AlfalfaGEDB | MS.gene98021

M. sativa cultivar XinJiangDaYe / MS.gene98021

KEGG: -
GO: -
PFAM: PF04535.15

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98021.t1	XP_013442744.1	95	201	10	0	1	201	1	201	3.70E-99	370.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98021.t1	C6TG62	69.2	195	59	1	1	195	1	194	4.7e-71	268.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98021.t1	A0A072TGS8	95.0	201	10	0	1	201	1	201	2.6e-99	370.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049232	MS.gene98021	-0.804447	2.15E-49	-1.69E-46
MS.gene049320	MS.gene98021	-0.815833	7.55E-52	-1.69E-46
MS.gene049611	MS.gene98021	0.829727	4.38E-55	-1.69E-46
MS.gene049634	MS.gene98021	0.817997	2.47E-52	-1.69E-46
MS.gene050082	MS.gene98021	0.908163	2.31E-81	-1.69E-46
MS.gene050165	MS.gene98021	-0.813147	2.96E-51	-1.69E-46
MS.gene050170	MS.gene98021	-0.807907	4.02E-50	-1.69E-46
MS.gene050323	MS.gene98021	-0.829302	5.55E-55	-1.69E-46
MS.gene050333	MS.gene98021	-0.814715	1.34E-51	-1.69E-46
MS.gene050338	MS.gene98021	0.814907	1.21E-51	-1.69E-46
MS.gene050381	MS.gene98021	0.836104	1.14E-56	-1.69E-46
MS.gene050444	MS.gene98021	-0.808144	3.58E-50	-1.69E-46
MS.gene050496	MS.gene98021	-0.823114	1.65E-53	-1.69E-46
MS.gene050504	MS.gene98021	-0.808404	3.15E-50	-1.69E-46
MS.gene050612	MS.gene98021	-0.832733	7.99E-56	-1.69E-46
MS.gene050675	MS.gene98021	-0.817248	3.64E-52	-1.69E-46
MS.gene05079	MS.gene98021	0.816056	6.73E-52	-1.69E-46
MS.gene050868	MS.gene98021	-0.813012	3.17E-51	-1.69E-46
MS.gene050871	MS.gene98021	-0.812025	5.22E-51	-1.69E-46
MS.gene051044	MS.gene98021	0.801087	1.06E-48	-1.69E-46
MS.gene05104	MS.gene98021	0.825238	5.23E-54	-1.69E-46
MS.gene051127	MS.gene98021	0.826849	2.16E-54	-1.69E-46
MS.gene051138	MS.gene98021	0.868713	5.32E-66	-1.69E-46
MS.gene051268	MS.gene98021	-0.810236	1.27E-50	-1.69E-46
MS.gene051364	MS.gene98021	0.839466	1.56E-57	-1.69E-46
MS.gene051366	MS.gene98021	0.841253	5.31E-58	-1.69E-46
MS.gene051367	MS.gene98021	0.829417	5.21E-55	-1.69E-46
MS.gene051422	MS.gene98021	0.835248	1.87E-56	-1.69E-46
MS.gene051651	MS.gene98021	0.84232	2.78E-58	-1.69E-46
MS.gene051863	MS.gene98021	0.81239	4.34E-51	-1.69E-46
MS.gene051874	MS.gene98021	-0.802144	6.45E-49	-1.69E-46
MS.gene052211	MS.gene98021	0.805019	1.63E-49	-1.69E-46
MS.gene052486	MS.gene98021	-0.801936	7.12E-49	-1.69E-46
MS.gene052606	MS.gene98021	0.815233	1.03E-51	-1.69E-46
MS.gene053420	MS.gene98021	0.866464	2.80E-65	-1.69E-46
MS.gene053568	MS.gene98021	0.826426	2.73E-54	-1.69E-46
MS.gene053887	MS.gene98021	0.80041	1.46E-48	-1.69E-46
