AlfalfaGEDB | MS.gene75261

M. sativa cultivar XinJiangDaYe / MS.gene75261

KEGG: -
GO: -
PFAM: PF04535.15

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene75261.t1	XP_013442744.1	96	201	8	0	1	201	1	201	3.30E-100	374.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene75261.t1	C6TG62	69.7	195	58	1	1	195	1	194	1.2e-71	270.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene75261.t1	A0A072TGS8	96.0	201	8	0	1	201	1	201	2.4e-100	374.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049320	MS.gene75261	-0.804048	2.60E-49	-1.69E-46
MS.gene049611	MS.gene75261	0.843209	1.61E-58	-1.69E-46
MS.gene049634	MS.gene75261	0.810408	1.17E-50	-1.69E-46
MS.gene050082	MS.gene75261	0.912323	2.22E-83	-1.69E-46
MS.gene050165	MS.gene75261	-0.802879	4.55E-49	-1.69E-46
MS.gene050170	MS.gene75261	-0.810456	1.14E-50	-1.69E-46
MS.gene050323	MS.gene75261	-0.825775	3.90E-54	-1.69E-46
MS.gene050333	MS.gene75261	-0.810523	1.10E-50	-1.69E-46
MS.gene050338	MS.gene75261	0.803785	2.95E-49	-1.69E-46
MS.gene050381	MS.gene75261	0.825662	4.15E-54	-1.69E-46
MS.gene050496	MS.gene75261	-0.820888	5.41E-53	-1.69E-46
MS.gene050504	MS.gene75261	-0.808357	3.22E-50	-1.69E-46
MS.gene050612	MS.gene75261	-0.824638	7.24E-54	-1.69E-46
MS.gene050675	MS.gene75261	-0.815437	9.25E-52	-1.69E-46
MS.gene05079	MS.gene75261	0.803495	3.39E-49	-1.69E-46
MS.gene050868	MS.gene75261	-0.813867	2.06E-51	-1.69E-46
MS.gene050871	MS.gene75261	-0.812005	5.27E-51	-1.69E-46
MS.gene051044	MS.gene75261	0.811251	7.69E-51	-1.69E-46
MS.gene05104	MS.gene75261	0.829444	5.13E-55	-1.69E-46
MS.gene051127	MS.gene75261	0.8255	4.53E-54	-1.69E-46
MS.gene051138	MS.gene75261	0.865194	7.04E-65	-1.69E-46
MS.gene051268	MS.gene75261	-0.808186	3.51E-50	-1.69E-46
MS.gene051364	MS.gene75261	0.857026	2.16E-62	-1.69E-46
MS.gene051366	MS.gene75261	0.845368	4.24E-59	-1.69E-46
MS.gene051367	MS.gene75261	0.841079	5.90E-58	-1.69E-46
MS.gene051422	MS.gene75261	0.844966	5.45E-59	-1.69E-46
MS.gene051651	MS.gene75261	0.837355	5.46E-57	-1.69E-46
MS.gene051863	MS.gene75261	0.8073	5.41E-50	-1.69E-46
MS.gene051874	MS.gene75261	-0.805154	1.53E-49	-1.69E-46
MS.gene052211	MS.gene75261	0.807463	4.99E-50	-1.69E-46
MS.gene052486	MS.gene75261	-0.802613	5.16E-49	-1.69E-46
MS.gene052606	MS.gene75261	0.81628	6.00E-52	-1.69E-46
MS.gene053420	MS.gene75261	0.872078	4.19E-67	-1.69E-46
MS.gene053568	MS.gene75261	0.816115	6.53E-52	-1.69E-46
MS.gene053887	MS.gene75261	0.809003	2.35E-50	-1.69E-46
MS.gene053920	MS.gene75261	0.821191	4.60E-53	-1.69E-46
