Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06372.t1 | XP_003602656.1 | 100 | 217 | 0 | 0 | 1 | 217 | 1 | 217 | 2.20E-94 | 355.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06372.t1 | Q8GXN6 | 63.6 | 220 | 76 | 2 | 1 | 217 | 1 | 219 | 2.3e-63 | 243.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06372.t1 | G7JC58 | 100.0 | 217 | 0 | 0 | 1 | 217 | 1 | 217 | 1.6e-94 | 355.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene06372 | 0.855128 | 7.76E-62 | -1.69E-46 |
| MS.gene04918 | MS.gene06372 | 0.816595 | 5.10E-52 | -1.69E-46 |
| MS.gene04920 | MS.gene06372 | 0.82147 | 3.97E-53 | -1.69E-46 |
| MS.gene049254 | MS.gene06372 | 0.97739 | 1.10E-143 | -1.69E-46 |
| MS.gene049264 | MS.gene06372 | 0.80156 | 8.50E-49 | -1.69E-46 |
| MS.gene049283 | MS.gene06372 | 0.829774 | 4.26E-55 | -1.69E-46 |
| MS.gene049343 | MS.gene06372 | 0.807541 | 4.81E-50 | -1.69E-46 |
| MS.gene049368 | MS.gene06372 | 0.807844 | 4.15E-50 | -1.69E-46 |
| MS.gene049404 | MS.gene06372 | 0.818875 | 1.56E-52 | -1.69E-46 |
| MS.gene049499 | MS.gene06372 | 0.858445 | 8.20E-63 | -1.69E-46 |
| MS.gene049567 | MS.gene06372 | 0.817135 | 3.86E-52 | -1.69E-46 |
| MS.gene049652 | MS.gene06372 | 0.815788 | 7.73E-52 | -1.69E-46 |
| MS.gene049711 | MS.gene06372 | 0.833231 | 6.01E-56 | -1.69E-46 |
| MS.gene049807 | MS.gene06372 | 0.812826 | 3.49E-51 | -1.69E-46 |
| MS.gene049977 | MS.gene06372 | 0.804084 | 2.56E-49 | -1.69E-46 |
| MS.gene049983 | MS.gene06372 | 0.853213 | 2.77E-61 | -1.69E-46 |
| MS.gene050559 | MS.gene06372 | 0.845631 | 3.60E-59 | -1.69E-46 |
| MS.gene050561 | MS.gene06372 | 0.844332 | 8.07E-59 | -1.69E-46 |
| MS.gene050562 | MS.gene06372 | 0.841159 | 5.63E-58 | -1.69E-46 |
| MS.gene051198 | MS.gene06372 | 0.801989 | 6.94E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene06372 | 0.81145 | 6.96E-51 | -1.69E-46 |
| MS.gene051279 | MS.gene06372 | 0.818587 | 1.81E-52 | -1.69E-46 |
| MS.gene051332 | MS.gene06372 | 0.851337 | 9.48E-61 | -1.69E-46 |
| MS.gene051490 | MS.gene06372 | 0.832218 | 1.07E-55 | -1.69E-46 |
| MS.gene051492 | MS.gene06372 | 0.805811 | 1.11E-49 | -1.69E-46 |
| MS.gene051543 | MS.gene06372 | 0.808808 | 2.58E-50 | -1.69E-46 |
| MS.gene051699 | MS.gene06372 | 0.804846 | 1.78E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene06372 | 0.870294 | 1.63E-66 | -1.69E-46 |
| MS.gene051832 | MS.gene06372 | 0.817351 | 3.45E-52 | -1.69E-46 |
| MS.gene051975 | MS.gene06372 | 0.8303 | 3.17E-55 | -1.69E-46 |
| MS.gene052016 | MS.gene06372 | 0.810956 | 8.91E-51 | -1.69E-46 |
| MS.gene052037 | MS.gene06372 | 0.833724 | 4.52E-56 | -1.69E-46 |
| MS.gene052108 | MS.gene06372 | 0.834262 | 3.32E-56 | -1.69E-46 |
| MS.gene052118 | MS.gene06372 | 0.813567 | 2.40E-51 | -1.69E-46 |
| MS.gene052239 | MS.gene06372 | -0.815526 | 8.84E-52 | -1.69E-46 |
| MS.gene052307 | MS.gene06372 | 0.807526 | 4.84E-50 | -1.69E-46 |
| MS.gene052463 | MS.gene06372 | 0.856235 | 3.69E-62 | -1.69E-46 |
| MS.gene052493 | MS.gene06372 | 0.848475 | 5.99E-60 | -1.69E-46 |
| MS.gene052516 | MS.gene06372 | 0.804 | 2.66E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene06372 | 0.831671 | 1.46E-55 | -1.69E-46 |
| MS.gene052533 | MS.gene06372 | 0.844649 | 6.64E-59 | -1.69E-46 |
| MS.gene052534 | MS.gene06372 | 0.84654 | 2.04E-59 | -1.69E-46 |
| MS.gene052582 | MS.gene06372 | 0.831002 | 2.14E-55 | -1.69E-46 |
| MS.gene052584 | MS.gene06372 | 0.839722 | 1.34E-57 | -1.69E-46 |
| MS.gene052586 | MS.gene06372 | 0.804671 | 1.93E-49 | -1.69E-46 |
| MS.gene052674 | MS.gene06372 | 0.812318 | 4.50E-51 | -1.69E-46 |
| MS.gene052675 | MS.gene06372 | 0.812065 | 5.11E-51 | -1.69E-46 |
| MS.gene052677 | MS.gene06372 | 0.811474 | 6.87E-51 | -1.69E-46 |
| MS.gene052685 | MS.gene06372 | 0.809278 | 2.05E-50 | -1.69E-46 |
| MS.gene052773 | MS.gene06372 | 0.816817 | 4.55E-52 | -1.69E-46 |
| MS.gene052855 | MS.gene06372 | 0.817249 | 3.64E-52 | -1.69E-46 |
| MS.gene052954 | MS.gene06372 | 0.812098 | 5.03E-51 | -1.69E-46 |
| MS.gene053006 | MS.gene06372 | 0.817725 | 2.84E-52 | -1.69E-46 |
| MS.gene053045 | MS.gene06372 | 0.800187 | 1.62E-48 | -1.69E-46 |
| MS.gene053079 | MS.gene06372 | 0.831721 | 1.42E-55 | -1.69E-46 |
| MS.gene053094 | MS.gene06372 | 0.803194 | 3.92E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene06372 | 0.836724 | 7.91E-57 | -1.69E-46 |
| MS.gene053272 | MS.gene06372 | -0.803239 | 3.83E-49 | -1.69E-46 |
