Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34950.t1 | RHN42357.1 | 94.4 | 801 | 39 | 2 | 1 | 795 | 1 | 801 | 0.00E+00 | 1450.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34950.t1 | Q94B71 | 47.4 | 813 | 330 | 20 | 1 | 795 | 1 | 733 | 2.1e-167 | 590.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34950.t1 | A0A396GUR3 | 94.4 | 801 | 39 | 2 | 1 | 795 | 1 | 801 | 0.0e+00 | 1450.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene34950 | 0.861612 | 9.08E-64 | -1.69E-46 |
| MS.gene04918 | MS.gene34950 | 0.848166 | 7.29E-60 | -1.69E-46 |
| MS.gene04920 | MS.gene34950 | 0.813489 | 2.49E-51 | -1.69E-46 |
| MS.gene049254 | MS.gene34950 | 0.803403 | 3.55E-49 | -1.69E-46 |
| MS.gene049283 | MS.gene34950 | 0.833253 | 5.93E-56 | -1.69E-46 |
| MS.gene049350 | MS.gene34950 | 0.846265 | 2.42E-59 | -1.69E-46 |
| MS.gene049368 | MS.gene34950 | 0.862338 | 5.44E-64 | -1.69E-46 |
| MS.gene049499 | MS.gene34950 | 0.824362 | 8.41E-54 | -1.69E-46 |
| MS.gene049711 | MS.gene34950 | 0.843616 | 1.26E-58 | -1.69E-46 |
| MS.gene049807 | MS.gene34950 | 0.84704 | 1.49E-59 | -1.69E-46 |
| MS.gene049983 | MS.gene34950 | 0.835599 | 1.53E-56 | -1.69E-46 |
| MS.gene04998 | MS.gene34950 | 0.815498 | 8.97E-52 | -1.69E-46 |
| MS.gene050238 | MS.gene34950 | 0.804528 | 2.07E-49 | -1.69E-46 |
| MS.gene050359 | MS.gene34950 | 0.806244 | 9.04E-50 | -1.69E-46 |
| MS.gene050414 | MS.gene34950 | 0.843359 | 1.47E-58 | -1.69E-46 |
| MS.gene050551 | MS.gene34950 | 0.81422 | 1.72E-51 | -1.69E-46 |
| MS.gene050559 | MS.gene34950 | 0.817598 | 3.04E-52 | -1.69E-46 |
| MS.gene050561 | MS.gene34950 | 0.809651 | 1.70E-50 | -1.69E-46 |
| MS.gene050562 | MS.gene34950 | 0.807893 | 4.05E-50 | -1.69E-46 |
| MS.gene050646 | MS.gene34950 | 0.844769 | 6.16E-59 | -1.69E-46 |
| MS.gene050654 | MS.gene34950 | 0.831291 | 1.81E-55 | -1.69E-46 |
| MS.gene050689 | MS.gene34950 | 0.807489 | 4.93E-50 | -1.69E-46 |
| MS.gene050752 | MS.gene34950 | 0.807594 | 4.68E-50 | -1.69E-46 |
| MS.gene050838 | MS.gene34950 | 0.819229 | 1.30E-52 | -1.69E-46 |
| MS.gene050945 | MS.gene34950 | 0.807461 | 5.00E-50 | -1.69E-46 |
| MS.gene051003 | MS.gene34950 | 0.857149 | 1.99E-62 | -1.69E-46 |
| MS.gene051043 | MS.gene34950 | 0.844215 | 8.68E-59 | -1.69E-46 |
| MS.gene051234 | MS.gene34950 | 0.883319 | 4.96E-71 | -1.69E-46 |
| MS.gene051279 | MS.gene34950 | 0.819909 | 9.07E-53 | -1.69E-46 |
| MS.gene051343 | MS.gene34950 | 0.819194 | 1.32E-52 | -1.69E-46 |
| MS.gene051450 | MS.gene34950 | 0.807949 | 3.94E-50 | -1.69E-46 |
| MS.gene051676 | MS.gene34950 | 0.814574 | 1.44E-51 | -1.69E-46 |
| MS.gene051699 | MS.gene34950 | 0.811498 | 6.79E-51 | -1.69E-46 |
