AlfalfaGEDB | MS.gene63430

M. sativa cultivar XinJiangDaYe / MS.gene63430

KEGG: -
GO: -
PFAM: PF00168.33

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene63430.t1	XP_013460633.1	98.4	127	2	0	2	128	37	163	1.80E-67	265

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene63430.t1	Q9LP65	68.0	125	40	0	2	126	73	197	2.6e-46	186.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene63430.t1	B7FGT4	98.4	127	2	0	2	128	37	163	1.3e-67	265.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049142	MS.gene63430	0.814245	1.70E-51	-1.69E-46
MS.gene04918	MS.gene63430	0.981234	4.28E-152	-1.69E-46
MS.gene04919	MS.gene63430	0.949099	2.52E-107	-1.69E-46
MS.gene04920	MS.gene63430	0.955734	1.53E-113	-1.69E-46
MS.gene049254	MS.gene63430	0.811	8.71E-51	-1.69E-46
MS.gene049283	MS.gene63430	0.859633	3.61E-63	-1.69E-46
MS.gene049368	MS.gene63430	0.813676	2.27E-51	-1.69E-46
MS.gene049499	MS.gene63430	0.872369	3.35E-67	-1.69E-46
MS.gene049680	MS.gene63430	0.809739	1.63E-50	-1.69E-46
MS.gene049983	MS.gene63430	0.846083	2.71E-59	-1.69E-46
MS.gene050414	MS.gene63430	0.835183	1.95E-56	-1.69E-46
MS.gene050646	MS.gene63430	0.805799	1.12E-49	-1.69E-46
MS.gene050654	MS.gene63430	0.803366	3.61E-49	-1.69E-46
MS.gene050945	MS.gene63430	0.822665	2.10E-53	-1.69E-46
MS.gene051003	MS.gene63430	0.824719	6.93E-54	-1.69E-46
MS.gene051019	MS.gene63430	0.804074	2.57E-49	-1.69E-46
MS.gene051043	MS.gene63430	0.809651	1.70E-50	-1.69E-46
MS.gene051154	MS.gene63430	0.800294	1.54E-48	-1.69E-46
MS.gene051234	MS.gene63430	0.828082	1.10E-54	-1.69E-46
MS.gene051343	MS.gene63430	0.824817	6.57E-54	-1.69E-46
MS.gene051637	MS.gene63430	0.813371	2.65E-51	-1.69E-46
MS.gene051699	MS.gene63430	0.823394	1.42E-53	-1.69E-46
MS.gene051744	MS.gene63430	0.806239	9.06E-50	-1.69E-46
MS.gene051975	MS.gene63430	0.816369	5.73E-52	-1.69E-46
MS.gene052016	MS.gene63430	0.837738	4.35E-57	-1.69E-46
MS.gene052072	MS.gene63430	0.815628	8.39E-52	-1.69E-46
MS.gene052118	MS.gene63430	0.812971	3.24E-51	-1.69E-46
MS.gene052296	MS.gene63430	0.806372	8.49E-50	-1.69E-46
MS.gene052307	MS.gene63430	0.805131	1.55E-49	-1.69E-46
MS.gene052463	MS.gene63430	0.834279	3.29E-56	-1.69E-46
MS.gene052518	MS.gene63430	0.826675	2.38E-54	-1.69E-46
MS.gene052533	MS.gene63430	0.845702	3.44E-59	-1.69E-46
MS.gene052534	MS.gene63430	0.80704	6.14E-50	-1.69E-46
MS.gene052685	MS.gene63430	0.81888	1.56E-52	-1.69E-46
MS.gene052793	MS.gene63430	0.827138	1.85E-54	-1.69E-46
MS.gene053228	MS.gene63430	0.827921	1.20E-54	-1.69E-46
MS.gene053272	MS.gene63430	-0.821789	3.35E-53	-1.69E-46
