Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37612.t1 | XP_024639354.1 | 95.8 | 239 | 10 | 0 | 1 | 239 | 1 | 239 | 1.90E-126 | 461.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37612.t1 | Q9ZVE0 | 60.6 | 236 | 78 | 4 | 1 | 236 | 1 | 221 | 2.2e-75 | 283.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37612.t1 | A0A396HVX4 | 95.8 | 239 | 10 | 0 | 1 | 239 | 1 | 239 | 1.4e-126 | 461.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene37612 | 0.804805 | 1.81E-49 | -1.69E-46 |
| MS.gene049159 | MS.gene37612 | 0.805109 | 1.56E-49 | -1.69E-46 |
| MS.gene04918 | MS.gene37612 | 0.807461 | 5.00E-50 | -1.69E-46 |
| MS.gene04920 | MS.gene37612 | 0.801198 | 1.01E-48 | -1.69E-46 |
| MS.gene049254 | MS.gene37612 | 0.880047 | 7.57E-70 | -1.69E-46 |
| MS.gene049272 | MS.gene37612 | 0.813414 | 2.59E-51 | -1.69E-46 |
| MS.gene049343 | MS.gene37612 | 0.811663 | 6.25E-51 | -1.69E-46 |
| MS.gene049404 | MS.gene37612 | 0.816619 | 5.04E-52 | -1.69E-46 |
| MS.gene049435 | MS.gene37612 | 0.819015 | 1.45E-52 | -1.69E-46 |
| MS.gene049452 | MS.gene37612 | 0.823974 | 1.04E-53 | -1.69E-46 |
| MS.gene049499 | MS.gene37612 | 0.830358 | 3.07E-55 | -1.69E-46 |
| MS.gene049567 | MS.gene37612 | 0.806149 | 9.46E-50 | -1.69E-46 |
| MS.gene049666 | MS.gene37612 | 0.819613 | 1.06E-52 | -1.69E-46 |
| MS.gene049669 | MS.gene37612 | 0.849187 | 3.80E-60 | -1.69E-46 |
| MS.gene049825 | MS.gene37612 | 0.802011 | 6.87E-49 | -1.69E-46 |
| MS.gene049873 | MS.gene37612 | 0.817592 | 3.04E-52 | -1.69E-46 |
| MS.gene049977 | MS.gene37612 | 0.803267 | 3.78E-49 | -1.69E-46 |
| MS.gene049983 | MS.gene37612 | 0.818396 | 2.00E-52 | -1.69E-46 |
| MS.gene050026 | MS.gene37612 | 0.857215 | 1.90E-62 | -1.69E-46 |
| MS.gene050073 | MS.gene37612 | 0.820409 | 6.97E-53 | -1.69E-46 |
| MS.gene050156 | MS.gene37612 | 0.804441 | 2.16E-49 | -1.69E-46 |
| MS.gene050237 | MS.gene37612 | 0.806347 | 8.60E-50 | -1.69E-46 |
| MS.gene050273 | MS.gene37612 | 0.807759 | 4.32E-50 | -1.69E-46 |
| MS.gene050300 | MS.gene37612 | -0.81267 | 3.77E-51 | -1.69E-46 |
| MS.gene050355 | MS.gene37612 | 0.827529 | 1.49E-54 | -1.69E-46 |
| MS.gene050442 | MS.gene37612 | 0.809776 | 1.60E-50 | -1.69E-46 |
| MS.gene050559 | MS.gene37612 | 0.856054 | 4.17E-62 | -1.69E-46 |
| MS.gene050561 | MS.gene37612 | 0.854325 | 1.33E-61 | -1.69E-46 |
| MS.gene050562 | MS.gene37612 | 0.844914 | 5.63E-59 | -1.69E-46 |
| MS.gene050750 | MS.gene37612 | 0.822549 | 2.23E-53 | -1.69E-46 |
| MS.gene050759 | MS.gene37612 | 0.814682 | 1.36E-51 | -1.69E-46 |
| MS.gene050799 | MS.gene37612 | 0.804325 | 2.28E-49 | -1.69E-46 |
| MS.gene050953 | MS.gene37612 | 0.827641 | 1.40E-54 | -1.69E-46 |
| MS.gene050962 | MS.gene37612 | 0.803954 | 2.72E-49 | -1.69E-46 |
| MS.gene051181 | MS.gene37612 | 0.829138 | 6.09E-55 | -1.69E-46 |
| MS.gene051198 | MS.gene37612 | 0.820247 | 7.59E-53 | -1.69E-46 |
| MS.gene051247 | MS.gene37612 | 0.821144 | 4.72E-53 | -1.69E-46 |
| MS.gene051279 | MS.gene37612 | 0.848906 | 4.55E-60 | -1.69E-46 |
| MS.gene051332 | MS.gene37612 | 0.83168 | 1.46E-55 | -1.69E-46 |
| MS.gene051368 | MS.gene37612 | 0.811563 | 6.58E-51 | -1.69E-46 |
| MS.gene051492 | MS.gene37612 | 0.804871 | 1.75E-49 | -1.69E-46 |
| MS.gene051574 | MS.gene37612 | 0.819896 | 9.13E-53 | -1.69E-46 |
| MS.gene051594 | MS.gene37612 | 0.841611 | 4.28E-58 | -1.69E-46 |
| MS.gene051744 | MS.gene37612 | 0.835765 | 1.39E-56 | -1.69E-46 |
| MS.gene051800 | MS.gene37612 | 0.802571 | 5.27E-49 | -1.69E-46 |
| MS.gene051832 | MS.gene37612 | 0.819916 | 9.03E-53 | -1.69E-46 |
| MS.gene051957 | MS.gene37612 | 0.810231 | 1.28E-50 | -1.69E-46 |
| MS.gene052037 | MS.gene37612 | 0.834207 | 3.43E-56 | -1.69E-46 |
| MS.gene052056 | MS.gene37612 | -0.800623 | 1.32E-48 | -1.69E-46 |
| MS.gene052108 | MS.gene37612 | 0.82098 | 5.15E-53 | -1.69E-46 |
| MS.gene052208 | MS.gene37612 | 0.826364 | 2.83E-54 | -1.69E-46 |
| MS.gene052239 | MS.gene37612 | -0.830738 | 2.48E-55 | -1.69E-46 |
| MS.gene052333 | MS.gene37612 | 0.817692 | 2.89E-52 | -1.69E-46 |
| MS.gene052447 | MS.gene37612 | 0.833604 | 4.85E-56 | -1.69E-46 |
| MS.gene052463 | MS.gene37612 | 0.825588 | 4.32E-54 | -1.69E-46 |
| MS.gene052519 | MS.gene37612 | 0.860976 | 1.42E-63 | -1.69E-46 |
| MS.gene052534 | MS.gene37612 | 0.845449 | 4.03E-59 | -1.69E-46 |
| MS.gene052582 | MS.gene37612 | 0.864344 | 1.30E-64 | -1.69E-46 |
| MS.gene052584 | MS.gene37612 | 0.864056 | 1.60E-64 | -1.69E-46 |
| MS.gene052586 | MS.gene37612 | 0.849224 | 3.71E-60 | -1.69E-46 |
| MS.gene052677 | MS.gene37612 | 0.804065 | 2.58E-49 | -1.69E-46 |
| MS.gene052685 | MS.gene37612 | 0.854554 | 1.14E-61 | -1.69E-46 |
| MS.gene052686 | MS.gene37612 | 0.809887 | 1.52E-50 | -1.69E-46 |
| MS.gene052768 | MS.gene37612 | 0.807348 | 5.28E-50 | -1.69E-46 |
| MS.gene052773 | MS.gene37612 | 0.808157 | 3.55E-50 | -1.69E-46 |
| MS.gene052867 | MS.gene37612 | 0.825402 | 4.78E-54 | -1.69E-46 |
| MS.gene052954 | MS.gene37612 | 0.800595 | 1.34E-48 | -1.69E-46 |
| MS.gene053006 | MS.gene37612 | 0.848193 | 7.16E-60 | -1.69E-46 |
| MS.gene053082 | MS.gene37612 | 0.842636 | 2.29E-58 | -1.69E-46 |
| MS.gene05308 | MS.gene37612 | 0.818786 | 1.63E-52 | -1.69E-46 |
| MS.gene053145 | MS.gene37612 | 0.800264 | 1.56E-48 | -1.69E-46 |