MS.gene054706	MS.gene75261	0.820537	6.51E-53	-1.69E-46
MS.gene054954	MS.gene75261	-0.807114	5.92E-50	-1.69E-46
MS.gene055154	MS.gene75261	0.832278	1.04E-55	-1.69E-46
MS.gene055158	MS.gene75261	0.810554	1.09E-50	-1.69E-46
MS.gene055202	MS.gene75261	0.830996	2.14E-55	-1.69E-46
MS.gene055502	MS.gene75261	-0.805448	1.33E-49	-1.69E-46
MS.gene055748	MS.gene75261	-0.800791	1.22E-48	-1.69E-46
MS.gene055751	MS.gene75261	-0.810178	1.31E-50	-1.69E-46
MS.gene05589	MS.gene75261	-0.827427	1.57E-54	-1.69E-46
MS.gene055942	MS.gene75261	0.825331	4.97E-54	-1.69E-46
MS.gene055959	MS.gene75261	0.803045	4.20E-49	-1.69E-46
MS.gene056224	MS.gene75261	0.808156	3.56E-50	-1.69E-46
MS.gene056504	MS.gene75261	-0.835023	2.14E-56	-1.69E-46
MS.gene056692	MS.gene75261	-0.8001	1.69E-48	-1.69E-46
MS.gene056697	MS.gene75261	0.801782	7.65E-49	-1.69E-46
MS.gene056748	MS.gene75261	0.801574	8.44E-49	-1.69E-46
MS.gene056856	MS.gene75261	0.873825	1.09E-67	-1.69E-46
MS.gene056857	MS.gene75261	0.8206	6.30E-53	-1.69E-46
MS.gene057549	MS.gene75261	0.838658	2.52E-57	-1.69E-46
MS.gene057717	MS.gene75261	0.810633	1.05E-50	-1.69E-46
MS.gene057768	MS.gene75261	0.828775	7.45E-55	-1.69E-46
MS.gene058067	MS.gene75261	0.849576	2.96E-60	-1.69E-46
MS.gene058068	MS.gene75261	0.881296	2.70E-70	-1.69E-46
MS.gene058093	MS.gene75261	0.801848	7.42E-49	-1.69E-46
MS.gene058099	MS.gene75261	0.849168	3.84E-60	-1.69E-46
MS.gene058109	MS.gene75261	0.811187	7.94E-51	-1.69E-46
MS.gene058111	MS.gene75261	0.826066	3.33E-54	-1.69E-46
MS.gene058117	MS.gene75261	0.805096	1.57E-49	-1.69E-46
MS.gene058171	MS.gene75261	0.831198	1.91E-55	-1.69E-46
MS.gene058173	MS.gene75261	0.821559	3.79E-53	-1.69E-46
MS.gene058175	MS.gene75261	0.835271	1.85E-56	-1.69E-46
MS.gene058268	MS.gene75261	0.87008	1.91E-66	-1.69E-46
MS.gene058269	MS.gene75261	0.868935	4.51E-66	-1.69E-46
MS.gene058334	MS.gene75261	0.808923	2.44E-50	-1.69E-46
MS.gene058419	MS.gene75261	-0.801405	9.14E-49	-1.69E-46
MS.gene058603	MS.gene75261	0.807042	6.13E-50	-1.69E-46
MS.gene059022	MS.gene75261	-0.812717	3.68E-51	-1.69E-46
MS.gene059045	MS.gene75261	0.825368	4.87E-54	-1.69E-46
MS.gene059069	MS.gene75261	0.806422	8.29E-50	-1.69E-46
MS.gene059070	MS.gene75261	0.81782	2.70E-52	-1.69E-46
MS.gene059315	MS.gene75261	0.805522	1.28E-49	-1.69E-46
MS.gene059677	MS.gene75261	-0.808603	2.86E-50	-1.69E-46
MS.gene059685	MS.gene75261	0.823076	1.68E-53	-1.69E-46
MS.gene059865	MS.gene75261	-0.835165	1.97E-56	-1.69E-46
MS.gene059953	MS.gene75261	0.800121	1.67E-48	-1.69E-46
