Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70656.t1 | KEH35030.1 | 99.6 | 264 | 1 | 0 | 1 | 264 | 1 | 264 | 5.90E-119 | 437.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70656.t1 | Q9ZSZ8 | 69.5 | 259 | 66 | 3 | 10 | 264 | 7 | 256 | 8.4e-66 | 252.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70656.t1 | A0A072VA17 | 99.6 | 264 | 1 | 0 | 1 | 264 | 1 | 264 | 4.2e-119 | 437.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene70656 | 0.833878 | 4.14E-56 | -1.69E-46 |
| MS.gene04918 | MS.gene70656 | 0.868912 | 4.59E-66 | -1.69E-46 |
| MS.gene04919 | MS.gene70656 | 0.842246 | 2.91E-58 | -1.69E-46 |
| MS.gene04920 | MS.gene70656 | 0.868195 | 7.82E-66 | -1.69E-46 |
| MS.gene049254 | MS.gene70656 | 0.868712 | 5.33E-66 | -1.69E-46 |
| MS.gene049283 | MS.gene70656 | 0.840079 | 1.08E-57 | -1.69E-46 |
| MS.gene049343 | MS.gene70656 | 0.828666 | 7.92E-55 | -1.69E-46 |
| MS.gene049350 | MS.gene70656 | 0.829895 | 3.98E-55 | -1.69E-46 |
| MS.gene049368 | MS.gene70656 | 0.835999 | 1.21E-56 | -1.69E-46 |
| MS.gene049441 | MS.gene70656 | 0.81849 | 1.91E-52 | -1.69E-46 |
| MS.gene049499 | MS.gene70656 | 0.84643 | 2.18E-59 | -1.69E-46 |
| MS.gene049666 | MS.gene70656 | 0.82328 | 1.51E-53 | -1.69E-46 |
| MS.gene049711 | MS.gene70656 | 0.835778 | 1.38E-56 | -1.69E-46 |
| MS.gene049807 | MS.gene70656 | 0.814537 | 1.46E-51 | -1.69E-46 |
| MS.gene049821 | MS.gene70656 | 0.816856 | 4.46E-52 | -1.69E-46 |
| MS.gene049824 | MS.gene70656 | 0.827704 | 1.35E-54 | -1.69E-46 |
| MS.gene049825 | MS.gene70656 | 0.842958 | 1.88E-58 | -1.69E-46 |
| MS.gene049850 | MS.gene70656 | 0.807143 | 5.84E-50 | -1.69E-46 |
| MS.gene049873 | MS.gene70656 | 0.832682 | 8.22E-56 | -1.69E-46 |
| MS.gene049983 | MS.gene70656 | 0.836295 | 1.02E-56 | -1.69E-46 |
| MS.gene050026 | MS.gene70656 | 0.804081 | 2.56E-49 | -1.69E-46 |
| MS.gene050355 | MS.gene70656 | 0.828345 | 9.47E-55 | -1.69E-46 |
| MS.gene050559 | MS.gene70656 | 0.845753 | 3.34E-59 | -1.69E-46 |
| MS.gene050561 | MS.gene70656 | 0.838107 | 3.50E-57 | -1.69E-46 |
| MS.gene050562 | MS.gene70656 | 0.834108 | 3.63E-56 | -1.69E-46 |
| MS.gene050799 | MS.gene70656 | 0.806157 | 9.43E-50 | -1.69E-46 |
| MS.gene050828 | MS.gene70656 | 0.827495 | 1.52E-54 | -1.69E-46 |
| MS.gene050901 | MS.gene70656 | 0.806632 | 7.49E-50 | -1.69E-46 |
| MS.gene050945 | MS.gene70656 | 0.830492 | 2.85E-55 | -1.69E-46 |
| MS.gene051019 | MS.gene70656 | 0.824811 | 6.59E-54 | -1.69E-46 |
| MS.gene051181 | MS.gene70656 | 0.804658 | 1.94E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene70656 | 0.819993 | 8.68E-53 | -1.69E-46 |
| MS.gene051279 | MS.gene70656 | 0.830433 | 2.94E-55 | -1.69E-46 |
| MS.gene051332 | MS.gene70656 | 0.838273 | 3.17E-57 | -1.69E-46 |
| MS.gene051343 | MS.gene70656 | 0.814375 | 1.59E-51 | -1.69E-46 |