| MS.gene053166 | MS.gene37612 | 0.81463 | 1.40E-51 | -1.69E-46 |
| MS.gene053201 | MS.gene37612 | 0.805786 | 1.13E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene37612 | 0.839376 | 1.64E-57 | -1.69E-46 |
| MS.gene053321 | MS.gene37612 | 0.810267 | 1.26E-50 | -1.69E-46 |
| MS.gene053396 | MS.gene37612 | 0.820005 | 8.62E-53 | -1.69E-46 |
| MS.gene05365 | MS.gene37612 | 0.822502 | 2.29E-53 | -1.69E-46 |
| MS.gene053963 | MS.gene37612 | 0.848545 | 5.73E-60 | -1.69E-46 |
| MS.gene053966 | MS.gene37612 | 0.807282 | 5.45E-50 | -1.69E-46 |
| MS.gene053995 | MS.gene37612 | 0.81333 | 2.70E-51 | -1.69E-46 |
| MS.gene053998 | MS.gene37612 | 0.80011 | 1.68E-48 | -1.69E-46 |
| MS.gene05414 | MS.gene37612 | 0.830505 | 2.83E-55 | -1.69E-46 |
| MS.gene05415 | MS.gene37612 | 0.852488 | 4.47E-61 | -1.69E-46 |
| MS.gene054222 | MS.gene37612 | 0.811117 | 8.22E-51 | -1.69E-46 |
| MS.gene054236 | MS.gene37612 | 0.818883 | 1.55E-52 | -1.69E-46 |
| MS.gene05423 | MS.gene37612 | 0.845209 | 4.68E-59 | -1.69E-46 |
| MS.gene054291 | MS.gene37612 | -0.841555 | 4.43E-58 | -1.69E-46 |
| MS.gene054405 | MS.gene37612 | 0.821285 | 4.38E-53 | -1.69E-46 |
| MS.gene054479 | MS.gene37612 | 0.831797 | 1.36E-55 | -1.69E-46 |
| MS.gene054576 | MS.gene37612 | 0.815889 | 7.34E-52 | -1.69E-46 |
| MS.gene05458 | MS.gene37612 | 0.808822 | 2.56E-50 | -1.69E-46 |
| MS.gene054651 | MS.gene37612 | 0.850591 | 1.54E-60 | -1.69E-46 |
| MS.gene054657 | MS.gene37612 | 0.803667 | 3.13E-49 | -1.69E-46 |
| MS.gene054775 | MS.gene37612 | 0.821031 | 5.01E-53 | -1.69E-46 |
| MS.gene054991 | MS.gene37612 | 0.803563 | 3.28E-49 | -1.69E-46 |
| MS.gene055166 | MS.gene37612 | 0.808732 | 2.68E-50 | -1.69E-46 |
| MS.gene055227 | MS.gene37612 | 0.821953 | 3.07E-53 | -1.69E-46 |
| MS.gene055228 | MS.gene37612 | 0.830832 | 2.35E-55 | -1.69E-46 |
| MS.gene055586 | MS.gene37612 | 0.827028 | 1.96E-54 | -1.69E-46 |
| MS.gene055589 | MS.gene37612 | 0.822326 | 2.51E-53 | -1.69E-46 |
| MS.gene055694 | MS.gene37612 | 0.814898 | 1.22E-51 | -1.69E-46 |
| MS.gene055701 | MS.gene37612 | 0.81201 | 5.26E-51 | -1.69E-46 |
| MS.gene055724 | MS.gene37612 | 0.815127 | 1.08E-51 | -1.69E-46 |
| MS.gene055778 | MS.gene37612 | 0.836788 | 7.62E-57 | -1.69E-46 |
| MS.gene055818 | MS.gene37612 | 0.865419 | 5.99E-65 | -1.69E-46 |
| MS.gene055841 | MS.gene37612 | 0.838888 | 2.20E-57 | -1.69E-46 |
| MS.gene055926 | MS.gene37612 | 0.822696 | 2.06E-53 | -1.69E-46 |
| MS.gene05604 | MS.gene37612 | 0.812869 | 3.41E-51 | -1.69E-46 |
| MS.gene056050 | MS.gene37612 | 0.846126 | 2.64E-59 | -1.69E-46 |
| MS.gene056162 | MS.gene37612 | 0.849089 | 4.04E-60 | -1.69E-46 |
| MS.gene056173 | MS.gene37612 | 0.804724 | 1.88E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene37612 | 0.880126 | 7.09E-70 | -1.69E-46 |
| MS.gene056252 | MS.gene37612 | 0.820546 | 6.48E-53 | -1.69E-46 |
| MS.gene056272 | MS.gene37612 | 0.823529 | 1.32E-53 | -1.69E-46 |
| MS.gene056308 | MS.gene37612 | 0.805124 | 1.55E-49 | -1.69E-46 |
| MS.gene056366 | MS.gene37612 | 0.841953 | 3.48E-58 | -1.69E-46 |
| MS.gene056373 | MS.gene37612 | 0.822755 | 2.00E-53 | -1.69E-46 |
| MS.gene056498 | MS.gene37612 | 0.824402 | 8.23E-54 | -1.69E-46 |
| MS.gene056506 | MS.gene37612 | 0.824907 | 6.26E-54 | -1.69E-46 |
| MS.gene056595 | MS.gene37612 | 0.831428 | 1.68E-55 | -1.69E-46 |
| MS.gene05659 | MS.gene37612 | 0.811962 | 5.39E-51 | -1.69E-46 |
| MS.gene056699 | MS.gene37612 | 0.802081 | 6.65E-49 | -1.69E-46 |
| MS.gene056776 | MS.gene37612 | 0.850219 | 1.96E-60 | -1.69E-46 |
| MS.gene056779 | MS.gene37612 | 0.825267 | 5.15E-54 | -1.69E-46 |
| MS.gene05686 | MS.gene37612 | 0.843074 | 1.75E-58 | -1.69E-46 |
| MS.gene056873 | MS.gene37612 | 0.810287 | 1.24E-50 | -1.69E-46 |
| MS.gene05690 | MS.gene37612 | 0.83928 | 1.74E-57 | -1.69E-46 |
| MS.gene056973 | MS.gene37612 | 0.816358 | 5.76E-52 | -1.69E-46 |
| MS.gene057021 | MS.gene37612 | 0.821515 | 3.88E-53 | -1.69E-46 |
| MS.gene057026 | MS.gene37612 | 0.827723 | 1.34E-54 | -1.69E-46 |
| MS.gene057027 | MS.gene37612 | 0.804794 | 1.82E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene37612 | 0.815449 | 9.19E-52 | -1.69E-46 |
| MS.gene057102 | MS.gene37612 | 0.829376 | 5.33E-55 | -1.69E-46 |
| MS.gene057208 | MS.gene37612 | 0.87164 | 5.86E-67 | -1.69E-46 |
| MS.gene057414 | MS.gene37612 | 0.826154 | 3.17E-54 | -1.69E-46 |
| MS.gene057444 | MS.gene37612 | 0.833287 | 5.82E-56 | -1.69E-46 |
| MS.gene057598 | MS.gene37612 | 0.825412 | 4.76E-54 | -1.69E-46 |
| MS.gene057693 | MS.gene37612 | 0.816917 | 4.32E-52 | -1.69E-46 |
| MS.gene057855 | MS.gene37612 | 0.800617 | 1.33E-48 | -1.69E-46 |
| MS.gene057869 | MS.gene37612 | 0.800935 | 1.14E-48 | -1.69E-46 |
| MS.gene057921 | MS.gene37612 | 0.808715 | 2.70E-50 | -1.69E-46 |
| MS.gene058008 | MS.gene37612 | 0.828496 | 8.70E-55 | -1.69E-46 |
| MS.gene058009 | MS.gene37612 | 0.830879 | 2.29E-55 | -1.69E-46 |
| MS.gene058010 | MS.gene37612 | 0.80966 | 1.70E-50 | -1.69E-46 |
| MS.gene058037 | MS.gene37612 | 0.861376 | 1.07E-63 | -1.69E-46 |
| MS.gene058159 | MS.gene37612 | 0.822837 | 1.91E-53 | -1.69E-46 |
| MS.gene058279 | MS.gene37612 | 0.832951 | 7.05E-56 | -1.69E-46 |
| MS.gene058294 | MS.gene37612 | 0.850712 | 1.42E-60 | -1.69E-46 |