| MS.gene053296 | MS.gene06372 | 0.809975 | 1.45E-50 | -1.69E-46 |
| MS.gene053298 | MS.gene06372 | 0.823568 | 1.29E-53 | -1.69E-46 |
| MS.gene053963 | MS.gene06372 | 0.828695 | 7.79E-55 | -1.69E-46 |
| MS.gene05410 | MS.gene06372 | 0.803409 | 3.54E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene06372 | 0.830749 | 2.46E-55 | -1.69E-46 |
| MS.gene054222 | MS.gene06372 | 0.826313 | 2.90E-54 | -1.69E-46 |
| MS.gene054236 | MS.gene06372 | 0.809564 | 1.78E-50 | -1.69E-46 |
| MS.gene05423 | MS.gene06372 | 0.840067 | 1.09E-57 | -1.69E-46 |
| MS.gene054479 | MS.gene06372 | 0.847497 | 1.11E-59 | -1.69E-46 |
| MS.gene054576 | MS.gene06372 | 0.850475 | 1.66E-60 | -1.69E-46 |
| MS.gene05458 | MS.gene06372 | 0.81324 | 2.83E-51 | -1.69E-46 |
| MS.gene054651 | MS.gene06372 | 0.860516 | 1.96E-63 | -1.69E-46 |
| MS.gene054775 | MS.gene06372 | 0.826714 | 2.33E-54 | -1.69E-46 |
| MS.gene054892 | MS.gene06372 | 0.829752 | 4.32E-55 | -1.69E-46 |
| MS.gene054893 | MS.gene06372 | 0.833468 | 5.24E-56 | -1.69E-46 |
| MS.gene054991 | MS.gene06372 | 0.8347 | 2.57E-56 | -1.69E-46 |
| MS.gene055227 | MS.gene06372 | 0.805312 | 1.42E-49 | -1.69E-46 |
| MS.gene055228 | MS.gene06372 | 0.82691 | 2.09E-54 | -1.69E-46 |
| MS.gene055231 | MS.gene06372 | 0.801126 | 1.04E-48 | -1.69E-46 |
| MS.gene055386 | MS.gene06372 | 0.841572 | 4.38E-58 | -1.69E-46 |
| MS.gene05539 | MS.gene06372 | 0.804037 | 2.62E-49 | -1.69E-46 |
| MS.gene055464 | MS.gene06372 | 0.819809 | 9.55E-53 | -1.69E-46 |
| MS.gene055513 | MS.gene06372 | 0.849557 | 3.00E-60 | -1.69E-46 |
| MS.gene055586 | MS.gene06372 | 0.839457 | 1.57E-57 | -1.69E-46 |
| MS.gene055589 | MS.gene06372 | 0.829691 | 4.47E-55 | -1.69E-46 |
| MS.gene055623 | MS.gene06372 | 0.81336 | 2.66E-51 | -1.69E-46 |
| MS.gene055724 | MS.gene06372 | 0.850463 | 1.67E-60 | -1.69E-46 |
| MS.gene055778 | MS.gene06372 | 0.800875 | 1.17E-48 | -1.69E-46 |
| MS.gene055818 | MS.gene06372 | 0.82638 | 2.80E-54 | -1.69E-46 |
| MS.gene055841 | MS.gene06372 | 0.827655 | 1.39E-54 | -1.69E-46 |
| MS.gene055864 | MS.gene06372 | 0.81783 | 2.69E-52 | -1.69E-46 |
| MS.gene055926 | MS.gene06372 | 0.801794 | 7.61E-49 | -1.69E-46 |
| MS.gene056050 | MS.gene06372 | 0.836257 | 1.04E-56 | -1.69E-46 |
| MS.gene056162 | MS.gene06372 | 0.824188 | 9.24E-54 | -1.69E-46 |
| MS.gene056174 | MS.gene06372 | 0.831721 | 1.42E-55 | -1.69E-46 |
| MS.gene056272 | MS.gene06372 | 0.807006 | 6.24E-50 | -1.69E-46 |
| MS.gene056366 | MS.gene06372 | 0.808532 | 2.96E-50 | -1.69E-46 |
| MS.gene056373 | MS.gene06372 | 0.810958 | 8.90E-51 | -1.69E-46 |
| MS.gene056595 | MS.gene06372 | 0.834441 | 2.99E-56 | -1.69E-46 |
| MS.gene05659 | MS.gene06372 | 0.820763 | 5.78E-53 | -1.69E-46 |
| MS.gene056677 | MS.gene06372 | 0.81889 | 1.55E-52 | -1.69E-46 |
| MS.gene056699 | MS.gene06372 | 0.896381 | 3.90E-76 | -1.69E-46 |
| MS.gene056776 | MS.gene06372 | 0.861116 | 1.29E-63 | -1.69E-46 |
| MS.gene056779 | MS.gene06372 | 0.850869 | 1.28E-60 | -1.69E-46 |
| MS.gene05686 | MS.gene06372 | 0.85411 | 1.53E-61 | -1.69E-46 |
| MS.gene05690 | MS.gene06372 | 0.824678 | 7.09E-54 | -1.69E-46 |
| MS.gene056973 | MS.gene06372 | 0.803469 | 3.43E-49 | -1.69E-46 |
| MS.gene056986 | MS.gene06372 | 0.821951 | 3.07E-53 | -1.69E-46 |
| MS.gene057026 | MS.gene06372 | 0.836874 | 7.25E-57 | -1.69E-46 |
| MS.gene057034 | MS.gene06372 | 0.84091 | 6.54E-58 | -1.69E-46 |
| MS.gene057102 | MS.gene06372 | 0.868601 | 5.78E-66 | -1.69E-46 |
| MS.gene057155 | MS.gene06372 | 0.829437 | 5.15E-55 | -1.69E-46 |
| MS.gene057208 | MS.gene06372 | 0.859506 | 3.95E-63 | -1.69E-46 |
| MS.gene057611 | MS.gene06372 | 0.842769 | 2.11E-58 | -1.69E-46 |
| MS.gene057893 | MS.gene06372 | -0.806379 | 8.47E-50 | -1.69E-46 |
| MS.gene058008 | MS.gene06372 | 0.82451 | 7.76E-54 | -1.69E-46 |
| MS.gene058009 | MS.gene06372 | 0.811207 | 7.86E-51 | -1.69E-46 |
| MS.gene058010 | MS.gene06372 | 0.808744 | 2.66E-50 | -1.69E-46 |
| MS.gene058037 | MS.gene06372 | 0.807937 | 3.96E-50 | -1.69E-46 |
| MS.gene058081 | MS.gene06372 | 0.801065 | 1.07E-48 | -1.69E-46 |
| MS.gene058159 | MS.gene06372 | 0.824621 | 7.31E-54 | -1.69E-46 |
| MS.gene058279 | MS.gene06372 | 0.83282 | 7.60E-56 | -1.69E-46 |
| MS.gene058289 | MS.gene06372 | 0.817097 | 3.94E-52 | -1.69E-46 |
| MS.gene058592 | MS.gene06372 | 0.804438 | 2.16E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene06372 | 0.81917 | 1.34E-52 | -1.69E-46 |
| MS.gene058681 | MS.gene06372 | 0.80414 | 2.49E-49 | -1.69E-46 |