MS.gene059955	MS.gene75261	0.802496	5.46E-49	-1.69E-46
MS.gene060405	MS.gene75261	0.815276	1.00E-51	-1.69E-46
MS.gene060595	MS.gene75261	0.817203	3.73E-52	-1.69E-46
MS.gene060762	MS.gene75261	-0.813902	2.02E-51	-1.69E-46
MS.gene060778	MS.gene75261	-0.811345	7.34E-51	-1.69E-46
MS.gene06077	MS.gene75261	-0.807762	4.31E-50	-1.69E-46
MS.gene060823	MS.gene75261	0.829318	5.50E-55	-1.69E-46
MS.gene060982	MS.gene75261	-0.812972	3.24E-51	-1.69E-46
MS.gene061044	MS.gene75261	0.822133	2.79E-53	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene75261.t1	MTR_0097s0070	96.020	201	8	0	1	201	1	201	1.85e-142	395
MS.gene75261.t1	MTR_8g089300	73.196	194	51	1	1	194	1	193	2.77e-94	273
MS.gene75261.t1	MTR_4g118810	36.986	146	86	3	29	171	35	177	4.65e-22	89.4
MS.gene75261.t1	MTR_7g108130	31.609	174	112	3	17	189	18	185	7.52e-21	85.9
MS.gene75261.t1	MTR_0004s0210	32.927	164	94	2	29	192	10	157	1.03e-20	84.7
MS.gene75261.t1	MTR_2g020060	28.659	164	106	3	31	189	27	184	5.62e-15	70.5
MS.gene75261.t1	MTR_7g011090	27.957	186	121	3	6	188	10	185	1.07e-13	67.0
MS.gene75261.t1	MTR_4g081880	30.189	159	96	4	31	185	33	180	4.97e-12	62.4
MS.gene75261.t1	MTR_5g041900	30.323	155	101	1	31	185	32	179	1.73e-11	60.8
MS.gene75261.t1	MTR_1g058540	33.562	146	84	4	31	173	42	177	7.86e-11	59.3
MS.gene75261.t1	MTR_2g086740	29.268	123	71	2	71	185	99	213	8.21e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene75261.t1	AT5G44550	58.721	172	71	0	23	194	14	185	1.85e-66	202
MS.gene75261.t1	AT4G20390	55.882	170	74	1	22	190	12	181	5.07e-54	171
MS.gene75261.t1	AT4G15620	29.570	186	124	4	5	189	10	189	2.22e-18	79.3
MS.gene75261.t1	AT1G03700	28.659	164	101	3	29	192	11	158	8.07e-18	77.4
MS.gene75261.t1	AT4G15630	28.022	182	125	3	9	189	13	189	1.22e-17	77.4
MS.gene75261.t1	AT4G15610	30.556	144	93	3	31	172	33	171	5.54e-16	73.2
MS.gene75261.t1	AT1G14160	29.032	155	103	1	31	185	55	202	6.80e-16	73.2
MS.gene75261.t1	AT5G15290	30.769	143	90	3	31	172	32	166	3.75e-15	70.9
MS.gene75261.t1	AT3G06390	30.827	133	84	3	32	161	42	169	8.76e-14	67.4
MS.gene75261.t1	AT4G03540	29.008	131	77	3	44	174	26	140	4.39e-13	64.7

Find 41 sgRNAs with CRISPR-Local

Find 70 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGCTGGAGTTTGATTAAATT+TGG	0.215698	2.1:-43738139	None:intergenic
GCCCTTATTGCTTCTTTCAT+TGG	0.228754	2.1:+43739007	MS.gene75261:CDS
GCAGAAAGAGTAGCAGTTAT+TGG	0.256041	2.1:-43738117	None:intergenic
AAGTCCTTTGTAATCATATT+GGG	0.274380	2.1:-43738709	None:intergenic
ATGATTGCATTGGATATATT+AGG	0.293339	2.1:+43738684	MS.gene75261:CDS