| MS.gene05847 | MS.gene37612 | 0.804962 | 1.68E-49 | -1.69E-46 |
| MS.gene058502 | MS.gene37612 | 0.80286 | 4.59E-49 | -1.69E-46 |
| MS.gene058548 | MS.gene37612 | 0.806485 | 8.04E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene37612 | 0.843697 | 1.19E-58 | -1.69E-46 |
| MS.gene058769 | MS.gene37612 | 0.808536 | 2.95E-50 | -1.69E-46 |
| MS.gene058783 | MS.gene37612 | 0.818319 | 2.09E-52 | -1.69E-46 |
| MS.gene058979 | MS.gene37612 | 0.83189 | 1.29E-55 | -1.69E-46 |
| MS.gene059272 | MS.gene37612 | 0.845116 | 4.96E-59 | -1.69E-46 |
| MS.gene059439 | MS.gene37612 | 0.816711 | 4.80E-52 | -1.69E-46 |
| MS.gene059459 | MS.gene37612 | 0.805623 | 1.22E-49 | -1.69E-46 |
| MS.gene05952 | MS.gene37612 | 0.805389 | 1.37E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene37612 | 0.839636 | 1.41E-57 | -1.69E-46 |
| MS.gene059550 | MS.gene37612 | 0.802135 | 6.48E-49 | -1.69E-46 |
| MS.gene059584 | MS.gene37612 | 0.851626 | 7.85E-61 | -1.69E-46 |
| MS.gene059625 | MS.gene37612 | 0.823101 | 1.66E-53 | -1.69E-46 |
| MS.gene059842 | MS.gene37612 | 0.814177 | 1.76E-51 | -1.69E-46 |
| MS.gene05985 | MS.gene37612 | -0.818901 | 1.54E-52 | -1.69E-46 |
| MS.gene059935 | MS.gene37612 | 0.806814 | 6.85E-50 | -1.69E-46 |
| MS.gene060011 | MS.gene37612 | 0.826743 | 2.29E-54 | -1.69E-46 |
| MS.gene060012 | MS.gene37612 | 0.802202 | 6.27E-49 | -1.69E-46 |
| MS.gene060167 | MS.gene37612 | 0.832061 | 1.17E-55 | -1.69E-46 |
| MS.gene060257 | MS.gene37612 | 0.806362 | 8.54E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene37612 | 0.827083 | 1.90E-54 | -1.69E-46 |
| MS.gene060365 | MS.gene37612 | 0.834181 | 3.48E-56 | -1.69E-46 |
| MS.gene060373 | MS.gene37612 | 0.816384 | 5.69E-52 | -1.69E-46 |
| MS.gene060412 | MS.gene37612 | 0.800639 | 1.31E-48 | -1.69E-46 |
| MS.gene060521 | MS.gene37612 | 0.85087 | 1.28E-60 | -1.69E-46 |
| MS.gene06052 | MS.gene37612 | 0.817313 | 3.52E-52 | -1.69E-46 |
| MS.gene060572 | MS.gene37612 | 0.812908 | 3.35E-51 | -1.69E-46 |
| MS.gene060634 | MS.gene37612 | -0.83592 | 1.27E-56 | -1.69E-46 |
| MS.gene060777 | MS.gene37612 | 0.801116 | 1.05E-48 | -1.69E-46 |
| MS.gene060840 | MS.gene37612 | 0.805204 | 1.49E-49 | -1.69E-46 |
| MS.gene060879 | MS.gene37612 | 0.827766 | 1.31E-54 | -1.69E-46 |
| MS.gene060918 | MS.gene37612 | 0.801891 | 7.27E-49 | -1.69E-46 |
| MS.gene060919 | MS.gene37612 | 0.8252 | 5.34E-54 | -1.69E-46 |
| MS.gene060932 | MS.gene37612 | 0.800283 | 1.55E-48 | -1.69E-46 |
| MS.gene060935 | MS.gene37612 | 0.82929 | 5.59E-55 | -1.69E-46 |
| MS.gene060937 | MS.gene37612 | 0.823006 | 1.75E-53 | -1.69E-46 |
| MS.gene061040 | MS.gene37612 | -0.809145 | 2.19E-50 | -1.69E-46 |
| MS.gene061091 | MS.gene37612 | 0.800133 | 1.66E-48 | -1.69E-46 |
| MS.gene061188 | MS.gene37612 | 0.801265 | 9.77E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37612.t1 | MTR_5g088337 | 94.979 | 239 | 12 | 0 | 1 | 239 | 1 | 239 | 3.68e-169 | 467 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37612.t1 | AT2G26970 | 60.593 | 236 | 78 | 4 | 1 | 236 | 1 | 221 | 3.64e-101 | 293 |
| MS.gene37612.t1 | AT2G26970 | 58.898 | 236 | 78 | 2 | 1 | 236 | 1 | 217 | 1.75e-100 | 291 |
Find 45 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGAAGATCTCCGCCAATTT+TGG | 0.229266 | 5.3:-71158873 | None:intergenic |
| GCAGAAATACATGCCAAAAT+TGG | 0.239555 | 5.3:+71158860 | MS.gene37612:intron |
| CAACCTCCTTCTCTTCCTTC+TGG | 0.262802 | 5.3:+71155351 | MS.gene37612:CDS |
| ATCCATATTTGTCTGATTAC+AGG | 0.267713 | 5.3:+71156630 | MS.gene37612:CDS |
| CGTTATCATTTCTTGACCTT+TGG | 0.318803 | 5.3:-71159294 | None:intergenic |
| TATTGAAGTGGATAGAATTC+TGG | 0.339978 | 5.3:+71156783 | MS.gene37612:CDS |
| ATTACAGGTTACCTCTTGTC+TGG | 0.356384 | 5.3:+71156645 | MS.gene37612:CDS |
| AATATATACCTCCACCGATT+TGG | 0.364407 | 5.3:-71156839 | None:intergenic |
| GAATTCGTTAAGAAACATAT+TGG | 0.379765 | 5.3:+71158566 | MS.gene37612:CDS |
| GTTTGATGTATGACCAAATC+AGG | 0.394324 | 5.3:-71157589 | None:intergenic |
| AGGAAGAGAAGGAGGTTGAA+TGG | 0.397608 | 5.3:-71155346 | None:intergenic |
| TGAAAGAGAAGCTGAAGAAC+AGG | 0.404389 | 5.3:+71157834 | MS.gene37612:CDS |
| AACCTGTAATCAGACAAATA+TGG | 0.412327 | 5.3:-71156632 | None:intergenic |
| TCTCAGCTCTTTGCATTCGC+TGG | 0.486307 | 5.3:+71158922 | MS.gene37612:CDS |
| CAAACTAAGGAGTGCCTTGA+CGG | 0.488693 | 5.3:+71157607 | MS.gene37612:CDS |
| AGATGGAAACTTAACCAAAT+CGG | 0.490696 | 5.3:+71156825 | MS.gene37612:CDS |
| TGCATTCGCTGGTATCCTAA+AGG | 0.490721 | 5.3:+71158933 | MS.gene37612:CDS |
| AGTGGTGGAAAGAAAGCTAA+TGG | 0.513081 | 5.3:+71156566 | MS.gene37612:CDS |
| GGCAGGAAATTCGATATATG+TGG | 0.518560 | 5.3:+71158610 | MS.gene37612:CDS |
| TAAGGAGTGCCTTGACGGGA+TGG | 0.527772 | 5.3:+71157612 | MS.gene37612:CDS |
| GCCTTGACGGGATGGGAGAA+TGG | 0.534435 | 5.3:+71157620 | MS.gene37612:CDS |
| TGTGGATTTACAATATATGA+AGG | 0.536829 | 5.3:+71158628 | MS.gene37612:CDS |
| TTTCTTGGTGCAGGTAGTGG+TGG | 0.539229 | 5.3:+71156551 | MS.gene37612:intron |
| AGGTACTTACAAACCTCTCT+TGG | 0.539546 | 5.3:+71158589 | MS.gene37612:CDS |
| ACCTCTTGTCTGGATTGACT+TGG | 0.542563 | 5.3:+71156655 | MS.gene37612:CDS |
| ATTGCTTGTATAATTACAGA+TGG | 0.542610 | 5.3:+71156808 | MS.gene37612:CDS |