| MS.gene058781 | MS.gene06372 | 0.815515 | 8.89E-52 | -1.69E-46 |
| MS.gene058783 | MS.gene06372 | 0.802472 | 5.52E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene06372 | 0.841004 | 6.18E-58 | -1.69E-46 |
| MS.gene05897 | MS.gene06372 | 0.814284 | 1.67E-51 | -1.69E-46 |
| MS.gene059170 | MS.gene06372 | 0.803595 | 3.23E-49 | -1.69E-46 |
| MS.gene059272 | MS.gene06372 | 0.800029 | 1.75E-48 | -1.69E-46 |
| MS.gene059439 | MS.gene06372 | 0.825489 | 4.56E-54 | -1.69E-46 |
| MS.gene05952 | MS.gene06372 | 0.831989 | 1.22E-55 | -1.69E-46 |
| MS.gene059570 | MS.gene06372 | 0.829112 | 6.18E-55 | -1.69E-46 |
| MS.gene059625 | MS.gene06372 | 0.808781 | 2.62E-50 | -1.69E-46 |
| MS.gene059634 | MS.gene06372 | 0.812197 | 4.78E-51 | -1.69E-46 |
| MS.gene059774 | MS.gene06372 | 0.828787 | 7.40E-55 | -1.69E-46 |
| MS.gene05985 | MS.gene06372 | -0.859851 | 3.11E-63 | -1.69E-46 |
| MS.gene059965 | MS.gene06372 | 0.839665 | 1.38E-57 | -1.69E-46 |
| MS.gene060011 | MS.gene06372 | 0.806155 | 9.44E-50 | -1.69E-46 |
| MS.gene060012 | MS.gene06372 | 0.825094 | 5.65E-54 | -1.69E-46 |
| MS.gene060167 | MS.gene06372 | 0.801299 | 9.61E-49 | -1.69E-46 |
| MS.gene060257 | MS.gene06372 | 0.800603 | 1.33E-48 | -1.69E-46 |
| MS.gene060322 | MS.gene06372 | 0.800761 | 1.24E-48 | -1.69E-46 |
| MS.gene060365 | MS.gene06372 | 0.833504 | 5.14E-56 | -1.69E-46 |
| MS.gene060373 | MS.gene06372 | 0.834496 | 2.90E-56 | -1.69E-46 |
| MS.gene060412 | MS.gene06372 | 0.8065 | 7.98E-50 | -1.69E-46 |
| MS.gene060520 | MS.gene06372 | 0.828903 | 6.94E-55 | -1.69E-46 |
| MS.gene060521 | MS.gene06372 | 0.812834 | 3.47E-51 | -1.69E-46 |
| MS.gene060527 | MS.gene06372 | 0.808023 | 3.80E-50 | -1.69E-46 |
| MS.gene06052 | MS.gene06372 | 0.833056 | 6.64E-56 | -1.69E-46 |
| MS.gene060572 | MS.gene06372 | 0.806286 | 8.86E-50 | -1.69E-46 |
| MS.gene060697 | MS.gene06372 | 0.825501 | 4.53E-54 | -1.69E-46 |
| MS.gene060777 | MS.gene06372 | 0.833954 | 3.96E-56 | -1.69E-46 |
| MS.gene060840 | MS.gene06372 | 0.848683 | 5.24E-60 | -1.69E-46 |
| MS.gene060879 | MS.gene06372 | 0.805117 | 1.56E-49 | -1.69E-46 |
| MS.gene060932 | MS.gene06372 | 0.842661 | 2.26E-58 | -1.69E-46 |
| MS.gene060933 | MS.gene06372 | 0.820323 | 7.29E-53 | -1.69E-46 |
| MS.gene060935 | MS.gene06372 | 0.848864 | 4.67E-60 | -1.69E-46 |
| MS.gene060937 | MS.gene06372 | 0.853149 | 2.89E-61 | -1.69E-46 |
| MS.gene061100 | MS.gene06372 | 0.821249 | 4.46E-53 | -1.69E-46 |
| MS.gene061160 | MS.gene06372 | 0.806475 | 8.08E-50 | -1.69E-46 |
| MS.gene061188 | MS.gene06372 | 0.842712 | 2.19E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene66354 | MS.gene06372 | PPI |
| MS.gene013289 | MS.gene06372 | PPI |
| MS.gene049254 | MS.gene06372 | PPI |
| MS.gene06372 | MS.gene030307 | PPI |
| MS.gene064025 | MS.gene06372 | PPI |
| MS.gene40918 | MS.gene06372 | PPI |
| MS.gene06372 | MS.gene75052 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06372.t1 | MTR_3g096680 | 100.000 | 217 | 0 | 0 | 1 | 217 | 1 | 217 | 4.09e-152 | 421 |
| MS.gene06372.t1 | MTR_3g096680 | 90.417 | 240 | 0 | 1 | 1 | 217 | 1 | 240 | 9.50e-147 | 408 |
| MS.gene06372.t1 | MTR_3g096680 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 4.61e-91 | 264 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06372.t1 | AT5G09260 | 78.539 | 219 | 42 | 3 | 1 | 217 | 1 | 216 | 6.52e-117 | 332 |
| MS.gene06372.t1 | AT5G63880 | 74.091 | 220 | 53 | 2 | 1 | 217 | 1 | 219 | 5.34e-112 | 320 |
| MS.gene06372.t1 | AT5G63880 | 66.803 | 244 | 53 | 3 | 1 | 217 | 1 | 243 | 3.22e-106 | 306 |
Find 38 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAGATGAAGAGGAGATTT+TGG | 0.201044 | 3.1:-77089634 | MS.gene06372:CDS |
| GGCTGTCTTTGAAAGTTTAA+AGG | 0.219717 | 3.1:-77090024 | MS.gene06372:CDS |
| ACTGAGCAAGTTTGCGTCTC+TGG | 0.262924 | 3.1:+77091293 | None:intergenic |
| AATGTTTATCTCACTTTGTA+TGG | 0.301517 | 3.1:+77089980 | None:intergenic |
| TGAAGATGTTCAGAAACTTA+TGG | 0.330454 | 3.1:-77089958 | MS.gene06372:CDS |
| GGAACTGTGCTAGGAGCTTC+AGG | 0.332559 | 3.1:+77088241 | None:intergenic |
| TTTGGCAGAGTTTGAGAACT+TGG | 0.390056 | 3.1:-77089616 | MS.gene06372:CDS |
| GGTGCCTTGGTTGGAACATC+AGG | 0.402386 | 3.1:+77088190 | None:intergenic |
| GAAGAAAGATAGGGCCTTGT+TGG | 0.403435 | 3.1:-77090506 | MS.gene06372:CDS |
| AAGGAAATTAATGCAATACT+TGG | 0.407288 | 3.1:-77089672 | MS.gene06372:CDS |
| CGATCTACGTCCGTTACCTT+AGG | 0.414802 | 3.1:+77091337 | None:intergenic |