| MS.gene051720 | MS.gene34950 | 0.801704 | 7.94E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene34950 | 0.822059 | 2.90E-53 | -1.69E-46 |
| MS.gene051848 | MS.gene34950 | -0.816619 | 5.04E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene34950 | 0.832521 | 9.02E-56 | -1.69E-46 |
| MS.gene051975 | MS.gene34950 | 0.817822 | 2.70E-52 | -1.69E-46 |
| MS.gene052016 | MS.gene34950 | 0.864362 | 1.28E-64 | -1.69E-46 |
| MS.gene052052 | MS.gene34950 | 0.804839 | 1.78E-49 | -1.69E-46 |
| MS.gene052072 | MS.gene34950 | 0.833015 | 6.80E-56 | -1.69E-46 |
| MS.gene052118 | MS.gene34950 | 0.806807 | 6.87E-50 | -1.69E-46 |
| MS.gene052296 | MS.gene34950 | 0.81767 | 2.92E-52 | -1.69E-46 |
| MS.gene052307 | MS.gene34950 | 0.853641 | 2.09E-61 | -1.69E-46 |
| MS.gene052342 | MS.gene34950 | 0.802857 | 4.60E-49 | -1.69E-46 |
| MS.gene052463 | MS.gene34950 | 0.861463 | 1.01E-63 | -1.69E-46 |
| MS.gene052516 | MS.gene34950 | 0.81872 | 1.69E-52 | -1.69E-46 |
| MS.gene052518 | MS.gene34950 | 0.804891 | 1.74E-49 | -1.69E-46 |
| MS.gene052533 | MS.gene34950 | 0.870014 | 2.01E-66 | -1.69E-46 |
| MS.gene052609 | MS.gene34950 | 0.839786 | 1.29E-57 | -1.69E-46 |
| MS.gene052889 | MS.gene34950 | 0.807694 | 4.46E-50 | -1.69E-46 |
| MS.gene053079 | MS.gene34950 | 0.804811 | 1.81E-49 | -1.69E-46 |
| MS.gene053122 | MS.gene34950 | 0.804209 | 2.41E-49 | -1.69E-46 |
| MS.gene053143 | MS.gene34950 | 0.839711 | 1.35E-57 | -1.69E-46 |
| MS.gene053144 | MS.gene34950 | 0.800687 | 1.28E-48 | -1.69E-46 |
| MS.gene053226 | MS.gene34950 | 0.81577 | 7.80E-52 | -1.69E-46 |
| MS.gene053298 | MS.gene34950 | 0.804141 | 2.49E-49 | -1.69E-46 |
| MS.gene05350 | MS.gene34950 | 0.803828 | 2.89E-49 | -1.69E-46 |
| MS.gene05364 | MS.gene34950 | 0.808551 | 2.93E-50 | -1.69E-46 |
| MS.gene053931 | MS.gene34950 | 0.803804 | 2.93E-49 | -1.69E-46 |
| MS.gene054004 | MS.gene34950 | 0.815173 | 1.06E-51 | -1.69E-46 |
| MS.gene054142 | MS.gene34950 | 0.817093 | 3.94E-52 | -1.69E-46 |
| MS.gene054178 | MS.gene34950 | 0.862131 | 6.30E-64 | -1.69E-46 |
| MS.gene05423 | MS.gene34950 | 0.807742 | 4.36E-50 | -1.69E-46 |
| MS.gene054403 | MS.gene34950 | 0.811273 | 7.60E-51 | -1.69E-46 |
| MS.gene05458 | MS.gene34950 | 0.846285 | 2.39E-59 | -1.69E-46 |
| MS.gene054617 | MS.gene34950 | 0.822212 | 2.67E-53 | -1.69E-46 |
| MS.gene054651 | MS.gene34950 | 0.822701 | 2.06E-53 | -1.69E-46 |
| MS.gene054892 | MS.gene34950 | 0.8508 | 1.34E-60 | -1.69E-46 |
| MS.gene054893 | MS.gene34950 | 0.851705 | 7.46E-61 | -1.69E-46 |
| MS.gene055220 | MS.gene34950 | 0.817678 | 2.91E-52 | -1.69E-46 |
| MS.gene055221 | MS.gene34950 | 0.826158 | 3.16E-54 | -1.69E-46 |