| TTTGGTCATACATCAAACTA+AGG | 0.543284 | 5.3:+71157594 | MS.gene37612:CDS |
| GGCGGAGATCTTCTCTCATG+TGG | 0.546349 | 5.3:+71158881 | MS.gene37612:CDS |
| GAAATACATGCCAAAATTGG+CGG | 0.553319 | 5.3:+71158863 | MS.gene37612:intron |
| AGCATACCAGAAGGAAGAGA+AGG | 0.556437 | 5.3:-71155357 | None:intergenic |
| AAACTAAGGAGTGCCTTGAC+GGG | 0.562071 | 5.3:+71157608 | MS.gene37612:CDS |
| ACTTACAAACCTCTCTTGGC+AGG | 0.564752 | 5.3:+71158593 | MS.gene37612:CDS |
| AAGGAGTGCCTTGACGGGAT+GGG | 0.565318 | 5.3:+71157613 | MS.gene37612:CDS |
| TGGATTGACTTGGAAATGAC+TGG | 0.570107 | 5.3:+71156665 | MS.gene37612:CDS |
| TTCGTTAAGAAACATATTGG+AGG | 0.577409 | 5.3:+71158569 | MS.gene37612:CDS |
| ATCGAATTTCCTGCCAAGAG+AGG | 0.584584 | 5.3:-71158602 | None:intergenic |
| AAACTTAACCAAATCGGTGG+AGG | 0.589283 | 5.3:+71156831 | MS.gene37612:CDS |
| TCCAAGTCAATCCAGACAAG+AGG | 0.594779 | 5.3:-71156656 | None:intergenic |
| AAAAGTCATCACGCTGCTAG+TGG | 0.595217 | 5.3:+71157646 | MS.gene37612:CDS |
| TGATATTAGAGAAAGTATTG+AGG | 0.606819 | 5.3:+71159239 | MS.gene37612:CDS |
| TGCAGGTTTGAATATTGAAG+TGG | 0.613241 | 5.3:+71156771 | MS.gene37612:intron |
| ACCATTCTCCCATCCCGTCA+AGG | 0.616339 | 5.3:-71157621 | None:intergenic |
| ATACCAGAAGGAAGAGAAGG+AGG | 0.632940 | 5.3:-71155354 | None:intergenic |
| TGGAAACTTAACCAAATCGG+TGG | 0.638946 | 5.3:+71156828 | MS.gene37612:CDS |
| TGAGGAACTCAAGTACTACA+AGG | 0.661289 | 5.3:+71159257 | MS.gene37612:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTATATAAAAATGACCA+AGG | + | chr5.3:71156007-71156026 | MS.gene37612:intron | 15.0% |
| !!! | AAAAATTCCATTTTTTACTT+TGG | + | chr5.3:71155572-71155591 | MS.gene37612:intron | 15.0% |
| !!! | ACATATTTGTATCTATTTTA+GGG | + | chr5.3:71157565-71157584 | MS.gene37612:intron | 15.0% |
| !!! | CACTTCTTTTTTTATTATTA+GGG | + | chr5.3:71155412-71155431 | MS.gene37612:intron | 15.0% |
| !!! | CTTACATTTCTATTTTAAAT+AGG | + | chr5.3:71157910-71157929 | MS.gene37612:intron | 15.0% |
| !!! | TACATATTTGTATCTATTTT+AGG | + | chr5.3:71157504-71157523 | MS.gene37612:intron | 15.0% |
| !!! | TCACTTCTTTTTTTATTATT+AGG | + | chr5.3:71155411-71155430 | MS.gene37612:intron | 15.0% |
| !!! | TCTACATATCAATTTATTTT+AGG | - | chr5.3:71157194-71157213 | None:intergenic | 15.0% |
| !! | AAAAGAGAGAAAATCTTTAT+TGG | + | chr5.3:71155815-71155834 | MS.gene37612:intron | 20.0% |
| !! | AAAGGGATTTAATAATGTTA+AGG | - | chr5.3:71157723-71157742 | None:intergenic | 20.0% |
| !! | ACAAATACACTACTTTATTA+TGG | - | chr5.3:71158665-71158684 | None:intergenic | 20.0% |
| !! | AGATTTACCAAAGTAAAAAA+TGG | - | chr5.3:71155582-71155601 | None:intergenic | 20.0% |
| !! | ATTAAGTTCATAAAGAATAC+TGG | + | chr5.3:71158079-71158098 | MS.gene37612:intron | 20.0% |
| !! | CAAATCATATTATGAGATAA+TGG | + | chr5.3:71158468-71158487 | MS.gene37612:intron | 20.0% |
| !! | GTGATATTATGAAATTTATC+AGG | + | chr5.3:71157363-71157382 | MS.gene37612:intron | 20.0% |
| !! | TCTACATATCAATTTATTGA+AGG | - | chr5.3:71157130-71157149 | None:intergenic | 20.0% |
| !! | TGATCAAAATAGATGAAAAA+CGG | + | chr5.3:71155855-71155874 | MS.gene37612:intron | 20.0% |
| !!! | AGTAAAAAACTGATTTAGTA+TGG | + | chr5.3:71157529-71157548 | MS.gene37612:intron | 20.0% |
| !!! | TAATTTGCATTTTGATTTGT+TGG | + | chr5.3:71157693-71157712 | MS.gene37612:intron | 20.0% |
| !!! | TCCAAAAGTATATTTAATTC+TGG | - | chr5.3:71159069-71159088 | None:intergenic | 20.0% |
| !!! | TCCAGAATTAAATATACTTT+TGG | + | chr5.3:71159065-71159084 | MS.gene37612:intron | 20.0% |
| !!! | TTTTTCATCTATTTTGATCA+GGG | - | chr5.3:71155855-71155874 | None:intergenic | 20.0% |
| ! | AAATTATCGAATTGGAGAAT+AGG | + | chr5.3:71156082-71156101 | MS.gene37612:intron | 25.0% |
| ! | AAGTACCTTCAAAACAAAAA+AGG | + | chr5.3:71159202-71159221 | MS.gene37612:CDS | 25.0% |
| ! | AAGTAGTTAAATAGGTGATT+TGG | + | chr5.3:71156166-71156185 | MS.gene37612:intron | 25.0% |
| ! | ACAATTTATGTGTTCTCAAA+AGG | - | chr5.3:71159143-71159162 | None:intergenic | 25.0% |
| ! | ATAACTCTCCTAATTCAAAA+CGG | - | chr5.3:71155985-71156004 | None:intergenic | 25.0% |
| ! | ATTGAATAACAGGGATAAAA+GGG | - | chr5.3:71155389-71155408 | None:intergenic | 25.0% |
| ! | ATTGCTTGTATAATTACAGA+TGG | + | chr5.3:71156808-71156827 | MS.gene37612:CDS | 25.0% |
| ! | CATTCAAAATTCAATTCAAC+AGG | - | chr5.3:71157750-71157769 | None:intergenic | 25.0% |
| ! | CATTTCAACAAAGGAATAAT+AGG | - | chr5.3:71158777-71158796 | None:intergenic | 25.0% |
| ! | GAAGGATCATATAAGTTTAA+GGG | - | chr5.3:71157112-71157131 | None:intergenic | 25.0% |
| ! | GAATTCGTTAAGAAACATAT+TGG | + | chr5.3:71158566-71158585 | MS.gene37612:CDS | 25.0% |
| ! | TAAAATGAAGTAAACCAACA+TGG | - | chr5.3:71155536-71155555 | None:intergenic | 25.0% |
| ! | TCAATTCAACAGGAAAAAAA+GGG | - | chr5.3:71157740-71157759 | None:intergenic | 25.0% |
| ! | TCGTTCTTAAATTATCGAAT+TGG | + | chr5.3:71156074-71156093 | MS.gene37612:intron | 25.0% |
| ! | TGAAGGATCATATAAGTTTA+AGG | - | chr5.3:71157113-71157132 | None:intergenic | 25.0% |
| ! | TGTGGATTTACAATATATGA+AGG | + | chr5.3:71158628-71158647 | MS.gene37612:CDS | 25.0% |
| ! | TTCAATTCAACAGGAAAAAA+AGG | - | chr5.3:71157741-71157760 | None:intergenic | 25.0% |
| !! | AATGTAATTAGCTCTTGATA+TGG | - | chr5.3:71158270-71158289 | None:intergenic | 25.0% |