CAGAAAGAGTAGCAGTTATT+GGG	0.306576	2.1:-43738116	None:intergenic
TACAAAATGGCTTCAAGAAA+TGG	0.318606	2.1:+43737922	None:intergenic
GAAGTCCTTTGTAATCATAT+TGG	0.328703	2.1:-43738710	None:intergenic
AGCCAATGAAAGAAGCAATA+AGG	0.340360	2.1:-43739009	None:intergenic
GGTGCCAATAACAAAACTTT+TGG	0.346894	2.1:-43738082	None:intergenic
TTTGAAAGCTATTGCAATAG+AGG	0.418883	2.1:+43738977	MS.gene75261:CDS
ATGTCAGCATTGGGAAGAAA+TGG	0.423404	2.1:+43738917	MS.gene75261:CDS
GCCAATGAAAGAAGCAATAA+GGG	0.431019	2.1:-43739008	None:intergenic
GGAGCATGGTTAATGCGATT+AGG	0.431376	2.1:-43739082	None:intergenic
TTGAAAACTTACACAAAAGC+TGG	0.437745	2.1:-43738156	None:intergenic
GCGATTAGGTTTGAGAAGCT+TGG	0.466239	2.1:-43739068	None:intergenic
ATGCAATCATCACCAAGTTA+TGG	0.467360	2.1:-43738671	None:intergenic
AGCAACATTCATGTCAGCAT+TGG	0.488005	2.1:+43738907	MS.gene75261:CDS
ACTATGGCTCTGGCATCAGC+TGG	0.494373	2.1:+43738875	MS.gene75261:CDS
GCAACATTCATGTCAGCATT+GGG	0.495269	2.1:+43738908	MS.gene75261:CDS
AAATGCTAGTCTCCATAACT+TGG	0.496794	2.1:+43738659	MS.gene75261:CDS
GGTGAAGTTAACTATGGCTC+TGG	0.500555	2.1:+43738865	MS.gene75261:intron
TGCAGCTGCAACACTTGTAA+TGG	0.510923	2.1:+43738044	MS.gene75261:CDS
TGGTAATTCACATGCAAGAT+GGG	0.512674	2.1:+43738937	MS.gene75261:CDS
ATGGTAATTCACATGCAAGA+TGG	0.522902	2.1:+43738936	MS.gene75261:CDS
ATGGAGACTAGCATTTCCAT+TGG	0.523367	2.1:-43738652	None:intergenic
AGGTTCTTTGTGATAGCCAA+TGG	0.526185	2.1:+43738636	MS.gene75261:intron
GCTCTGGCATCAGCTGGAGA+TGG	0.540036	2.1:+43738881	MS.gene75261:CDS
TGTTAATCATATCAAGGACT+AGG	0.549879	2.1:-43739103	None:intergenic
TAACTTGGTGATGATTGCAT+TGG	0.550469	2.1:+43738674	MS.gene75261:CDS
AGGTTTGAGAAGCTTGGCAA+TGG	0.555323	2.1:-43739062	None:intergenic
TACAAGTGTTGCAGCTGCAG+TGG	0.571483	2.1:-43738040	None:intergenic
CTAAAATTGCAATAAATGCA+AGG	0.578209	2.1:-43738734	None:intergenic
AGCTATTGCAATAGAGGTGG+TGG	0.598102	2.1:+43738983	MS.gene75261:CDS
CATATCAAGGACTAGGAGCA+TGG	0.606251	2.1:-43739096	None:intergenic
GAAAGCTATTGCAATAGAGG+TGG	0.619990	2.1:+43738980	MS.gene75261:CDS
AGTTATTGGGGTGTTACCAA+CGG	0.622547	2.1:-43738103	None:intergenic
AGTCCTTTGTAATCATATTG+GGG	0.628572	2.1:-43738708	None:intergenic
AGAAAGAGTAGCAGTTATTG+GGG	0.633112	2.1:-43738115	None:intergenic
GGACCCCAATATGATTACAA+AGG	0.645480	2.1:+43738705	MS.gene75261:CDS
GGTGAAGAGAAAGTTGAACG+TGG	0.756724	2.1:+43737943	MS.gene75261:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTATACATTTATATTAACAT+GGG	+	chr2.1:43738606-43738625	MS.gene75261:intron	10.0%