MS.gene053920	MS.gene98021	0.839029	2.02E-57	-1.69E-46
MS.gene054181	MS.gene98021	0.801065	1.07E-48	-1.69E-46
MS.gene054706	MS.gene98021	0.822858	1.89E-53	-1.69E-46
MS.gene054954	MS.gene98021	-0.814269	1.68E-51	-1.69E-46
MS.gene055154	MS.gene98021	0.826782	2.25E-54	-1.69E-46
MS.gene055158	MS.gene98021	0.805552	1.26E-49	-1.69E-46
MS.gene055202	MS.gene98021	0.817647	2.96E-52	-1.69E-46
MS.gene055362	MS.gene98021	-0.801596	8.36E-49	-1.69E-46
MS.gene055502	MS.gene98021	-0.813784	2.15E-51	-1.69E-46
MS.gene055748	MS.gene98021	-0.803786	2.95E-49	-1.69E-46
MS.gene055751	MS.gene98021	-0.811325	7.41E-51	-1.69E-46
MS.gene05589	MS.gene98021	-0.827014	1.98E-54	-1.69E-46
MS.gene055942	MS.gene98021	0.834603	2.72E-56	-1.69E-46
MS.gene055959	MS.gene98021	0.821072	4.90E-53	-1.69E-46
MS.gene056224	MS.gene98021	0.80678	6.97E-50	-1.69E-46
MS.gene056504	MS.gene98021	-0.837319	5.58E-57	-1.69E-46
MS.gene056590	MS.gene98021	0.827066	1.92E-54	-1.69E-46
MS.gene056591	MS.gene98021	0.825938	3.57E-54	-1.69E-46
MS.gene056657	MS.gene98021	-0.808398	3.16E-50	-1.69E-46
MS.gene056694	MS.gene98021	0.808552	2.93E-50	-1.69E-46
MS.gene056697	MS.gene98021	0.822555	2.22E-53	-1.69E-46
MS.gene056856	MS.gene98021	0.882991	6.54E-71	-1.69E-46
MS.gene056857	MS.gene98021	0.83361	4.83E-56	-1.69E-46
MS.gene057549	MS.gene98021	0.843433	1.41E-58	-1.69E-46
MS.gene057717	MS.gene98021	0.828476	8.80E-55	-1.69E-46
MS.gene057768	MS.gene98021	0.820374	7.10E-53	-1.69E-46
MS.gene058067	MS.gene98021	0.850727	1.41E-60	-1.69E-46
MS.gene058068	MS.gene98021	0.880837	3.95E-70	-1.69E-46
MS.gene058093	MS.gene98021	0.818659	1.75E-52	-1.69E-46
MS.gene058099	MS.gene98021	0.854655	1.06E-61	-1.69E-46
MS.gene058109	MS.gene98021	0.815882	7.36E-52	-1.69E-46
MS.gene058111	MS.gene98021	0.822076	2.87E-53	-1.69E-46
MS.gene058171	MS.gene98021	0.841276	5.24E-58	-1.69E-46
MS.gene058173	MS.gene98021	0.826733	2.31E-54	-1.69E-46
MS.gene058175	MS.gene98021	0.841427	4.78E-58	-1.69E-46
MS.gene058268	MS.gene98021	0.872259	3.65E-67	-1.69E-46
MS.gene058269	MS.gene98021	0.868054	8.68E-66	-1.69E-46
MS.gene058334	MS.gene98021	0.81504	1.13E-51	-1.69E-46
MS.gene058419	MS.gene98021	-0.811846	5.71E-51	-1.69E-46
MS.gene058603	MS.gene98021	0.813503	2.48E-51	-1.69E-46
MS.gene059022	MS.gene98021	-0.813385	2.63E-51	-1.69E-46
MS.gene059045	MS.gene98021	0.822132	2.79E-53	-1.69E-46
MS.gene059069	MS.gene98021	0.804835	1.79E-49	-1.69E-46
MS.gene059070	MS.gene98021	0.817097	3.94E-52	-1.69E-46
MS.gene059677	MS.gene98021	-0.811939	5.45E-51	-1.69E-46