| MS.gene051363 | MS.gene70656 | 0.802736 | 4.87E-49 | -1.69E-46 |
| MS.gene051676 | MS.gene70656 | 0.807341 | 5.30E-50 | -1.69E-46 |
| MS.gene051699 | MS.gene70656 | 0.834502 | 2.89E-56 | -1.69E-46 |
| MS.gene051700 | MS.gene70656 | 0.83821 | 3.29E-57 | -1.69E-46 |
| MS.gene051719 | MS.gene70656 | 0.807132 | 5.87E-50 | -1.69E-46 |
| MS.gene051720 | MS.gene70656 | 0.817926 | 2.56E-52 | -1.69E-46 |
| MS.gene051744 | MS.gene70656 | 0.863155 | 3.05E-64 | -1.69E-46 |
| MS.gene051791 | MS.gene70656 | 0.821526 | 3.85E-53 | -1.69E-46 |
| MS.gene051832 | MS.gene70656 | 0.830822 | 2.36E-55 | -1.69E-46 |
| MS.gene05188 | MS.gene70656 | 0.818148 | 2.28E-52 | -1.69E-46 |
| MS.gene051957 | MS.gene70656 | 0.803933 | 2.75E-49 | -1.69E-46 |
| MS.gene051975 | MS.gene70656 | 0.850601 | 1.53E-60 | -1.69E-46 |
| MS.gene052016 | MS.gene70656 | 0.806066 | 9.85E-50 | -1.69E-46 |
| MS.gene052108 | MS.gene70656 | 0.804542 | 2.05E-49 | -1.69E-46 |
| MS.gene052118 | MS.gene70656 | 0.805715 | 1.17E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene70656 | 0.804633 | 1.97E-49 | -1.69E-46 |
| MS.gene052463 | MS.gene70656 | 0.830098 | 3.55E-55 | -1.69E-46 |
| MS.gene052518 | MS.gene70656 | 0.816825 | 4.53E-52 | -1.69E-46 |
| MS.gene052519 | MS.gene70656 | 0.854816 | 9.57E-62 | -1.69E-46 |
| MS.gene052533 | MS.gene70656 | 0.839334 | 1.69E-57 | -1.69E-46 |
| MS.gene052534 | MS.gene70656 | 0.822222 | 2.66E-53 | -1.69E-46 |
| MS.gene052582 | MS.gene70656 | 0.869338 | 3.34E-66 | -1.69E-46 |
| MS.gene052584 | MS.gene70656 | 0.878028 | 3.91E-69 | -1.69E-46 |
| MS.gene052685 | MS.gene70656 | 0.836248 | 1.05E-56 | -1.69E-46 |
| MS.gene052717 | MS.gene70656 | 0.83102 | 2.12E-55 | -1.69E-46 |
| MS.gene052773 | MS.gene70656 | 0.83832 | 3.08E-57 | -1.69E-46 |
| MS.gene052793 | MS.gene70656 | 0.814756 | 1.31E-51 | -1.69E-46 |
| MS.gene052855 | MS.gene70656 | 0.805443 | 1.33E-49 | -1.69E-46 |
| MS.gene052888 | MS.gene70656 | 0.803014 | 4.27E-49 | -1.69E-46 |
| MS.gene052889 | MS.gene70656 | 0.819069 | 1.41E-52 | -1.69E-46 |
| MS.gene053006 | MS.gene70656 | 0.805421 | 1.35E-49 | -1.69E-46 |
| MS.gene053079 | MS.gene70656 | 0.805323 | 1.41E-49 | -1.69E-46 |
| MS.gene05308 | MS.gene70656 | 0.8009 | 1.16E-48 | -1.69E-46 |
| MS.gene053122 | MS.gene70656 | 0.849128 | 3.94E-60 | -1.69E-46 |
| MS.gene053195 | MS.gene70656 | 0.83128 | 1.83E-55 | -1.69E-46 |
| MS.gene053226 | MS.gene70656 | 0.876246 | 1.63E-68 | -1.69E-46 |
| MS.gene053272 | MS.gene70656 | -0.833283 | 5.83E-56 | -1.69E-46 |
| MS.gene053296 | MS.gene70656 | 0.800386 | 1.48E-48 | -1.69E-46 |
| MS.gene053298 | MS.gene70656 | 0.818422 | 1.98E-52 | -1.69E-46 |
| MS.gene053321 | MS.gene70656 | 0.805698 | 1.18E-49 | -1.69E-46 |
| MS.gene053599 | MS.gene70656 | 0.819813 | 9.54E-53 | -1.69E-46 |
| MS.gene05364 | MS.gene70656 | 0.818483 | 1.91E-52 | -1.69E-46 |
