Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93196.t1 | RHN77926.1 | 92.4 | 211 | 15 | 1 | 1 | 211 | 1 | 210 | 2.30E-105 | 391.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93196.t1 | Q7Y1X1 | 67.4 | 193 | 62 | 1 | 19 | 211 | 17 | 208 | 4.9e-72 | 272.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93196.t1 | A0A396JI75 | 92.4 | 211 | 15 | 1 | 1 | 211 | 1 | 210 | 1.7e-105 | 391.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene93196 | -0.85242 | 4.67E-61 | -1.69E-46 |
| MS.gene049222 | MS.gene93196 | -0.821805 | 3.32E-53 | -1.69E-46 |
| MS.gene049285 | MS.gene93196 | -0.818861 | 1.57E-52 | -1.69E-46 |
| MS.gene049320 | MS.gene93196 | -0.836893 | 7.16E-57 | -1.69E-46 |
| MS.gene04932 | MS.gene93196 | 0.809779 | 1.60E-50 | -1.69E-46 |
| MS.gene049549 | MS.gene93196 | 0.808145 | 3.58E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene93196 | -0.806217 | 9.16E-50 | -1.69E-46 |
| MS.gene049633 | MS.gene93196 | -0.843789 | 1.13E-58 | -1.69E-46 |
| MS.gene050082 | MS.gene93196 | 0.815202 | 1.04E-51 | -1.69E-46 |
| MS.gene050163 | MS.gene93196 | -0.824781 | 6.70E-54 | -1.69E-46 |
| MS.gene050165 | MS.gene93196 | -0.836366 | 9.76E-57 | -1.69E-46 |
| MS.gene050170 | MS.gene93196 | -0.842351 | 2.73E-58 | -1.69E-46 |
| MS.gene050323 | MS.gene93196 | -0.843642 | 1.24E-58 | -1.69E-46 |
| MS.gene050333 | MS.gene93196 | -0.806144 | 9.49E-50 | -1.69E-46 |
| MS.gene050338 | MS.gene93196 | 0.849233 | 3.69E-60 | -1.69E-46 |
| MS.gene050444 | MS.gene93196 | -0.822627 | 2.14E-53 | -1.69E-46 |
| MS.gene050496 | MS.gene93196 | -0.827868 | 1.23E-54 | -1.69E-46 |
| MS.gene050504 | MS.gene93196 | -0.832663 | 8.31E-56 | -1.69E-46 |
| MS.gene050518 | MS.gene93196 | -0.821579 | 3.75E-53 | -1.69E-46 |
| MS.gene050577 | MS.gene93196 | -0.84511 | 4.98E-59 | -1.69E-46 |
| MS.gene050612 | MS.gene93196 | -0.854127 | 1.51E-61 | -1.69E-46 |
| MS.gene050647 | MS.gene93196 | 0.818911 | 1.53E-52 | -1.69E-46 |
| MS.gene050675 | MS.gene93196 | -0.840001 | 1.13E-57 | -1.69E-46 |
| MS.gene050699 | MS.gene93196 | -0.82371 | 1.20E-53 | -1.69E-46 |
| MS.gene050772 | MS.gene93196 | -0.816458 | 5.47E-52 | -1.69E-46 |
| MS.gene05080 | MS.gene93196 | -0.828085 | 1.09E-54 | -1.69E-46 |
| MS.gene050868 | MS.gene93196 | -0.817476 | 3.23E-52 | -1.69E-46 |
| MS.gene050871 | MS.gene93196 | -0.815426 | 9.30E-52 | -1.69E-46 |
| MS.gene050904 | MS.gene93196 | -0.830377 | 3.04E-55 | -1.69E-46 |
| MS.gene050986 | MS.gene93196 | -0.815605 | 8.48E-52 | -1.69E-46 |
| MS.gene051127 | MS.gene93196 | 0.824449 | 8.02E-54 | -1.69E-46 |
| MS.gene051138 | MS.gene93196 | 0.842713 | 2.19E-58 | -1.69E-46 |
| MS.gene051268 | MS.gene93196 | -0.825869 | 3.70E-54 | -1.69E-46 |
| MS.gene051317 | MS.gene93196 | -0.839501 | 1.53E-57 | -1.69E-46 |
| MS.gene051422 | MS.gene93196 | 0.817383 | 3.39E-52 | -1.69E-46 |
| MS.gene051651 | MS.gene93196 | 0.861213 | 1.20E-63 | -1.69E-46 |
| MS.gene051749 | MS.gene93196 | 0.82386 | 1.10E-53 | -1.69E-46 |
| MS.gene051810 | MS.gene93196 | -0.802968 | 4.36E-49 | -1.69E-46 |
| MS.gene051838 | MS.gene93196 | -0.800339 | 1.51E-48 | -1.69E-46 |
| MS.gene051874 | MS.gene93196 | -0.820941 | 5.26E-53 | -1.69E-46 |
| MS.gene052129 | MS.gene93196 | 0.825604 | 4.28E-54 | -1.69E-46 |
| MS.gene052164 | MS.gene93196 | -0.81967 | 1.03E-52 | -1.69E-46 |
| MS.gene05240 | MS.gene93196 | 0.831589 | 1.53E-55 | -1.69E-46 |
| MS.gene05244 | MS.gene93196 | 0.82834 | 9.49E-55 | -1.69E-46 |
| MS.gene052606 | MS.gene93196 | 0.838674 | 2.50E-57 | -1.69E-46 |
| MS.gene052702 | MS.gene93196 | 0.804125 | 2.51E-49 | -1.69E-46 |
| MS.gene052872 | MS.gene93196 | -0.810017 | 1.42E-50 | -1.69E-46 |
| MS.gene052916 | MS.gene93196 | -0.800465 | 1.42E-48 | -1.69E-46 |
| MS.gene053203 | MS.gene93196 | -0.818081 | 2.36E-52 | -1.69E-46 |
| MS.gene053420 | MS.gene93196 | 0.824255 | 8.91E-54 | -1.69E-46 |
| MS.gene053479 | MS.gene93196 | -0.821556 | 3.79E-53 | -1.69E-46 |
| MS.gene053824 | MS.gene93196 | -0.812822 | 3.49E-51 | -1.69E-46 |
| MS.gene053887 | MS.gene93196 | 0.808695 | 2.73E-50 | -1.69E-46 |
| MS.gene053916 | MS.gene93196 | -0.820232 | 7.65E-53 | -1.69E-46 |
| MS.gene053920 | MS.gene93196 | 0.821567 | 3.77E-53 | -1.69E-46 |
| MS.gene054181 | MS.gene93196 | 0.802391 | 5.74E-49 | -1.69E-46 |
| MS.gene054642 | MS.gene93196 | -0.821503 | 3.90E-53 | -1.69E-46 |
| MS.gene054706 | MS.gene93196 | 0.827805 | 1.28E-54 | -1.69E-46 |
| MS.gene05470 | MS.gene93196 | -0.857143 | 1.99E-62 | -1.69E-46 |
| MS.gene05483 | MS.gene93196 | 0.815329 | 9.78E-52 | -1.69E-46 |
| MS.gene054884 | MS.gene93196 | 0.827291 | 1.70E-54 | -1.69E-46 |
| MS.gene054954 | MS.gene93196 | -0.82648 | 2.65E-54 | -1.69E-46 |
| MS.gene055158 | MS.gene93196 | 0.810329 | 1.22E-50 | -1.69E-46 |
| MS.gene055251 | MS.gene93196 | 0.810308 | 1.23E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene93196 | -0.824695 | 7.02E-54 | -1.69E-46 |
| MS.gene055502 | MS.gene93196 | -0.831627 | 1.50E-55 | -1.69E-46 |
| MS.gene055577 | MS.gene93196 | -0.827326 | 1.66E-54 | -1.69E-46 |
| MS.gene055729 | MS.gene93196 | 0.824555 | 7.58E-54 | -1.69E-46 |
| MS.gene055730 | MS.gene93196 | 0.828665 | 7.93E-55 | -1.69E-46 |
| MS.gene055731 | MS.gene93196 | 0.830068 | 3.62E-55 | -1.69E-46 |
| MS.gene055748 | MS.gene93196 | -0.851955 | 6.33E-61 | -1.69E-46 |
| MS.gene055750 | MS.gene93196 | -0.82771 | 1.35E-54 | -1.69E-46 |
| MS.gene055751 | MS.gene93196 | -0.853875 | 1.79E-61 | -1.69E-46 |
| MS.gene05589 | MS.gene93196 | -0.864189 | 1.45E-64 | -1.69E-46 |
| MS.gene056224 | MS.gene93196 | 0.82632 | 2.89E-54 | -1.69E-46 |
| MS.gene056283 | MS.gene93196 | -0.809246 | 2.08E-50 | -1.69E-46 |
| MS.gene056387 | MS.gene93196 | -0.820611 | 6.26E-53 | -1.69E-46 |
| MS.gene056504 | MS.gene93196 | -0.85024 | 1.93E-60 | -1.69E-46 |
| MS.gene056590 | MS.gene93196 | 0.835285 | 1.83E-56 | -1.69E-46 |
| MS.gene056591 | MS.gene93196 | 0.833801 | 4.33E-56 | -1.69E-46 |
| MS.gene056657 | MS.gene93196 | -0.820795 | 5.68E-53 | -1.69E-46 |
| MS.gene056678 | MS.gene93196 | 0.817858 | 2.65E-52 | -1.69E-46 |
