140:CDS |
| GTCATAAAGCGTGGATCTTG+TGG | 0.496618 | 2.4:+45893612 | None:intergenic |
| AAGCCAGATGCTGGGGACGA+TGG | 0.497861 | 2.4:-45898167 | MS.gene070140:CDS |
| TGCCATCCTTGATCCATCAC+AGG | 0.501132 | 2.4:+45895416 | None:intergenic |
| ATCCCACCTGTGATGGATCA+AGG | 0.501278 | 2.4:-45895422 | MS.gene070140:CDS |
| CTCAAGAAAGAAGATGGATA+AGG | 0.502536 | 2.4:-45892761 | MS.gene070140:CDS |
| TTACTACGGTGCAAGGTCGT+TGG | 0.503521 | 2.4:+45896358 | None:intergenic |
| ATGCTGGGGACGATGGGGAT+GGG | 0.504232 | 2.4:-45898160 | MS.gene070140:CDS |
| AGTTACTCTGAATGTTACCC+TGG | 0.505676 | 2.4:-45893477 | MS.gene070140:CDS |
| GGAGGTGGAGGTGGAAGGAT+AGG | 0.506939 | 2.4:+45895659 | None:intergenic |
| TGATCCATCACAGGTGGGAT+AGG | 0.507281 | 2.4:+45895425 | None:intergenic |
| GGATCACAAACCTCGGGCAC+TGG | 0.512302 | 2.4:+45896325 | None:intergenic |
| ATTATATTGTTCAGGTGATG+TGG | 0.512628 | 2.4:-45898255 | MS.gene070140:intron |
| TCAGGTTCAGCGAAATATTG+AGG | 0.516893 | 2.4:+45895473 | None:intergenic |
| TGGCTACCAAGGGGAATGGC+AGG | 0.520971 | 2.4:-45893724 | MS.gene070140:CDS |
| CTGGCAAAGGTTGAAGGTGT+GGG | 0.521083 | 2.4:-45895707 | MS.gene070140:CDS |
| TCTTCTTCTCTAGCAACAGC+TGG | 0.522582 | 2.4:+45895596 | None:intergenic |
| GATAAGCTGGCAAAGGTTGA+AGG | 0.524590 | 2.4:-45895713 | MS.gene070140:CDS |
| GACTTGTCCAAAATGGATAT+GGG | 0.526193 | 2.4:-45893408 | MS.gene070140:CDS |
| AGATCGAGCTAAAGAACGTA+GGG | 0.526893 | 2.4:-45900490 | MS.gene070140:CDS |
| GGTGGGATAGGACCATAAAC+AGG | 0.531676 | 2.4:+45895437 | None:intergenic |
| CGGTTATATTCTTGATACCC+AGG | 0.533605 | 2.4:+45893459 | None:intergenic |
| GCCATGGTTGGTGGCTACCA+AGG | 0.539002 | 2.4:-45893735 | MS.gene070140:CDS |
| ATATCTTCAGCAAAACATGC+AGG | 0.539790 | 2.4:-45893664 | MS.gene070140:CDS |
| AGATTAAGAAGCCAGATGCT+GGG | 0.539905 | 2.4:-45898175 | MS.gene070140:CDS |
| TGAGCCAACCCCTGGAAAGA+AGG | 0.542377 | 2.4:-45892707 | MS.gene070140:CDS |
| ATTATTTCAAGAGAGAATCA+AGG | 0.545022 | 2.4:-45895620 | MS.gene070140:CDS |
| CCAAAATGGATATGGGAGGA+AGG | 0.547579 | 2.4:-45893401 | MS.gene070140:CDS |
| ATAATGTCATACCTTCGTCT+TGG | 0.547711 | 2.4:-45896177 | MS.gene070140:CDS |
| TCATGGGAGGTGGAGGTGGA+AGG | 0.550072 | 2.4:+45895654 | None:intergenic |
| ATATGACAAAGAGGATAAGC+TGG | 0.550265 | 2.4:-45895726 | MS.gene070140:CDS |
| TGTCTTCAGAGACAGGACTT+GGG | 0.551378 | 2.4:+45895525 | None:intergenic |
| CCATGGTTGGTGGCTACCAA+GGG | 0.553628 | 2.4:-45893734 | MS.gene070140:CDS |
| ACTTCAACAGCTGAGGGAGA+AGG | 0.558098 | 2.4:-45893535 | MS.gene070140:CDS |
| TGTTTAATCTGGTAGGAGAG+TGG | 0.560149 | 2.4:-45896397 | MS.gene070140:intron |