| !! | ATGTAATTAGCTCTTGATAT+GGG | - | chr5.3:71158269-71158288 | None:intergenic | 25.0% |
| !! | CATATTATGAGATAATGGTT+TGG | + | chr5.3:71158473-71158492 | MS.gene37612:intron | 25.0% |
| !! | CTGTTGAATTGAATTTTGAA+TGG | + | chr5.3:71157748-71157767 | MS.gene37612:intron | 25.0% |
| !! | GTATTTAATTTCTCACCTTT+AGG | - | chr5.3:71158951-71158970 | None:intergenic | 25.0% |
| !! | TACAATATATGAAGGTATAC+AGG | + | chr5.3:71158636-71158655 | MS.gene37612:intron | 25.0% |
| !! | TTTTTCGTAAGAACTACTAT+CGG | - | chr5.3:71159104-71159123 | None:intergenic | 25.0% |
| !!! | AAAGCTTGTTAACTCTTTTT+CGG | + | chr5.3:71155296-71155315 | MS.gene37612:CDS | 25.0% |
| !!! | ATTACCAGTTCTAAAATTTC+TGG | + | chr5.3:71156456-71156475 | MS.gene37612:intron | 25.0% |
| !!! | CATCTCTTATTGATGATTTT+AGG | - | chr5.3:71158322-71158341 | None:intergenic | 25.0% |
| !!! | GATGATTTTAGGAAGAAATT+TGG | - | chr5.3:71158311-71158330 | None:intergenic | 25.0% |
| !!! | GGTATCATCAGTTTTATTTT+AGG | + | chr5.3:71158751-71158770 | MS.gene37612:intron | 25.0% |
| !!! | GTTTTTCATCTATTTTGATC+AGG | - | chr5.3:71155856-71155875 | None:intergenic | 25.0% |
| !!! | TATTTCCTCTGTTTTTCTAT+GGG | + | chr5.3:71156987-71157006 | MS.gene37612:intron | 25.0% |
| !!! | TGATATTAGAGAAAGTATTG+AGG | + | chr5.3:71159239-71159258 | MS.gene37612:CDS | 25.0% |
| !!! | TTATTTCCTCTGTTTTTCTA+TGG | + | chr5.3:71156986-71157005 | MS.gene37612:intron | 25.0% |
| !!! | TTTGGTAAATCTTTAAAGCA+CGG | + | chr5.3:71155590-71155609 | MS.gene37612:intron | 25.0% |
| !!! | TTTTGAATGGTATTGACTAA+TGG | + | chr5.3:71157761-71157780 | MS.gene37612:intron | 25.0% |
| AACCTGTAATCAGACAAATA+TGG | - | chr5.3:71156635-71156654 | None:intergenic | 30.0% | |
| AAGTTCATAAAGAATACTGG+CGG | + | chr5.3:71158082-71158101 | MS.gene37612:intron | 30.0% | |
| ACTACTATCGGACATTTATA+AGG | - | chr5.3:71159092-71159111 | None:intergenic | 30.0% | |
| AGAAGTGAAGATTGAATAAC+AGG | - | chr5.3:71155399-71155418 | None:intergenic | 30.0% | |
| AGATGGAAACTTAACCAAAT+CGG | + | chr5.3:71156825-71156844 | MS.gene37612:CDS | 30.0% | |
| ATCATTAGAGGAAAGATAAC+AGG | - | chr5.3:71158175-71158194 | None:intergenic | 30.0% | |
| ATCCATATTTGTCTGATTAC+AGG | + | chr5.3:71156630-71156649 | MS.gene37612:CDS | 30.0% | |
| ATCTTTCCTCTAATGATTCA+CGG | + | chr5.3:71158178-71158197 | MS.gene37612:intron | 30.0% | |
| ATGCATCTTCTATAGCTATA+TGG | + | chr5.3:71156383-71156402 | MS.gene37612:intron | 30.0% | |
| ATTCATTGTTACTAGATGGA+AGG | + | chr5.3:71157465-71157484 | MS.gene37612:intron | 30.0% | |
| ATTGTTGCTCATCATCATAA+GGG | + | chr5.3:71155908-71155927 | MS.gene37612:intron | 30.0% | |
| CAAATGTAACTTAAACAGCT+GGG | + | chr5.3:71158400-71158419 | MS.gene37612:intron | 30.0% | |
| CAGAATTCATTGTTACTAGA+TGG | + | chr5.3:71157461-71157480 | MS.gene37612:intron | 30.0% | |
| CATAAAAATGACAAGCAAAG+AGG | - | chr5.3:71156429-71156448 | None:intergenic | 30.0% | |
| CATGCTACAAGTAGTTAAAT+AGG | + | chr5.3:71156158-71156177 | MS.gene37612:intron | 30.0% | |
| CTGGAAAGAATCAATAAACA+AGG | - | chr5.3:71159050-71159069 | None:intergenic | 30.0% | |
| CTTTCAATAGATGAGAAACA+AGG | + | chr5.3:71158998-71159017 | MS.gene37612:intron | 30.0% | |
| GAAGTGAAGATTGAATAACA+GGG | - | chr5.3:71155398-71155417 | None:intergenic | 30.0% | |
| GATTGAATAACAGGGATAAA+AGG | - | chr5.3:71155390-71155409 | None:intergenic | 30.0% | |
| GCAATGAAACATTTCAACAA+AGG | - | chr5.3:71158786-71158805 | None:intergenic | 30.0% | |
| TAAGAATGAGACAGATGAAA+TGG | + | chr5.3:71157991-71158010 | MS.gene37612:intron | 30.0% | |
| TATGGTCATCTGTAAATTCT+TGG | + | chr5.3:71158730-71158749 | MS.gene37612:intron | 30.0% | |
| TATTGAAAGACTATGCACTA+AGG | - | chr5.3:71158987-71159006 | None:intergenic | 30.0% | |
| TATTGAAGTGGATAGAATTC+TGG | + | chr5.3:71156783-71156802 | MS.gene37612:CDS | 30.0% | |
| TCAACAATCAAAGTTAAGAC+AGG | - | chr5.3:71158808-71158827 | None:intergenic | 30.0% | |
| TCGATAATTTAAGAACGAAC+AGG | - | chr5.3:71156072-71156091 | None:intergenic | 30.0% | |
| TGAATCTGATTTCAGTTTCT+GGG | + | chr5.3:71156257-71156276 | MS.gene37612:intron | 30.0% | |
| TGATTAAGTTTCTACTTTGC+AGG | + | chr5.3:71158538-71158557 | MS.gene37612:intron | 30.0% | |
| TTAACTACTTGTAGCATGTT+TGG | - | chr5.3:71156156-71156175 | None:intergenic | 30.0% | |
| TTCGTTAAGAAACATATTGG+AGG | + | chr5.3:71158569-71158588 | MS.gene37612:CDS | 30.0% | |
| TTTGGTCATACATCAAACTA+AGG | + | chr5.3:71157594-71157613 | MS.gene37612:CDS | 30.0% | |
| ! | TAATGGTTTTCAATGAATGC+AGG | + | chr5.3:71157778-71157797 | MS.gene37612:intron | 30.0% |
| ! | TTTTAAACTCTACTAGCACT+TGG | - | chr5.3:71157087-71157106 | None:intergenic | 30.0% |
| !! | ATAGTTGGTTTCTGGTTATA+CGG | + | chr5.3:71159023-71159042 | MS.gene37612:intron | 30.0% |
| !! | TCTTGTTTCTCATTTTTCAC+TGG | - | chr5.3:71156602-71156621 | None:intergenic | 30.0% |
| !!! | TGCTTTTTCCGTTTTGAATT+AGG | + | chr5.3:71155974-71155993 | MS.gene37612:intron | 30.0% |
| AACACGATACTGACATGTAT+CGG | + | chr5.3:71155625-71155644 | MS.gene37612:intron | 35.0% | |
| AAGATAACAGGTTCTGTGAT+AGG | - | chr5.3:71158163-71158182 | None:intergenic | 35.0% | |
| ACCAAGCATAGGTGTTTAAT+CGG | - | chr5.3:71156317-71156336 | None:intergenic | 35.0% | |
| ACTGAAATCAGATTCACTGA+AGG | - | chr5.3:71156253-71156272 | None:intergenic | 35.0% | |