| MS.gene056688 | MS.gene93196 | 0.824528 | 7.69E-54 | -1.69E-46 |
| MS.gene056692 | MS.gene93196 | -0.841215 | 5.44E-58 | -1.69E-46 |
| MS.gene056694 | MS.gene93196 | 0.84358 | 1.28E-58 | -1.69E-46 |
| MS.gene056697 | MS.gene93196 | 0.84826 | 6.86E-60 | -1.69E-46 |
| MS.gene056748 | MS.gene93196 | 0.824362 | 8.41E-54 | -1.69E-46 |
| MS.gene056856 | MS.gene93196 | 0.876847 | 1.01E-68 | -1.69E-46 |
| MS.gene056857 | MS.gene93196 | 0.804507 | 2.09E-49 | -1.69E-46 |
| MS.gene057544 | MS.gene93196 | 0.802925 | 4.45E-49 | -1.69E-46 |
| MS.gene057658 | MS.gene93196 | -0.810105 | 1.36E-50 | -1.69E-46 |
| MS.gene057717 | MS.gene93196 | 0.818843 | 1.59E-52 | -1.69E-46 |
| MS.gene057768 | MS.gene93196 | 0.833327 | 5.68E-56 | -1.69E-46 |
| MS.gene057831 | MS.gene93196 | -0.823608 | 1.26E-53 | -1.69E-46 |
| MS.gene058067 | MS.gene93196 | 0.810917 | 9.08E-51 | -1.69E-46 |
| MS.gene058268 | MS.gene93196 | 0.832935 | 7.11E-56 | -1.69E-46 |
| MS.gene058269 | MS.gene93196 | 0.82446 | 7.98E-54 | -1.69E-46 |
| MS.gene058334 | MS.gene93196 | 0.830231 | 3.30E-55 | -1.69E-46 |
| MS.gene058338 | MS.gene93196 | -0.805781 | 1.13E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene93196 | -0.8139 | 2.03E-51 | -1.69E-46 |
| MS.gene058382 | MS.gene93196 | 0.814156 | 1.78E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene93196 | -0.847724 | 9.65E-60 | -1.69E-46 |
| MS.gene058544 | MS.gene93196 | -0.837461 | 5.13E-57 | -1.69E-46 |
| MS.gene058603 | MS.gene93196 | 0.807333 | 5.32E-50 | -1.69E-46 |
| MS.gene058723 | MS.gene93196 | -0.8056 | 1.23E-49 | -1.69E-46 |
| MS.gene058838 | MS.gene93196 | -0.849969 | 2.30E-60 | -1.69E-46 |
| MS.gene059022 | MS.gene93196 | -0.832165 | 1.10E-55 | -1.69E-46 |
| MS.gene059023 | MS.gene93196 | -0.842971 | 1.87E-58 | -1.69E-46 |
| MS.gene05914 | MS.gene93196 | -0.800497 | 1.40E-48 | -1.69E-46 |
| MS.gene05926 | MS.gene93196 | 0.828245 | 1.00E-54 | -1.69E-46 |
| MS.gene059526 | MS.gene93196 | 0.804709 | 1.90E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene93196 | -0.823558 | 1.30E-53 | -1.69E-46 |
| MS.gene059677 | MS.gene93196 | -0.840331 | 9.27E-58 | -1.69E-46 |
| MS.gene059685 | MS.gene93196 | 0.816813 | 4.56E-52 | -1.69E-46 |
| MS.gene059718 | MS.gene93196 | -0.816073 | 6.67E-52 | -1.69E-46 |
| MS.gene059865 | MS.gene93196 | -0.850329 | 1.82E-60 | -1.69E-46 |
| MS.gene059953 | MS.gene93196 | 0.820609 | 6.27E-53 | -1.69E-46 |
| MS.gene059955 | MS.gene93196 | 0.829822 | 4.15E-55 | -1.69E-46 |
| MS.gene06000 | MS.gene93196 | -0.844208 | 8.72E-59 | -1.69E-46 |
| MS.gene06027 | MS.gene93196 | -0.807844 | 4.14E-50 | -1.69E-46 |
| MS.gene060405 | MS.gene93196 | 0.830926 | 2.23E-55 | -1.69E-46 |
| MS.gene060593 | MS.gene93196 | 0.81765 | 2.95E-52 | -1.69E-46 |
| MS.gene060762 | MS.gene93196 | -0.843219 | 1.60E-58 | -1.69E-46 |
| MS.gene060778 | MS.gene93196 | -0.814079 | 1.85E-51 | -1.69E-46 |
| MS.gene06077 | MS.gene93196 | -0.825953 | 3.54E-54 | -1.69E-46 |
| MS.gene060823 | MS.gene93196 | 0.841807 | 3.80E-58 | -1.69E-46 |
| MS.gene06084 | MS.gene93196 | 0.81464 | 1.39E-51 | -1.69E-46 |
| MS.gene060982 | MS.gene93196 | -0.858458 | 8.12E-63 | -1.69E-46 |
| MS.gene061044 | MS.gene93196 | 0.85563 | 5.55E-62 | -1.69E-46 |
| MS.gene061150 | MS.gene93196 | -0.819077 | 1.40E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93196.t1 | MTR_1g030275 | 82.464 | 211 | 36 | 1 | 1 | 211 | 4 | 213 | 4.49e-125 | 359 |
| MS.gene93196.t1 | MTR_1g030268 | 83.491 | 212 | 33 | 2 | 1 | 211 | 4 | 214 | 1.52e-124 | 356 |
| MS.gene93196.t1 | MTR_1g030268 | 83.491 | 212 | 33 | 2 | 1 | 211 | 4 | 214 | 1.18e-123 | 356 |
| MS.gene93196.t1 | MTR_1g030230 | 80.569 | 211 | 36 | 2 | 1 | 211 | 1 | 206 | 1.20e-114 | 333 |
| MS.gene93196.t1 | MTR_1g030220 | 67.476 | 206 | 63 | 3 | 9 | 211 | 10 | 214 | 1.19e-91 | 275 |
| MS.gene93196.t1 | MTR_7g087190 | 54.950 | 202 | 91 | 0 | 10 | 211 | 17 | 218 | 1.37e-77 | 239 |
| MS.gene93196.t1 | MTR_1g030265 | 90.625 | 128 | 11 | 1 | 84 | 211 | 53 | 179 | 2.44e-76 | 234 |
| MS.gene93196.t1 | MTR_1g030340 | 59.223 | 206 | 82 | 2 | 9 | 213 | 15 | 219 | 9.95e-76 | 234 |
| MS.gene93196.t1 | MTR_8g089805 | 56.000 | 200 | 87 | 1 | 12 | 211 | 16 | 214 | 7.25e-74 | 229 |
| MS.gene93196.t1 | MTR_7g033165 | 50.000 | 186 | 89 | 3 | 28 | 211 | 25 | 208 | 4.89e-57 | 184 |
| MS.gene93196.t1 | MTR_7g033165 | 50.000 | 186 | 89 | 3 | 28 | 211 | 25 | 208 | 2.66e-56 | 184 |
| MS.gene93196.t1 | MTR_1g030262 | 84.536 | 97 | 10 | 1 | 1 | 92 | 1 | 97 | 3.04e-52 | 164 |
| MS.gene93196.t1 | MTR_8g028160 | 40.598 | 234 | 132 | 2 | 1 | 228 | 1 | 233 | 1.13e-49 | 167 |
| MS.gene93196.t1 | MTR_7g116870 | 43.689 | 206 | 106 | 4 | 10 | 213 | 7 | 204 | 4.80e-48 | 162 |
| MS.gene93196.t1 | MTR_6g007090 | 39.726 | 219 | 117 | 3 | 1 | 213 | 4 | 213 | 1.26e-46 | 159 |
| MS.gene93196.t1 | MTR_7g113860 | 47.917 | 192 | 91 | 5 | 25 | 213 | 18 | 203 | 6.67e-45 | 154 |
| MS.gene93196.t1 | MTR_1g082390 | 44.878 | 205 | 102 | 7 | 12 | 213 | 7 | 203 | 2.85e-43 | 149 |
| MS.gene93196.t1 | MTR_7g033155 | 40.704 | 199 | 102 | 3 | 28 | 213 | 30 | 225 | 1.41e-42 | 149 |
| MS.gene93196.t1 | MTR_7g113860 | 42.718 | 206 | 107 | 6 | 12 | 213 | 11 | 209 | 5.02e-42 | 147 |
| MS.gene93196.t1 | MTR_8g089805 | 56.693 | 127 | 54 | 1 | 85 | 211 | 21 | 146 | 5.76e-42 | 145 |
| MS.gene93196.t1 | MTR_7g033150 | 37.981 | 208 | 120 | 4 | 12 | 213 | 7 | 211 | 2.10e-41 | 145 |
| MS.gene93196.t1 | MTR_6g007095 | 38.839 | 224 | 111 | 5 | 7 | 213 | 1 | 215 | 6.64e-40 | 145 |
| MS.gene93196.t1 | MTR_6g007095 | 40.341 | 176 | 90 | 4 | 44 | 213 | 378 | 544 | 2.38e-31 | 121 |
| MS.gene93196.t1 | MTR_6g007100 | 42.021 | 188 | 98 | 4 | 28 | 213 | 25 | 203 | 1.07e-39 | 140 |
| MS.gene93196.t1 | MTR_8g038680 | 40.465 | 215 | 109 | 6 | 7 | 213 | 1 | 204 | 3.26e-39 | 139 |
| MS.gene93196.t1 | MTR_8g012540 | 40.000 | 215 | 110 | 7 | 7 | 213 | 1 | 204 | 3.49e-39 | 138 |
| MS.gene93196.t1 | MTR_7g111780 | 40.838 | 191 | 89 | 7 | 21 | 209 | 30 | 198 | 1.66e-33 | 124 |
| MS.gene93196.t1 | MTR_7g113860 | 44.776 | 134 | 66 | 4 | 82 | 213 | 8 | 135 | 1.70e-22 | 93.6 |