MS.gene059685	MS.gene98021	0.817616	3.01E-52	-1.69E-46
MS.gene059865	MS.gene98021	-0.83439	3.08E-56	-1.69E-46
MS.gene059953	MS.gene98021	0.801012	1.10E-48	-1.69E-46
MS.gene059955	MS.gene98021	0.804645	1.96E-49	-1.69E-46
MS.gene060405	MS.gene98021	0.826729	2.31E-54	-1.69E-46
MS.gene060595	MS.gene98021	0.808955	2.40E-50	-1.69E-46
MS.gene060762	MS.gene98021	-0.818452	1.95E-52	-1.69E-46
MS.gene060778	MS.gene98021	-0.81397	1.95E-51	-1.69E-46
MS.gene060823	MS.gene98021	0.834481	2.92E-56	-1.69E-46
MS.gene060982	MS.gene98021	-0.817735	2.83E-52	-1.69E-46
MS.gene061044	MS.gene98021	0.829627	4.63E-55	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98021.t1	MTR_0097s0070	95.025	201	10	0	1	201	1	201	8.23e-133	371
MS.gene98021.t1	MTR_8g089300	72.680	194	52	1	1	194	1	193	8.18e-94	272
MS.gene98021.t1	MTR_4g118810	36.986	146	86	3	29	171	35	177	1.20e-22	90.9
MS.gene98021.t1	MTR_7g108130	31.429	175	113	3	16	189	17	185	3.23e-21	87.0
MS.gene98021.t1	MTR_0004s0210	32.927	164	94	2	29	192	10	157	1.13e-20	84.7
MS.gene98021.t1	MTR_2g020060	28.659	164	106	3	31	189	27	184	2.23e-15	71.2
MS.gene98021.t1	MTR_7g011090	27.957	186	121	3	6	188	10	185	6.98e-14	67.4
MS.gene98021.t1	MTR_4g081880	30.189	159	96	4	31	185	33	180	3.30e-12	62.8
MS.gene98021.t1	MTR_5g041900	30.323	155	101	1	31	185	32	179	2.44e-11	60.5
MS.gene98021.t1	MTR_1g058540	33.562	146	84	4	31	173	42	177	5.58e-11	59.7
MS.gene98021.t1	MTR_2g086740	27.607	163	95	3	31	185	66	213	7.65e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98021.t1	AT5G44550	58.140	172	72	0	23	194	14	185	2.25e-65	200
MS.gene98021.t1	AT4G20390	55.294	170	75	1	22	190	12	181	3.23e-53	169
MS.gene98021.t1	AT4G15620	29.570	186	124	4	5	189	10	189	8.45e-19	80.5
MS.gene98021.t1	AT4G15630	28.022	182	125	3	9	189	13	189	4.92e-18	78.6
MS.gene98021.t1	AT1G03700	28.049	164	102	3	29	192	11	158	2.15e-17	76.3
MS.gene98021.t1	AT4G15610	30.070	143	95	3	31	172	33	171	8.75e-16	72.8
MS.gene98021.t1	AT1G14160	28.387	155	104	1	31	185	55	202	1.46e-15	72.4
MS.gene98021.t1	AT5G15290	30.769	143	90	3	31	172	32	166	2.16e-15	71.2
MS.gene98021.t1	AT3G06390	30.827	133	84	3	32	161	42	169	3.97e-14	68.2
MS.gene98021.t1	AT4G03540	30.841	107	67	2	68	174	41	140	9.83e-13	63.9

Find 41 sgRNAs with CRISPR-Local

Find 71 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGCTGGAGTTTGATTAAATT+TGG	0.215698	2.3:-43265559	None:intergenic
GCCCTTATTGCTTCTTTCAT+TGG	0.228754	2.3:+43266422	MS.gene98021:CDS
GCAGAAATAGTAGCAGTTAT+TGG	0.231666	2.3:-43265537	None:intergenic
CAGAAATAGTAGCAGTTATT+GGG	0.254239	2.3:-43265536	None:intergenic