| AGGAAATAAGCCTAAAAAGG+AGG | - | chr5.3:71156975-71156994 | None:intergenic | 35.0% | |
| AGTTCATAAAGAATACTGGC+GGG | + | chr5.3:71158083-71158102 | MS.gene37612:intron | 35.0% | |
| ATAAAAATGACCAAGGCATG+AGG | + | chr5.3:71156014-71156033 | MS.gene37612:intron | 35.0% | |
| ATACATGTCAGTATCGTGTT+CGG | - | chr5.3:71155625-71155644 | None:intergenic | 35.0% | |
| ATGCACTAAGGTTCATCATA+CGG | - | chr5.3:71158975-71158994 | None:intergenic | 35.0% | |
| CAGAGGAAATAAGCCTAAAA+AGG | - | chr5.3:71156978-71156997 | None:intergenic | 35.0% | |
| CATAACAGAATCTTGCATTG+AGG | - | chr5.3:71156291-71156310 | None:intergenic | 35.0% | |
| CTTGAAGAGTTAATCGAGAA+GGG | + | chr5.3:71157302-71157321 | MS.gene37612:intron | 35.0% | |
| GAAATACATGCCAAAATTGG+CGG | + | chr5.3:71158863-71158882 | MS.gene37612:intron | 35.0% | |
| GAAATGAAGATGCACAATCA+TGG | + | chr5.3:71155744-71155763 | MS.gene37612:intron | 35.0% | |
| GAATGCAGGCTTAACAAAAA+AGG | + | chr5.3:71157792-71157811 | MS.gene37612:intron | 35.0% | |
| GATTGTTGCTCATCATCATA+AGG | + | chr5.3:71155907-71155926 | MS.gene37612:intron | 35.0% | |
| GCAAATGTAACTTAAACAGC+TGG | + | chr5.3:71158399-71158418 | MS.gene37612:intron | 35.0% | |
| GCAGAAATACATGCCAAAAT+TGG | + | chr5.3:71158860-71158879 | MS.gene37612:intron | 35.0% | |
| GTATAACCAGAAACCAACTA+TGG | - | chr5.3:71159024-71159043 | None:intergenic | 35.0% | |
| GTATTTCATGTCTACCATGT+TGG | + | chr5.3:71155519-71155538 | MS.gene37612:intron | 35.0% | |
| GTGAATCTGATTTCAGTTTC+TGG | + | chr5.3:71156256-71156275 | MS.gene37612:intron | 35.0% | |
| GTTTGATGTATGACCAAATC+AGG | - | chr5.3:71157592-71157611 | None:intergenic | 35.0% | |
| TCTTGAAGAGTTAATCGAGA+AGG | + | chr5.3:71157301-71157320 | MS.gene37612:intron | 35.0% | |
| TGCAGGTTTGAATATTGAAG+TGG | + | chr5.3:71156771-71156790 | MS.gene37612:intron | 35.0% | |
| TTGCAAACACTTAACAGCTA+TGG | - | chr5.3:71158383-71158402 | None:intergenic | 35.0% | |
| TTTGCAATGACTGACATCAT+TGG | - | chr5.3:71158452-71158471 | None:intergenic | 35.0% | |
| ! | AATATATACCTCCACCGATT+TGG | - | chr5.3:71156842-71156861 | None:intergenic | 35.0% |
| ! | ATCATAAGGGTATGTTTGCA+TGG | + | chr5.3:71155921-71155940 | MS.gene37612:intron | 35.0% |
| ! | CTAGTATCTTCCTCCTTTTT+AGG | + | chr5.3:71156962-71156981 | MS.gene37612:intron | 35.0% |
| ! | GTTTTCCCATAGAAAAACAG+AGG | - | chr5.3:71156995-71157014 | None:intergenic | 35.0% |
| ! | TAAACCTTTTGTGTGTTTGC+AGG | + | chr5.3:71156754-71156773 | MS.gene37612:intron | 35.0% |
| ! | TCTCTTTTCTACAACCTAGT+GGG | - | chr5.3:71155803-71155822 | None:intergenic | 35.0% |
| !! | AAATCTTTAAAGCACGGACA+TGG | + | chr5.3:71155596-71155615 | MS.gene37612:intron | 35.0% |
| !! | TGACATCATTGGCTTGATAT+AGG | - | chr5.3:71158441-71158460 | None:intergenic | 35.0% |
| !!! | CTGTGCCTTTTTTGTTTTGA+AGG | - | chr5.3:71159210-71159229 | None:intergenic | 35.0% |
| !!! | TCTATTTTAGGGTCCTGATT+TGG | + | chr5.3:71157576-71157595 | MS.gene37612:intron | 35.0% |
| !!! | TGGTCCAGAAATTTTAGAAC+TGG | - | chr5.3:71156463-71156482 | None:intergenic | 35.0% |
| AAACTTAACCAAATCGGTGG+AGG | + | chr5.3:71156831-71156850 | MS.gene37612:CDS | 40.0% | |
| AAGAGGTAACGCATAAGCAT+AGG | - | chr5.3:71156412-71156431 | None:intergenic | 40.0% | |
| ACACGATACTGACATGTATC+GGG | + | chr5.3:71155626-71155645 | MS.gene37612:intron | 40.0% | |
| AGGTACTTACAAACCTCTCT+TGG | + | chr5.3:71158589-71158608 | MS.gene37612:CDS | 40.0% | |
| ATGAGAAACAAGGCCATAGT+TGG | + | chr5.3:71159008-71159027 | MS.gene37612:intron | 40.0% | |
| ATGGAGGAGTTTGAAAGGAA+AGG | - | chr5.3:71156133-71156152 | None:intergenic | 40.0% | |
| ATTACAGGTTACCTCTTGTC+TGG | + | chr5.3:71156645-71156664 | MS.gene37612:CDS | 40.0% | |
| CAAACCTGCAAACACACAAA+AGG | - | chr5.3:71156761-71156780 | None:intergenic | 40.0% | |
| CAGCATCTCTGCATATAGAT+GGG | + | chr5.3:71158044-71158063 | MS.gene37612:intron | 40.0% | |
| CATCTATATGCAGAGATGCT+GGG | - | chr5.3:71158045-71158064 | None:intergenic | 40.0% | |
| CTAACACCGTGAATCATTAG+AGG | - | chr5.3:71158187-71158206 | None:intergenic | 40.0% | |
| CTACTTGTAGCATGTTTGGA+TGG | - | chr5.3:71156152-71156171 | None:intergenic | 40.0% | |
| CTTACAAGCACCTAAATCTC+AGG | - | chr5.3:71157042-71157061 | None:intergenic | 40.0% | |
| CTTGATATGGGATCACAAAC+TGG | - | chr5.3:71158257-71158276 | None:intergenic | 40.0% | |
| GAAGATGCACAATCATGGTA+TGG | + | chr5.3:71155749-71155768 | MS.gene37612:intron | 40.0% | |
| GAAGATTGTCTTCTTGCATC+AGG | + | chr5.3:71156903-71156922 | MS.gene37612:intron | 40.0% | |
| GATCAGTGCATTGAAACTTC+TGG | + | chr5.3:71156730-71156749 | MS.gene37612:intron | 40.0% | |
| GATCGTTTCTCTACAGAATG+TGG | + | chr5.3:71158341-71158360 | MS.gene37612:intron | 40.0% | |
| GCAGCTGCAATATACTTTCT+TGG | + | chr5.3:71156536-71156555 | MS.gene37612:intron | 40.0% | |
| GGCAGGAAATTCGATATATG+TGG | + | chr5.3:71158610-71158629 | MS.gene37612:CDS | 40.0% | |
| TGAAAGAGAAGCTGAAGAAC+AGG | + | chr5.3:71157834-71157853 | MS.gene37612:CDS | 40.0% | |
| TGAGGAACTCAAGTACTACA+AGG | + | chr5.3:71159257-71159276 | MS.gene37612:CDS | 40.0% | |
| TGCGAAATCGAAGTAAAGAC+AGG | - | chr5.3:71158843-71158862 | None:intergenic | 40.0% | |
| TGGAAACTTAACCAAATCGG+TGG | + | chr5.3:71156828-71156847 | MS.gene37612:CDS | 40.0% | |