| MS.gene055229 | MS.gene34950 | 0.822863 | 1.89E-53 | -1.69E-46 |
| MS.gene05539 | MS.gene34950 | 0.82763 | 1.41E-54 | -1.69E-46 |
| MS.gene055465 | MS.gene34950 | 0.822188 | 2.71E-53 | -1.69E-46 |
| MS.gene055466 | MS.gene34950 | 0.81266 | 3.79E-51 | -1.69E-46 |
| MS.gene055468 | MS.gene34950 | 0.819081 | 1.40E-52 | -1.69E-46 |
| MS.gene055513 | MS.gene34950 | 0.893679 | 5.02E-75 | -1.69E-46 |
| MS.gene05552 | MS.gene34950 | 0.82647 | 2.67E-54 | -1.69E-46 |
| MS.gene055580 | MS.gene34950 | -0.812567 | 3.97E-51 | -1.69E-46 |
| MS.gene055864 | MS.gene34950 | 0.826279 | 2.96E-54 | -1.69E-46 |
| MS.gene056043 | MS.gene34950 | -0.814211 | 1.73E-51 | -1.69E-46 |
| MS.gene056082 | MS.gene34950 | 0.805902 | 1.07E-49 | -1.69E-46 |
| MS.gene056181 | MS.gene34950 | 0.827179 | 1.80E-54 | -1.69E-46 |
| MS.gene056308 | MS.gene34950 | 0.828719 | 7.69E-55 | -1.69E-46 |
| MS.gene056390 | MS.gene34950 | 0.809582 | 1.76E-50 | -1.69E-46 |
| MS.gene056677 | MS.gene34950 | 0.817448 | 3.28E-52 | -1.69E-46 |
| MS.gene056699 | MS.gene34950 | 0.855568 | 5.78E-62 | -1.69E-46 |
| MS.gene05686 | MS.gene34950 | 0.837703 | 4.45E-57 | -1.69E-46 |
| MS.gene056986 | MS.gene34950 | 0.80438 | 2.22E-49 | -1.69E-46 |
| MS.gene057034 | MS.gene34950 | 0.823469 | 1.36E-53 | -1.69E-46 |
| MS.gene057102 | MS.gene34950 | 0.886881 | 2.33E-72 | -1.69E-46 |
| MS.gene057208 | MS.gene34950 | 0.806268 | 8.93E-50 | -1.69E-46 |
| MS.gene057294 | MS.gene34950 | 0.800978 | 1.12E-48 | -1.69E-46 |
| MS.gene058095 | MS.gene34950 | 0.867664 | 1.16E-65 | -1.69E-46 |
| MS.gene058149 | MS.gene34950 | 0.835363 | 1.75E-56 | -1.69E-46 |
| MS.gene058159 | MS.gene34950 | 0.843046 | 1.78E-58 | -1.69E-46 |
| MS.gene058279 | MS.gene34950 | 0.805584 | 1.24E-49 | -1.69E-46 |
| MS.gene058492 | MS.gene34950 | 0.814548 | 1.46E-51 | -1.69E-46 |
| MS.gene058668 | MS.gene34950 | 0.825356 | 4.90E-54 | -1.69E-46 |
| MS.gene058781 | MS.gene34950 | 0.809707 | 1.66E-50 | -1.69E-46 |
| MS.gene059144 | MS.gene34950 | 0.807629 | 4.60E-50 | -1.69E-46 |
| MS.gene059146 | MS.gene34950 | 0.824822 | 6.55E-54 | -1.69E-46 |
| MS.gene059170 | MS.gene34950 | 0.859545 | 3.84E-63 | -1.69E-46 |
| MS.gene059227 | MS.gene34950 | 0.818869 | 1.57E-52 | -1.69E-46 |
| MS.gene05952 | MS.gene34950 | 0.825382 | 4.83E-54 | -1.69E-46 |
| MS.gene059774 | MS.gene34950 | 0.828781 | 7.43E-55 | -1.69E-46 |
| MS.gene059778 | MS.gene34950 | 0.857013 | 2.18E-62 | -1.69E-46 |
| MS.gene05985 | MS.gene34950 | -0.877173 | 7.77E-69 | -1.69E-46 |
| MS.gene059900 | MS.gene34950 | -0.803209 | 3.89E-49 | -1.69E-46 |
| MS.gene059901 | MS.gene34950 | -0.854597 | 1.11E-61 | -1.69E-46 |