| AAGTCCTGTCTCTGAAGACA+TGG | 0.563492 | 2.4:-45895522 | MS.gene070140:CDS |
| TACTCGAACCTTCTTTCCAG+GGG | 0.565097 | 2.4:+45892699 | None:intergenic |
| ATACTCGAACCTTCTTTCCA+GGG | 0.566395 | 2.4:+45892698 | None:intergenic |
| GGATCAAGGATGGCAAGAAA+CGG | 0.567612 | 2.4:-45895408 | MS.gene070140:intron |
| TTTGTCTTGCTAATGGTCTG+TGG | 0.567962 | 2.4:+45897812 | None:intergenic |
| GTCTTCAGAGACAGGACTTG+GGG | 0.568105 | 2.4:+45895526 | None:intergenic |
| GCTGGCAAAGGTTGAAGGTG+TGG | 0.569940 | 2.4:-45895708 | MS.gene070140:CDS |
| AAAGAAGATGGATAAGGAAG+GGG | 0.571070 | 2.4:-45892755 | MS.gene070140:CDS |
| CAAACACAAGCCATGGTTGG+TGG | 0.574657 | 2.4:-45893744 | MS.gene070140:CDS |
| TGTGCATTCTGACAGGCAAA+GGG | 0.575320 | 2.4:-45892964 | MS.gene070140:intron |
| AATCCGCACAGCAGTTGCTA+AGG | 0.575449 | 2.4:-45897983 | MS.gene070140:intron |
| TAAATGAATGTCATTCGACC+AGG | 0.575559 | 2.4:+45897776 | None:intergenic |
| TACCTGATATCAACGGTACC+AGG | 0.576314 | 2.4:+45900411 | None:intergenic |
| AAAGGGCCGACTTCATAGAT+GGG | 0.576501 | 2.4:-45892947 | MS.gene070140:CDS |
| CGGGAGACTTCAACAGCTGA+GGG | 0.578563 | 2.4:-45893541 | MS.gene070140:CDS |
| AGAAAGAAGATGGATAAGGA+AGG | 0.578861 | 2.4:-45892757 | MS.gene070140:CDS |
| AGCTGATTGTCCAGTGCCCG+AGG | 0.580835 | 2.4:-45896335 | MS.gene070140:intron |
| CTTTATGACTCAAGAGGAGA+AGG | 0.582067 | 2.4:-45893598 | MS.gene070140:CDS |
| CCCTTGGTAGCCACCAACCA+TGG | 0.585931 | 2.4:+45893734 | None:intergenic |
| TTGGTGGCTACCAAGGGGAA+TGG | 0.588510 | 2.4:-45893728 | MS.gene070140:CDS |
| AAGAAGATGGATAAGGAAGG+GGG | 0.589776 | 2.4:-45892754 | MS.gene070140:CDS |
| TTTGCTGAAGATATTGATCA+GGG | 0.591306 | 2.4:+45893673 | None:intergenic |
| TATTTCAGTCAGTTTATCAG+TGG | 0.592096 | 2.4:-45897844 | MS.gene070140:intron |
| ACGATGGGGATGGGAAACCC+AGG | 0.594664 | 2.4:-45898151 | MS.gene070140:intron |
| CAAAATCCCATCTATGAAGT+CGG | 0.595159 | 2.4:+45892941 | None:intergenic |
| GGCTACTTACAATGAGCAGA+AGG | 0.596962 | 2.4:-45892902 | MS.gene070140:CDS |
| ATCAGCTTTACTACGGTGCA+AGG | 0.597060 | 2.4:+45896351 | None:intergenic |
| CATCCTTGATCCATCACAGG+TGG | 0.597102 | 2.4:+45895419 | None:intergenic |
| CACCTGTGATGGATCAAGGA+TGG | 0.598804 | 2.4:-45895418 | MS.gene070140:CDS |
| GAAAGAAGATGGATAAGGAA+GGG | 0.598933 | 2.4:-45892756 | MS.gene070140:CDS |
| ACGGGAGACTTCAACAGCTG+AGG | 0.600542 | 2.4:-45893542 | MS.gene070140:CDS |
| ACAAATGAGATGTTCCTCCC+TGG | 0.600907 | 2.4:-45897794 | MS.gene070140:CDS |
| CAAAATGGATATGGGAGGAA+GGG | 0.601295 | 2.4:-45893400 | MS.gene070140:intron |
| TCCTCTTGAGTCATAAAGCG+TGG | 0.603489 | 2.4:+45893603 | None:intergenic |