MS.gene053295	MS.gene63430	0.801097	1.06E-48	-1.69E-46
MS.gene053298	MS.gene63430	0.808524	2.97E-50	-1.69E-46
MS.gene053786	MS.gene63430	0.805412	1.35E-49	-1.69E-46
MS.gene053931	MS.gene63430	0.815331	9.77E-52	-1.69E-46
MS.gene053963	MS.gene63430	0.808609	2.85E-50	-1.69E-46
MS.gene054004	MS.gene63430	0.812301	4.54E-51	-1.69E-46
MS.gene054142	MS.gene63430	0.814322	1.63E-51	-1.69E-46
MS.gene054178	MS.gene63430	0.826447	2.70E-54	-1.69E-46
MS.gene054222	MS.gene63430	0.811306	7.48E-51	-1.69E-46
MS.gene05458	MS.gene63430	0.825901	3.64E-54	-1.69E-46
MS.gene054651	MS.gene63430	0.815571	8.64E-52	-1.69E-46
MS.gene054892	MS.gene63430	0.842113	3.15E-58	-1.69E-46
MS.gene054893	MS.gene63430	0.849066	4.10E-60	-1.69E-46
MS.gene054957	MS.gene63430	0.827112	1.87E-54	-1.69E-46
MS.gene055150	MS.gene63430	0.818203	2.22E-52	-1.69E-46
MS.gene05539	MS.gene63430	0.80442	2.18E-49	-1.69E-46
MS.gene055513	MS.gene63430	0.832259	1.05E-55	-1.69E-46
MS.gene055801	MS.gene63430	0.804522	2.07E-49	-1.69E-46
MS.gene055841	MS.gene63430	0.804926	1.71E-49	-1.69E-46
MS.gene056082	MS.gene63430	0.817734	2.83E-52	-1.69E-46
MS.gene056215	MS.gene63430	0.8007	1.27E-48	-1.69E-46
MS.gene056699	MS.gene63430	0.843391	1.44E-58	-1.69E-46
MS.gene05686	MS.gene63430	0.830593	2.69E-55	-1.69E-46
MS.gene05689	MS.gene63430	0.806096	9.71E-50	-1.69E-46
MS.gene056986	MS.gene63430	0.809593	1.75E-50	-1.69E-46
MS.gene057102	MS.gene63430	0.856582	2.92E-62	-1.69E-46
MS.gene057155	MS.gene63430	0.807706	4.43E-50	-1.69E-46
MS.gene057208	MS.gene63430	0.827292	1.70E-54	-1.69E-46
MS.gene057622	MS.gene63430	0.819767	9.77E-53	-1.69E-46
MS.gene057890	MS.gene63430	-0.803243	3.83E-49	-1.69E-46
MS.gene057893	MS.gene63430	-0.828647	8.00E-55	-1.69E-46
MS.gene058008	MS.gene63430	0.80756	4.76E-50	-1.69E-46
MS.gene058095	MS.gene63430	0.821385	4.15E-53	-1.69E-46
MS.gene058159	MS.gene63430	0.847947	8.37E-60	-1.69E-46
MS.gene058592	MS.gene63430	0.830873	2.30E-55	-1.69E-46
MS.gene058781	MS.gene63430	0.841694	4.07E-58	-1.69E-46
MS.gene058783	MS.gene63430	0.824776	6.72E-54	-1.69E-46
MS.gene05878	MS.gene63430	0.827566	1.46E-54	-1.69E-46
MS.gene059146	MS.gene63430	0.856295	3.54E-62	-1.69E-46
MS.gene059170	MS.gene63430	0.826843	2.17E-54	-1.69E-46
MS.gene05952	MS.gene63430	0.839449	1.57E-57	-1.69E-46
MS.gene05956	MS.gene63430	0.822468	2.33E-53	-1.69E-46
MS.gene059634	MS.gene63430	0.818623	1.78E-52	-1.69E-46
MS.gene059778	MS.gene63430	0.830375	3.04E-55	-1.69E-46
MS.gene05985	MS.gene63430	-0.860465	2.03E-63	-1.69E-46
MS.gene059901	MS.gene63430	-0.852804	3.63E-61	-1.69E-46