| MS.gene93196.t1 | MTR_2g015650 | 38.144 | 194 | 96 | 10 | 34 | 215 | 29 | 210 | 2.87e-22 | 94.0 |
| MS.gene93196.t1 | MTR_0029s0100 | 32.338 | 201 | 114 | 8 | 34 | 227 | 28 | 213 | 1.77e-20 | 89.0 |
| MS.gene93196.t1 | MTR_2g043980 | 37.561 | 205 | 87 | 10 | 34 | 226 | 32 | 207 | 2.02e-20 | 88.6 |
| MS.gene93196.t1 | MTR_2g079090 | 33.708 | 178 | 100 | 7 | 34 | 204 | 28 | 194 | 4.49e-20 | 87.8 |
| MS.gene93196.t1 | MTR_0029s0050 | 31.841 | 201 | 115 | 8 | 34 | 227 | 28 | 213 | 6.62e-20 | 87.4 |
| MS.gene93196.t1 | MTR_2g015590 | 34.184 | 196 | 111 | 5 | 28 | 214 | 24 | 210 | 7.77e-20 | 87.0 |
| MS.gene93196.t1 | MTR_2g015590 | 34.184 | 196 | 111 | 5 | 28 | 214 | 24 | 210 | 1.50e-19 | 86.3 |
| MS.gene93196.t1 | MTR_2g015670 | 35.079 | 191 | 92 | 8 | 34 | 215 | 29 | 196 | 1.96e-19 | 85.9 |
| MS.gene93196.t1 | MTR_3g463930 | 32.512 | 203 | 120 | 9 | 34 | 227 | 42 | 236 | 2.48e-19 | 85.9 |
| MS.gene93196.t1 | MTR_3g069780 | 35.294 | 204 | 104 | 10 | 34 | 227 | 28 | 213 | 3.05e-19 | 85.5 |
| MS.gene93196.t1 | MTR_3g438030 | 35.784 | 204 | 103 | 10 | 34 | 227 | 28 | 213 | 3.40e-19 | 85.5 |
| MS.gene93196.t1 | MTR_2g079080 | 33.146 | 178 | 101 | 7 | 34 | 204 | 28 | 194 | 4.01e-19 | 85.1 |
| MS.gene93196.t1 | MTR_3g448360 | 34.804 | 204 | 106 | 8 | 34 | 227 | 27 | 213 | 4.86e-19 | 85.1 |
| MS.gene93196.t1 | MTR_3g069520 | 34.146 | 205 | 113 | 7 | 34 | 232 | 28 | 216 | 7.62e-19 | 84.3 |
| MS.gene93196.t1 | MTR_3g463960 | 33.495 | 206 | 107 | 11 | 34 | 227 | 42 | 229 | 8.09e-19 | 84.3 |
| MS.gene93196.t1 | MTR_3g463950 | 33.495 | 206 | 107 | 11 | 34 | 227 | 42 | 229 | 8.09e-19 | 84.3 |
| MS.gene93196.t1 | MTR_3g463970 | 33.495 | 206 | 107 | 11 | 34 | 227 | 42 | 229 | 8.09e-19 | 84.3 |
| MS.gene93196.t1 | MTR_3g463940 | 33.495 | 206 | 107 | 11 | 34 | 227 | 42 | 229 | 8.09e-19 | 84.3 |
| MS.gene93196.t1 | MTR_2g015580 | 29.864 | 221 | 131 | 7 | 8 | 214 | 18 | 228 | 1.05e-18 | 84.3 |
| MS.gene93196.t1 | MTR_4g104240 | 33.023 | 215 | 117 | 10 | 34 | 230 | 37 | 242 | 1.02e-17 | 81.3 |
| MS.gene93196.t1 | MTR_2g043990 | 39.752 | 161 | 74 | 8 | 34 | 184 | 94 | 241 | 1.33e-17 | 80.5 |
| MS.gene93196.t1 | MTR_1g082410 | 30.734 | 218 | 100 | 9 | 12 | 206 | 6 | 195 | 2.50e-16 | 76.6 |
| MS.gene93196.t1 | MTR_8g022810 | 34.177 | 158 | 84 | 6 | 59 | 211 | 69 | 211 | 4.55e-16 | 76.3 |
| MS.gene93196.t1 | MTR_8g022810 | 34.177 | 158 | 84 | 6 | 59 | 211 | 69 | 211 | 4.91e-16 | 76.6 |
| MS.gene93196.t1 | MTR_8g031430 | 33.766 | 154 | 86 | 4 | 60 | 213 | 66 | 203 | 7.15e-16 | 75.9 |
| MS.gene93196.t1 | MTR_8g031400 | 34.254 | 181 | 98 | 6 | 36 | 211 | 37 | 201 | 1.60e-14 | 72.0 |
| MS.gene93196.t1 | MTR_2g044100 | 32.121 | 165 | 92 | 8 | 36 | 194 | 43 | 193 | 7.04e-14 | 70.5 |
| MS.gene93196.t1 | MTR_8g031420 | 28.365 | 208 | 123 | 6 | 14 | 208 | 9 | 203 | 1.35e-13 | 69.3 |
| MS.gene93196.t1 | MTR_8g031390 | 32.026 | 153 | 86 | 6 | 60 | 208 | 66 | 204 | 2.83e-13 | 68.2 |
| MS.gene93196.t1 | MTR_8g031390 | 32.026 | 153 | 86 | 6 | 60 | 208 | 66 | 204 | 3.82e-13 | 68.2 |
| MS.gene93196.t1 | MTR_8g014910 | 30.928 | 194 | 105 | 9 | 35 | 213 | 31 | 210 | 9.79e-12 | 63.9 |
| MS.gene93196.t1 | MTR_5g084770 | 29.091 | 220 | 120 | 11 | 10 | 210 | 1 | 203 | 1.88e-11 | 63.2 |
| MS.gene93196.t1 | MTR_2g015630 | 29.379 | 177 | 101 | 6 | 41 | 203 | 36 | 202 | 2.25e-11 | 63.2 |
| MS.gene93196.t1 | MTR_4g056160 | 31.579 | 171 | 94 | 7 | 35 | 196 | 26 | 182 | 4.02e-11 | 62.0 |
| MS.gene93196.t1 | MTR_5g084750 | 27.907 | 215 | 123 | 10 | 12 | 213 | 13 | 208 | 5.49e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93196.t1 | AT3G26430 | 57.732 | 194 | 81 | 1 | 9 | 202 | 4 | 196 | 5.55e-76 | 234 |
| MS.gene93196.t1 | AT1G67830 | 59.444 | 180 | 72 | 1 | 32 | 211 | 26 | 204 | 3.27e-73 | 227 |
| MS.gene93196.t1 | AT5G14450 | 47.087 | 206 | 91 | 4 | 15 | 211 | 20 | 216 | 8.23e-57 | 185 |
| MS.gene93196.t1 | AT3G27950 | 49.524 | 210 | 86 | 7 | 13 | 213 | 8 | 206 | 6.06e-53 | 175 |
| MS.gene93196.t1 | AT4G01130 | 44.279 | 201 | 104 | 5 | 14 | 211 | 12 | 207 | 4.66e-47 | 159 |
| MS.gene93196.t1 | AT4G01130 | 44.279 | 201 | 104 | 5 | 14 | 211 | 12 | 207 | 3.29e-46 | 157 |
| MS.gene93196.t1 | AT1G54790 | 48.087 | 183 | 86 | 7 | 34 | 213 | 30 | 206 | 7.00e-43 | 149 |
| MS.gene93196.t1 | AT1G54790 | 44.279 | 201 | 103 | 7 | 16 | 213 | 11 | 205 | 5.92e-41 | 144 |
| MS.gene93196.t1 | AT1G54790 | 44.279 | 201 | 103 | 7 | 16 | 213 | 11 | 205 | 7.15e-41 | 144 |
| MS.gene93196.t1 | AT3G05180 | 45.652 | 184 | 91 | 4 | 33 | 213 | 33 | 210 | 6.40e-38 | 136 |
| MS.gene93196.t1 | AT1G56670 | 40.777 | 206 | 109 | 6 | 10 | 213 | 16 | 210 | 1.16e-36 | 130 |
| MS.gene93196.t1 | AT1G09390 | 37.500 | 216 | 123 | 5 | 1 | 213 | 1 | 207 | 2.89e-36 | 131 |
| MS.gene93196.t1 | AT1G56670 | 40.777 | 206 | 109 | 6 | 10 | 213 | 16 | 210 | 7.37e-36 | 130 |
| MS.gene93196.t1 | AT3G62280 | 40.698 | 172 | 85 | 7 | 35 | 203 | 35 | 192 | 9.71e-29 | 110 |
| MS.gene93196.t1 | AT3G62280 | 40.698 | 172 | 85 | 7 | 35 | 203 | 35 | 192 | 4.06e-28 | 109 |
| MS.gene93196.t1 | AT5G45910 | 33.491 | 212 | 115 | 6 | 34 | 232 | 28 | 226 | 3.00e-23 | 96.7 |
| MS.gene93196.t1 | AT1G28650 | 35.545 | 211 | 106 | 8 | 11 | 204 | 9 | 206 | 6.97e-23 | 95.9 |
| MS.gene93196.t1 | AT1G28600 | 35.211 | 213 | 112 | 8 | 1 | 203 | 1 | 197 | 1.05e-22 | 92.4 |
| MS.gene93196.t1 | AT1G31550 | 36.126 | 191 | 103 | 6 | 33 | 214 | 33 | 213 | 1.81e-22 | 94.7 |
| MS.gene93196.t1 | AT1G31550 | 36.126 | 191 | 103 | 6 | 33 | 214 | 33 | 213 | 2.10e-22 | 94.7 |
| MS.gene93196.t1 | AT1G28570 | 34.101 | 217 | 121 | 7 | 10 | 214 | 6 | 212 | 2.13e-22 | 94.7 |
| MS.gene93196.t1 | AT1G28610 | 34.742 | 213 | 113 | 8 | 1 | 203 | 1 | 197 | 2.14e-22 | 92.4 |
| MS.gene93196.t1 | AT1G28670 | 37.073 | 205 | 109 | 7 | 12 | 204 | 8 | 204 | 2.67e-22 | 94.4 |
| MS.gene93196.t1 | AT1G28600 | 34.375 | 224 | 121 | 8 | 1 | 214 | 1 | 208 | 3.78e-22 | 94.0 |
| MS.gene93196.t1 | AT1G28590 | 33.188 | 229 | 125 | 6 | 1 | 215 | 1 | 215 | 5.16e-22 | 93.6 |