| GCATCACTCGTAGTGGTAAC+TGG | 0.415859 | 3.1:+77088169 | None:intergenic |
| AGGAAATTAATGCAATACTT+GGG | 0.470100 | 3.1:-77089671 | MS.gene06372:CDS |
| TTGCTCAACATTTATAAGCC+AGG | 0.478759 | 3.1:+77090435 | None:intergenic |
| CTGAGCAAGTTTGCGTCTCT+GGG | 0.482606 | 3.1:+77091294 | None:intergenic |
| GTCTTTGAAAGTTTAAAGGC+TGG | 0.504167 | 3.1:-77090020 | MS.gene06372:CDS |
| AACAGTTATGGAGGAACCAT+TGG | 0.511723 | 3.1:-77088026 | MS.gene06372:intron |
| CGTAGTGGTAACTGGTGCCT+TGG | 0.515200 | 3.1:+77088177 | None:intergenic |
| TTCGTGAAAAGAAGAAAGAT+AGG | 0.520278 | 3.1:-77090516 | MS.gene06372:CDS |
| TGACAAGGTTGACGAAAAGT+TGG | 0.521454 | 3.1:-77088218 | MS.gene06372:CDS |
| ACTTGCTCAGTATCAACAAA+AGG | 0.527227 | 3.1:-77091281 | MS.gene06372:intron |
| ATTATCAGCAGAAGATGAAG+AGG | 0.529769 | 3.1:-77089643 | MS.gene06372:CDS |
| GTGGTAACTGGTGCCTTGGT+TGG | 0.551235 | 3.1:+77088181 | None:intergenic |
| AATGTTCTTCAAGCTGCCAA+TGG | 0.568542 | 3.1:+77088010 | None:intergenic |
| TATTGAAGCAAGTTGACACC+TGG | 0.572175 | 3.1:-77090453 | MS.gene06372:CDS |
| ACCTTGTCAGGAACTGTGCT+AGG | 0.576734 | 3.1:+77088232 | None:intergenic |
| GGAAATTAATGCAATACTTG+GGG | 0.576994 | 3.1:-77089670 | MS.gene06372:CDS |
| TATATTCGTGAAGAAACCTA+AGG | 0.587486 | 3.1:-77091353 | MS.gene06372:CDS |
| TCGTGAAAAGAAGAAAGATA+GGG | 0.592708 | 3.1:-77090515 | MS.gene06372:CDS |
| TTTCTTCTTTAACGCCAACA+AGG | 0.596260 | 3.1:+77090492 | None:intergenic |
| TGAACTGACAAGCAAGCAGA+AGG | 0.603490 | 3.1:-77090045 | MS.gene06372:CDS |
| TCCTAGCACAGTTCCTGACA+AGG | 0.608316 | 3.1:-77088233 | MS.gene06372:CDS |
| GTTTGAGAACTTGGAAACCC+AGG | 0.622553 | 3.1:-77089607 | MS.gene06372:intron |
| CGTGAAGAAACCTAAGGTAA+CGG | 0.639718 | 3.1:-77091347 | MS.gene06372:CDS |
| TACTTCAGCATCACTCGTAG+TGG | 0.642788 | 3.1:+77088162 | None:intergenic |
| CCTTCCTGATGTTCCAACCA+AGG | 0.677701 | 3.1:-77088194 | MS.gene06372:CDS |
| CCTTGGTTGGAACATCAGGA+AGG | 0.680222 | 3.1:+77088194 | None:intergenic |
| TGATGTTGCAACAGTTATGG+AGG | 0.695628 | 3.1:-77088035 | MS.gene06372:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTTTTATTTTATTTTCTT+TGG | + | chr3.1:77091300-77091319 | None:intergenic | 10.0% |
| !!! | TTATTTTGAAATTTTTCAAT+CGG | + | chr3.1:77090257-77090276 | None:intergenic | 10.0% |
| !! | AAATTAGGAATATGATATAA+AGG | - | chr3.1:77091017-77091036 | MS.gene06372:intron | 15.0% |
| !! | AATAACAGATATGAAATTAA+GGG | + | chr3.1:77088139-77088158 | None:intergenic | 15.0% |
| !! | ATTTATATTCATGTTAAAAG+AGG | + | chr3.1:77089259-77089278 | None:intergenic | 15.0% |
| !! | TCAAGAATAGTAATAAATAT+CGG | - | chr3.1:77088433-77088452 | MS.gene06372:intron | 15.0% |
| !! | TTTATATTCATGTTAAAAGA+GGG | + | chr3.1:77089258-77089277 | None:intergenic | 15.0% |
| !! | TTTCTGATAATTACTTATTA+GGG | - | chr3.1:77088183-77088202 | MS.gene06372:CDS | 15.0% |
| !!! | ACATTTTGTTACTAAATAAA+TGG | + | chr3.1:77088513-77088532 | None:intergenic | 15.0% |
| !!! | CTATTTTTACAATTTTCAAT+CGG | + | chr3.1:77090201-77090220 | None:intergenic | 15.0% |
| !!! | TAATATAGTGTTTTAGATTT+TGG | - | chr3.1:77088713-77088732 | MS.gene06372:intron | 15.0% |
| !!! | TTTTCTGATAATTACTTATT+AGG | - | chr3.1:77088182-77088201 | MS.gene06372:CDS | 15.0% |
| !! | AAACATTGAATTCAATTGTT+TGG | - | chr3.1:77090934-77090953 | MS.gene06372:intron | 20.0% |
| !! | AACCTTTAGATTAAAATAGA+TGG | - | chr3.1:77089941-77089960 | MS.gene06372:CDS | 20.0% |
| !! | ATGGACTTATATGTATAAAT+AGG | - | chr3.1:77088319-77088338 | MS.gene06372:intron | 20.0% |
| !! | GAATAACAGATATGAAATTA+AGG | + | chr3.1:77088140-77088159 | None:intergenic | 20.0% |
| !! | GAGGTTATAAATTCAAAATT+AGG | - | chr3.1:77091002-77091021 | MS.gene06372:intron | 20.0% |
| !! | TAAAATCAATTCAACACTAA+CGG | - | chr3.1:77090285-77090304 | MS.gene06372:intron | 20.0% |
| !! | TAACAATGAAAATAAAGATC+TGG | + | chr3.1:77090093-77090112 | None:intergenic | 20.0% |
| !! | TAACATTAAAACAAGATGAA+GGG | - | chr3.1:77090170-77090189 | MS.gene06372:intron | 20.0% |
| !! | TTCAAATTTGTGATTTCAAT+CGG | + | chr3.1:77090315-77090334 | None:intergenic | 20.0% |
| !! | TTTAATCATAGTATATGGAA+AGG | - | chr3.1:77089872-77089891 | MS.gene06372:intron | 20.0% |
| !!! | AAAAGTCTACTTATTTGTTT+TGG | - | chr3.1:77089014-77089033 | MS.gene06372:intron | 20.0% |
| !!! | GAAGTATCTATAAAAAGAAA+AGG | - | chr3.1:77091234-77091253 | MS.gene06372:intron | 20.0% |
| !!! | GATACTTACATTTATTTTGT+TGG | - | chr3.1:77089295-77089314 | MS.gene06372:intron | 20.0% |