MS.gene06011	MS.gene63430	0.804124	2.51E-49	-1.69E-46
MS.gene060259	MS.gene63430	0.802514	5.41E-49	-1.69E-46
MS.gene060435	MS.gene63430	0.812463	4.19E-51	-1.69E-46
MS.gene060512	MS.gene63430	0.824859	6.42E-54	-1.69E-46
MS.gene060522	MS.gene63430	0.821629	3.65E-53	-1.69E-46
MS.gene060527	MS.gene63430	0.813145	2.97E-51	-1.69E-46
MS.gene060932	MS.gene63430	0.808491	3.02E-50	-1.69E-46
MS.gene060933	MS.gene63430	0.838744	2.40E-57	-1.69E-46
MS.gene060935	MS.gene63430	0.860242	2.37E-63	-1.69E-46
MS.gene060937	MS.gene63430	0.872683	2.63E-67	-1.69E-46
MS.gene061100	MS.gene63430	0.875648	2.61E-68	-1.69E-46
MS.gene061160	MS.gene63430	0.832285	1.03E-55	-1.69E-46
MS.gene061188	MS.gene63430	0.839766	1.30E-57	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene63430.t1	MTR_3g067585	98.425	127	2	0	2	128	37	163	1.11e-92	265
MS.gene63430.t1	MTR_2g011590	82.677	127	22	0	2	128	36	162	1.58e-78	229
MS.gene63430.t1	MTR_8g107340	66.929	127	42	0	2	128	53	179	1.85e-63	191
MS.gene63430.t1	MTR_6g069470	63.780	127	46	0	2	128	49	175	5.74e-59	180
MS.gene63430.t1	MTR_1g031650	62.500	128	48	0	1	128	1	128	5.60e-58	176
MS.gene63430.t1	MTR_1g031650	62.205	127	48	0	2	128	39	165	1.57e-56	174
MS.gene63430.t1	MTR_4g084280	57.480	127	54	0	2	128	37	163	4.79e-50	157
MS.gene63430.t1	MTR_2g027100	40.496	121	70	1	2	120	37	157	3.42e-26	96.7
MS.gene63430.t1	MTR_8g038400	45.082	122	66	1	2	122	242	363	6.65e-26	100
MS.gene63430.t1	MTR_8g088320	39.516	124	74	1	2	124	197	320	8.88e-25	96.3
MS.gene63430.t1	MTR_2g030230	39.516	124	74	1	2	124	204	327	1.50e-24	95.9
MS.gene63430.t1	MTR_3g017500	42.857	126	63	2	2	122	245	366	1.43e-23	94.0
MS.gene63430.t1	MTR_3g017500	42.857	126	63	2	2	122	275	396	2.25e-23	93.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene63430.t1	AT3G17980	65.354	127	44	0	2	128	49	175	4.52e-61	185
MS.gene63430.t1	AT1G48590	68.000	125	40	0	2	126	42	166	5.55e-61	185
MS.gene63430.t1	AT1G48590	68.000	125	40	0	2	126	42	166	5.55e-61	185
MS.gene63430.t1	AT1G48590	68.000	125	40	0	2	126	73	197	1.11e-60	185
MS.gene63430.t1	AT5G37740	63.846	130	44	1	2	128	37	166	2.63e-58	178
MS.gene63430.t1	AT5G37740	63.077	130	45	1	2	128	47	176	2.98e-57	176
MS.gene63430.t1	AT1G66360	60.938	128	48	1	2	127	37	164	3.19e-56	173
MS.gene63430.t1	AT1G73580	59.055	127	52	0	2	128	40	166	1.33e-55	171
MS.gene63430.t1	AT1G70810	62.992	127	47	0	2	128	37	163	2.24e-55	170
MS.gene63430.t1	AT1G70790	62.016	129	47	1	2	128	38	166	2.36e-52	163
MS.gene63430.t1	AT1G70790	62.016	129	47	1	2	128	38	166	2.36e-52	163