| MS.gene93196.t1 | AT1G28610 | 34.375 | 224 | 121 | 8 | 1 | 214 | 1 | 208 | 1.95e-21 | 91.7 |
| MS.gene93196.t1 | AT1G28580 | 33.028 | 218 | 120 | 7 | 12 | 214 | 9 | 215 | 3.37e-21 | 91.3 |
| MS.gene93196.t1 | AT1G28640 | 35.407 | 209 | 106 | 8 | 12 | 204 | 8 | 203 | 3.58e-21 | 91.3 |
| MS.gene93196.t1 | AT2G27360 | 34.518 | 197 | 108 | 7 | 29 | 214 | 26 | 212 | 4.34e-19 | 85.5 |
| MS.gene93196.t1 | AT4G01130 | 38.889 | 126 | 69 | 5 | 89 | 211 | 1 | 121 | 1.00e-18 | 83.2 |
| MS.gene93196.t1 | AT1G28660 | 40.816 | 147 | 74 | 6 | 12 | 146 | 8 | 153 | 6.64e-18 | 82.0 |
| MS.gene93196.t1 | AT1G28660 | 40.816 | 147 | 74 | 6 | 12 | 146 | 8 | 153 | 7.94e-18 | 81.6 |
| MS.gene93196.t1 | AT3G48460 | 39.655 | 116 | 58 | 3 | 13 | 116 | 15 | 130 | 7.67e-15 | 73.2 |
| MS.gene93196.t1 | AT1G53920 | 30.000 | 200 | 119 | 5 | 12 | 203 | 22 | 208 | 4.27e-13 | 68.2 |
| MS.gene93196.t1 | AT1G71120 | 37.168 | 113 | 59 | 3 | 23 | 124 | 18 | 129 | 1.11e-12 | 66.6 |
| MS.gene93196.t1 | AT5G08460 | 32.258 | 155 | 86 | 6 | 34 | 181 | 47 | 189 | 2.67e-12 | 65.9 |
| MS.gene93196.t1 | AT5G40990 | 31.928 | 166 | 93 | 5 | 36 | 194 | 37 | 189 | 7.07e-12 | 64.7 |
| MS.gene93196.t1 | AT3G14225 | 34.969 | 163 | 86 | 5 | 36 | 191 | 37 | 186 | 1.75e-11 | 63.5 |
| MS.gene93196.t1 | AT4G10950 | 36.522 | 115 | 63 | 5 | 35 | 143 | 70 | 180 | 5.15e-11 | 62.0 |
| MS.gene93196.t1 | AT3G14225 | 34.756 | 164 | 89 | 6 | 36 | 191 | 37 | 190 | 7.54e-11 | 61.6 |
| MS.gene93196.t1 | AT1G53940 | 31.343 | 201 | 108 | 7 | 11 | 194 | 4 | 191 | 8.53e-11 | 60.8 |
Find 43 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTCTTTGTAGCAAATAT+TGG | 0.178924 | 1.3:-16011785 | None:intergenic |
| TATAAAATTCTTTACTATAT+CGG | 0.215235 | 1.3:-16016227 | None:intergenic |
| ACCAATATCAAATGTGTATA+AGG | 0.220968 | 1.3:-16016140 | None:intergenic |
| TTTGGAATAATAATCTTCTT+TGG | 0.255011 | 1.3:-16016116 | None:intergenic |
| TACTGAACCTGAAGGGAAAA+TGG | 0.271054 | 1.3:-16015896 | None:intergenic |
| AATTCTTTGTAGCAAATATT+GGG | 0.277876 | 1.3:-16011784 | None:intergenic |
| TTGGAATAATAATCTTCTTT+GGG | 0.286703 | 1.3:-16016115 | None:intergenic |
| CGAATCATTCTTGATTTCAT+AGG | 0.296923 | 1.3:+16011941 | MS.gene93196:CDS |
| TACCTAAAACAAGGTTCATT+AGG | 0.300155 | 1.3:+16015939 | MS.gene93196:CDS |
| GCCTTATACACATTTGATAT+TGG | 0.309552 | 1.3:+16016139 | MS.gene93196:CDS |
| AGTCCATATCTTGATTCTCT+TGG | 0.320911 | 1.3:+16015782 | MS.gene93196:CDS |
| ATCAAGATATGGACTTAGAT+AGG | 0.323465 | 1.3:-16015774 | None:intergenic |
| ATCAAATGTGTATAAGGCTT+TGG | 0.373582 | 1.3:-16016134 | None:intergenic |
| ATAAAATTCTTTACTATATC+GGG | 0.374442 | 1.3:-16016226 | None:intergenic |
| AAACTCTGATACTGGTGGTT+TGG | 0.401156 | 1.3:+16011841 | MS.gene93196:CDS |
| ACCTAAAACAAGGTTCATTA+GGG | 0.406556 | 1.3:+16015940 | MS.gene93196:CDS |
| CGAGCACTGCCGTTACCATA+TGG | 0.418623 | 1.3:+16011875 | MS.gene93196:CDS |
| GTCCATATCTTGATTCTCTT+GGG | 0.422681 | 1.3:+16015783 | MS.gene93196:CDS |
| GGTCAAAATGATCTTACTGC+TGG | 0.466959 | 1.3:+16016160 | MS.gene93196:CDS |
| ACAAGGTTCATTAGGGATCA+AGG | 0.468253 | 1.3:+16015947 | MS.gene93196:CDS |
| GGTGCTTCAAACTCTGATAC+TGG | 0.485062 | 1.3:+16011833 | MS.gene93196:CDS |
| TACAACTATAACATTAGTGC+TGG | 0.500660 | 1.3:+16016921 | MS.gene93196:CDS |
| CTAGGTATGATATTACTAGT+AGG | 0.500699 | 1.3:-16015860 | None:intergenic |
| GGTGCAAACTTTGCAACAGC+AGG | 0.502492 | 1.3:+16015821 | MS.gene93196:CDS |
| CTAGTGGCTTGTTGTGGCAA+TGG | 0.508528 | 1.3:+16016891 | MS.gene93196:intron |
| GACCCAAGAGAATCAAGATA+TGG | 0.518864 | 1.3:-16015785 | None:intergenic |
| TATAACATTAGTGCTGGCTG+TGG | 0.541420 | 1.3:+16016927 | MS.gene93196:CDS |
| ATTCTTTGTAGCAAATATTG+GGG | 0.543366 | 1.3:-16011783 | None:intergenic |
| TGGTAACGGCAGTGCTCGAA+AGG | 0.543397 | 1.3:-16011870 | None:intergenic |
| TCAAGATATGGACTTAGATA+GGG | 0.548964 | 1.3:-16015773 | None:intergenic |
| TGGAATAATAATCTTCTTTG+GGG | 0.555591 | 1.3:-16016114 | None:intergenic |
| CTTGGGTCAAACTTCACACA+TGG | 0.560034 | 1.3:+16015800 | MS.gene93196:CDS |
| CTTCCACTAGTGGCTTGTTG+TGG | 0.588534 | 1.3:+16016885 | MS.gene93196:intron |
| AAAGTCTCACCATATGGTAA+CGG | 0.600481 | 1.3:-16011884 | None:intergenic |
| AAGATTTCATACCTAAAACA+AGG | 0.612054 | 1.3:+16015930 | MS.gene93196:CDS |
| GTGCAAACTTTGCAACAGCA+GGG | 0.631688 | 1.3:+16015822 | MS.gene93196:CDS |
| GCTTCAAACTCTGATACTGG+TGG | 0.645496 | 1.3:+16011836 | MS.gene93196:CDS |
| TTCTTTGTAGCAAATATTGG+GGG | 0.645637 | 1.3:-16011782 | None:intergenic |
| ACTAGTAATATCATACCTAG+TGG | 0.650422 | 1.3:+16015863 | MS.gene93196:CDS |
| AATGGACTAAACATTCCACT+AGG | 0.660611 | 1.3:-16015878 | None:intergenic |
| TTGAATGTACTGAACCTGAA+GGG | 0.661770 | 1.3:-16015903 | None:intergenic |
| GTGGCTTGTTGTGGCAATGG+AGG | 0.663762 | 1.3:+16016894 | MS.gene93196:intron |
| ATTGAATGTACTGAACCTGA+AGG | 0.669376 | 1.3:-16015904 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATAAATAAGGATAATA+TGG | - | chr1.3:16014082-16014101 | None:intergenic | 10.0% |
| !! | CCTAATAAAATTAATAAATA+AGG | + | chr1.3:16015012-16015031 | MS.gene93196:intron | 10.0% |
| !! | CCTAATAAAATTAATAAATA+AGG | - | chr1.3:16015031-16015012 | None:intergenic | 10.0% |
| !! | TATAAAATTCTTTACTATAT+CGG | - | chr1.3:16016230-16016249 | None:intergenic | 10.0% |
| !! | TATATCTATACTATATATAA+AGG | + | chr1.3:16012972-16012991 | MS.gene93196:intron | 10.0% |
| !! | TTAAAATGAATTTAAATATG+AGG | - | chr1.3:16015492-16015511 | None:intergenic | 10.0% |
| !! | TTTAATAAATGGTTTAAAAA+TGG | + | chr1.3:16013711-16013730 | MS.gene93196:intron | 10.0% |
| !!! | AATTATTTCTATATTTATGA+AGG | + | chr1.3:16015702-16015721 | MS.gene93196:intron | 10.0% |
| !!! | ATTACTTGTATTTAAAATTA+AGG | - | chr1.3:16013050-16013069 | None:intergenic | 10.0% |
| !!! | ATTATTTCTATATTTATGAA+GGG | + | chr1.3:16015703-16015722 | MS.gene93196:intron | 10.0% |
| !!! | CCTTATTTATTAATTTTATT+AGG | + | chr1.3:16014088-16014107 | MS.gene93196:intron | 10.0% |
| !!! | CCTTATTTATTAATTTTATT+AGG | - | chr1.3:16014107-16014088 | None:intergenic | 10.0% |
| !!! | GTATTTTTTTTATGAAATTT+TGG | - | chr1.3:16013318-16013337 | None:intergenic | 10.0% |