AAGTCCTTTGTAATCATATT+GGG	0.274380	2.3:-43266123	None:intergenic
ATGATTGCATTGGATATATT+AGG	0.293339	2.3:+43266098	MS.gene98021:CDS
TACAAAATGGCTTCAAGAAA+TGG	0.318606	2.3:+43265342	None:intergenic
GAAGTCCTTTGTAATCATAT+TGG	0.328703	2.3:-43266124	None:intergenic
AGCCAATGAAAGAAGCAATA+AGG	0.340360	2.3:-43266424	None:intergenic
GGTGTCAATAACAAAACTTT+TGG	0.404127	2.3:-43265502	None:intergenic
TTTGAAAGCTATTGCAATAG+AGG	0.418883	2.3:+43266392	MS.gene98021:CDS
ATGTCAGCATTGGGAAGAAA+TGG	0.423404	2.3:+43266332	MS.gene98021:CDS
GCCAATGAAAGAAGCAATAA+GGG	0.431019	2.3:-43266423	None:intergenic
GGAGCATGGTTAATGCGATT+AGG	0.431376	2.3:-43266497	None:intergenic
TTGAAAACTTACACAAAAGC+TGG	0.466135	2.3:-43265576	None:intergenic
GCGATTAGGTTTGAGAAGCT+TGG	0.466239	2.3:-43266483	None:intergenic
ATGCAATCATCACCAAGTTA+TGG	0.467360	2.3:-43266085	None:intergenic
AGCAACATTCATGTCAGCAT+TGG	0.488005	2.3:+43266322	MS.gene98021:CDS
ACTATGGCTCTGGCATCAGC+TGG	0.494373	2.3:+43266290	MS.gene98021:CDS
GCAACATTCATGTCAGCATT+GGG	0.495269	2.3:+43266323	MS.gene98021:CDS
AAATGCTAGTCTCCATAACT+TGG	0.496794	2.3:+43266073	MS.gene98021:CDS
GGTGAAGTTAACTATGGCTC+TGG	0.500555	2.3:+43266280	MS.gene98021:intron
TGCAGCTGCAACACTTGTAA+TGG	0.510923	2.3:+43265464	MS.gene98021:CDS
TGGTAATTCACATGCAAGAT+GGG	0.512674	2.3:+43266352	MS.gene98021:CDS
ATGGTAATTCACATGCAAGA+TGG	0.522902	2.3:+43266351	MS.gene98021:CDS
ATGGAGACTAGCATTTCCAT+TGG	0.523367	2.3:-43266066	None:intergenic
AGGTTCTTTGTGATAGCCAA+TGG	0.526185	2.3:+43266050	MS.gene98021:intron
GCTCTGGCATCAGCTGGAGA+TGG	0.540036	2.3:+43266296	MS.gene98021:CDS
TGTTAATCATATCAAGGACT+AGG	0.549879	2.3:-43266518	None:intergenic
TAACTTGGTGATGATTGCAT+TGG	0.550469	2.3:+43266088	MS.gene98021:CDS
AGGTTTGAGAAGCTTGGCAA+TGG	0.555323	2.3:-43266477	None:intergenic
TACAAGTGTTGCAGCTGCAG+TGG	0.571483	2.3:-43265460	None:intergenic
CTAAAATTGCAATAAATGCA+AGG	0.578209	2.3:-43266148	None:intergenic
AGCTATTGCAATAGAGGTGG+TGG	0.598102	2.3:+43266398	MS.gene98021:CDS
CATATCAAGGACTAGGAGCA+TGG	0.606251	2.3:-43266511	None:intergenic
GAAAGCTATTGCAATAGAGG+TGG	0.619990	2.3:+43266395	MS.gene98021:CDS
AGTTATTGGGGTGTTACCAA+CGG	0.622547	2.3:-43265523	None:intergenic
AGTCCTTTGTAATCATATTG+GGG	0.628572	2.3:-43266122	None:intergenic
AGAAATAGTAGCAGTTATTG+GGG	0.633112	2.3:-43265535	None:intergenic
GGACCCCAATATGATTACAA+AGG	0.645480	2.3:+43266119	MS.gene98021:CDS
GGTGAAGAGAAAGTTGAACG+TGG	0.756724	2.3:+43265363	MS.gene98021:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AGTTTTTTAATTTTTTTCTT+AGG	+	chr2.3:43266211-43266230	MS.gene98021:intron	10.0%