| MS.gene059965 | MS.gene34950 | 0.827788 | 1.29E-54 | -1.69E-46 |
| MS.gene060259 | MS.gene34950 | 0.812301 | 4.54E-51 | -1.69E-46 |
| MS.gene060343 | MS.gene34950 | -0.801579 | 8.42E-49 | -1.69E-46 |
| MS.gene060435 | MS.gene34950 | 0.832351 | 9.93E-56 | -1.69E-46 |
| MS.gene060512 | MS.gene34950 | 0.803028 | 4.24E-49 | -1.69E-46 |
| MS.gene060522 | MS.gene34950 | 0.805978 | 1.03E-49 | -1.69E-46 |
| MS.gene060525 | MS.gene34950 | 0.809851 | 1.54E-50 | -1.69E-46 |
| MS.gene060697 | MS.gene34950 | 0.824297 | 8.71E-54 | -1.69E-46 |
| MS.gene060763 | MS.gene34950 | 0.821337 | 4.26E-53 | -1.69E-46 |
| MS.gene060777 | MS.gene34950 | 0.807646 | 4.57E-50 | -1.69E-46 |
| MS.gene060932 | MS.gene34950 | 0.831886 | 1.29E-55 | -1.69E-46 |
| MS.gene060933 | MS.gene34950 | 0.834669 | 2.62E-56 | -1.69E-46 |
| MS.gene060935 | MS.gene34950 | 0.83841 | 2.92E-57 | -1.69E-46 |
| MS.gene060937 | MS.gene34950 | 0.855268 | 7.07E-62 | -1.69E-46 |
| MS.gene061100 | MS.gene34950 | 0.906725 | 1.09E-80 | -1.69E-46 |
| MS.gene061160 | MS.gene34950 | 0.823169 | 1.60E-53 | -1.69E-46 |
| MS.gene061188 | MS.gene34950 | 0.851804 | 6.99E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34950.t1 | MTR_4g039650 | 36.506 | 704 | 364 | 16 | 143 | 791 | 556 | 1231 | 5.92e-121 | 394 |
| MS.gene34950.t1 | MTR_5g097360 | 37.639 | 449 | 264 | 7 | 328 | 765 | 79 | 522 | 6.49e-91 | 297 |
| MS.gene34950.t1 | MTR_3g045740 | 70.000 | 80 | 24 | 0 | 347 | 426 | 58 | 137 | 8.21e-28 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34950.t1 | AT1G14740 | 51.523 | 821 | 284 | 26 | 1 | 795 | 1 | 733 | 0.0 | 702 |
| MS.gene34950.t1 | AT3G63500 | 35.982 | 667 | 352 | 19 | 171 | 792 | 247 | 883 | 3.51e-110 | 357 |
| MS.gene34950.t1 | AT3G63500 | 35.982 | 667 | 352 | 19 | 171 | 792 | 522 | 1158 | 4.95e-108 | 357 |
| MS.gene34950.t1 | AT3G63500 | 35.982 | 667 | 352 | 19 | 171 | 792 | 522 | 1158 | 4.95e-108 | 357 |
| MS.gene34950.t1 | AT5G48160 | 39.101 | 445 | 247 | 8 | 337 | 767 | 93 | 527 | 1.49e-89 | 293 |
| MS.gene34950.t1 | AT5G48160 | 39.101 | 445 | 247 | 8 | 337 | 767 | 93 | 527 | 1.49e-89 | 293 |
| MS.gene34950.t1 | AT3G07780 | 38.530 | 449 | 248 | 9 | 328 | 760 | 82 | 518 | 4.09e-86 | 284 |
| MS.gene34950.t1 | AT3G07780 | 38.530 | 449 | 248 | 9 | 328 | 760 | 82 | 518 | 4.09e-86 | 284 |
| MS.gene34950.t1 | AT3G07780 | 38.530 | 449 | 248 | 9 | 328 | 760 | 93 | 529 | 9.89e-86 | 283 |
Find 189 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGGGTCCAACCAGGTTTC+TGG | 0.125739 | 4.4:+17699966 | MS.gene34950:CDS |
| GGATTGTTAGGGAAATTATT+TGG | 0.126528 | 4.4:+17700816 | MS.gene34950:CDS |