| !!! | TAAATGTAAGTATCTCTTTT+AGG | + | chr3.1:77089289-77089308 | None:intergenic | 20.0% |
| ! | AACATTAAAACAAGATGAAG+GGG | - | chr3.1:77090171-77090190 | MS.gene06372:intron | 25.0% |
| ! | AAGGAAATTAATGCAATACT+TGG | - | chr3.1:77089707-77089726 | MS.gene06372:intron | 25.0% |
| ! | AATGTTTATCTCACTTTGTA+TGG | + | chr3.1:77089402-77089421 | None:intergenic | 25.0% |
| ! | ACCATCAGATCAAAAATAAA+CGG | + | chr3.1:77090584-77090603 | None:intergenic | 25.0% |
| ! | AGGAAATTAATGCAATACTT+GGG | - | chr3.1:77089708-77089727 | MS.gene06372:intron | 25.0% |
| ! | ATCATAAAAAGACGTTGTTT+AGG | - | chr3.1:77090407-77090426 | MS.gene06372:intron | 25.0% |
| ! | ATGACATCTAGCATAAAAAA+TGG | - | chr3.1:77090858-77090877 | MS.gene06372:intron | 25.0% |
| ! | ATTGAATTCAATGTTTCGAT+TGG | + | chr3.1:77090930-77090949 | None:intergenic | 25.0% |
| ! | ATTGTAAAAATAGTGCAACT+AGG | - | chr3.1:77090208-77090227 | MS.gene06372:intron | 25.0% |
| ! | GTAACATTAAAACAAGATGA+AGG | - | chr3.1:77090169-77090188 | MS.gene06372:intron | 25.0% |
| ! | TGAACAATTGAACTAAAGTT+TGG | - | chr3.1:77088217-77088236 | MS.gene06372:CDS | 25.0% |
| ! | TTATGATTGAGATGTGAATT+GGG | + | chr3.1:77090394-77090413 | None:intergenic | 25.0% |
| ! | TTTATGATTGAGATGTGAAT+TGG | + | chr3.1:77090395-77090414 | None:intergenic | 25.0% |
| !! | AATTTTATTGGGAGTGAAAA+AGG | + | chr3.1:77090002-77090021 | None:intergenic | 25.0% |
| !! | ATTGAGATTTTTGTTCTGTT+GGG | - | chr3.1:77089603-77089622 | MS.gene06372:intron | 25.0% |
| !! | ATTTGAAATTCATTCGAAAC+AGG | - | chr3.1:77090328-77090347 | MS.gene06372:intron | 25.0% |
| !! | TATGAATGGATTTATAAGTC+AGG | + | chr3.1:77089829-77089848 | None:intergenic | 25.0% |
| !!! | AGCCATCTATTTTAATCTAA+AGG | + | chr3.1:77089946-77089965 | None:intergenic | 25.0% |
| !!! | CACTTTTTTGGTTATTAACT+GGG | - | chr3.1:77088689-77088708 | MS.gene06372:intron | 25.0% |
| !!! | CATGATTTTGCTTAATTTGA+AGG | - | chr3.1:77089688-77089707 | MS.gene06372:intron | 25.0% |
| !!! | GAAATTAAGGGTATTGAAAA+AGG | + | chr3.1:77088127-77088146 | None:intergenic | 25.0% |
| !!! | TCTACTTATTTGTTTTGGTT+TGG | - | chr3.1:77089019-77089038 | MS.gene06372:intron | 25.0% |
| AAAGATCTGGTCATTAACAT+TGG | + | chr3.1:77090080-77090099 | None:intergenic | 30.0% | |
| AACAACAGTAATCAATACAG+TGG | + | chr3.1:77088346-77088365 | None:intergenic | 30.0% | |
| AAGTTCAATGAATCTAGATG+TGG | + | chr3.1:77089532-77089551 | None:intergenic | 30.0% | |
| AGAGAGTGAGTCATTATTAT+TGG | + | chr3.1:77089046-77089065 | None:intergenic | 30.0% | |
| CATGCAATAAGAATTTATGG+GGG | + | chr3.1:77091068-77091087 | None:intergenic | 30.0% | |
| CCATGCAATAAGAATTTATG+GGG | + | chr3.1:77091069-77091088 | None:intergenic | 30.0% | |
| CTAAATTTCCTCTATGCTAT+AGG | + | chr3.1:77088465-77088484 | None:intergenic | 30.0% | |
| GAAAGGAAAAAACTCAAGTA+AGG | + | chr3.1:77088778-77088797 | None:intergenic | 30.0% | |
| GCCATGCAATAAGAATTTAT+GGG | + | chr3.1:77091070-77091089 | None:intergenic | 30.0% | |
| GGAAAATAAAGAACACAGAA+AGG | + | chr3.1:77088795-77088814 | None:intergenic | 30.0% | |
| GGAAATTAATGCAATACTTG+GGG | - | chr3.1:77089709-77089728 | MS.gene06372:intron | 30.0% | |
| TACCTGTTTGTATCTTTCTA+TGG | - | chr3.1:77089065-77089084 | MS.gene06372:intron | 30.0% | |
| TATAGAAGTTGACTAACTGA+TGG | - | chr3.1:77091320-77091339 | MS.gene06372:CDS | 30.0% | |
| TATATTCGTGAAGAAACCTA+AGG | - | chr3.1:77088026-77088045 | MS.gene06372:intron | 30.0% | |
| TATGATTGAGATGTGAATTG+GGG | + | chr3.1:77090393-77090412 | None:intergenic | 30.0% | |
| TCGTGAAAAGAAGAAAGATA+GGG | - | chr3.1:77088864-77088883 | MS.gene06372:intron | 30.0% | |
| TGAAGATGTTCAGAAACTTA+TGG | - | chr3.1:77089421-77089440 | MS.gene06372:intron | 30.0% | |
| TGCCATGCAATAAGAATTTA+TGG | + | chr3.1:77091071-77091090 | None:intergenic | 30.0% | |
| TGTTGGGCTGTTAATATATT+TGG | - | chr3.1:77089619-77089638 | MS.gene06372:CDS | 30.0% | |
| TTCGTGAAAAGAAGAAAGAT+AGG | - | chr3.1:77088863-77088882 | MS.gene06372:intron | 30.0% | |
| ! | AATGGAGGTTCTTTATTTGT+GGG | - | chr3.1:77090780-77090799 | MS.gene06372:intron | 30.0% |
| ! | CACTACTTCTCATTTTCATA+TGG | - | chr3.1:77088300-77088319 | MS.gene06372:intron | 30.0% |
| ! | GATTGAGATTTTTGTTCTGT+TGG | - | chr3.1:77089602-77089621 | MS.gene06372:intron | 30.0% |
| ! | TAATGGAGGTTCTTTATTTG+TGG | - | chr3.1:77090779-77090798 | MS.gene06372:intron | 30.0% |
| !! | AGAAGGCGTGAAAATTTTAT+TGG | + | chr3.1:77090014-77090033 | None:intergenic | 30.0% |