| MS.gene05365 | MS.gene70656 | 0.837569 | 4.81E-57 | -1.69E-46 |
| MS.gene053931 | MS.gene70656 | 0.819766 | 9.78E-53 | -1.69E-46 |
| MS.gene053963 | MS.gene70656 | 0.832986 | 6.91E-56 | -1.69E-46 |
| MS.gene053995 | MS.gene70656 | 0.813721 | 2.22E-51 | -1.69E-46 |
| MS.gene054142 | MS.gene70656 | 0.847231 | 1.32E-59 | -1.69E-46 |
| MS.gene054178 | MS.gene70656 | 0.814705 | 1.34E-51 | -1.69E-46 |
| MS.gene054222 | MS.gene70656 | 0.828297 | 9.72E-55 | -1.69E-46 |
| MS.gene05423 | MS.gene70656 | 0.840472 | 8.52E-58 | -1.69E-46 |
| MS.gene054576 | MS.gene70656 | 0.817291 | 3.56E-52 | -1.69E-46 |
| MS.gene05458 | MS.gene70656 | 0.844887 | 5.72E-59 | -1.69E-46 |
| MS.gene054651 | MS.gene70656 | 0.858422 | 8.33E-63 | -1.69E-46 |
| MS.gene054775 | MS.gene70656 | 0.816477 | 5.42E-52 | -1.69E-46 |
| MS.gene054892 | MS.gene70656 | 0.811723 | 6.07E-51 | -1.69E-46 |
| MS.gene054893 | MS.gene70656 | 0.810807 | 9.59E-51 | -1.69E-46 |
| MS.gene054957 | MS.gene70656 | 0.816244 | 6.11E-52 | -1.69E-46 |
| MS.gene054991 | MS.gene70656 | 0.829493 | 4.99E-55 | -1.69E-46 |
| MS.gene05517 | MS.gene70656 | 0.803962 | 2.71E-49 | -1.69E-46 |
| MS.gene055229 | MS.gene70656 | 0.819003 | 1.46E-52 | -1.69E-46 |
| MS.gene055466 | MS.gene70656 | 0.803578 | 3.26E-49 | -1.69E-46 |
| MS.gene055468 | MS.gene70656 | 0.800709 | 1.27E-48 | -1.69E-46 |
| MS.gene055513 | MS.gene70656 | 0.840347 | 9.18E-58 | -1.69E-46 |
| MS.gene055555 | MS.gene70656 | 0.812042 | 5.17E-51 | -1.69E-46 |
| MS.gene055586 | MS.gene70656 | 0.823233 | 1.55E-53 | -1.69E-46 |
| MS.gene055589 | MS.gene70656 | 0.813384 | 2.63E-51 | -1.69E-46 |
| MS.gene055694 | MS.gene70656 | 0.853494 | 2.30E-61 | -1.69E-46 |
| MS.gene055778 | MS.gene70656 | 0.81408 | 1.85E-51 | -1.69E-46 |
| MS.gene055801 | MS.gene70656 | 0.82923 | 5.78E-55 | -1.69E-46 |
| MS.gene055808 | MS.gene70656 | 0.822382 | 2.44E-53 | -1.69E-46 |
| MS.gene055818 | MS.gene70656 | 0.805984 | 1.02E-49 | -1.69E-46 |
| MS.gene055841 | MS.gene70656 | 0.82352 | 1.33E-53 | -1.69E-46 |
| MS.gene056050 | MS.gene70656 | 0.849652 | 2.82E-60 | -1.69E-46 |
| MS.gene056082 | MS.gene70656 | 0.830937 | 2.22E-55 | -1.69E-46 |
| MS.gene056091 | MS.gene70656 | 0.816495 | 5.37E-52 | -1.69E-46 |
| MS.gene056162 | MS.gene70656 | 0.80495 | 1.69E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene70656 | 0.842256 | 2.89E-58 | -1.69E-46 |
| MS.gene056215 | MS.gene70656 | 0.859631 | 3.62E-63 | -1.69E-46 |
| MS.gene056272 | MS.gene70656 | 0.803415 | 3.52E-49 | -1.69E-46 |
| MS.gene056308 | MS.gene70656 | 0.817634 | 2.98E-52 | -1.69E-46 |
| MS.gene056366 | MS.gene70656 | 0.819769 | 9.76E-53 | -1.69E-46 |
| MS.gene05636 | MS.gene70656 | 0.802167 | 6.38E-49 | -1.69E-46 |
| MS.gene056595 | MS.gene70656 | 0.821919 | 3.13E-53 | -1.69E-46 |
| MS.gene056699 | MS.gene70656 | 0.825012 | 5.91E-54 | -1.69E-46 |