!!	AATCAATACTACTTATATTT+CGG	-	chr2.3:43265772-43265791	None:intergenic	15.0%
!!	AAAGAAAAACAAAGAATGAT+TGG	+	chr2.3:43265403-43265422	MS.gene98021:CDS	20.0%
!!!	AAACCAAAAAAGTTTTATGT+AGG	+	chr2.3:43265795-43265814	MS.gene98021:intron	20.0%
!!!	ATTTATTGCAATTTTAGACA+TGG	+	chr2.3:43266154-43266173	MS.gene98021:CDS	20.0%
!	AACGAACATAAATTGAAAAG+AGG	-	chr2.3:43265677-43265696	None:intergenic	25.0%
!	AAGTCCTTTGTAATCATATT+GGG	-	chr2.3:43266126-43266145	None:intergenic	25.0%
!	ATGATTGCATTGGATATATT+AGG	+	chr2.3:43266098-43266117	MS.gene98021:CDS	25.0%
!	CTAAAATTGCAATAAATGCA+AGG	-	chr2.3:43266151-43266170	None:intergenic	25.0%
!	TTACATTAACACATCATTGT+GGG	+	chr2.3:43266020-43266039	MS.gene98021:intron	25.0%
!	TTTACATTAACACATCATTG+TGG	+	chr2.3:43266019-43266038	MS.gene98021:intron	25.0%
!!	ATTGGATTCTTTTATCTCTT+CGG	+	chr2.3:43265421-43265440	MS.gene98021:CDS	25.0%
!!	CTCTATTTTCTCAATATTAG+TGG	-	chr2.3:43265876-43265895	None:intergenic	25.0%
!!!	ATATTAGTGGTTAATTTGTC+AGG	-	chr2.3:43265863-43265882	None:intergenic	25.0%
!!!	TATTAGTGGTTAATTTGTCA+GGG	-	chr2.3:43265862-43265881	None:intergenic	25.0%
	AGAAATAGTAGCAGTTATTG+GGG	-	chr2.3:43265538-43265557	None:intergenic	30.0%
	AGCTGGAGTTTGATTAAATT+TGG	-	chr2.3:43265562-43265581	None:intergenic	30.0%
	AGTCCTTTGTAATCATATTG+GGG	-	chr2.3:43266125-43266144	None:intergenic	30.0%
	CAGAAATAGTAGCAGTTATT+GGG	-	chr2.3:43265539-43265558	None:intergenic	30.0%
	GAAGTCCTTTGTAATCATAT+TGG	-	chr2.3:43266127-43266146	None:intergenic	30.0%
	TACATTAACACATCATTGTG+GGG	+	chr2.3:43266021-43266040	MS.gene98021:intron	30.0%
	TTGAAAACTTACACAAAAGC+TGG	-	chr2.3:43265579-43265598	None:intergenic	30.0%
	TTTGAAAGCTATTGCAATAG+AGG	+	chr2.3:43266392-43266411	MS.gene98021:CDS	30.0%
!	GGTGTCAATAACAAAACTTT+TGG	-	chr2.3:43265505-43265524	None:intergenic	30.0%
!	TTGGATTCTTTTATCTCTTC+GGG	+	chr2.3:43265422-43265441	MS.gene98021:CDS	30.0%
!!	ATTAGTGGTTAATTTGTCAG+GGG	-	chr2.3:43265861-43265880	None:intergenic	30.0%
!!	CCAAAAAAGTTTTATGTAGG+AGG	+	chr2.3:43265798-43265817	MS.gene98021:intron	30.0%
!!!	CCTCCTACATAAAACTTTTT+TGG	-	chr2.3:43265801-43265820	None:intergenic	30.0%
!!!	TTTTTGGGTGAAGTTAACTA+TGG	+	chr2.3:43266274-43266293	MS.gene98021:intron	30.0%
	AGCCAATGAAAGAAGCAATA+AGG	-	chr2.3:43266427-43266446	None:intergenic	35.0%
	ATGCAATCATCACCAAGTTA+TGG	-	chr2.3:43266088-43266107	None:intergenic	35.0%
	ATGGTAATTCACATGCAAGA+TGG	+	chr2.3:43266351-43266370	MS.gene98021:CDS	35.0%
	GCAGAAATAGTAGCAGTTAT+TGG	-	chr2.3:43265540-43265559	None:intergenic	35.0%