MS.gene63430.t1	AT1G70790	62.016	129	47	1	2	128	38	166	2.36e-52	163
MS.gene63430.t1	AT1G70790	61.719	128	47	1	3	128	2	129	6.83e-52	161
MS.gene63430.t1	AT2G01540	57.364	129	53	1	2	128	38	166	7.80e-50	157
MS.gene63430.t1	AT1G23140	55.906	127	56	0	2	128	37	163	6.45e-48	151
MS.gene63430.t1	AT1G70800	55.556	126	56	0	2	127	46	171	6.45e-48	152
MS.gene63430.t1	AT1G48590	61.682	107	38	1	23	126	59	165	1.76e-43	140
MS.gene63430.t1	AT3G07940	47.059	119	62	1	2	119	260	378	2.27e-27	104
MS.gene63430.t1	AT5G47710	37.500	128	78	1	2	127	37	164	1.08e-26	97.8
MS.gene63430.t1	AT5G47710	37.500	128	78	1	2	127	37	164	1.08e-26	97.8
MS.gene63430.t1	AT5G47710	37.500	128	78	1	2	127	37	164	1.08e-26	97.8
MS.gene63430.t1	AT5G47710	37.500	128	78	1	2	127	37	164	1.08e-26	97.8
MS.gene63430.t1	AT4G05330	40.164	122	72	1	2	122	176	297	2.99e-23	92.0
MS.gene63430.t1	AT4G05330	40.164	122	72	1	2	122	211	332	5.28e-23	92.0
MS.gene63430.t1	AT4G05330	40.164	122	72	1	2	122	211	332	5.28e-23	92.0
MS.gene63430.t1	AT4G21160	40.984	122	71	1	2	122	212	333	8.07e-23	91.3
MS.gene63430.t1	AT4G21160	40.984	122	71	1	2	122	212	333	8.07e-23	91.3
MS.gene63430.t1	AT4G21160	40.984	122	71	1	2	122	212	333	8.07e-23	91.3
MS.gene63430.t1	AT4G21160	40.984	122	71	1	2	122	212	333	8.07e-23	91.3

Find 37 sgRNAs with CRISPR-Local

Find 59 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATTCAGCTTGGACGACAAAA+TGG	0.224120	3.4:-67989673	MS.gene63430:CDS
TTGCACTGGGTTGACATTCC+TGG	0.251961	3.4:-67989441	MS.gene63430:CDS
CAGAAGAGAGTCACATTGTT+TGG	0.286449	3.4:-67989536	MS.gene63430:CDS
TTAGTCTAAGAACCATGTTT+TGG	0.329440	3.4:+67989496	None:intergenic
CTTGTAACTATAGCCTCGTT+TGG	0.351980	3.4:+67989588	None:intergenic
GAATGTCAACCCAGTGCAAC+TGG	0.390071	3.4:+67989445	None:intergenic
AGTCACATTGTTTGGAAAGA+TGG	0.406065	3.4:-67989528	MS.gene63430:CDS
TTCAGCTTGGACGACAAAAT+GGG	0.451366	3.4:-67989672	MS.gene63430:CDS
TGGAGTATGAGGATCTGAAA+TGG	0.452578	3.4:+67990319	None:intergenic
AAGTGGAACTCCAGTTGCAC+TGG	0.453056	3.4:-67989455	MS.gene63430:CDS
TTGTAACTATAGCCTCGTTT+GGG	0.469930	3.4:+67989589	None:intergenic
GGTTGACATTCCTGGTTCAA+AGG	0.472769	3.4:-67989433	MS.gene63430:CDS
GCAGTAAAGATGCGGTTGGC+AGG	0.486595	3.4:-67989615	MS.gene63430:CDS
AAGTTACTTACTAGATGGAT+TGG	0.500412	3.4:+67990299	None:intergenic
GACTAAGAAATGTTGAATGT+GGG	0.501409	3.4:-67989479	MS.gene63430:CDS
GTTGACATTCCTGGTTCAAA+GGG	0.509321	3.4:-67989432	None:intergenic
CAAACGAGGCTATAGTTACA+AGG	0.509760	3.4:-67989587	MS.gene63430:CDS
ACTAGATGGATTGGAGTATG+AGG	0.510431	3.4:+67990308	None:intergenic