| MS.gene056776 | MS.gene70656 | 0.838822 | 2.29E-57 | -1.69E-46 |
| MS.gene05686 | MS.gene70656 | 0.87482 | 5.01E-68 | -1.69E-46 |
| MS.gene05689 | MS.gene70656 | 0.855811 | 4.91E-62 | -1.69E-46 |
| MS.gene05690 | MS.gene70656 | 0.833802 | 4.33E-56 | -1.69E-46 |
| MS.gene056973 | MS.gene70656 | 0.804274 | 2.34E-49 | -1.69E-46 |
| MS.gene056986 | MS.gene70656 | 0.847592 | 1.05E-59 | -1.69E-46 |
| MS.gene057034 | MS.gene70656 | 0.813312 | 2.73E-51 | -1.69E-46 |
| MS.gene057102 | MS.gene70656 | 0.897639 | 1.16E-76 | -1.69E-46 |
| MS.gene057208 | MS.gene70656 | 0.872012 | 4.41E-67 | -1.69E-46 |
| MS.gene057314 | MS.gene70656 | 0.8036 | 3.23E-49 | -1.69E-46 |
| MS.gene057598 | MS.gene70656 | 0.834874 | 2.33E-56 | -1.69E-46 |
| MS.gene057611 | MS.gene70656 | 0.816719 | 4.78E-52 | -1.69E-46 |
| MS.gene057693 | MS.gene70656 | 0.80086 | 1.18E-48 | -1.69E-46 |
| MS.gene057890 | MS.gene70656 | -0.803365 | 3.61E-49 | -1.69E-46 |
| MS.gene057893 | MS.gene70656 | -0.84035 | 9.17E-58 | -1.69E-46 |
| MS.gene057915 | MS.gene70656 | 0.814362 | 1.60E-51 | -1.69E-46 |
| MS.gene058008 | MS.gene70656 | 0.836089 | 1.15E-56 | -1.69E-46 |
| MS.gene058009 | MS.gene70656 | 0.826708 | 2.34E-54 | -1.69E-46 |
| MS.gene058037 | MS.gene70656 | 0.834599 | 2.73E-56 | -1.69E-46 |
| MS.gene058159 | MS.gene70656 | 0.841991 | 3.40E-58 | -1.69E-46 |
| MS.gene058279 | MS.gene70656 | 0.82134 | 4.25E-53 | -1.69E-46 |
| MS.gene058330 | MS.gene70656 | 0.808261 | 3.38E-50 | -1.69E-46 |
| MS.gene058355 | MS.gene70656 | 0.821269 | 4.42E-53 | -1.69E-46 |
| MS.gene058625 | MS.gene70656 | 0.830742 | 2.47E-55 | -1.69E-46 |
| MS.gene058781 | MS.gene70656 | 0.831928 | 1.26E-55 | -1.69E-46 |
| MS.gene058783 | MS.gene70656 | 0.841499 | 4.58E-58 | -1.69E-46 |
| MS.gene058979 | MS.gene70656 | 0.82471 | 6.96E-54 | -1.69E-46 |
| MS.gene059146 | MS.gene70656 | 0.831734 | 1.41E-55 | -1.69E-46 |
| MS.gene059170 | MS.gene70656 | 0.806324 | 8.69E-50 | -1.69E-46 |
| MS.gene059227 | MS.gene70656 | 0.804468 | 2.13E-49 | -1.69E-46 |
| MS.gene05950 | MS.gene70656 | 0.803199 | 3.91E-49 | -1.69E-46 |
| MS.gene05952 | MS.gene70656 | 0.834302 | 3.24E-56 | -1.69E-46 |
| MS.gene05954 | MS.gene70656 | 0.828416 | 9.10E-55 | -1.69E-46 |
| MS.gene059625 | MS.gene70656 | 0.851237 | 1.01E-60 | -1.69E-46 |
| MS.gene059778 | MS.gene70656 | 0.808152 | 3.56E-50 | -1.69E-46 |
| MS.gene059842 | MS.gene70656 | 0.802468 | 5.53E-49 | -1.69E-46 |
| MS.gene05985 | MS.gene70656 | -0.885769 | 6.11E-72 | -1.69E-46 |
| MS.gene059901 | MS.gene70656 | -0.82375 | 1.17E-53 | -1.69E-46 |
| MS.gene059935 | MS.gene70656 | 0.855132 | 7.75E-62 | -1.69E-46 |
| MS.gene060258 | MS.gene70656 | 0.81007 | 1.38E-50 | -1.69E-46 |
| MS.gene060338 | MS.gene70656 | 0.822549 | 2.23E-53 | -1.69E-46 |
| MS.gene060352 | MS.gene70656 | 0.803857 | 2.85E-49 | -1.69E-46 |