| !! | CTGGCTTTAATCATAGTATA+TGG | - | chr3.1:77089867-77089886 | MS.gene06372:intron | 30.0% |
| !! | GAAGGCGTGAAAATTTTATT+GGG | + | chr3.1:77090013-77090032 | None:intergenic | 30.0% |
| !! | TTTATTTTCTTTGGGAGAGA+GGG | + | chr3.1:77091291-77091310 | None:intergenic | 30.0% |
| !!! | GCACTTTTTTGGTTATTAAC+TGG | - | chr3.1:77088688-77088707 | MS.gene06372:intron | 30.0% |
| !!! | TTTTATTTTCTTTGGGAGAG+AGG | + | chr3.1:77091292-77091311 | None:intergenic | 30.0% |
| AAAGCTGCAGAAAATCTGAA+TGG | - | chr3.1:77090498-77090517 | MS.gene06372:CDS | 35.0% | |
| AACATTGCTTAGAGAAGAGA+TGG | + | chr3.1:77090961-77090980 | None:intergenic | 35.0% | |
| AACTGAAAAATCCATGTACC+TGG | + | chr3.1:77089793-77089812 | None:intergenic | 35.0% | |
| AAGCTGCAGAAAATCTGAAT+GGG | - | chr3.1:77090499-77090518 | MS.gene06372:CDS | 35.0% | |
| ACACCAGATACAATCAAAGA+CGG | + | chr3.1:77088633-77088652 | None:intergenic | 35.0% | |
| ACAGCTGGAACAAATATGAA+TGG | + | chr3.1:77089843-77089862 | None:intergenic | 35.0% | |
| ACATTGCTTAGAGAAGAGAT+GGG | + | chr3.1:77090960-77090979 | None:intergenic | 35.0% | |
| ACTCATACCACAAGTAACTT+GGG | + | chr3.1:77090838-77090857 | None:intergenic | 35.0% | |
| ACTGAAAAATCCATGTACCT+GGG | + | chr3.1:77089792-77089811 | None:intergenic | 35.0% | |
| ACTTGCTCAGTATCAACAAA+AGG | - | chr3.1:77088098-77088117 | MS.gene06372:intron | 35.0% | |
| AGCCATAGAAAGATACAAAC+AGG | + | chr3.1:77089070-77089089 | None:intergenic | 35.0% | |
| ATCTCTTCTGAACAGGATAT+CGG | + | chr3.1:77089217-77089236 | None:intergenic | 35.0% | |
| ATTATCAGCAGAAGATGAAG+AGG | - | chr3.1:77089736-77089755 | MS.gene06372:intron | 35.0% | |
| CAATAAGAATTTATGGGGGA+AGG | + | chr3.1:77091064-77091083 | None:intergenic | 35.0% | |
| CCCCATAAATTCTTATTGCA+TGG | - | chr3.1:77091066-77091085 | MS.gene06372:intron | 35.0% | |
| CTCAATTATCTCTTCTGAAC+AGG | + | chr3.1:77089224-77089243 | None:intergenic | 35.0% | |
| CTTTGATTGTATCTGGTGTA+TGG | - | chr3.1:77088634-77088653 | MS.gene06372:intron | 35.0% | |
| TACCTGTTAGCATCTTTCTA+TGG | - | chr3.1:77089145-77089164 | MS.gene06372:intron | 35.0% | |
| TACTCATACCACAAGTAACT+TGG | + | chr3.1:77090839-77090858 | None:intergenic | 35.0% | |
| TATCAGCCGAGACTAATTAA+TGG | - | chr3.1:77090762-77090781 | MS.gene06372:intron | 35.0% | |
| TGCTAACAGGTAGAGATTAT+CGG | + | chr3.1:77089137-77089156 | None:intergenic | 35.0% | |
| TGTATGGAAAATGAATCAGC+TGG | - | chr3.1:77088650-77088669 | MS.gene06372:intron | 35.0% | |
| TTGCTCAACATTTATAAGCC+AGG | + | chr3.1:77088947-77088966 | None:intergenic | 35.0% | |
| TTTCTTCTTTAACGCCAACA+AGG | + | chr3.1:77088890-77088909 | None:intergenic | 35.0% | |
| ! | AACTTGAGTGTACCTTTTTG+GGG | - | chr3.1:77089547-77089566 | MS.gene06372:intron | 35.0% |
| ! | AATTCTCATCTACTTGCTGA+TGG | - | chr3.1:77089661-77089680 | MS.gene06372:CDS | 35.0% |
| ! | AGAAGATGAAGAGGAGATTT+TGG | - | chr3.1:77089745-77089764 | MS.gene06372:intron | 35.0% |
| ! | GAACCTCCATTAATTAGTCT+CGG | + | chr3.1:77090771-77090790 | None:intergenic | 35.0% |
| ! | GAACTTGAGTGTACCTTTTT+GGG | - | chr3.1:77089546-77089565 | MS.gene06372:intron | 35.0% |
| ! | GGCTGTCTTTGAAAGTTTAA+AGG | - | chr3.1:77089355-77089374 | MS.gene06372:intron | 35.0% |
| ! | GTCTTTGAAAGTTTAAAGGC+TGG | - | chr3.1:77089359-77089378 | MS.gene06372:intron | 35.0% |
| ! | TAGCTCAGTGTTGTTAATCT+CGG | + | chr3.1:77088602-77088621 | None:intergenic | 35.0% |
| ! | TGAACTTGAGTGTACCTTTT+TGG | - | chr3.1:77089545-77089564 | MS.gene06372:intron | 35.0% |
| ! | TTGATAAGCTTTTGCTTCAG+CGG | + | chr3.1:77089453-77089472 | None:intergenic | 35.0% |
| !!! | GCCGTTTATTTTTGATCTGA+TGG | - | chr3.1:77090580-77090599 | MS.gene06372:intron | 35.0% |
| !!! | TGGTGATGATTGCACTTTTT+TGG | - | chr3.1:77088677-77088696 | MS.gene06372:intron | 35.0% |
| AAAATGAATCAGCTGGACGT+TGG | - | chr3.1:77088657-77088676 | MS.gene06372:intron | 40.0% | |
| AACAGTTATGGAGGAACCAT+TGG | - | chr3.1:77091353-77091372 | MS.gene06372:CDS | 40.0% | |
| ACAGGTAGAGATTATCGGAA+AGG | + | chr3.1:77089132-77089151 | None:intergenic | 40.0% | |
| ACTCAATGGCTCAATAGACA+AGG | + | chr3.1:77089183-77089202 | None:intergenic | 40.0% | |
| AGACCGTCTTTGATTGTATC+TGG | - | chr3.1:77088627-77088646 | MS.gene06372:intron | 40.0% | |
| AGCCATAGAAAGATGCTAAC+AGG | + | chr3.1:77089150-77089169 | None:intergenic | 40.0% | |
| ATAGACTAAGTGAGGCACAT+GGG | - | chr3.1:77090530-77090549 | MS.gene06372:CDS | 40.0% | |