!!	TTTATACATTTATATTAACA+TGG	+	chr2.1:43738605-43738624	MS.gene75261:intron	10.0%
!!!	AAGTTTTTTAATTTTTTCTT+AGG	+	chr2.1:43738796-43738815	MS.gene75261:intron	10.0%
!!	TATACATTTATATTAACATG+GGG	+	chr2.1:43738607-43738626	MS.gene75261:intron	15.0%
!!	AAAGAAAAACAAAGAATGAT+TGG	+	chr2.1:43737983-43738002	MS.gene75261:CDS	20.0%
!!!	AAACCAAAAAAGTTTTATGT+AGG	+	chr2.1:43738375-43738394	MS.gene75261:intron	20.0%
!!!	ATTTATTGCAATTTTAGACA+TGG	+	chr2.1:43738740-43738759	MS.gene75261:CDS	20.0%
!	AAGTCCTTTGTAATCATATT+GGG	-	chr2.1:43738712-43738731	None:intergenic	25.0%
!	AATTTCATCGCTTAATTCAA+AGG	+	chr2.1:43738502-43738521	MS.gene75261:intron	25.0%
!	ATGATTGCATTGGATATATT+AGG	+	chr2.1:43738684-43738703	MS.gene75261:CDS	25.0%
!	CTAAAATTGCAATAAATGCA+AGG	-	chr2.1:43738737-43738756	None:intergenic	25.0%
!!	ATTGGATTCTTTTATCTCTT+CGG	+	chr2.1:43738001-43738020	MS.gene75261:CDS	25.0%
	ACGATTGAGAAAATAGAGAA+AGG	+	chr2.1:43738458-43738477	MS.gene75261:intron	30.0%
	AGCTGGAGTTTGATTAAATT+TGG	-	chr2.1:43738142-43738161	None:intergenic	30.0%
	AGTCCTTTGTAATCATATTG+GGG	-	chr2.1:43738711-43738730	None:intergenic	30.0%
	GAAGTCCTTTGTAATCATAT+TGG	-	chr2.1:43738713-43738732	None:intergenic	30.0%
	TTGAAAACTTACACAAAAGC+TGG	-	chr2.1:43738159-43738178	None:intergenic	30.0%
	TTTGAAAGCTATTGCAATAG+AGG	+	chr2.1:43738977-43738996	MS.gene75261:CDS	30.0%
!	TTGGATTCTTTTATCTCTTC+GGG	+	chr2.1:43738002-43738021	MS.gene75261:CDS	30.0%
!!	CCAAAAAAGTTTTATGTAGG+AGG	+	chr2.1:43738378-43738397	MS.gene75261:intron	30.0%
!!!	CAGACCAAAAGTTTTGTTAT+TGG	+	chr2.1:43738078-43738097	MS.gene75261:CDS	30.0%
!!!	CCTCCTACATAAAACTTTTT+TGG	-	chr2.1:43738381-43738400	None:intergenic	30.0%
!!!	TTTTTGGGTGAAGTTAACTA+TGG	+	chr2.1:43738859-43738878	MS.gene75261:intron	30.0%
	AGAAAGAGTAGCAGTTATTG+GGG	-	chr2.1:43738118-43738137	None:intergenic	35.0%
	AGCCAATGAAAGAAGCAATA+AGG	-	chr2.1:43739012-43739031	None:intergenic	35.0%
	ATACCATTGTACTACTCGTT+CGG	-	chr2.1:43738347-43738366	None:intergenic	35.0%
	ATATTAACATGGGGTGATAC+AGG	+	chr2.1:43738616-43738635	MS.gene75261:intron	35.0%
	ATGCAATCATCACCAAGTTA+TGG	-	chr2.1:43738674-43738693	None:intergenic	35.0%
	ATGGTAATTCACATGCAAGA+TGG	+	chr2.1:43738936-43738955	MS.gene75261:CDS	35.0%
	CAGAAAGAGTAGCAGTTATT+GGG	-	chr2.1:43738119-43738138	None:intergenic	35.0%
	GCCAATGAAAGAAGCAATAA+GGG	-	chr2.1:43739011-43739030	None:intergenic	35.0%
	TAGTAGAAGAGGTCGAATAT+CGG	-	chr2.1:43738405-43738424	None:intergenic	35.0%
	TGGTAATTCACATGCAAGAT+GGG	+	chr2.1:43738937-43738956	MS.gene75261:CDS	35.0%