| MS.gene060365 | MS.gene70656 | 0.874208 | 8.08E-68 | -1.69E-46 |
| MS.gene060429 | MS.gene70656 | 0.836767 | 7.72E-57 | -1.69E-46 |
| MS.gene060435 | MS.gene70656 | 0.805636 | 1.21E-49 | -1.69E-46 |
| MS.gene060512 | MS.gene70656 | 0.814583 | 1.43E-51 | -1.69E-46 |
| MS.gene060521 | MS.gene70656 | 0.83765 | 4.59E-57 | -1.69E-46 |
| MS.gene060933 | MS.gene70656 | 0.825631 | 4.22E-54 | -1.69E-46 |
| MS.gene060935 | MS.gene70656 | 0.871059 | 9.11E-67 | -1.69E-46 |
| MS.gene060937 | MS.gene70656 | 0.868595 | 5.81E-66 | -1.69E-46 |
| MS.gene06094 | MS.gene70656 | 0.803756 | 2.99E-49 | -1.69E-46 |
| MS.gene061100 | MS.gene70656 | 0.849917 | 2.38E-60 | -1.69E-46 |
| MS.gene061160 | MS.gene70656 | 0.843949 | 1.02E-58 | -1.69E-46 |
| MS.gene061188 | MS.gene70656 | 0.850548 | 1.58E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70656.t1 | MTR_3g077320 | 95.989 | 374 | 11 | 1 | 1 | 370 | 1 | 374 | 0.0 | 730 |
| MS.gene70656.t1 | MTR_3g077320 | 99.259 | 270 | 2 | 0 | 1 | 270 | 1 | 270 | 0.0 | 558 |
| MS.gene70656.t1 | MTR_0325s0020 | 68.770 | 317 | 94 | 3 | 10 | 322 | 209 | 524 | 3.05e-147 | 427 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70656.t1 | AT3G54170 | 69.097 | 288 | 74 | 4 | 10 | 292 | 7 | 284 | 7.55e-134 | 385 |
Find 91 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGACTCTTCGGATGATTTC+AGG | 0.161909 | 3.1:+63578166 | None:intergenic |
| TTCGATTTCGGAGGTGAAAT+TGG | 0.256929 | 3.1:-63580611 | MS.gene70656:CDS |
| GAAATTGGTGGAAGGCATTC+AGG | 0.288629 | 3.1:-63580596 | MS.gene70656:intron |
| CATCTTCCCCATCTTGCTTT+GGG | 0.292814 | 3.1:+63575674 | None:intergenic |
| CATTAAAACATTTGCAAAAC+GGG | 0.325057 | 3.1:-63578007 | MS.gene70656:CDS |
| GCATCTTCCCCATCTTGCTT+TGG | 0.337652 | 3.1:+63575673 | None:intergenic |
| AGTTTCTTCAACTTTAGATT+TGG | 0.349237 | 3.1:+63579022 | None:intergenic |
| AATCAATCAATTACCTTCTT+CGG | 0.359272 | 3.1:+63580439 | None:intergenic |
| TAATCTTCGTCGTCGTAATC+CGG | 0.402595 | 3.1:+63580481 | None:intergenic |
| TTACATCGTCGAAACGAGTT+GGG | 0.405362 | 3.1:+63580716 | None:intergenic |
| GACGGAGACTGAGGAGGATA+AGG | 0.410738 | 3.1:-63573778 | MS.gene70656:CDS |
| TATAAGCATACCTGCATTGA+TGG | 0.414521 | 3.1:+63577169 | None:intergenic |
| AATGTTGATGAATTATCTTC+AGG | 0.414876 | 3.1:-63578190 | MS.gene70656:CDS |
| GTATGTGCTGGGGCTACTCC+AGG | 0.422901 | 3.1:-63578357 | MS.gene70656:intron |
| TGAAGAGTTCACACGTTTGA+AGG | 0.425230 | 3.1:-63576488 | MS.gene70656:intron |
| GGCGGTGACTGAGGAGGATA+AGG | 0.427854 | 3.1:-63573748 | MS.gene70656:CDS |
| GCTTTGGGAAGTAAATGTTA+TGG | 0.432063 | 3.1:+63575689 | None:intergenic |
| CAACTCAGAAGTCAATTTGA+AGG | 0.433565 | 3.1:-63575327 | MS.gene70656:intron |
| CTGCTCTCTCAATGACTCTT+CGG | 0.440775 | 3.1:+63578155 | None:intergenic |
| TGAGGAGGATAAGGAGGATA+AGG | 0.441776 | 3.1:-63573769 | MS.gene70656:CDS |