| CTGGACAATCAGCTTTACTA+CGG | 0.614232 | 2.4:+45896344 | None:intergenic |
| GGTTATATTCTTGATACCCA+GGG | 0.614330 | 2.4:+45893460 | None:intergenic |
| GATTAAGAAGCCAGATGCTG+GGG | 0.617123 | 2.4:-45898174 | MS.gene070140:CDS |
| CAAAGAGGATAAGCTGGCAA+AGG | 0.619590 | 2.4:-45895720 | MS.gene070140:CDS |
| GTTACTCTGAATGTTACCCT+GGG | 0.620215 | 2.4:-45893476 | MS.gene070140:CDS |
| GCCAGATGCTGGGGACGATG+GGG | 0.623496 | 2.4:-45898165 | MS.gene070140:CDS |
| TCCACGCTTTATGACTCAAG+AGG | 0.627565 | 2.4:-45893604 | MS.gene070140:CDS |
| TATCTTCAGCAAAACATGCA+GGG | 0.628550 | 2.4:-45893663 | MS.gene070140:CDS |
| GAGATCGAGCTAAAGAACGT+AGG | 0.631640 | 2.4:-45900491 | MS.gene070140:CDS |
| AGGTCGTTGGAATATCATGA+TGG | 0.636236 | 2.4:+45896371 | None:intergenic |
| ATCCTTGATCCATCACAGGT+GGG | 0.641778 | 2.4:+45895420 | None:intergenic |
| ACTCAAGAGGAGAAGGATCG+AGG | 0.649454 | 2.4:-45893591 | MS.gene070140:CDS |
| TGGCAAAGGTTGAAGGTGTG+GGG | 0.651053 | 2.4:-45895706 | MS.gene070140:CDS |
| CATCACTGTCCACTACCTCA+CGG | 0.651738 | 2.4:+45893439 | None:intergenic |
| GAAACTTTACCTGATATCAA+CGG | 0.665174 | 2.4:+45900404 | None:intergenic |
| TTGTCCAAAATGGATATGGG+AGG | 0.666128 | 2.4:-45893405 | MS.gene070140:CDS |
| TTTGGTGTGAAGATGCAAGA+TGG | 0.667200 | 2.4:-45892853 | MS.gene070140:CDS |
| TGGTAATGGATATGACAAAG+AGG | 0.672903 | 2.4:-45895735 | MS.gene070140:CDS |
| GTGTGAAGATGCAAGATGGT+CGG | 0.674279 | 2.4:-45892849 | MS.gene070140:CDS |
| TCTTCAGAGACAGGACTTGG+GGG | 0.681769 | 2.4:+45895527 | None:intergenic |
| ATTGAGAAGAGCAAGTACCT+CGG | 0.682783 | 2.4:-45900275 | MS.gene070140:CDS |
| ATGCAAACACAAGCCATGGT+TGG | 0.685017 | 2.4:-45893747 | MS.gene070140:CDS |
| AAATGAATGTCATTCGACCA+GGG | 0.685498 | 2.4:+45897777 | None:intergenic |
| TGTAATGCAAACACAAGCCA+TGG | 0.686530 | 2.4:-45893751 | MS.gene070140:CDS |
| GGTGTTAACTATGAGATACC+GGG | 0.692727 | 2.4:-45895551 | MS.gene070140:CDS |
| GAAAACTAGAAAGCAAAACA+AGG | 0.703790 | 2.4:-45892827 | MS.gene070140:CDS |
| CATGGTTGGTGGCTACCAAG+GGG | 0.707037 | 2.4:-45893733 | MS.gene070140:CDS |
| GAACCTTAGCAACTGCTGTG+CGG | 0.708025 | 2.4:+45897980 | None:intergenic |
| TTCCAGAAGAACCAAGACGA+AGG | 0.720529 | 2.4:+45896166 | None:intergenic |
| GAGAAGAGCAAGTACCTCGG+AGG | 0.728646 | 2.4:-45900272 | MS.gene070140:intron |
| CTGATATCAACGGTACCAGG+AGG | 0.732385 | 2.4:+45900414 | None:intergenic |
| GTACAGGGAAGAGAAACCAG+AGG | 0.733333 | 2.4:-45900535 | MS.gene070140:intron |
| AAGTACAAGACGAACCTCCG+AGG | 0.739210 | 2.4:+45900258 | None:intergenic |
| GTATCAAGAATATAACCGTG+AGG | 0.769653 | 2.4:-45893454 | MS.gene070140:CDS |