!	AAATGCTAGTCTCCATAACT+TGG	+	chr2.1:43738659-43738678	MS.gene75261:CDS	35.0%
!	CTCTATTTTCTCAATCGTAG+TGG	-	chr2.1:43738456-43738475	None:intergenic	35.0%
!	GGTGCCAATAACAAAACTTT+TGG	-	chr2.1:43738085-43738104	None:intergenic	35.0%
!!	ATCGTAGTGGTTAATTTGTC+AGG	-	chr2.1:43738443-43738462	None:intergenic	35.0%
!!	TAACTTGGTGATGATTGCAT+TGG	+	chr2.1:43738674-43738693	MS.gene75261:CDS	35.0%
!!	TCGTAGTGGTTAATTTGTCA+GGG	-	chr2.1:43738442-43738461	None:intergenic	35.0%
	AGCAACATTCATGTCAGCAT+TGG	+	chr2.1:43738907-43738926	MS.gene75261:CDS	40.0%
	AGGTTCTTTGTGATAGCCAA+TGG	+	chr2.1:43738636-43738655	MS.gene75261:intron	40.0%
	ATGGAGACTAGCATTTCCAT+TGG	-	chr2.1:43738655-43738674	None:intergenic	40.0%
	GAAAGCTATTGCAATAGAGG+TGG	+	chr2.1:43738980-43738999	MS.gene75261:CDS	40.0%
	GAGGGAAATGTTAGTAGAAG+AGG	-	chr2.1:43738416-43738435	None:intergenic	40.0%
	GCAACATTCATGTCAGCATT+GGG	+	chr2.1:43738908-43738927	MS.gene75261:CDS	40.0%
	GCAGAAAGAGTAGCAGTTAT+TGG	-	chr2.1:43738120-43738139	None:intergenic	40.0%
	GCCCTTATTGCTTCTTTCAT+TGG	+	chr2.1:43739007-43739026	MS.gene75261:CDS	40.0%
	GGACCCCAATATGATTACAA+AGG	+	chr2.1:43738705-43738724	MS.gene75261:CDS	40.0%
	TACCATTGTACTACTCGTTC+GGG	-	chr2.1:43738346-43738365	None:intergenic	40.0%
!	AGTTATTGGGGTGTTACCAA+CGG	-	chr2.1:43738106-43738125	None:intergenic	40.0%
!	ATGTCAGCATTGGGAAGAAA+TGG	+	chr2.1:43738917-43738936	MS.gene75261:CDS	40.0%
!	GATTCTTTTATCTCTTCGGG+TGG	+	chr2.1:43738005-43738024	MS.gene75261:CDS	40.0%
!!	GTTAATTTGTCAGGGAGAGA+GGG	-	chr2.1:43738434-43738453	None:intergenic	40.0%
!!!	AGTTTTGTTATTGGCACCGT+TGG	+	chr2.1:43738087-43738106	MS.gene75261:CDS	40.0%
	ACCATTGTACTACTCGTTCG+GGG	-	chr2.1:43738345-43738364	None:intergenic	45.0%
	AGCTATTGCAATAGAGGTGG+TGG	+	chr2.1:43738983-43739002	MS.gene75261:CDS	45.0%
	AGGTTTGAGAAGCTTGGCAA+TGG	-	chr2.1:43739065-43739084	None:intergenic	45.0%
	GCGATTAGGTTTGAGAAGCT+TGG	-	chr2.1:43739071-43739090	None:intergenic	45.0%
	GGAGCATGGTTAATGCGATT+AGG	-	chr2.1:43739085-43739104	None:intergenic	45.0%
	GGTGAAGAGAAAGTTGAACG+TGG	+	chr2.1:43737943-43737962	MS.gene75261:CDS	45.0%
	GGTGAAGTTAACTATGGCTC+TGG	+	chr2.1:43738865-43738884	MS.gene75261:intron	45.0%
	TGCAGCTGCAACACTTGTAA+TGG	+	chr2.1:43738044-43738063	MS.gene75261:CDS	45.0%
!!	GGTTAATTTGTCAGGGAGAG+AGG	-	chr2.1:43738435-43738454	None:intergenic	45.0%
!!	ATCTATAATAAAATTAAAAT+AGG	-	chr2.1:43738584-43738603	None:intergenic	5.0%
!!!	ATTGATAAATAATATTTTTT+TGG	+	chr2.1:43738843-43738862	MS.gene75261:intron	5.0%