| TGACTCTTCGGATGATTTCA+GGG | 0.444705 | 3.1:+63578167 | None:intergenic |
| AAACTTTCAGTCTGCTGTGC+GGG | 0.448301 | 3.1:-63577215 | MS.gene70656:intron |
| ATTACCTTCTTCGGTGCAAA+AGG | 0.449253 | 3.1:+63580448 | None:intergenic |
| CAAGAAGAAAACGAGGAGAT+TGG | 0.450411 | 3.1:-63575627 | MS.gene70656:CDS |
| TCATTAAAACATTTGCAAAA+CGG | 0.457616 | 3.1:-63578008 | MS.gene70656:CDS |
| TACAGGGTTGCAGAAGCATA+TGG | 0.468685 | 3.1:-63574853 | MS.gene70656:intron |
| TTGCAGCCTCCAGAGCTGTA+AGG | 0.469485 | 3.1:-63578862 | MS.gene70656:intron |
| TTTACTTCCCAAAGCAAGAT+GGG | 0.471815 | 3.1:-63575681 | MS.gene70656:CDS |
| CTCATCCTATCAGAATTTAG+TGG | 0.474105 | 3.1:-63575757 | MS.gene70656:intron |
| AATGAGCCTGTTGTATGTGC+TGG | 0.474348 | 3.1:-63578369 | MS.gene70656:CDS |
| AAGGAGGTTGTTACTAGATC+CGG | 0.480093 | 3.1:-63576518 | MS.gene70656:CDS |
| TACTGGTTGTCAGCTTGAAA+AGG | 0.490273 | 3.1:-63578052 | MS.gene70656:intron |
| GTAGCCCCAGCACATACAAC+AGG | 0.493156 | 3.1:+63578363 | None:intergenic |
| CAAGCCGATCCTTACAGCTC+TGG | 0.493375 | 3.1:+63578853 | None:intergenic |
| GAAGCTAGACGAGAAAGGTC+AGG | 0.497595 | 3.1:-63573913 | MS.gene70656:CDS |
| CGAAGAGTCATTGAGAGAGC+AGG | 0.497852 | 3.1:-63578154 | MS.gene70656:intron |
| ATGAGCCTGTTGTATGTGCT+GGG | 0.502100 | 3.1:-63578368 | MS.gene70656:CDS |
| ACTGCCTCTGGTGTAACAAC+AGG | 0.502296 | 3.1:-63579002 | MS.gene70656:CDS |
| ATTTACTTCCCAAAGCAAGA+TGG | 0.502506 | 3.1:-63575682 | MS.gene70656:CDS |
| CTTACATCGTCGAAACGAGT+TGG | 0.509237 | 3.1:+63580715 | None:intergenic |
| GGATTTGCAAGATAACATTA+CGG | 0.511867 | 3.1:-63575712 | MS.gene70656:CDS |
| CAAAAGAACTTAGCGGAGGA+TGG | 0.520918 | 3.1:-63573861 | MS.gene70656:CDS |
| TAAGAGTGAAAGTGATAAGA+CGG | 0.527835 | 3.1:-63573817 | MS.gene70656:CDS |
| TCACTTTCACTCTTACTATG+TGG | 0.535531 | 3.1:+63573825 | None:intergenic |
| AAAGTTGAAGAAACTGCCTC+TGG | 0.544941 | 3.1:-63579014 | MS.gene70656:CDS |
| AGAACTTAGCGGAGGATGGA+AGG | 0.546938 | 3.1:-63573857 | MS.gene70656:CDS |
| CAAGAGAAGCTAGACGAGAA+AGG | 0.550101 | 3.1:-63573918 | MS.gene70656:CDS |
| TGATAAGACGGTGGCTGAGG+AGG | 0.550918 | 3.1:-63573805 | MS.gene70656:CDS |
| ACTCAAGCCGCCATCAATGC+AGG | 0.552351 | 3.1:-63577179 | MS.gene70656:intron |
| AAGTGATAAGACGGTGGCTG+AGG | 0.557949 | 3.1:-63573808 | MS.gene70656:CDS |
| CAAAGTCTGAGATTCATAGT+TGG | 0.562090 | 3.1:-63578407 | MS.gene70656:CDS |
| TCAGAATTTAGTGGAGGAGA+AGG | 0.567099 | 3.1:-63575748 | MS.gene70656:intron |
| GATTTCGGAGGTGAAATTGG+TGG | 0.567451 | 3.1:-63580608 | MS.gene70656:CDS |
| GTGAACTCTTCATGAACAGC+CGG | 0.571799 | 3.1:+63576499 | None:intergenic |
| TCGTCGTCGTAATCCGGCGA+TGG | 0.576592 | 3.1:+63580487 | None:intergenic |
| AAATCAAGCTTCTGAAGGAA+AGG | 0.576681 | 3.1:-63575604 | MS.gene70656:intron |
| GCCTCCAGAGCTGTAAGGAT+CGG | 0.577211 | 3.1:-63578857 | MS.gene70656:CDS |