| ATTAAAGCCAGTAGTACAGC+TGG | + | chr3.1:77089858-77089877 | None:intergenic | 40.0% | |
| ATTTGTTCCAGCTGTACTAC+TGG | - | chr3.1:77089848-77089867 | MS.gene06372:intron | 40.0% | |
| CAGGTAGAGATTATCGGAAA+GGG | + | chr3.1:77089131-77089150 | None:intergenic | 40.0% | |
| CGGAAAGGGAAAATACTCAA+TGG | + | chr3.1:77089197-77089216 | None:intergenic | 40.0% | |
| CGTGAAGAAACCTAAGGTAA+CGG | - | chr3.1:77088032-77088051 | MS.gene06372:intron | 40.0% | |
| CTTCAATAACAGCATCAAGC+TGG | + | chr3.1:77088816-77088835 | None:intergenic | 40.0% | |
| GAAAATCTGAATGGGTATGG+TGG | - | chr3.1:77090507-77090526 | MS.gene06372:CDS | 40.0% | |
| GAGCTAGTGATTGACTATAG+AGG | - | chr3.1:77090983-77091002 | MS.gene06372:intron | 40.0% | |
| GATCTGGTCATTAACATTGG+TGG | + | chr3.1:77090077-77090096 | None:intergenic | 40.0% | |
| GCAGAAAATCTGAATGGGTA+TGG | - | chr3.1:77090504-77090523 | MS.gene06372:CDS | 40.0% | |
| GGCATATCGTAGAACAATAG+AGG | + | chr3.1:77088492-77088511 | None:intergenic | 40.0% | |
| TACCACAAGTAACTTGGGTT+CGG | + | chr3.1:77090833-77090852 | None:intergenic | 40.0% | |
| TCTATGCTACAGTGCTATAG+CGG | + | chr3.1:77088547-77088566 | None:intergenic | 40.0% | |
| TCTGAACAGGATATCGGAAA+GGG | + | chr3.1:77089211-77089230 | None:intergenic | 40.0% | |
| TGACAAGGTTGACGAAAAGT+TGG | - | chr3.1:77091161-77091180 | MS.gene06372:intron | 40.0% | |
| TGATGTTGCAACAGTTATGG+AGG | - | chr3.1:77091344-77091363 | MS.gene06372:CDS | 40.0% | |
| TTCTGAACAGGATATCGGAA+AGG | + | chr3.1:77089212-77089231 | None:intergenic | 40.0% | |
| TTTCAGAAGCAGCAAGAGTA+AGG | + | chr3.1:77089501-77089520 | None:intergenic | 40.0% | |
| TTTGACGTGCACAATGAGAA+TGG | + | chr3.1:77088162-77088181 | None:intergenic | 40.0% | |
| TTTGGCAGAGTTTGAGAACT+TGG | - | chr3.1:77089763-77089782 | MS.gene06372:intron | 40.0% | |
| ! | AACTTTTCGTCAACCTTGTC+AGG | + | chr3.1:77091162-77091181 | None:intergenic | 40.0% |
| ! | ACTTGAGTGTACCTTTTTGG+GGG | - | chr3.1:77089548-77089567 | MS.gene06372:intron | 40.0% |
| ! | TATTGAAGCAAGTTGACACC+TGG | - | chr3.1:77088926-77088945 | MS.gene06372:intron | 40.0% |
| !! | GTTAGGCATTGAAGTTGTAC+TGG | - | chr3.1:77089576-77089595 | MS.gene06372:intron | 40.0% |
| !! | TATGGTGGATAGACTAAGTG+AGG | - | chr3.1:77090522-77090541 | MS.gene06372:CDS | 40.0% |
| AACTTGGAAACCCAGGTACA+TGG | - | chr3.1:77089779-77089798 | MS.gene06372:intron | 45.0% | |
| ATAGAGAGAGAGAGAGAGAG+AGG | + | chr3.1:77090697-77090678 | None:intergenic | 45.0% | |
| CAGCCGAGACTAATTAATGG+AGG | - | chr3.1:77090765-77090784 | MS.gene06372:intron | 45.0% | |
| CTGGTCATTAACATTGGTGG+TGG | + | chr3.1:77090074-77090093 | None:intergenic | 45.0% | |
| GATAGACTAAGTGAGGCACA+TGG | - | chr3.1:77090529-77090548 | MS.gene06372:CDS | 45.0% | |
| GATCTTCGACTGCAAACTGT+TGG | + | chr3.1:77091116-77091135 | None:intergenic | 45.0% | |
| GCTATAGCACTGTAGCATAG+AGG | - | chr3.1:77088546-77088565 | MS.gene06372:intron | 45.0% | |
| GGCTATAGCCTATAGCATAG+AGG | - | chr3.1:77088454-77088473 | MS.gene06372:intron | 45.0% | |
| GGCTGATGTTGCAACAGTTA+TGG | - | chr3.1:77091341-77091360 | MS.gene06372:CDS | 45.0% | |
| GTTTGAGAACTTGGAAACCC+AGG | - | chr3.1:77089772-77089791 | MS.gene06372:intron | 45.0% | |
| TACTTCAGCATCACTCGTAG+TGG | + | chr3.1:77091220-77091239 | None:intergenic | 45.0% | |
| TGAAAATGGGGGAGTGGAAT+TGG | + | chr3.1:77090047-77090066 | None:intergenic | 45.0% | |
| TGAACTGACAAGCAAGCAGA+AGG | - | chr3.1:77089334-77089353 | MS.gene06372:intron | 45.0% | |
| ! | GAAGAAAGATAGGGCCTTGT+TGG | - | chr3.1:77088873-77088892 | MS.gene06372:intron | 45.0% |
| ! | GTGTCATTCCTCTAGCAACA+AGG | + | chr3.1:77090738-77090757 | None:intergenic | 45.0% |
| !! | CGGAAAGGGAAAGTACTCAA+TGG | + | chr3.1:77089117-77089136 | None:intergenic | 45.0% |
| !! | GTCATTAACATTGGTGGTGG+TGG | + | chr3.1:77090071-77090090 | None:intergenic | 45.0% |
| !! | TGGTGGTGGTGGTTGAAAAT+GGG | + | chr3.1:77090060-77090079 | None:intergenic | 45.0% |
| !! | TTGGTGGTGGTGGTTGAAAA+TGG | + | chr3.1:77090061-77090080 | None:intergenic | 45.0% |
| !! | TTTTCTTTGGGAGAGAGGGA+CGG | + | chr3.1:77091287-77091306 | None:intergenic | 45.0% |
| !!! | TTTTTTATTTTATTTTCTTT+GGG | + | chr3.1:77091299-77091318 | None:intergenic | 5.0% |
| AAATGGGGGAGTGGAATTGG+AGG | + | chr3.1:77090044-77090063 | None:intergenic | 50.0% | |
| ACCTTGTCAGGAACTGTGCT+AGG | + | chr3.1:77091150-77091169 | None:intergenic | 50.0% | |
| ACTGAGCAAGTTTGCGTCTC+TGG | + | chr3.1:77088089-77088108 | None:intergenic | 50.0% | |