!!!	TTGATAAATAATATTTTTTT+GGG	+	chr2.1:43738844-43738863	MS.gene75261:intron	5.0%
	TCCCCGAACGAGTAGTACAA+TGG	+	chr2.1:43738341-43738360	MS.gene75261:intron	50.0%
!	TACAAGTGTTGCAGCTGCAG+TGG	-	chr2.1:43738043-43738062	None:intergenic	50.0%
!!	ACTATGGCTCTGGCATCAGC+TGG	+	chr2.1:43738875-43738894	MS.gene75261:CDS	55.0%
	GCTCTGGCATCAGCTGGAGA+TGG	+	chr2.1:43738881-43738900	MS.gene75261:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.1	gene	43737928	43739114	43737928	ID=MS.gene75261
chr2.1	mRNA	43737928	43739114	43737928	ID=MS.gene75261.t1;Parent=MS.gene75261
chr2.1	exon	43737928	43738166	43737928	ID=MS.gene75261.t1.exon1;Parent=MS.gene75261.t1
chr2.1	CDS	43737928	43738166	43737928	ID=cds.MS.gene75261.t1;Parent=MS.gene75261.t1
chr2.1	exon	43738638	43738761	43738638	ID=MS.gene75261.t1.exon2;Parent=MS.gene75261.t1
chr2.1	CDS	43738638	43738761	43738638	ID=cds.MS.gene75261.t1;Parent=MS.gene75261.t1
chr2.1	exon	43738872	43739114	43738872	ID=MS.gene75261.t1.exon3;Parent=MS.gene75261.t1
chr2.1	CDS	43738872	43739114	43738872	ID=cds.MS.gene75261.t1;Parent=MS.gene75261.t1

Gene Sequence

>MS.gene75261

ATGGCTTCAAGAAATGGTGAAGAGAAAGTTGAACGTGGCTTCAATGATGTTCATGAAAGAAAAACAAAGAATGATTGGATTCTTTTATCTCTTCGGGTGGCTGCATTTTTTGCCACTGCAGCTGCAACACTTGTAATGGCACTCAACAAACAGACCAAAAGTTTTGTTATTGGCACCGTTGGTAACACCCCAATAACTGCTACTCTTTCTGCCAAATTTAATCAAACTCCAGCTTTTGTGTAAGTTTTCAATAATTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACACAAATATCTATGATTCTACTTTTCTCTTTTTTATTTATGTTCGTTTGCAATGACTACTAGAAAAAAAATATAAGTAGTAACAATAGAGTCCCCGAACGAGTAGTACAATGGTATCGATTCATAAACCAAAAAAGTTTTATGTAGGAGGTCCGATATTCGACCTCTTCTACTAACATTTCCCTCTCTCCCTGACAAATTAACCACTACGATTGAGAAAATAGAGAAAGGAAATTGTGATGATCTATCTCTAATTTCATCGCTTAATTCAAAGGCGATGAATTTAAAGATATGTTTATTATTTTTTTATTTTTATTTTTGTGATGATATTCCTATTTTAATTTTATTATAGATTTTTATACATTTATATTAACATGGGGTGATACAGGTTCTTTGTGATAGCCAATGGAAATGCTAGTCTCCATAACTTGGTGATGATTGCATTGGATATATTAGGACCCCAATATGATTACAAAGGACTTCGCCTTGCATTTATTGCAATTTTAGACATGGTAATTTTTTTAATTAATTTTACATCAATTCTACAAGTTTTTTAATTTTTTCTTAGGATATCATTTATGTAAGAAAAAATGATTGATAAATAATATTTTTTTGGGTGAAGTTAACTATGGCTCTGGCATCAGCTGGAGATGGTGCAGCAACATTCATGTCAGCATTGGGAAGAAATGGTAATTCACATGCAAGATGGGATAAGATTTGTGACAAATTTGAAAGCTATTGCAATAGAGGTGGTGGTGCCCTTATTGCTTCTTTCATTGGCTTCATTCTTCTCTTGATTATCACTGTGATGTCCATTGCCAAGCTTCTCAAACCTAATCGCATTAACCATGCTCCTAGTCCTTGA

Protein sequence

>MS.gene75261.t1

MASRNGEEKVERGFNDVHERKTKNDWILLSLRVAAFFATAAATLVMALNKQTKSFVIGTVGNTPITATLSAKFNQTPAFVFFVIANGNASLHNLVMIALDILGPQYDYKGLRLAFIAILDMLTMALASAGDGAATFMSALGRNGNSHARWDKICDKFESYCNRGGGALIASFIGFILLLIITVMSIAKLLKPNRINHAPSP