| TGTGGAGAGATCAAATGAAA+CGG | 0.578417 | 3.1:-63574814 | MS.gene70656:intron |
| GTATTTCCAGAGTGAGCTTG+AGG | 0.596741 | 3.1:-63578433 | MS.gene70656:intron |
| GCCGATCCTTACAGCTCTGG+AGG | 0.599157 | 3.1:+63578856 | None:intergenic |
| GGAGGATAAGGCGGTGACTG+AGG | 0.608632 | 3.1:-63573757 | MS.gene70656:CDS |
| TCGGAGGTGAAATTGGTGGA+AGG | 0.608878 | 3.1:-63580604 | MS.gene70656:CDS |
| GGTGGCTGAGGAGGATAAGA+CGG | 0.610117 | 3.1:-63573796 | MS.gene70656:CDS |
| GGATAAGACAGTGACTGAGG+AGG | 0.613022 | 3.1:-63573712 | MS.gene70656:CDS |
| GGAGGATAAGACAGTGACTG+AGG | 0.614473 | 3.1:-63573715 | MS.gene70656:CDS |
| ACTCCAGCAAAAGAACTTAG+CGG | 0.619444 | 3.1:-63573868 | MS.gene70656:CDS |
| TACATCGTCGAAACGAGTTG+GGG | 0.620919 | 3.1:+63580717 | None:intergenic |
| GGAGACTGAGGAGGATAAGG+AGG | 0.624335 | 3.1:-63573775 | MS.gene70656:CDS |
| ATTGGAAATCAAGCTTCTGA+AGG | 0.624930 | 3.1:-63575609 | MS.gene70656:CDS |
| GGAGGATAAGGCGGTGACTG+AGG | 0.626582 | 3.1:-63573736 | MS.gene70656:CDS |
| GGATAAGGCGGTGACTGAGG+AGG | 0.629527 | 3.1:-63573733 | MS.gene70656:CDS |
| GGATAAGGCGGTGACTGAGG+AGG | 0.629527 | 3.1:-63573754 | MS.gene70656:CDS |
| CATTCCTGTTGTTACACCAG+AGG | 0.631750 | 3.1:+63578998 | None:intergenic |
| TGATCTTGTCACTTCGTGAG+AGG | 0.642970 | 3.1:-63578977 | MS.gene70656:intron |
| CAAGATGGGGAAGATGCTGA+TGG | 0.643010 | 3.1:-63575667 | MS.gene70656:CDS |
| GGAGGATAAGACGGAGACTG+AGG | 0.643669 | 3.1:-63573787 | MS.gene70656:CDS |
| GAAACTTTCAGTCTGCTGTG+CGG | 0.644244 | 3.1:-63577216 | MS.gene70656:intron |
| GGATAAGACGGAGACTGAGG+AGG | 0.651981 | 3.1:-63573784 | MS.gene70656:CDS |
| AAGCATACCTGCATTGATGG+CGG | 0.659147 | 3.1:+63577172 | None:intergenic |
| GGGTTGCAGAAGCATATGGA+AGG | 0.661064 | 3.1:-63574849 | MS.gene70656:CDS |
| ATCCTATCAGAATTTAGTGG+AGG | 0.662269 | 3.1:-63575754 | MS.gene70656:intron |
| AAAACGGGAGCAAGAGATAG+CGG | 0.663083 | 3.1:-63577992 | MS.gene70656:CDS |
| TTACTTCCCAAAGCAAGATG+GGG | 0.664236 | 3.1:-63575680 | MS.gene70656:CDS |
| GGAAGGACTGACAAATGATG+TGG | 0.666612 | 3.1:-63574832 | MS.gene70656:CDS |
| AGGTAATAAGAGACCATCGC+CGG | 0.668265 | 3.1:-63580500 | MS.gene70656:CDS |
| AACCCTGCAAGAAGAAAACG+AGG | 0.669091 | 3.1:-63575634 | MS.gene70656:CDS |
| CCAGCAAAAGAACTTAGCGG+AGG | 0.696105 | 3.1:-63573865 | MS.gene70656:CDS |
| GGAGGATAAGGAGGATAAGG+CGG | 0.697058 | 3.1:-63573766 | MS.gene70656:CDS |
| GGTGACTGAGGAGGATAAGG+CGG | 0.699747 | 3.1:-63573745 | MS.gene70656:CDS |
| TGAGCCTGTTGTATGTGCTG+GGG | 0.705363 | 3.1:-63578367 | MS.gene70656:CDS |
| GAGTGAAAGTGATAAGACGG+TGG | 0.727349 | 3.1:-63573814 | MS.gene70656:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 63573701 | 63580746 | 63573701 | ID=MS.gene70656 |
| chr3.1 | mRNA | 63573701 | 63580746 | 63573701 | ID=MS.gene70656.t1;Parent=MS.gene70656 |