| ACGTTTGTTTGGATCAAAAT+TGG | 0.188283 | 4.4:-17699889 | None:intergenic |
| CGGGTTTGATGAGCTTCTTC+TGG | 0.192598 | 4.4:-17701306 | None:intergenic |
| TGTATTGAAGAACTAGATTT+TGG | 0.193389 | 4.4:-17702931 | None:intergenic |
| CCTTGAATCTCTTTCAATCT+TGG | 0.204571 | 4.4:-17700038 | None:intergenic |
| GGAAAACATGGCAAACTTTC+CGG | 0.213766 | 4.4:+17702840 | MS.gene34950:CDS |
| CTGAAAGAGAGAGTAATATT+AGG | 0.226791 | 4.4:+17700192 | MS.gene34950:CDS |
| CAAATCAAGATGGAGGAAAA+TGG | 0.235949 | 4.4:+17700111 | MS.gene34950:CDS |
| CATAGGTTTGAGACTCATTC+AGG | 0.239156 | 4.4:+17700707 | MS.gene34950:CDS |
| CGAGTAAAGACGATCAAATT+TGG | 0.254395 | 4.4:+17700495 | MS.gene34950:CDS |
| CTTGAATCTCTTTCAATCTT+GGG | 0.262464 | 4.4:-17700037 | None:intergenic |
| CAAAGGTGGAATTGAAAGTT+TGG | 0.262902 | 4.4:+17703083 | MS.gene34950:CDS |
| GTTGACTAATTCGTCTTTCT+TGG | 0.266243 | 4.4:-17700930 | None:intergenic |
| GGTAGCCTTGATGTCTTCTT+TGG | 0.277127 | 4.4:-17703007 | None:intergenic |
| TTCTCTCAAGCCTGCTTTGA+AGG | 0.277570 | 4.4:-17700952 | None:intergenic |
| TCTTTGTCCTGATCATCTTC+TGG | 0.278880 | 4.4:-17703188 | None:intergenic |
| GGGTCTTGATAACTTACTTC+TGG | 0.293426 | 4.4:-17699868 | None:intergenic |
| GTTTAGCTGGTGGTGGAAAT+AGG | 0.304049 | 4.4:+17700774 | MS.gene34950:CDS |
| CAAAACCAGAGAGGATTGTT+AGG | 0.305807 | 4.4:+17700804 | MS.gene34950:CDS |
| TTGCTTCATCTGCCTTGGTT+TGG | 0.325105 | 4.4:-17703146 | None:intergenic |
| AACAGGAAGCAAACTCTTGC+AGG | 0.328838 | 4.4:-17701131 | None:intergenic |
| GGAAACGCAGAGGAGGAAAT+TGG | 0.331271 | 4.4:+17703272 | MS.gene34950:CDS |
| GATTGTTAGGGAAATTATTT+GGG | 0.334809 | 4.4:+17700817 | MS.gene34950:CDS |
| GAAATACAGTTTCATTGTAT+TGG | 0.337353 | 4.4:+17701361 | MS.gene34950:CDS |
| TCATCTGGGTAACGTTTGTT+TGG | 0.346007 | 4.4:-17699900 | None:intergenic |
| GGAGAGCATTGTTCGGATAA+AGG | 0.349420 | 4.4:+17703104 | MS.gene34950:CDS |
| TCTCACTTGGCCATGATTGC+TGG | 0.349920 | 4.4:+17699801 | None:intergenic |
| AAAGGGTACTAAAGTTCAAT+TGG | 0.350020 | 4.4:+17701003 | MS.gene34950:CDS |
| TCAAAAGGGTAAAGAGGTTA+TGG | 0.350376 | 4.4:+17700076 | MS.gene34950:CDS |
| TGATGGTTTGTTGGCGAGAA+TGG | 0.357589 | 4.4:+17703365 | MS.gene34950:CDS |
| GCCTTGATGTCTTCTTTGGA+TGG | 0.364546 | 4.4:-17703003 | None:intergenic |
| CCTCCTTGCTTCATCTGCCT+TGG | 0.368229 | 4.4:-17703151 | None:intergenic |
| CAGACACTGGATCTTTCTCT+TGG | 0.372476 | 4.4:+17700233 | MS.gene34950:CDS |
| CATGTCTTGTGCAAAGGATT+GGG | 0.372506 | 4.4:+17701429 | MS.gene34950:CDS |
| CTAACACCAGTTCCATTTCC+AGG | 0.389427 | 4.4:-17700596 | None:intergenic |
| GAAGAAATTCTGAGAGTTTG+AGG | 0.392536 | 4.4:+17700741 | MS.gene34950:CDS |