| !!! | TATAAGAGTATTAATTAATT+CGG | + | chr1.3:16013671-16013690 | MS.gene93196:intron | 10.0% |
| !!! | TTACTTGTATTTAAAATTAA+GGG | - | chr1.3:16013049-16013068 | None:intergenic | 10.0% |
| !!! | TTAGGTTTATTAATTTTATT+AGG | - | chr1.3:16014997-16015016 | None:intergenic | 10.0% |
| !! | AAATAAGGATAACAAATAAT+AGG | + | chr1.3:16015027-16015046 | MS.gene93196:intron | 15.0% |
| !! | AATAAGGATAACAAATAATA+GGG | + | chr1.3:16015028-16015047 | MS.gene93196:intron | 15.0% |
| !! | AATATTTCATATGAATTTCA+GGG | - | chr1.3:16015592-16015611 | None:intergenic | 15.0% |
| !! | ATAAAATTCTTTACTATATC+GGG | - | chr1.3:16016229-16016248 | None:intergenic | 15.0% |
| !! | CATATAATATCATATGTATT+AGG | - | chr1.3:16012895-16012914 | None:intergenic | 15.0% |
| !! | GATTTCAAACAATAATAATA+TGG | + | chr1.3:16014506-16014525 | MS.gene93196:intron | 15.0% |
| !! | TAATATGGATCTTTAATAAA+TGG | + | chr1.3:16013700-16013719 | MS.gene93196:intron | 15.0% |
| !! | TAATTTAGAGGAAAATTATT+AGG | + | chr1.3:16014956-16014975 | MS.gene93196:intron | 15.0% |
| !!! | AAATTGTTTAAGAGTATAAT+TGG | - | chr1.3:16013221-16013240 | None:intergenic | 15.0% |
| !!! | ATATTTCAATTTAAAGTTGA+AGG | + | chr1.3:16016574-16016593 | MS.gene93196:intron | 15.0% |
| !!! | CATTTTAGAGAAAAATTATT+AGG | - | chr1.3:16014129-16014148 | None:intergenic | 15.0% |
| !!! | GTAAATTTTGAAATTAAGAA+AGG | - | chr1.3:16016065-16016084 | None:intergenic | 15.0% |
| !!! | TATATTTTTGTTGAGATTTA+AGG | - | chr1.3:16013925-16013944 | None:intergenic | 15.0% |
| !!! | TCAATTGATTTTATCTTTAT+TGG | - | chr1.3:16015286-16015305 | None:intergenic | 15.0% |
| !!! | TTTAAAATTAAGGGTATTTT+TGG | - | chr1.3:16013040-16013059 | None:intergenic | 15.0% |
| !! | AAAATAGGATCAATTTGATT+TGG | - | chr1.3:16016707-16016726 | None:intergenic | 20.0% |
| !! | AATTCTTTGTAGCAAATATT+GGG | - | chr1.3:16011787-16011806 | None:intergenic | 20.0% |
| !! | CACCTATTATGATTATTATT+AGG | - | chr1.3:16013858-16013877 | None:intergenic | 20.0% |
| !! | CTATTATGATTATTATTAGG+CGG | - | chr1.3:16013855-16013874 | None:intergenic | 20.0% |
| !! | CTTATTTAATATGTCTAATC+CGG | + | chr1.3:16014609-16014628 | MS.gene93196:intron | 20.0% |
| !! | CTTATTTAATATGTCTAATC+CGG | - | chr1.3:16014628-16014609 | None:intergenic | 20.0% |
| !! | GAATATTTCATATGAATTTC+AGG | - | chr1.3:16015593-16015612 | None:intergenic | 20.0% |
| !! | TAAATCTTCATTAACATGTA+GGG | + | chr1.3:16016856-16016875 | MS.gene93196:intron | 20.0% |
| !! | TAATAATTAGGTTAGAGATT+CGG | + | chr1.3:16013947-16013966 | MS.gene93196:intron | 20.0% |
| !! | TCATAGAAAATGAAATAGAA+AGG | - | chr1.3:16011986-16012005 | None:intergenic | 20.0% |
| !! | TGAAATTAAGAAAGGAAAAA+AGG | - | chr1.3:16016057-16016076 | None:intergenic | 20.0% |
| !! | TTAAATCTTCATTAACATGT+AGG | + | chr1.3:16016855-16016874 | MS.gene93196:intron | 20.0% |
| !! | TTAATTCGGTTAATCTAATA+TGG | + | chr1.3:16013685-16013704 | MS.gene93196:intron | 20.0% |
| !! | TTATTTAATATGTCTAATCC+GGG | + | chr1.3:16014610-16014629 | MS.gene93196:intron | 20.0% |
| !! | TTATTTAATATGTCTAATCC+GGG | - | chr1.3:16014629-16014610 | None:intergenic | 20.0% |
| !! | TTCCAAAATCCAAAAAAATA+CGG | + | chr1.3:16016677-16016696 | MS.gene93196:intron | 20.0% |
| !! | TTGGAATAATAATCTTCTTT+GGG | - | chr1.3:16016118-16016137 | None:intergenic | 20.0% |
| !! | TTGGACAATAAATAAAAGTT+TGG | + | chr1.3:16012755-16012774 | MS.gene93196:intron | 20.0% |
| !!! | ATCTAGAACATATACAATTT+AGG | + | chr1.3:16016428-16016447 | MS.gene93196:intron | 20.0% |
| !!! | GAATTTTATAGAGAATATCA+AGG | + | chr1.3:16016240-16016259 | MS.gene93196:CDS | 20.0% |
| !!! | TATATTTTTGTTGAGATCTA+AGG | - | chr1.3:16015191-16015210 | None:intergenic | 20.0% |
| !!! | TCTAGAACATATACAATTTA+GGG | + | chr1.3:16016429-16016448 | MS.gene93196:intron | 20.0% |
| !!! | TGTAAACGTATTTTTTTTTG+TGG | - | chr1.3:16014387-16014406 | None:intergenic | 20.0% |
| !!! | TTTGGAATAATAATCTTCTT+TGG | - | chr1.3:16016119-16016138 | None:intergenic | 20.0% |
| ! | AAGATTTCATACCTAAAACA+AGG | + | chr1.3:16015930-16015949 | MS.gene93196:CDS | 25.0% |
| ! | AATTTCAAAATTTACTTGCC+AGG | + | chr1.3:16016070-16016089 | MS.gene93196:intron | 25.0% |
| ! | ACCAATATCAAATGTGTATA+AGG | - | chr1.3:16016143-16016162 | None:intergenic | 25.0% |
| ! | AGTTATAAGTTAACTCATGT+AGG | + | chr1.3:16012367-16012386 | MS.gene93196:intron | 25.0% |
| ! | ATAATGAATCTCATACAACT+TGG | + | chr1.3:16013511-16013530 | MS.gene93196:intron | 25.0% |
| ! | ATATACCCTAACTTGAAAAT+AGG | - | chr1.3:16016722-16016741 | None:intergenic | 25.0% |
| ! | ATGTTTCTCTCTAAATCTAA+TGG | + | chr1.3:16013553-16013572 | MS.gene93196:intron | 25.0% |
| ! | ATTACTAAAATGCAACTTAC+TGG | + | chr1.3:16016403-16016422 | MS.gene93196:intron | 25.0% |
| ! | ATTCTTTGTAGCAAATATTG+GGG | - | chr1.3:16011786-16011805 | None:intergenic | 25.0% |
| ! | CAAGTTAGGGTATATATATT+TGG | + | chr1.3:16016727-16016746 | MS.gene93196:intron | 25.0% |
| ! | CAATTCTTTGTAGCAAATAT+TGG | - | chr1.3:16011788-16011807 | None:intergenic | 25.0% |
| ! | CGCCTAATAATAATCATAAT+AGG | + | chr1.3:16013853-16013872 | MS.gene93196:intron | 25.0% |
| ! | CTAGAACATATACAATTTAG+GGG | + | chr1.3:16016430-16016449 | MS.gene93196:intron | 25.0% |
| ! | GTGGTTTAACTCAAAAATAA+TGG | - | chr1.3:16012920-16012939 | None:intergenic | 25.0% |
| ! | TAGATAAAGTTAGCAGAAAA+GGG | - | chr1.3:16016276-16016295 | None:intergenic | 25.0% |
| ! | TCGTGTATTGAATATTGATA+AGG | - | chr1.3:16012852-16012871 | None:intergenic | 25.0% |
| ! | TGGAATAATAATCTTCTTTG+GGG | - | chr1.3:16016117-16016136 | None:intergenic | 25.0% |
| !! | AGTCTAACAATTCTTTTCAA+AGG | + | chr1.3:16012944-16012963 | MS.gene93196:intron | 25.0% |
| !! | ATCTTTTAACCAAGAAAACA+CGG | + | chr1.3:16014670-16014689 | MS.gene93196:intron | 25.0% |
| !! | ATCTTTTAACCAAGAAAACA+CGG | - | chr1.3:16014689-16014670 | None:intergenic | 25.0% |
| !! | CGGATTAGACATATTAAATA+AGG | + | chr1.3:16013977-16013996 | MS.gene93196:intron | 25.0% |
| !! | CGGATTAGACATATTAAATA+AGG | - | chr1.3:16013996-16013977 | None:intergenic | 25.0% |