| chr3.1 | exon | 63580720 | 63580746 | 63580720 | ID=MS.gene70656.t1.exon1;Parent=MS.gene70656.t1 |
| chr3.1 | CDS | 63580720 | 63580746 | 63580720 | ID=cds.MS.gene70656.t1;Parent=MS.gene70656.t1 |
| chr3.1 | exon | 63580597 | 63580636 | 63580597 | ID=MS.gene70656.t1.exon2;Parent=MS.gene70656.t1 |
| chr3.1 | CDS | 63580597 | 63580636 | 63580597 | ID=cds.MS.gene70656.t1;Parent=MS.gene70656.t1 |
| chr3.1 | exon | 63580453 | 63580520 | 63580453 | ID=MS.gene70656.t1.exon3;Parent=MS.gene70656.t1 |
| chr3.1 | CDS | 63580453 | 63580520 | 63580453 | ID=cds.MS.gene70656.t1;Parent=MS.gene70656.t1 |
| chr3.1 | exon | 63578978 | 63579045 | 63578978 | ID=MS.gene70656.t1.exon4;Parent=MS.gene70656.t1 |
| chr3.1 | CDS | 63578978 | 63579045 | 63578978 | ID=cds.MS.gene70656.t1;Parent=MS.gene70656.t1 |
| chr3.1 | exon | 63578842 | 63578878 | 63578842 | ID=MS.gene70656.t1.exon5;Parent=MS.gene70656.t1 |
| chr3.1 | CDS | 63578842 | 63578878 | 63578842 | ID=cds.MS.gene70656.t1;Parent=MS.gene70656.t1 |
| chr3.1 | exon | 63578358 | 63578445 | 63578358 | ID=MS.gene70656.t1.exon6;Parent=MS.gene70656.t1 |
| chr3.1 | CDS | 63578358 | 63578445 | 63578358 | ID=cds.MS.gene70656.t1;Parent=MS.gene70656.t1 |
| chr3.1 | exon | 63578155 | 63578219 | 63578155 | ID=MS.gene70656.t1.exon7;Parent=MS.gene70656.t1 |
| chr3.1 | CDS | 63578155 | 63578219 | 63578155 | ID=cds.MS.gene70656.t1;Parent=MS.gene70656.t1 |
| chr3.1 | exon | 63577984 | 63578061 | 63577984 | ID=MS.gene70656.t1.exon8;Parent=MS.gene70656.t1 |
| chr3.1 | CDS | 63577984 | 63578061 | 63577984 | ID=cds.MS.gene70656.t1;Parent=MS.gene70656.t1 |
| chr3.1 | exon | 63577180 | 63577227 | 63577180 | ID=MS.gene70656.t1.exon9;Parent=MS.gene70656.t1 |
| chr3.1 | CDS | 63577180 | 63577227 | 63577180 | ID=cds.MS.gene70656.t1;Parent=MS.gene70656.t1 |
| chr3.1 | exon | 63576489 | 63576542 | 63576489 | ID=MS.gene70656.t1.exon10;Parent=MS.gene70656.t1 |
| chr3.1 | CDS | 63576489 | 63576542 | 63576489 | ID=cds.MS.gene70656.t1;Parent=MS.gene70656.t1 |
| chr3.1 | exon | 63575605 | 63575766 | 63575605 | ID=MS.gene70656.t1.exon11;Parent=MS.gene70656.t1 |
| chr3.1 | CDS | 63575605 | 63575766 | 63575605 | ID=cds.MS.gene70656.t1;Parent=MS.gene70656.t1 |
| chr3.1 | exon | 63575328 | 63575397 | 63575328 | ID=MS.gene70656.t1.exon12;Parent=MS.gene70656.t1 |
| chr3.1 | CDS | 63575328 | 63575397 | 63575328 | ID=cds.MS.gene70656.t1;Parent=MS.gene70656.t1 |
| chr3.1 | exon | 63574815 | 63574870 | 63574815 | ID=MS.gene70656.t1.exon13;Parent=MS.gene70656.t1 |
| chr3.1 | CDS | 63574815 | 63574870 | 63574815 | ID=cds.MS.gene70656.t1;Parent=MS.gene70656.t1 |
| chr3.1 | exon | 63573701 | 63573952 | 63573701 | ID=MS.gene70656.t1.exon14;Parent=MS.gene70656.t1 |
| chr3.1 | CDS | 63573701 | 63573952 | 63573701 | ID=cds.MS.gene70656.t1;Parent=MS.gene70656.t1 |
| Gene Sequence |
| Protein sequence |