| AGCTGCATAATGTGACTGCC+TGG | - | chr3.1:77090893-77090912 | MS.gene06372:intron | 50.0% | |
| CACCGAACCCAAGTTACTTG+TGG | - | chr3.1:77090828-77090847 | MS.gene06372:intron | 50.0% | |
| CCTTCCTGATGTTCCAACCA+AGG | - | chr3.1:77091185-77091204 | MS.gene06372:intron | 50.0% | |
| CCTTGGTTGGAACATCAGGA+AGG | + | chr3.1:77091188-77091207 | None:intergenic | 50.0% | |
| CGATCTACGTCCGTTACCTT+AGG | + | chr3.1:77088045-77088064 | None:intergenic | 50.0% | |
| CGATTGGCAGCATAACTACC+AGG | + | chr3.1:77090914-77090933 | None:intergenic | 50.0% | |
| CTGAGCAAGTTTGCGTCTCT+GGG | + | chr3.1:77088088-77088107 | None:intergenic | 50.0% | |
| GAATTGGAGGCTGGAGAAGA+AGG | + | chr3.1:77090031-77090050 | None:intergenic | 50.0% | |
| GAGAGACACCTTGTTGCTAG+AGG | - | chr3.1:77090727-77090746 | MS.gene06372:intron | 50.0% | |
| GCATCACTCGTAGTGGTAAC+TGG | + | chr3.1:77091213-77091232 | None:intergenic | 50.0% | |
| TCCTAGCACAGTTCCTGACA+AGG | - | chr3.1:77091146-77091165 | MS.gene06372:intron | 50.0% | |
| ! | TTTCTTTGGGAGAGAGGGAC+GGG | + | chr3.1:77091286-77091305 | None:intergenic | 50.0% |
| !! | AGTGTACCTTTTTGGGGGAC+GGG | - | chr3.1:77089553-77089572 | MS.gene06372:intron | 50.0% |
| !! | GAGTGTACCTTTTTGGGGGA+CGG | - | chr3.1:77089552-77089571 | MS.gene06372:intron | 50.0% |
| !! | GGTGGTGGTGGTTGAAAATG+GGG | + | chr3.1:77090059-77090078 | None:intergenic | 50.0% |
| !! | GTGGTGGTGGTTGAAAATGG+GGG | + | chr3.1:77090058-77090077 | None:intergenic | 50.0% |
| CGTAGTGGTAACTGGTGCCT+TGG | + | chr3.1:77091205-77091224 | None:intergenic | 55.0% | |
| GGAACTGTGCTAGGAGCTTC+AGG | + | chr3.1:77091141-77091160 | None:intergenic | 55.0% | |
| GGTGCCTTGGTTGGAACATC+AGG | + | chr3.1:77091192-77091211 | None:intergenic | 55.0% | |
| GGTGGTTGAAAATGGGGGAG+TGG | + | chr3.1:77090053-77090072 | None:intergenic | 55.0% | |
| GTGGTAACTGGTGCCTTGGT+TGG | + | chr3.1:77091201-77091220 | None:intergenic | 55.0% | |
| TGCTACAGTGCTATAGCGGC+TGG | + | chr3.1:77088543-77088562 | None:intergenic | 55.0% | |
| ! | TTCTTTGGGAGAGAGGGACG+GGG | + | chr3.1:77091285-77091304 | None:intergenic | 55.0% |
| !! | GTGTACCTTTTTGGGGGACG+GGG | - | chr3.1:77089554-77089573 | MS.gene06372:intron | 55.0% |
| CCTAACCCCGTCCCCCAAAA+AGG | + | chr3.1:77089562-77089581 | None:intergenic | 60.0% | |
| ! | TCTTTGGGAGAGAGGGACGG+GGG | + | chr3.1:77091284-77091303 | None:intergenic | 60.0% |
| !! | CCTTTTTGGGGGACGGGGTT+AGG | - | chr3.1:77089559-77089578 | MS.gene06372:intron | 60.0% |
| GGGGGAGTGGAATTGGAGGC+TGG | + | chr3.1:77090040-77090059 | None:intergenic | 65.0% | |
| ! | GGGGTGGGTTCAGAGGGATG+AGG | + | chr3.1:77091265-77091284 | None:intergenic | 65.0% |
| TGGGAGAGAGGGACGGGGGT+GGG | + | chr3.1:77091280-77091299 | None:intergenic | 70.0% | |
| TTGGGAGAGAGGGACGGGGG+TGG | + | chr3.1:77091281-77091300 | None:intergenic | 70.0% | |
| ! | AGGGACGGGGGTGGGTTCAG+AGG | + | chr3.1:77091272-77091291 | None:intergenic | 70.0% |
| ! | GGGACGGGGGTGGGTTCAGA+GGG | + | chr3.1:77091271-77091290 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 77088018 | 77091383 | 77088018 | ID=MS.gene06372 |
| chr3.1 | mRNA | 77088018 | 77091383 | 77088018 | ID=MS.gene06372.t1;Parent=MS.gene06372 |
| chr3.1 | exon | 77091282 | 77091383 | 77091282 | ID=MS.gene06372.t1.exon1;Parent=MS.gene06372.t1 |
| chr3.1 | CDS | 77091282 | 77091383 | 77091282 | ID=cds.MS.gene06372.t1;Parent=MS.gene06372.t1 |
| chr3.1 | exon | 77090432 | 77090584 | 77090432 | ID=MS.gene06372.t1.exon2;Parent=MS.gene06372.t1 |
| chr3.1 | CDS | 77090432 | 77090584 | 77090432 | ID=cds.MS.gene06372.t1;Parent=MS.gene06372.t1 |
| chr3.1 | exon | 77089926 | 77090078 | 77089926 | ID=MS.gene06372.t1.exon3;Parent=MS.gene06372.t1 |
| chr3.1 | CDS | 77089926 | 77090078 | 77089926 | ID=cds.MS.gene06372.t1;Parent=MS.gene06372.t1 |
| chr3.1 | exon | 77089608 | 77089691 | 77089608 | ID=MS.gene06372.t1.exon4;Parent=MS.gene06372.t1 |
| chr3.1 | CDS | 77089608 | 77089691 | 77089608 | ID=cds.MS.gene06372.t1;Parent=MS.gene06372.t1 |
| chr3.1 | exon | 77088146 | 77088281 | 77088146 | ID=MS.gene06372.t1.exon5;Parent=MS.gene06372.t1 |
| chr3.1 | CDS | 77088146 | 77088281 | 77088146 | ID=cds.MS.gene06372.t1;Parent=MS.gene06372.t1 |
| chr3.1 | exon | 77088018 | 77088043 | 77088018 | ID=MS.gene06372.t1.exon6;Parent=MS.gene06372.t1 |
| chr3.1 | CDS | 77088018 | 77088043 | 77088018 | ID=cds.MS.gene06372.t1;Parent=MS.gene06372.t1 |
| Gene Sequence |
| Protein sequence |