| !! | TTTATTGTGTTGAACACTTT+TGG | + | chr1.3:16012019-16012038 | MS.gene93196:intron | 25.0% |
| !!! | AAACGTATTTTTTTTTGTGG+TGG | - | chr1.3:16014384-16014403 | None:intergenic | 25.0% |
| !!! | ACTTTTTTCAATAGATCATC+TGG | + | chr1.3:16011902-16011921 | MS.gene93196:CDS | 25.0% |
| !!! | ATTGATCCTATTTTCAAGTT+AGG | + | chr1.3:16016713-16016732 | MS.gene93196:intron | 25.0% |
| !!! | GTATTTTGATCAGTTTGTAT+AGG | + | chr1.3:16012463-16012482 | MS.gene93196:intron | 25.0% |
| !!! | GTGCGATTTTTAAGAAAATA+GGG | - | chr1.3:16012677-16012696 | None:intergenic | 25.0% |
| !!! | TATTTTAGAGGGAATTTGTT+AGG | + | chr1.3:16014908-16014927 | MS.gene93196:intron | 25.0% |
| !!! | TTGATCCTATTTTCAAGTTA+GGG | + | chr1.3:16016714-16016733 | MS.gene93196:intron | 25.0% |
| AACCTAATGCAGTAATTTAG+AGG | + | chr1.3:16014944-16014963 | MS.gene93196:intron | 30.0% | |
| AAGAATTGTTAGACTTAACG+TGG | - | chr1.3:16012939-16012958 | None:intergenic | 30.0% | |
| AATAAAAAGAGCAGAAAGAC+GGG | + | chr1.3:16013364-16013383 | MS.gene93196:intron | 30.0% | |
| ACCTAAAACAAGGTTCATTA+GGG | + | chr1.3:16015940-16015959 | MS.gene93196:CDS | 30.0% | |
| ACTAGTAATATCATACCTAG+TGG | + | chr1.3:16015863-16015882 | MS.gene93196:CDS | 30.0% | |
| ATCAAATGTGTATAAGGCTT+TGG | - | chr1.3:16016137-16016156 | None:intergenic | 30.0% | |
| ATCAAGATATGGACTTAGAT+AGG | - | chr1.3:16015777-16015796 | None:intergenic | 30.0% | |
| ATCAGTGAGGAGAAATATTA+GGG | + | chr1.3:16014878-16014897 | MS.gene93196:intron | 30.0% | |
| ATTTCATATGAATTTCAGGG+TGG | - | chr1.3:16015589-16015608 | None:intergenic | 30.0% | |
| CAATAAAAAGAGCAGAAAGA+CGG | + | chr1.3:16013363-16013382 | MS.gene93196:intron | 30.0% | |
| CGAATCATTCTTGATTTCAT+AGG | + | chr1.3:16011941-16011960 | MS.gene93196:CDS | 30.0% | |
| CTAGGTATGATATTACTAGT+AGG | - | chr1.3:16015863-16015882 | None:intergenic | 30.0% | |
| CTATATAGTGTGATGTAGAT+GGG | - | chr1.3:16015655-16015674 | None:intergenic | 30.0% | |
| CTGAGTTTGCATAGAAATTA+GGG | - | chr1.3:16014419-16014438 | None:intergenic | 30.0% | |
| CTTTATAGCAGATGGAAAAT+TGG | - | chr1.3:16016513-16016532 | None:intergenic | 30.0% | |
| GACAATGCATAAAATATGCA+AGG | + | chr1.3:16014339-16014358 | MS.gene93196:intron | 30.0% | |
| GCCTTATACACATTTGATAT+TGG | + | chr1.3:16016139-16016158 | MS.gene93196:CDS | 30.0% | |
| GGAAAATTGGCCAAAATTAA+AGG | - | chr1.3:16016500-16016519 | None:intergenic | 30.0% | |
| GGATTCTCAAACAAAAGAAA+TGG | - | chr1.3:16012523-16012542 | None:intergenic | 30.0% | |
| GGGTATATATATTTGGATTG+CGG | + | chr1.3:16016734-16016753 | MS.gene93196:intron | 30.0% | |
| GTAGATAAAGTTAGCAGAAA+AGG | - | chr1.3:16016277-16016296 | None:intergenic | 30.0% | |
| TAACTATCCTTTATAGCAGA+TGG | - | chr1.3:16016521-16016540 | None:intergenic | 30.0% | |
| TAATATTTCTCCTCACTGAT+GGG | - | chr1.3:16014878-16014897 | None:intergenic | 30.0% | |
| TACAACTATAACATTAGTGC+TGG | + | chr1.3:16016921-16016940 | MS.gene93196:CDS | 30.0% | |
| TACCTAAAACAAGGTTCATT+AGG | + | chr1.3:16015939-16015958 | MS.gene93196:CDS | 30.0% | |
| TATATATAGCTGAGTTTGCA+TGG | + | chr1.3:16014705-16014724 | MS.gene93196:intron | 30.0% | |
| TCAAGATATGGACTTAGATA+GGG | - | chr1.3:16015776-16015795 | None:intergenic | 30.0% | |
| TCCAAGTTGTATAACAATTG+TGG | - | chr1.3:16013582-16013601 | None:intergenic | 30.0% | |
| TCCACAATTGTTATACAACT+TGG | + | chr1.3:16013578-16013597 | MS.gene93196:intron | 30.0% | |
| TCTAAATCTGATTATCTCCA+CGG | - | chr1.3:16012145-16012164 | None:intergenic | 30.0% | |
| TCTGCTATAAAGGATAGTTA+TGG | + | chr1.3:16016521-16016540 | MS.gene93196:intron | 30.0% | |
| TTCCTCTAAATTACTGCATT+AGG | - | chr1.3:16014949-16014968 | None:intergenic | 30.0% | |
| TTCTTTGTAGCAAATATTGG+GGG | - | chr1.3:16011785-16011804 | None:intergenic | 30.0% | |
| TTGAAAAAAGTCTCACCATA+TGG | - | chr1.3:16011893-16011912 | None:intergenic | 30.0% | |
| TTTAAGAAAATAGGGAGTGA+AGG | - | chr1.3:16012669-16012688 | None:intergenic | 30.0% | |
| TTTCTTAAAAATCGCACGTT+CGG | + | chr1.3:16012680-16012699 | MS.gene93196:intron | 30.0% | |
| TTTGTGTCCTTAATTAAGCT+CGG | - | chr1.3:16016030-16016049 | None:intergenic | 30.0% | |
| ! | ACTCATTTCAGCACATTTTT+GGG | + | chr1.3:16013000-16013019 | MS.gene93196:intron | 30.0% |
| ! | ATTAAAGGTACACATCCAAT+TGG | - | chr1.3:16016485-16016504 | None:intergenic | 30.0% |
| ! | CAATTTTCCATCTGCTATAA+AGG | + | chr1.3:16016511-16016530 | MS.gene93196:intron | 30.0% |
| ! | GTTTTGTCGTATGAATATGA+AGG | - | chr1.3:16013431-16013450 | None:intergenic | 30.0% |
| ! | TACTCATTTCAGCACATTTT+TGG | + | chr1.3:16012999-16013018 | MS.gene93196:intron | 30.0% |
| ! | TCATTTTGGATACATAACAC+TGG | + | chr1.3:16016458-16016477 | MS.gene93196:intron | 30.0% |
| !! | ATGTTGACTCGCTATAATTA+TGG | + | chr1.3:16016800-16016819 | MS.gene93196:intron | 30.0% |
| !! | CGTGCGATTTTTAAGAAAAT+AGG | - | chr1.3:16012678-16012697 | None:intergenic | 30.0% |
| !! | TGGATGTGTACCTTTAATTT+TGG | + | chr1.3:16016487-16016506 | MS.gene93196:intron | 30.0% |
| !! | TGTTATTGGTTTGCATTCTT+TGG | - | chr1.3:16015630-16015649 | None:intergenic | 30.0% |
| !!! | AGAGATGTGTTTTGATATTC+AGG | - | chr1.3:16015537-16015556 | None:intergenic | 30.0% |
| !!! | CACCGTATTTTTTTGGATTT+TGG | - | chr1.3:16016682-16016701 | None:intergenic | 30.0% |
| !!! | GAGATGTGTTTTGATATTCA+GGG | - | chr1.3:16015536-16015555 | None:intergenic | 30.0% |
| !!! | TTTCCTGCCATTTTTAACTT+CGG | + | chr1.3:16011812-16011831 | MS.gene93196:CDS | 30.0% |
| AAACAACTAGATTAGAGACC+CGG | - | chr1.3:16014647-16014666 | None:intergenic | 35.0% | |
| AAACGATGACACAACATGAA+AGG | + | chr1.3:16014843-16014862 | MS.gene93196:intron | 35.0% | |
| AAAGTCTCACCATATGGTAA+CGG | - | chr1.3:16011887-16011906 | None:intergenic | 35.0% | |
| AACCAAGAAAACACGGTTTA+GGG | + | chr1.3:16014677-16014696 | MS.gene93196:intron | 35.0% | |
| AACCAAGAAAACACGGTTTA+GGG | - | chr1.3:16014696-16014677 | None:intergenic | 35.0% | |
| ACATATACAATTTAGGGGCA+AGG | + | chr1.3:16016435-16016454 | MS.gene93196:intron | 35.0% | |
| ACCAGTGAGGAGAAATATTA+GGG | - | chr1.3:16014159-16014178 | None:intergenic | 35.0% | |