	GCCAATGAAAGAAGCAATAA+GGG	-	chr2.3:43266426-43266445	None:intergenic	35.0%
	TAGTAGAAGAGGTCGAATAT+CGG	-	chr2.3:43265825-43265844	None:intergenic	35.0%
	TGGTAATTCACATGCAAGAT+GGG	+	chr2.3:43266352-43266371	MS.gene98021:CDS	35.0%
!	AAATGCTAGTCTCCATAACT+TGG	+	chr2.3:43266073-43266092	MS.gene98021:CDS	35.0%
!!	TAACTTGGTGATGATTGCAT+TGG	+	chr2.3:43266088-43266107	MS.gene98021:CDS	35.0%
!!	TTAGTGGTTAATTTGTCAGG+GGG	-	chr2.3:43265860-43265879	None:intergenic	35.0%
!!!	AGTTTTGTTATTGACACCGT+TGG	+	chr2.3:43265507-43265526	MS.gene98021:CDS	35.0%
	AGCAACATTCATGTCAGCAT+TGG	+	chr2.3:43266322-43266341	MS.gene98021:CDS	40.0%
	AGGTTCTTTGTGATAGCCAA+TGG	+	chr2.3:43266050-43266069	MS.gene98021:intron	40.0%
	ATGGAGACTAGCATTTCCAT+TGG	-	chr2.3:43266069-43266088	None:intergenic	40.0%
	GAAAGCTATTGCAATAGAGG+TGG	+	chr2.3:43266395-43266414	MS.gene98021:CDS	40.0%
	GAGGGAAATGTTAGTAGAAG+AGG	-	chr2.3:43265836-43265855	None:intergenic	40.0%
	GCAACATTCATGTCAGCATT+GGG	+	chr2.3:43266323-43266342	MS.gene98021:CDS	40.0%
	GCCCTTATTGCTTCTTTCAT+TGG	+	chr2.3:43266422-43266441	MS.gene98021:CDS	40.0%
	GGACCCCAATATGATTACAA+AGG	+	chr2.3:43266119-43266138	MS.gene98021:CDS	40.0%
!	AGTTATTGGGGTGTTACCAA+CGG	-	chr2.3:43265526-43265545	None:intergenic	40.0%
!	ATGTCAGCATTGGGAAGAAA+TGG	+	chr2.3:43266332-43266351	MS.gene98021:CDS	40.0%
!	GATTCTTTTATCTCTTCGGG+TGG	+	chr2.3:43265425-43265444	MS.gene98021:CDS	40.0%
	ACATCATTGTGGGGTGATAC+AGG	+	chr2.3:43266030-43266049	MS.gene98021:intron	45.0%
	AGCTATTGCAATAGAGGTGG+TGG	+	chr2.3:43266398-43266417	MS.gene98021:CDS	45.0%
	AGGTTTGAGAAGCTTGGCAA+TGG	-	chr2.3:43266480-43266499	None:intergenic	45.0%
	GCGATTAGGTTTGAGAAGCT+TGG	-	chr2.3:43266486-43266505	None:intergenic	45.0%
	GGAGCATGGTTAATGCGATT+AGG	-	chr2.3:43266500-43266519	None:intergenic	45.0%
	GGTGAAGAGAAAGTTGAACG+TGG	+	chr2.3:43265363-43265382	MS.gene98021:CDS	45.0%
	GGTGAAGTTAACTATGGCTC+TGG	+	chr2.3:43266280-43266299	MS.gene98021:intron	45.0%
	TGCAGCTGCAACACTTGTAA+TGG	+	chr2.3:43265464-43265483	MS.gene98021:CDS	45.0%
!!	GTTAATTTGTCAGGGGGAGA+GGG	-	chr2.3:43265854-43265873	None:intergenic	45.0%
!!!	ATTGATAAATAATATTTTTT+TGG	+	chr2.3:43266258-43266277	MS.gene98021:intron	5.0%
!!!	TTGATAAATAATATTTTTTT+GGG	+	chr2.3:43266259-43266278	MS.gene98021:intron	5.0%
!	TACAAGTGTTGCAGCTGCAG+TGG	-	chr2.3:43265463-43265482	None:intergenic	50.0%
!!	GGTTAATTTGTCAGGGGGAG+AGG	-	chr2.3:43265855-43265874	None:intergenic	50.0%
!!	ACTATGGCTCTGGCATCAGC+TGG	+	chr2.3:43266290-43266309	MS.gene98021:CDS	55.0%
	AGAGTCCCCGCACGAGTAGT+AGG	+	chr2.3:43265742-43265761	MS.gene98021:intron	60.0%