| TTCCTCAACACACAAATCAC+AGG | - | chr5.3:71155727-71155746 | None:intergenic | 40.0% | |
| TTCTACAACCTAGTGGGATA+AGG | - | chr5.3:71155797-71155816 | None:intergenic | 40.0% | |
| TTTGGATGGAGGAGTTTGAA+AGG | - | chr5.3:71156138-71156157 | None:intergenic | 40.0% | |
| ! | ACAAAAAAGGCACAGAGCTT+TGG | + | chr5.3:71159215-71159234 | MS.gene37612:CDS | 40.0% |
| ! | AGTGGTGGAAAGAAAGCTAA+TGG | + | chr5.3:71156566-71156585 | MS.gene37612:CDS | 40.0% |
| ! | ATAAGGGTATGTTTGCATGG+AGG | + | chr5.3:71155924-71155943 | MS.gene37612:intron | 40.0% |
| ! | CTCTCTTTTCTACAACCTAG+TGG | - | chr5.3:71155804-71155823 | None:intergenic | 40.0% |
| ! | GCAATATACTTTCTTGGTGC+AGG | + | chr5.3:71156542-71156561 | MS.gene37612:intron | 40.0% |
| ! | TAAGGGTATGTTTGCATGGA+GGG | + | chr5.3:71155925-71155944 | MS.gene37612:intron | 40.0% |
| ! | TATGTTTGCATGGAGGGTTT+TGG | + | chr5.3:71155931-71155950 | MS.gene37612:intron | 40.0% |
| !! | AGAATGTGTTACTTCGAGAG+TGG | + | chr5.3:71156697-71156716 | MS.gene37612:intron | 40.0% |
| !! | CATCGATTCACGTGTTGATA+TGG | + | chr5.3:71158712-71158731 | MS.gene37612:intron | 40.0% |
| !! | CATTGGCTTGATATAGGAGT+AGG | - | chr5.3:71158435-71158454 | None:intergenic | 40.0% |
| !! | TGGATTGACTTGGAAATGAC+TGG | + | chr5.3:71156665-71156684 | MS.gene37612:CDS | 40.0% |
| AAAAGTCATCACGCTGCTAG+TGG | + | chr5.3:71157646-71157665 | MS.gene37612:CDS | 45.0% | |
| AAGCACCTAAATCTCAGGCA+AGG | - | chr5.3:71157037-71157056 | None:intergenic | 45.0% | |
| AAGTGTTCCAGAGCCTAAGT+GGG | + | chr5.3:71156192-71156211 | MS.gene37612:intron | 45.0% | |
| ACACAGCCACATGTAAGCAT+TGG | - | chr5.3:71156483-71156502 | None:intergenic | 45.0% | |
| ACCTCTTGTCTGGATTGACT+TGG | + | chr5.3:71156655-71156674 | MS.gene37612:CDS | 45.0% | |
| ACTGATGACTCAACGACCAA+AGG | - | chr5.3:71156342-71156361 | None:intergenic | 45.0% | |
| ACTTACAAACCTCTCTTGGC+AGG | + | chr5.3:71158593-71158612 | MS.gene37612:CDS | 45.0% | |
| AGCACGTCAATCACATGGTA+TGG | - | chr5.3:71157875-71157894 | None:intergenic | 45.0% | |
| AGCATACCAGAAGGAAGAGA+AGG | - | chr5.3:71155360-71155379 | None:intergenic | 45.0% | |
| AGCTTAATGTCCTCATGCCT+TGG | - | chr5.3:71156027-71156046 | None:intergenic | 45.0% | |
| AGGAAGAGAAGGAGGTTGAA+TGG | - | chr5.3:71155349-71155368 | None:intergenic | 45.0% | |
| AGGGACAGTGTACAGGAAAA+AGG | - | chr5.3:71158502-71158521 | None:intergenic | 45.0% | |
| ATACCAGAAGGAAGAGAAGG+AGG | - | chr5.3:71155357-71155376 | None:intergenic | 45.0% | |
| ATCAGTTGCCTCACAGATCA+AGG | - | chr5.3:71158522-71158541 | None:intergenic | 45.0% | |
| ATCGAATTTCCTGCCAAGAG+AGG | - | chr5.3:71158605-71158624 | None:intergenic | 45.0% | |
| CACGATACTGACATGTATCG+GGG | + | chr5.3:71155627-71155646 | MS.gene37612:intron | 45.0% | |
| CCAGCATCTCTGCATATAGA+TGG | + | chr5.3:71158043-71158062 | MS.gene37612:intron | 45.0% | |
| CCATCTATATGCAGAGATGC+TGG | - | chr5.3:71158046-71158065 | None:intergenic | 45.0% | |
| CCTTGTTAGAGAACTCTTGG+CGG | + | chr5.3:71158113-71158132 | MS.gene37612:intron | 45.0% | |
| CTTGTAGCATGTTTGGATGG+AGG | - | chr5.3:71156149-71156168 | None:intergenic | 45.0% | |
| GCCGATTAAACACCTATGCT+TGG | + | chr5.3:71156313-71156332 | MS.gene37612:intron | 45.0% | |
| GGAAGATACTAGCTAGAGAC+TGG | - | chr5.3:71156954-71156973 | None:intergenic | 45.0% | |
| GGTCCTTGTTAGAGAACTCT+TGG | + | chr5.3:71158110-71158129 | MS.gene37612:intron | 45.0% | |
| TAAAGAATACTGGCGGGACT+CGG | + | chr5.3:71158089-71158108 | MS.gene37612:intron | 45.0% | |
| TAAGTGTTCCAGAGCCTAAG+TGG | + | chr5.3:71156191-71156210 | MS.gene37612:intron | 45.0% | |
| TCAGTTGCCTCACAGATCAA+GGG | - | chr5.3:71158521-71158540 | None:intergenic | 45.0% | |
| TCCAAGTCAATCCAGACAAG+AGG | - | chr5.3:71156659-71156678 | None:intergenic | 45.0% | |
| TCCCCTCCTCCTTCAAATAA+GGG | - | chr5.3:71157414-71157433 | None:intergenic | 45.0% | |
| TCTGGACCAATGCTTACATG+TGG | + | chr5.3:71156474-71156493 | MS.gene37612:intron | 45.0% | |
| TGCATTCGCTGGTATCCTAA+AGG | + | chr5.3:71158933-71158952 | MS.gene37612:CDS | 45.0% | |
| TTCCCCTCCTCCTTCAAATA+AGG | - | chr5.3:71157415-71157434 | None:intergenic | 45.0% | |
| TTTGGAGGGAAAGGAAAGGA+TGG | + | chr5.3:71155949-71155968 | MS.gene37612:intron | 45.0% | |
| ! | AAGAGAGCACGTCAATCACA+TGG | - | chr5.3:71157880-71157899 | None:intergenic | 45.0% |
| ! | ACAAGGCCATAGTTGGTTTC+TGG | + | chr5.3:71159015-71159034 | MS.gene37612:intron | 45.0% |
| ! | ACCCTTATTTGAAGGAGGAG+GGG | + | chr5.3:71157410-71157429 | MS.gene37612:intron | 45.0% |
| ! | AGCCTGTGATTTGTGTGTTG+AGG | + | chr5.3:71155722-71155741 | MS.gene37612:intron | 45.0% |
| ! | ATTGACGTGCTCTCTTTTCG+TGG | + | chr5.3:71157884-71157903 | MS.gene37612:intron | 45.0% |
| ! | CACCCTTATTTGAAGGAGGA+GGG | + | chr5.3:71157409-71157428 | MS.gene37612:intron | 45.0% |
| ! | GAGAAGATCTCCGCCAATTT+TGG | - | chr5.3:71158876-71158895 | None:intergenic | 45.0% |
| ! | TACTTTCTTGGTGCAGGTAG+TGG | + | chr5.3:71156548-71156567 | MS.gene37612:intron | 45.0% |
| ! | TTGACGTGCTCTCTTTTCGT+GGG | + | chr5.3:71157885-71157904 | MS.gene37612:intron | 45.0% |
| !! | AAACTAAGGAGTGCCTTGAC+GGG | + | chr5.3:71157608-71157627 | MS.gene37612:CDS | 45.0% |
| !! | ATCTGAAGTGTCGATGCTAC+AGG | + | chr5.3:71155667-71155686 | MS.gene37612:intron | 45.0% |