AAATGTTGAATGTGGGGAAG+TGG	0.522688	3.4:-67989472	MS.gene63430:CDS
AGACTAAGAAATGTTGAATG+TGG	0.533532	3.4:-67989480	MS.gene63430:CDS
AATGCAGTTTGTGTATGATA+AGG	0.538833	3.4:-67989700	MS.gene63430:intron
TGATGCAGAAGCTGAAGACC+AGG	0.545692	3.4:-67990391	MS.gene63430:CDS
GTCAAGTCCTCGTCCCACTC+AGG	0.564180	3.4:+67990347	None:intergenic
ACCTACATACCCTTTGAACC+AGG	0.570746	3.4:+67989423	None:intergenic
TGATAAGGACACATTCAGCT+TGG	0.578342	3.4:-67989685	MS.gene63430:CDS
TCTAAATCCTGAGTGGGACG+AGG	0.583435	3.4:-67990354	MS.gene63430:CDS
TGAAGCAGTAAAGATGCGGT+TGG	0.586646	3.4:-67989619	MS.gene63430:CDS
TCAGCTTGGACGACAAAATG+GGG	0.593533	3.4:-67989671	MS.gene63430:CDS
AAAGAATCTAAATCCTGAGT+GGG	0.594479	3.4:-67990360	MS.gene63430:CDS
AGTGGAACTCCAGTTGCACT+GGG	0.596489	3.4:-67989454	MS.gene63430:CDS
ACTAAGAAATGTTGAATGTG+GGG	0.600301	3.4:-67989478	MS.gene63430:CDS
AAAAGAATCTAAATCCTGAG+TGG	0.649840	3.4:-67990361	MS.gene63430:CDS
GTTGGCAGGTCTCCCAAACG+AGG	0.664369	3.4:-67989601	MS.gene63430:CDS
GGGGACGCTGAGTTTGACAT+CGG	0.670252	3.4:-67989651	MS.gene63430:CDS
AAACGAGGCTATAGTTACAA+GGG	0.687881	3.4:-67989586	MS.gene63430:CDS
GATGCAGAAGCTGAAGACCA+GGG	0.702840	3.4:-67990390	MS.gene63430:CDS
CAGCTTGGACGACAAAATGG+GGG	0.704105	3.4:-67989670	MS.gene63430:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAAGATAAATGAAAAATTT+AGG	-	chr3.4:67989586-67989605	MS.gene63430:CDS	10.0%
!!	ACTATCTGAATATTAAAAAA+TGG	-	chr3.4:67990062-67990081	MS.gene63430:intron	15.0%
!!!	CGAAAATAAGTTATATTTTA+GGG	-	chr3.4:67989785-67989804	MS.gene63430:intron	15.0%
!!	ATCATGAACATTATCAAATA+TGG	-	chr3.4:67989810-67989829	MS.gene63430:intron	20.0%
!!	TCATGAACATTATCAAATAT+GGG	-	chr3.4:67989811-67989830	MS.gene63430:intron	20.0%
!!	TGCTTATTGTAATATGAATT+TGG	-	chr3.4:67989967-67989986	MS.gene63430:intron	20.0%
!!	TTATTGTAATATGAATTTGG+TGG	-	chr3.4:67989970-67989989	MS.gene63430:intron	20.0%
!!!	GCGAAAATAAGTTATATTTT+AGG	-	chr3.4:67989784-67989803	MS.gene63430:intron	20.0%
!!!	TATAACTTATTTTCGCTATA+AGG	+	chr3.4:67989780-67989799	None:intergenic	20.0%
!!!	TGTGTTTCAAATCAAAATTT+TGG	-	chr3.4:67989560-67989579	MS.gene63430:CDS	20.0%
!	AAGAAAAGTTACTTACTAGA+TGG	+	chr3.4:67989531-67989550	None:intergenic	25.0%
!	ATCTTTACTGCTTCAAAAAA+TGG	+	chr3.4:67990198-67990217	None:intergenic	25.0%
!	CATGAACATTATCAAATATG+GGG	-	chr3.4:67989812-67989831	MS.gene63430:intron	25.0%
!	TCTTTACTGCTTCAAAAAAT+GGG	+	chr3.4:67990197-67990216	None:intergenic	25.0%
!!	AATTAGTTCAAGTTCTTACT+TGG	-	chr3.4:67989849-67989868	MS.gene63430:intron	25.0%
!!	ACATGATAAGACTTTTCAAT+TGG	-	chr3.4:67989702-67989721	MS.gene63430:intron	25.0%