	CGGACCTCCTACTACTCGTG+CGG	-	chr2.3:43265752-43265771	None:intergenic	60.0%
	GACCTCCTACTACTCGTGCG+GGG	-	chr2.3:43265750-43265769	None:intergenic	60.0%
	GCTCTGGCATCAGCTGGAGA+TGG	+	chr2.3:43266296-43266315	MS.gene98021:CDS	60.0%
	GGACCTCCTACTACTCGTGC+GGG	-	chr2.3:43265751-43265770	None:intergenic	60.0%
	GTCCCCGCACGAGTAGTAGG+AGG	+	chr2.3:43265745-43265764	MS.gene98021:intron	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.3	gene	43265348	43266529	43265348	ID=MS.gene98021
chr2.3	mRNA	43265348	43266529	43265348	ID=MS.gene98021.t1;Parent=MS.gene98021
chr2.3	exon	43265348	43265586	43265348	ID=MS.gene98021.t1.exon1;Parent=MS.gene98021.t1
chr2.3	CDS	43265348	43265586	43265348	ID=cds.MS.gene98021.t1;Parent=MS.gene98021.t1
chr2.3	exon	43266052	43266175	43266052	ID=MS.gene98021.t1.exon2;Parent=MS.gene98021.t1
chr2.3	CDS	43266052	43266175	43266052	ID=cds.MS.gene98021.t1;Parent=MS.gene98021.t1
chr2.3	exon	43266287	43266529	43266287	ID=MS.gene98021.t1.exon3;Parent=MS.gene98021.t1
chr2.3	CDS	43266287	43266529	43266287	ID=cds.MS.gene98021.t1;Parent=MS.gene98021.t1

Gene Sequence

>MS.gene98021

ATGGCTTCAAGAAATGGTGAAGAGAAAGTTGAACGTGGCTTCAATGATGTTCATGAAAGAAAAACAAAGAATGATTGGATTCTTTTATCTCTTCGGGTGGCTGCATTTTTTGCCACTGCAGCTGCAACACTTGTAATGGCACTCAACAAACAGACCAAAAGTTTTGTTATTGACACCGTTGGTAACACCCCAATAACTGCTACTATTTCTGCCAAATTTAATCAAACTCCAGCTTTTGTGTAAGTTTTCAATAGTTATTATATATATATATATATATATATATATACACACACACACACACACACAAATATCTATGATTCTACTTTCCTCTTTTCAATTTATGTTCGTTTGCAATGTGACTACTAGAAAAAAAAATATAGTAGTAACAATAAATAGAGTCCCCGCACGAGTAGTAGGAGGTCCGAAATATAAGTAGTATTGATTCAGAAACCAAAAAAGTTTTATGTAGGAGGTCCGATATTCGACCTCTTCTACTAACATTTCCCTCTCCCCCTGACAAATTAACCACTAATATTGAGAAAATAGAGAAAGAAAATTGTTACGATATGTCTCTAATCTCATTGCTTAATTCAAAGACGATGAATTTAGAGACATGTTTAATTTTTTTGTGATGATATAGCTATTTTTATTTTATTATAGATTTTTATACATTTACATTAACACATCATTGTGGGGTGATACAGGTTCTTTGTGATAGCCAATGGAAATGCTAGTCTCCATAACTTGGTGATGATTGCATTGGATATATTAGGACCCCAATATGATTACAAAGGACTTCGCCTTGCATTTATTGCAATTTTAGACATGGTAATTTTTTTAATTAATTTTACATCAATTCTACAAGTTTTTTAATTTTTTTCTTAGGATATCATTTATGTAAGAAAAAATGATTGATAAATAATATTTTTTTGGGTGAAGTTAACTATGGCTCTGGCATCAGCTGGAGATGGTGCAGCAACATTCATGTCAGCATTGGGAAGAAATGGTAATTCACATGCAAGATGGGATAAGATTTGTGACAAATTTGAAAGCTATTGCAATAGAGGTGGTGGTGCCCTTATTGCTTCTTTCATTGGCTTCATTCTTCTCTTGATTATCACTGTGATGTCCATTGCCAAGCTTCTCAAACCTAATCGCATTAACCATGCTCCTAGTCCTTGA

Protein sequence

>MS.gene98021.t1

MASRNGEEKVERGFNDVHERKTKNDWILLSLRVAAFFATAAATLVMALNKQTKSFVIDTVGNTPITATISAKFNQTPAFVFFVIANGNASLHNLVMIALDILGPQYDYKGLRLAFIAILDMLTMALASAGDGAATFMSALGRNGNSHARWDKICDKFESYCNRGGGALIASFIGFILLLIITVMSIAKLLKPNRINHAPSP