| !! | CAAACTAAGGAGTGCCTTGA+CGG | + | chr5.3:71157607-71157626 | MS.gene37612:CDS | 45.0% |
| !! | TCTGAAGTGTCGATGCTACA+GGG | + | chr5.3:71155668-71155687 | MS.gene37612:intron | 45.0% |
| !!! | TTTGCATGGAGGGTTTTGGA+GGG | + | chr5.3:71155935-71155954 | MS.gene37612:intron | 45.0% |
| ACACTGTCCCTTGATCTGTG+AGG | + | chr5.3:71158511-71158530 | MS.gene37612:intron | 50.0% | |
| ACCTAAATCTCAGGCAAGGC+GGG | - | chr5.3:71157033-71157052 | None:intergenic | 50.0% | |
| ACTGACATGTATCGGGGTAG+CGG | + | chr5.3:71155633-71155652 | MS.gene37612:intron | 50.0% | |
| AGTGTTCCAGAGCCTAAGTG+GGG | + | chr5.3:71156193-71156212 | MS.gene37612:intron | 50.0% | |
| CAACCTCCTTCTCTTCCTTC+TGG | + | chr5.3:71155351-71155370 | MS.gene37612:CDS | 50.0% | |
| CACCTAAATCTCAGGCAAGG+CGG | - | chr5.3:71157034-71157053 | None:intergenic | 50.0% | |
| CAGATCAAGGGACAGTGTAC+AGG | - | chr5.3:71158509-71158528 | None:intergenic | 50.0% | |
| CCGCCAAGAGTTCTCTAACA+AGG | - | chr5.3:71158116-71158135 | None:intergenic | 50.0% | |
| CCTCCTCCTTCAAATAAGGG+TGG | - | chr5.3:71157411-71157430 | None:intergenic | 50.0% | |
| CCTCCTTCAAATAAGGGTGG+AGG | - | chr5.3:71157408-71157427 | None:intergenic | 50.0% | |
| GACCAAAGGCTACCAAGCAT+AGG | - | chr5.3:71156328-71156347 | None:intergenic | 50.0% | |
| GGGTAGAGTAGCATACCAGA+AGG | - | chr5.3:71155369-71155388 | None:intergenic | 50.0% | |
| TCTCAGCTCTTTGCATTCGC+TGG | + | chr5.3:71158922-71158941 | MS.gene37612:CDS | 50.0% | |
| TGGTCGTTGAGTCATCAGTG+AGG | + | chr5.3:71156343-71156362 | MS.gene37612:intron | 50.0% | |
| TTCTTCCTGCATCCCCACTT+AGG | - | chr5.3:71156208-71156227 | None:intergenic | 50.0% | |
| ! | CAATCGAGCCTTATCCCACT+AGG | + | chr5.3:71155786-71155805 | MS.gene37612:intron | 50.0% |
| ! | CACCTATGCTTGGTAGCCTT+TGG | + | chr5.3:71156323-71156342 | MS.gene37612:intron | 50.0% |
| ! | CCACCCTTATTTGAAGGAGG+AGG | + | chr5.3:71157408-71157427 | MS.gene37612:intron | 50.0% |
| ! | CCTCCACCCTTATTTGAAGG+AGG | + | chr5.3:71157405-71157424 | MS.gene37612:intron | 50.0% |
| ! | TCGCCTCCACCCTTATTTGA+AGG | + | chr5.3:71157402-71157421 | MS.gene37612:intron | 50.0% |
| ! | TTTCTTGGTGCAGGTAGTGG+TGG | + | chr5.3:71156551-71156570 | MS.gene37612:intron | 50.0% |
| !! | GTTTGCATGGAGGGTTTTGG+AGG | + | chr5.3:71155934-71155953 | MS.gene37612:intron | 50.0% |
| !!! | ATGGAGGGTTTTGGAGGGAA+AGG | + | chr5.3:71155940-71155959 | MS.gene37612:intron | 50.0% |
| !!! | GGGTTTTGGAGGGAAAGGAA+AGG | + | chr5.3:71155945-71155964 | MS.gene37612:intron | 50.0% |
| ACCATTCTCCCATCCCGTCA+AGG | - | chr5.3:71157624-71157643 | None:intergenic | 55.0% | |
| ACCCGCCTTGCCTGAGATTT+AGG | + | chr5.3:71157029-71157048 | MS.gene37612:intron | 55.0% | |
| CTGACATGTATCGGGGTAGC+GGG | + | chr5.3:71155634-71155653 | MS.gene37612:intron | 55.0% | |
| GGCGGAGATCTTCTCTCATG+TGG | + | chr5.3:71158881-71158900 | MS.gene37612:CDS | 55.0% | |
| !! | AAGGAGTGCCTTGACGGGAT+GGG | + | chr5.3:71157613-71157632 | MS.gene37612:CDS | 55.0% |
| !! | ATCTCAGGCAAGGCGGGTTA+TGG | - | chr5.3:71157027-71157046 | None:intergenic | 55.0% |
| !! | TAAGGAGTGCCTTGACGGGA+TGG | + | chr5.3:71157612-71157631 | MS.gene37612:CDS | 55.0% |
| CAGAGCCTAAGTGGGGATGC+AGG | + | chr5.3:71156200-71156219 | MS.gene37612:intron | 60.0% | |
| CTGCATCCCCACTTAGGCTC+TGG | - | chr5.3:71156202-71156221 | None:intergenic | 60.0% | |
| GCCTTGACGGGATGGGAGAA+TGG | + | chr5.3:71157620-71157639 | MS.gene37612:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 71155291 | 71159311 | 71155291 | ID=MS.gene37612 |
| chr5.3 | mRNA | 71155291 | 71159311 | 71155291 | ID=MS.gene37612.t1;Parent=MS.gene37612 |
| chr5.3 | exon | 71155291 | 71155372 | 71155291 | ID=MS.gene37612.t1.exon1;Parent=MS.gene37612.t1 |
| chr5.3 | CDS | 71155291 | 71155372 | 71155291 | ID=cds.MS.gene37612.t1;Parent=MS.gene37612.t1 |
| chr5.3 | exon | 71156564 | 71156686 | 71156564 | ID=MS.gene37612.t1.exon2;Parent=MS.gene37612.t1 |
| chr5.3 | CDS | 71156564 | 71156686 | 71156564 | ID=cds.MS.gene37612.t1;Parent=MS.gene37612.t1 |
| chr5.3 | exon | 71156776 | 71156852 | 71156776 | ID=MS.gene37612.t1.exon3;Parent=MS.gene37612.t1 |
| chr5.3 | CDS | 71156776 | 71156852 | 71156776 | ID=cds.MS.gene37612.t1;Parent=MS.gene37612.t1 |
| chr5.3 | exon | 71157586 | 71157667 | 71157586 | ID=MS.gene37612.t1.exon4;Parent=MS.gene37612.t1 |
| chr5.3 | CDS | 71157586 | 71157667 | 71157586 | ID=cds.MS.gene37612.t1;Parent=MS.gene37612.t1 |
| chr5.3 | exon | 71157800 | 71157855 | 71157800 | ID=MS.gene37612.t1.exon5;Parent=MS.gene37612.t1 |
| chr5.3 | CDS | 71157800 | 71157855 | 71157800 | ID=cds.MS.gene37612.t1;Parent=MS.gene37612.t1 |
| chr5.3 | exon | 71158560 | 71158649 | 71158560 | ID=MS.gene37612.t1.exon6;Parent=MS.gene37612.t1 |
| chr5.3 | CDS | 71158560 | 71158649 | 71158560 | ID=cds.MS.gene37612.t1;Parent=MS.gene37612.t1 |
| chr5.3 | exon | 71158864 | 71158954 | 71158864 | ID=MS.gene37612.t1.exon7;Parent=MS.gene37612.t1 |
| chr5.3 | CDS | 71158864 | 71158954 | 71158864 | ID=cds.MS.gene37612.t1;Parent=MS.gene37612.t1 |
| chr5.3 | exon | 71159193 | 71159311 | 71159193 | ID=MS.gene37612.t1.exon8;Parent=MS.gene37612.t1 |
| chr5.3 | CDS | 71159193 | 71159311 | 71159193 | ID=cds.MS.gene37612.t1;Parent=MS.gene37612.t1 |
| Gene Sequence |
| Protein sequence |