!!	TGGTAAAATTTTCCAAAACA+TGG	-	chr3.4:67990314-67990333	MS.gene63430:CDS	25.0%
	AAAAGAATCTAAATCCTGAG+TGG	-	chr3.4:67989461-67989480	MS.gene63430:CDS	30.0%
	AAAGAATCTAAATCCTGAGT+GGG	-	chr3.4:67989462-67989481	MS.gene63430:CDS	30.0%
	AAGTTACTTACTAGATGGAT+TGG	+	chr3.4:67989526-67989545	None:intergenic	30.0%
	AATGCAGTTTGTGTATGATA+AGG	-	chr3.4:67990122-67990141	MS.gene63430:intron	30.0%
	ACTAAGAAATGTTGAATGTG+GGG	-	chr3.4:67990344-67990363	MS.gene63430:CDS	30.0%
	AGACTAAGAAATGTTGAATG+TGG	-	chr3.4:67990342-67990361	MS.gene63430:CDS	30.0%
	GACTAAGAAATGTTGAATGT+GGG	-	chr3.4:67990343-67990362	MS.gene63430:CDS	30.0%
!	GATATGAAATTTTCTCGCTT+TGG	-	chr3.4:67989618-67989637	MS.gene63430:CDS	30.0%
!	TGTAATATGAATTTGGTGGA+AGG	-	chr3.4:67989974-67989993	MS.gene63430:intron	30.0%
!	TTAGTCTAAGAACCATGTTT+TGG	+	chr3.4:67990329-67990348	None:intergenic	30.0%
!!!	TTTTTGAAGCAGTAAAGATG+CGG	-	chr3.4:67990199-67990218	MS.gene63430:intron	30.0%
	AAACGAGGCTATAGTTACAA+GGG	-	chr3.4:67990236-67990255	MS.gene63430:intron	35.0%
	AGTCACATTGTTTGGAAAGA+TGG	-	chr3.4:67990294-67990313	MS.gene63430:intron	35.0%
	TCTCATATTATCCGCTGTTA+AGG	-	chr3.4:67989876-67989895	MS.gene63430:intron	35.0%
	TTGTAACTATAGCCTCGTTT+GGG	+	chr3.4:67990236-67990255	None:intergenic	35.0%
!	CGTGTATTTTACCTTAACAG+CGG	+	chr3.4:67989890-67989909	None:intergenic	35.0%
!	GAAATTTTCTCGCTTTGGTT+TGG	-	chr3.4:67989623-67989642	MS.gene63430:CDS	35.0%
!!	TAGATTCTTTTTCACTACCC+TGG	+	chr3.4:67989452-67989471	None:intergenic	35.0%
	AAATGTTGAATGTGGGGAAG+TGG	-	chr3.4:67990350-67990369	MS.gene63430:CDS	40.0%
	ATTCAGCTTGGACGACAAAA+TGG	-	chr3.4:67990149-67990168	MS.gene63430:intron	40.0%
	CAAACGAGGCTATAGTTACA+AGG	-	chr3.4:67990235-67990254	MS.gene63430:intron	40.0%
	CAGAAGAGAGTCACATTGTT+TGG	-	chr3.4:67990286-67990305	MS.gene63430:intron	40.0%
	CATACACAAACTGCATTGCA+AGG	+	chr3.4:67990119-67990138	None:intergenic	40.0%
	CTTGTAACTATAGCCTCGTT+TGG	+	chr3.4:67990237-67990256	None:intergenic	40.0%
	TGATAAGGACACATTCAGCT+TGG	-	chr3.4:67990137-67990156	MS.gene63430:intron	40.0%
	TGGAGTATGAGGATCTGAAA+TGG	+	chr3.4:67989506-67989525	None:intergenic	40.0%
	TTCAGCTTGGACGACAAAAT+GGG	-	chr3.4:67990150-67990169	MS.gene63430:intron	40.0%
!	GCTAAGCAATTTTGTCTGCT+AGG	+	chr3.4:67990267-67990286	None:intergenic	40.0%
!!	ACTAGATGGATTGGAGTATG+AGG	+	chr3.4:67989517-67989536	None:intergenic	40.0%
	GGTTGACATTCCTGGTTCAA+AGG	-	chr3.4:67990389-67990408	MS.gene63430:CDS	45.0%
	TCAGCTTGGACGACAAAATG+GGG	-	chr3.4:67990151-67990170	MS.gene63430:intron	45.0%