| AGTCCATATCTTGATTCTCT+TGG | + | chr1.3:16015782-16015801 | MS.gene93196:CDS | 35.0% | |
| AGTGTATGATGCAACAATTG+TGG | - | chr1.3:16013649-16013668 | None:intergenic | 35.0% | |
| ATACATAACACTGGACCAAT+TGG | + | chr1.3:16016467-16016486 | MS.gene93196:intron | 35.0% | |
| ATGTACTACTAGCGAAAAGA+TGG | - | chr1.3:16013400-16013419 | None:intergenic | 35.0% | |
| ATTGAATGTACTGAACCTGA+AGG | - | chr1.3:16015907-16015926 | None:intergenic | 35.0% | |
| CAAAACACATCTCTCTATGT+CGG | + | chr1.3:16015543-16015562 | MS.gene93196:intron | 35.0% | |
| CATCAGTGAGGAGAAATATT+AGG | + | chr1.3:16014877-16014896 | MS.gene93196:intron | 35.0% | |
| CCATCTACATCACACTATAT+AGG | + | chr1.3:16015653-16015672 | MS.gene93196:intron | 35.0% | |
| CCTATATAGTGTGATGTAGA+TGG | - | chr1.3:16015656-16015675 | None:intergenic | 35.0% | |
| CTAATATTTCTCCTCACTGA+TGG | - | chr1.3:16014879-16014898 | None:intergenic | 35.0% | |
| CTGAGTTTGCATGGAAATTA+GGG | + | chr1.3:16014714-16014733 | MS.gene93196:intron | 35.0% | |
| GACTTGAATCTCATACAACT+TGG | - | chr1.3:16013499-16013480 | None:intergenic | 35.0% | |
| GCTGAGTTTGCATAGAAATT+AGG | - | chr1.3:16014420-16014439 | None:intergenic | 35.0% | |
| GTCCATATCTTGATTCTCTT+GGG | + | chr1.3:16015783-16015802 | MS.gene93196:CDS | 35.0% | |
| TAACCAAGAAAACACGGTTT+AGG | + | chr1.3:16014676-16014695 | MS.gene93196:intron | 35.0% | |
| TAACCAAGAAAACACGGTTT+AGG | - | chr1.3:16014695-16014676 | None:intergenic | 35.0% | |
| TACATGAGTTAACTCACACT+GGG | - | chr1.3:16012347-16012366 | None:intergenic | 35.0% | |
| TATACAAACGATGACACAAC+AGG | - | chr1.3:16014857-16014838 | None:intergenic | 35.0% | |
| TATATATAGCCGAGTTTGCA+TGG | - | chr1.3:16014454-16014473 | None:intergenic | 35.0% | |
| TGTACTACTAGCGAAAAGAT+GGG | - | chr1.3:16013399-16013418 | None:intergenic | 35.0% | |
| TGTGATTCCGAGCTTAATTA+AGG | + | chr1.3:16016020-16016039 | MS.gene93196:intron | 35.0% | |
| TTACATGAGTTAACTCACAC+TGG | - | chr1.3:16012348-16012367 | None:intergenic | 35.0% | |
| TTCAAAATTTACTTGCCAGG+AGG | + | chr1.3:16016073-16016092 | MS.gene93196:intron | 35.0% | |
| TTGAATGTACTGAACCTGAA+GGG | - | chr1.3:16015906-16015925 | None:intergenic | 35.0% | |
| ! | TCATCTGGAAGATTTTCTGA+TGG | + | chr1.3:16011917-16011936 | MS.gene93196:CDS | 35.0% |
| !! | AATGGACTAAACATTCCACT+AGG | - | chr1.3:16015881-16015900 | None:intergenic | 35.0% |
| !! | AGGGATTGCTGTATTTTAGA+GGG | + | chr1.3:16014897-16014916 | MS.gene93196:intron | 35.0% |
| !! | GATGTAGATGGGTTTGTTAT+TGG | - | chr1.3:16015644-16015663 | None:intergenic | 35.0% |
| !! | TAGGGATTGCTGTATTTTAG+AGG | + | chr1.3:16014896-16014915 | MS.gene93196:intron | 35.0% |
| !! | TGAAGCACCGAAGTTAAAAA+TGG | - | chr1.3:16011822-16011841 | None:intergenic | 35.0% |
| !! | TGTTGAACACTTTTGGAAAG+TGG | + | chr1.3:16012026-16012045 | MS.gene93196:intron | 35.0% |
| !!! | ATGTGTTTTGATATTCAGGG+TGG | - | chr1.3:16015533-16015552 | None:intergenic | 35.0% |
| !!! | ATTTCAGCACATTTTTGGGT+TGG | + | chr1.3:16013004-16013023 | MS.gene93196:intron | 35.0% |
| !!! | GATCTTACTGCTGGATTTTT+TGG | + | chr1.3:16016169-16016188 | MS.gene93196:CDS | 35.0% |
| !!! | GTATTTTTTTTTGTGGTGGC+CGG | - | chr1.3:16014380-16014399 | None:intergenic | 35.0% |
| !!! | GTGTCATCATTTTTTCACGT+TGG | + | chr1.3:16012736-16012755 | MS.gene93196:intron | 35.0% |
| !!! | TATTTTTTTTTGTGGTGGCC+GGG | - | chr1.3:16014379-16014398 | None:intergenic | 35.0% |
| !!! | TCCCTAATGAACCTTGTTTT+AGG | - | chr1.3:16015944-16015963 | None:intergenic | 35.0% |
| !!! | TTTGGCTCACCGTATTTTTT+TGG | - | chr1.3:16016689-16016708 | None:intergenic | 35.0% |
| !!! | TTTTGGAAAAGAGAGTGCTT+TGG | - | chr1.3:16016665-16016684 | None:intergenic | 35.0% |
| AAACGATGACACAACAGGAT+AGG | - | chr1.3:16014194-16014213 | None:intergenic | 40.0% | |
| AAACTCTGATACTGGTGGTT+TGG | + | chr1.3:16011841-16011860 | MS.gene93196:CDS | 40.0% | |
| AAGAAAATAGGGAGTGAAGG+TGG | - | chr1.3:16012666-16012685 | None:intergenic | 40.0% | |
| AATGTTGCAAATACACCTCC+TGG | - | chr1.3:16016091-16016110 | None:intergenic | 40.0% | |
| ACAAAACATGATTGTGCGTG+GGG | + | chr1.3:16013444-16013463 | MS.gene93196:intron | 40.0% | |
| ACAAGGTTCATTAGGGATCA+AGG | + | chr1.3:16015947-16015966 | MS.gene93196:CDS | 40.0% | |
| ACACTATATAGGAGCTCACA+TGG | + | chr1.3:16015664-16015683 | MS.gene93196:intron | 40.0% | |
| ACATATGTGATTGCTGCTAG+TGG | - | chr1.3:16016629-16016648 | None:intergenic | 40.0% | |
| AGAAAATAGGGAGTGAAGGT+GGG | - | chr1.3:16012665-16012684 | None:intergenic | 40.0% | |
| CAAGACACAAAGATATCAGC+AGG | + | chr1.3:16013879-16013898 | MS.gene93196:intron | 40.0% | |
| CACCAGTGAGGAGAAATATT+AGG | - | chr1.3:16014160-16014179 | None:intergenic | 40.0% | |
| CAGCATGCATCTACTATAAG+AGG | - | chr1.3:16012116-16012135 | None:intergenic | 40.0% | |
| CATAAAATATGCAAGGTCCG+CGG | + | chr1.3:16014346-16014365 | MS.gene93196:intron | 40.0% | |
| CCCTAATTTCCATGCAAACT+CGG | + | chr1.3:16014442-16014461 | MS.gene93196:intron | 40.0% | |
| CCCTAATTTCCATGCAAACT+CGG | - | chr1.3:16014461-16014442 | None:intergenic | 40.0% | |
| CCGAGTTTGCATGGAAATTA+GGG | + | chr1.3:16014740-16014759 | MS.gene93196:intron | 40.0% | |
| CCGAGTTTGCATGGAAATTA+GGG | - | chr1.3:16014759-16014740 | None:intergenic | 40.0% | |
| CTGCTGATATCTTTGTGTCT+TGG | - | chr1.3:16013881-16013900 | None:intergenic | 40.0% | |
| GACAAAACATGATTGTGCGT+GGG | + | chr1.3:16013443-16013462 | MS.gene93196:intron | 40.0% | |
| GACCCAAGAGAATCAAGATA+TGG | - | chr1.3:16015788-16015807 | None:intergenic | 40.0% | |
| GCTGAGTTTGCATGGAAATT+AGG | + | chr1.3:16014713-16014732 | MS.gene93196:intron | 40.0% | |
| GGTCAAAATGATCTTACTGC+TGG | + | chr1.3:16016160-16016179 | MS.gene93196:CDS | 40.0% | |
| TACTGAACCTGAAGGGAAAA+TGG | - | chr1.3:16015899-16015918 | None:intergenic | 40.0% | |
| TCCCTAATATTTCTCCTCAC+TGG | + | chr1.3:16014155-16014174 | MS.gene93196:intron | 40.0% | |
| ! | AACCCTAAACCGTGTTTTCT+TGG | + | chr1.3:16014477-16014496 | MS.gene93196:intron | 40.0% |
| ! | AACCCTAAACCGTGTTTTCT+TGG | - | chr1.3:16014496-16014477 | None:intergenic | 40.0% |