| TGAATGTCATTCGACCAGGG+AGG | 0.782114 | 2.4:+45897780 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 45892696 | 45900714 | 45892696 | ID=MS.gene070140 |
| chr2.4 | mRNA | 45892696 | 45900714 | 45892696 | ID=MS.gene070140.t1;Parent=MS.gene070140 |
| chr2.4 | exon | 45900668 | 45900714 | 45900668 | ID=MS.gene070140.t1.exon1;Parent=MS.gene070140.t1 |
| chr2.4 | CDS | 45900668 | 45900714 | 45900668 | ID=cds.MS.gene070140.t1;Parent=MS.gene070140.t1 |
| chr2.4 | exon | 45900414 | 45900551 | 45900414 | ID=MS.gene070140.t1.exon2;Parent=MS.gene070140.t1 |
| chr2.4 | CDS | 45900414 | 45900551 | 45900414 | ID=cds.MS.gene070140.t1;Parent=MS.gene070140.t1 |
| chr2.4 | exon | 45900273 | 45900322 | 45900273 | ID=MS.gene070140.t1.exon3;Parent=MS.gene070140.t1 |
| chr2.4 | CDS | 45900273 | 45900322 | 45900273 | ID=cds.MS.gene070140.t1;Parent=MS.gene070140.t1 |
| chr2.4 | exon | 45898152 | 45898263 | 45898152 | ID=MS.gene070140.t1.exon4;Parent=MS.gene070140.t1 |
| chr2.4 | CDS | 45898152 | 45898263 | 45898152 | ID=cds.MS.gene070140.t1;Parent=MS.gene070140.t1 |
| chr2.4 | exon | 45897984 | 45898032 | 45897984 | ID=MS.gene070140.t1.exon5;Parent=MS.gene070140.t1 |
| chr2.4 | CDS | 45897984 | 45898032 | 45897984 | ID=cds.MS.gene070140.t1;Parent=MS.gene070140.t1 |
| chr2.4 | exon | 45897769 | 45897858 | 45897769 | ID=MS.gene070140.t1.exon6;Parent=MS.gene070140.t1 |
| chr2.4 | CDS | 45897769 | 45897858 | 45897769 | ID=cds.MS.gene070140.t1;Parent=MS.gene070140.t1 |
| chr2.4 | exon | 45896336 | 45896404 | 45896336 | ID=MS.gene070140.t1.exon7;Parent=MS.gene070140.t1 |
| chr2.4 | CDS | 45896336 | 45896404 | 45896336 | ID=cds.MS.gene070140.t1;Parent=MS.gene070140.t1 |
| chr2.4 | exon | 45896127 | 45896250 | 45896127 | ID=MS.gene070140.t1.exon8;Parent=MS.gene070140.t1 |
| chr2.4 | CDS | 45896127 | 45896250 | 45896127 | ID=cds.MS.gene070140.t1;Parent=MS.gene070140.t1 |
| chr2.4 | exon | 45895409 | 45895773 | 45895409 | ID=MS.gene070140.t1.exon9;Parent=MS.gene070140.t1 |
| chr2.4 | CDS | 45895409 | 45895773 | 45895409 | ID=cds.MS.gene070140.t1;Parent=MS.gene070140.t1 |
| chr2.4 | exon | 45893401 | 45893784 | 45893401 | ID=MS.gene070140.t1.exon10;Parent=MS.gene070140.t1 |
| chr2.4 | CDS | 45893401 | 45893784 | 45893401 | ID=cds.MS.gene070140.t1;Parent=MS.gene070140.t1 |
| chr2.4 | exon | 45892696 | 45892971 | 45892696 | ID=MS.gene070140.t1.exon11;Parent=MS.gene070140.t1 |
| chr2.4 | CDS | 45892696 | 45892971 | 45892696 | ID=cds.MS.gene070140.t1;Parent=MS.gene070140.t1 |
| Gene Sequence |
| Protein sequence |