	TGAAGCAGTAAAGATGCGGT+TGG	-	chr3.4:67990203-67990222	MS.gene63430:intron	45.0%
	AAGTGGAACTCCAGTTGCAC+TGG	-	chr3.4:67990367-67990386	MS.gene63430:CDS	50.0%
	AGTGGAACTCCAGTTGCACT+GGG	-	chr3.4:67990368-67990387	MS.gene63430:CDS	50.0%
	CAGCTTGGACGACAAAATGG+GGG	-	chr3.4:67990152-67990171	MS.gene63430:intron	50.0%
	GAATGTCAACCCAGTGCAAC+TGG	+	chr3.4:67990380-67990399	None:intergenic	50.0%
	TCTAAATCCTGAGTGGGACG+AGG	-	chr3.4:67989468-67989487	MS.gene63430:CDS	50.0%
!	TTGCACTGGGTTGACATTCC+TGG	-	chr3.4:67990381-67990400	MS.gene63430:CDS	50.0%
	GCAGTAAAGATGCGGTTGGC+AGG	-	chr3.4:67990207-67990226	MS.gene63430:intron	55.0%
	GGGGACGCTGAGTTTGACAT+CGG	-	chr3.4:67990171-67990190	MS.gene63430:intron	55.0%
	GTCAAGTCCTCGTCCCACTC+AGG	+	chr3.4:67989478-67989497	None:intergenic	60.0%
	GTTGGCAGGTCTCCCAAACG+AGG	-	chr3.4:67990221-67990240	MS.gene63430:intron	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.4	gene	67989433	67990411	67989433	ID=MS.gene63430
chr3.4	mRNA	67989433	67990411	67989433	ID=MS.gene63430.t1;Parent=MS.gene63430
chr3.4	exon	67990310	67990411	67990310	ID=MS.gene63430.t1.exon1;Parent=MS.gene63430.t1
chr3.4	CDS	67990310	67990411	67990310	ID=cds.MS.gene63430.t1;Parent=MS.gene63430.t1
chr3.4	exon	67989433	67989715	67989433	ID=MS.gene63430.t1.exon2;Parent=MS.gene63430.t1
chr3.4	CDS	67989433	67989715	67989433	ID=cds.MS.gene63430.t1;Parent=MS.gene63430.t1

Gene Sequence

>MS.gene63430

ATGCAGAAGCTGAAGACCAGGGTAGTGAAAAAGAATCTAAATCCTGAGTGGGACGAGGACTTGACTTTATCCATTTCAGATCCTCATACTCCAATCCATCTAGTAAGTAACTTTTCTTTAAACGTTGTGTGTTTCAAATCAAAATTTTGGTTAAAAAGATAAATGAAAAATTTAGGTTAGTTAAAGATATGAAATTTTCTCGCTTTGGTTTGGCTATCTGTATTATCATGTTGTTATTGATGCATATCACTATTATCATATGACAGAAAACATGATAAGACTTTTCAATTGGTAGAAATTTGATCTGTATATGACAGAACACATCTTAAATCATACAAACACTACCTTATAGCGAAAATAAGTTATATTTTAGGGAGATCATGAACATTATCAAATATGGGGTTTGTTGAATTTAGAATTAGTTCAAGTTCTTACTTGGTCTGTCTCATATTATCCGCTGTTAAGGTAAAATACACGTCTTCAGAAAATAATTTACTCTATTTTTTTATGTAAATCAATTTTTTGACTATATTGTGCTTATTGTAATATGAATTTGGTGGAAGGACTAATTAGTGTATGATTGAGAAGATATAAAAAAATAAGAATATTGATGAAAAATTGTAATTAGTACTATCTGAATATTAAAAAATGGAAAATAATTTGAGACAATATTCTAAACATGACCTTGCAATGCAGTTTGTGTATGATAAGGACACATTCAGCTTGGACGACAAAATGGGGGACGCTGAGTTTGACATCGGCCCATTTTTTGAAGCAGTAAAGATGCGGTTGGCAGGTCTCCCAAACGAGGCTATAGTTACAAGGGTGCAACCTAGCAGACAAAATTGCTTAGCAGAAGAGAGTCACATTGTTTGGAAAGATGGTAAAATTTTCCAAAACATGGTTCTTAGACTAAGAAATGTTGAATGTGGGGAAGTGGAACTCCAGTTGCACTGGGTTGACATTCCTGGTTCAAAGG

Protein sequence

>MS.gene63430.t1

MQKLKTRVVKKNLNPEWDEDLTLSISDPHTPIHLFVYDKDTFSLDDKMGDAEFDIGPFFEAVKMRLAGLPNEAIVTRVQPSRQNCLAEESHIVWKDGKIFQNMVLRLRNVECGEVELQLHWVDIPGSK