| ! | AGGAGCGAGCAATTTTTGTT+GGG | + | chr1.3:16012483-16012502 | MS.gene93196:intron | 40.0% |
| ! | ATTTAGGGGCAAGGTCATTT+TGG | + | chr1.3:16016444-16016463 | MS.gene93196:intron | 40.0% |
| ! | GTTTAGTCCATTTTCCCTTC+AGG | + | chr1.3:16015889-16015908 | MS.gene93196:CDS | 40.0% |
| ! | TAGGAGCGAGCAATTTTTGT+TGG | + | chr1.3:16012482-16012501 | MS.gene93196:intron | 40.0% |
| !! | TATAACATTAGTGCTGGCTG+TGG | + | chr1.3:16016927-16016946 | MS.gene93196:CDS | 40.0% |
| !!! | ATTTTTTTTTGTGGTGGCCG+GGG | - | chr1.3:16014378-16014397 | None:intergenic | 40.0% |
| AGGGTTTGAACTTCCACTAG+TGG | + | chr1.3:16016875-16016894 | MS.gene93196:intron | 45.0% | |
| CGACAAAACATGATTGTGCG+TGG | + | chr1.3:16013442-16013461 | MS.gene93196:intron | 45.0% | |
| CTTGGGTCAAACTTCACACA+TGG | + | chr1.3:16015800-16015819 | MS.gene93196:CDS | 45.0% | |
| GAAAATAGGGAGTGAAGGTG+GGG | - | chr1.3:16012664-16012683 | None:intergenic | 45.0% | |
| GAATGAAAAGCCCATCAGTG+AGG | + | chr1.3:16014865-16014884 | MS.gene93196:intron | 45.0% | |
| GAATGAAAAGCTCACCAGTG+AGG | - | chr1.3:16014172-16014191 | None:intergenic | 45.0% | |
| GCACCGAAGTTAAAAATGGC+AGG | - | chr1.3:16011818-16011837 | None:intergenic | 45.0% | |
| GCCGAGTTTGCATGGAAATT+AGG | + | chr1.3:16014739-16014758 | MS.gene93196:intron | 45.0% | |
| GCCGAGTTTGCATGGAAATT+AGG | - | chr1.3:16014758-16014739 | None:intergenic | 45.0% | |
| GCTTCAAACTCTGATACTGG+TGG | + | chr1.3:16011836-16011855 | MS.gene93196:CDS | 45.0% | |
| GGTGCTTCAAACTCTGATAC+TGG | + | chr1.3:16011833-16011852 | MS.gene93196:CDS | 45.0% | |
| GTGCAAACTTTGCAACAGCA+GGG | + | chr1.3:16015822-16015841 | MS.gene93196:CDS | 45.0% | |
| ! | TGAGCTTAGCTCAGTTGGTA+TGG | + | chr1.3:16014317-16014336 | MS.gene93196:intron | 45.0% |
| !! | ATATATATATATATATAACA+AGG | - | chr1.3:16016383-16016402 | None:intergenic | 5.0% |
| !! | CAAAAATATAATTAATAATT+AGG | + | chr1.3:16013935-16013954 | MS.gene93196:intron | 5.0% |
| !! | TATATATATATATATAACAA+GGG | - | chr1.3:16016382-16016401 | None:intergenic | 5.0% |
| !!! | ATATAAATCATAATTTTTTT+AGG | + | chr1.3:16015364-16015383 | MS.gene93196:intron | 5.0% |
| !!! | ATTTTATAATAACAAATAAT+AGG | + | chr1.3:16013761-16013780 | MS.gene93196:intron | 5.0% |
| !!! | ATTTTTAATTAAAAATAATC+AGG | - | chr1.3:16013739-16013758 | None:intergenic | 5.0% |
| !!! | TTATACTTTTTAAATAATAA+AGG | - | chr1.3:16013158-16013177 | None:intergenic | 5.0% |
| !!! | TTTTATAATAACAAATAATA+GGG | + | chr1.3:16013762-16013781 | MS.gene93196:intron | 5.0% |
| AAAGAGCAGAAAGACGGGCA+CGG | + | chr1.3:16013369-16013388 | MS.gene93196:intron | 50.0% | |
| ATCCCTGCGAAGATGAGCTA+GGG | - | chr1.3:16016603-16016622 | None:intergenic | 50.0% | |
| CAGCGTGAGTTAACTCATGC+AGG | + | chr1.3:16012399-16012418 | MS.gene93196:intron | 50.0% | |
| GCATGAGTTAACTCACGCTG+AGG | - | chr1.3:16012399-16012418 | None:intergenic | 50.0% | |
| GGTGCAAACTTTGCAACAGC+AGG | + | chr1.3:16015821-16015840 | MS.gene93196:CDS | 50.0% | |
| TCGCATGAGTTAACTCACGC+AGG | + | chr1.3:16012245-16012264 | MS.gene93196:intron | 50.0% | |
| TGCGTGAGTTAACTCGCGTT+CGG | - | chr1.3:16012440-16012459 | None:intergenic | 50.0% | |
| TTAGGGTAGCCGAGTTTGCA+TGG | + | chr1.3:16014731-16014750 | MS.gene93196:intron | 50.0% | |
| TTGCCACAACAAGCCACTAG+TGG | - | chr1.3:16016891-16016910 | None:intergenic | 50.0% | |
| !! | CTAGTGGCTTGTTGTGGCAA+TGG | + | chr1.3:16016891-16016910 | MS.gene93196:intron | 50.0% |
| !! | CTTCCACTAGTGGCTTGTTG+TGG | + | chr1.3:16016885-16016904 | MS.gene93196:intron | 50.0% |
| AAGCCCTAGCTCATCTTCGC+AGG | + | chr1.3:16016597-16016616 | MS.gene93196:intron | 55.0% | |
| AATCCGGGCAACGTTAACGC+CGG | + | chr1.3:16014625-16014644 | MS.gene93196:intron | 55.0% | |
| AGCCCTAGCTCATCTTCGCA+GGG | + | chr1.3:16016598-16016617 | MS.gene93196:intron | 55.0% | |
| CAGCGTGAGTTAACACACGC+AGG | + | chr1.3:16012315-16012334 | MS.gene93196:intron | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | - | chr1.3:16014315-16014334 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | + | chr1.3:16014312-16014331 | MS.gene93196:intron | 55.0% | |
| GAGCGTGACTTAAGTCACGC+TGG | - | chr1.3:16012279-16012298 | None:intergenic | 55.0% | |
| GATCCCTGCGAAGATGAGCT+AGG | - | chr1.3:16016604-16016623 | None:intergenic | 55.0% | |
| GATGCATGCTGCAACAACCG+TGG | + | chr1.3:16012125-16012144 | MS.gene93196:intron | 55.0% | |
| GTTAGAGATTCGGCGTTGCC+CGG | + | chr1.3:16013957-16013976 | MS.gene93196:intron | 55.0% | |
| ! | CGAGCACTGCCGTTACCATA+TGG | + | chr1.3:16011875-16011894 | MS.gene93196:CDS | 55.0% |
| !! | GTGGCTTGTTGTGGCAATGG+AGG | + | chr1.3:16016894-16016913 | MS.gene93196:intron | 55.0% |
| !! | TGGTAACGGCAGTGCTCGAA+AGG | - | chr1.3:16011873-16011892 | None:intergenic | 55.0% |
| AAGGTCCGCGGTTCAAACCC+CGG | + | chr1.3:16014358-16014377 | MS.gene93196:intron | 60.0% | |
| ATCCGGGCAACGTTAACGCC+GGG | + | chr1.3:16014626-16014645 | MS.gene93196:intron | 60.0% | |
| GACCCGGCGTTAACGTTGCC+CGG | - | chr1.3:16014631-16014650 | None:intergenic | 65.0% | |
| GGTGGCCGGGGTTTGAACCG+CGG | - | chr1.3:16014366-16014385 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 16011713 | 16016960 | 16011713 | ID=MS.gene93196 |
| chr1.3 | mRNA | 16011713 | 16016960 | 16011713 | ID=MS.gene93196.t1;Parent=MS.gene93196 |
| chr1.3 | exon | 16011713 | 16011962 | 16011713 | ID=MS.gene93196.t1.exon1;Parent=MS.gene93196.t1 |
| chr1.3 | CDS | 16011713 | 16011962 | 16011713 | ID=cds.MS.gene93196.t1;Parent=MS.gene93196.t1 |
| chr1.3 | exon | 16015756 | 16015968 | 16015756 | ID=MS.gene93196.t1.exon2;Parent=MS.gene93196.t1 |
| chr1.3 | CDS | 16015756 | 16015968 | 16015756 | ID=cds.MS.gene93196.t1;Parent=MS.gene93196.t1 |
| chr1.3 | exon | 16016092 | 16016261 | 16016092 | ID=MS.gene93196.t1.exon3;Parent=MS.gene93196.t1 |
| chr1.3 | CDS | 16016092 | 16016261 | 16016092 | ID=cds.MS.gene93196.t1;Parent=MS.gene93196.t1 |
| chr1.3 | exon | 16016895 | 16016960 | 16016895 | ID=MS.gene93196.t1.exon4;Parent=MS.gene93196.t1 |
| chr1.3 | CDS | 16016895 | 16016960 | 16016895 | ID=cds.MS.gene93196.t1;Parent=MS.gene93196.t1 |
| Gene Sequence |
| Protein sequence |