| AGATCCAGTGTCTGAACCTT+TGG | 0.396783 | 4.4:-17700224 | None:intergenic |
| CAATCAAAGTTCAAACAAAT+AGG | 0.398951 | 4.4:-17701214 | None:intergenic |
| TGAAAGAGAGAGTAATATTA+GGG | 0.403143 | 4.4:+17700193 | MS.gene34950:CDS |
| CATTGGTGCCATGCTGTTTG+TGG | 0.409509 | 4.4:+17701280 | MS.gene34950:CDS |
| CGTTTGTTTGGATCAAAATT+GGG | 0.410561 | 4.4:-17699888 | None:intergenic |
| TCATGTCTTGTGCAAAGGAT+TGG | 0.416223 | 4.4:+17701428 | MS.gene34950:CDS |
| CAGCGTGTCCTTTGGAAGGC+TGG | 0.422697 | 4.4:-17702902 | None:intergenic |
| AAAATGCAAGATGAAATTGA+TGG | 0.424314 | 4.4:+17703348 | MS.gene34950:CDS |
| AAATTGCATGATCTGATTGC+AGG | 0.425913 | 4.4:-17701593 | None:intergenic |
| AGGTCCTTTCAAGCTCGGTC+CGG | 0.426963 | 4.4:-17701326 | None:intergenic |
| CATAGCAGGTTTAAGCCAAT+TGG | 0.429977 | 4.4:+17700548 | MS.gene34950:CDS |
| CCTTGATGTCTTCTTTGGAT+GGG | 0.432069 | 4.4:-17703002 | None:intergenic |
| GTCTTCTTTGGATGGGGCAC+CGG | 0.435369 | 4.4:-17702995 | None:intergenic |
| TGGTGATGGTATTGTTGCTT+TGG | 0.436883 | 4.4:+17700568 | MS.gene34950:CDS |
| GGAAGAGACAGCGTGTCCTT+TGG | 0.438392 | 4.4:-17702910 | None:intergenic |
| TCCGACATGGGTGGTATTGG+TGG | 0.438973 | 4.4:+17699948 | MS.gene34950:CDS |
| TGAAAGCTTTCTGAGTCAAA+AGG | 0.442484 | 4.4:+17700061 | MS.gene34950:CDS |
| GTGCAAGTAATACTTGTAGT+TGG | 0.443206 | 4.4:+17701236 | MS.gene34950:CDS |
| GAACATGCATCGGAAATGTT+TGG | 0.443604 | 4.4:+17701388 | MS.gene34950:CDS |
| GCTTTGGCAAATCCTGGAAA+TGG | 0.447587 | 4.4:+17700584 | MS.gene34950:CDS |
| TTTGAAGGTTTAGCTGGTGG+TGG | 0.448117 | 4.4:+17700767 | MS.gene34950:CDS |
| CCGAGCTTGAAAGGACCTTC+TGG | 0.449486 | 4.4:+17701331 | MS.gene34950:CDS |
| AAATCAAGATGGAGGAAAAT+GGG | 0.449888 | 4.4:+17700112 | MS.gene34950:CDS |
| TATTCTACTAGGCCACATTC+CGG | 0.450993 | 4.4:+17702976 | MS.gene34950:CDS |
| ACCCTTTGAAAGTGTCTCCT+TGG | 0.451962 | 4.4:-17700987 | None:intergenic |
| CTTGATGTCTTCTTTGGATG+GGG | 0.454272 | 4.4:-17703001 | None:intergenic |
| GATTCCGACATGGGTGGTAT+TGG | 0.455133 | 4.4:+17699945 | MS.gene34950:CDS |
| AACTGTGGTGAAGGTACTAA+TGG | 0.457321 | 4.4:+17700518 | MS.gene34950:CDS |
| AGACTCATTCAGGGGATTCA+AGG | 0.459390 | 4.4:+17700717 | MS.gene34950:CDS |
| ATTTCCCTAACAATCCTCTC+TGG | 0.459574 | 4.4:-17700809 | None:intergenic |
| TGGAGGCAACAAAGCAGCAT+TGG | 0.463387 | 4.4:+17703385 | MS.gene34950:CDS |
| CTTTGGAAGGCTGGCTTGAG+AGG | 0.464312 | 4.4:-17702893 | None:intergenic |
| GGAGGCAACAAAGCAGCATT+GGG | 0.465244 | 4.4:+17703386 | MS.gene34950:CDS |
| CAGGTTTCTGGTGGTAACTC+AGG | 0.465258 | 4.4:+17699978 | MS.gene34950:CDS |
| CTGAATTGCCTGCTAGACAT+AGG | 0.465919 | 4.4:+17700690 | MS.gene34950:CDS |
| TTTCCTCCTCTGCGTTTCCT+CGG | 0.466448 | 4.4:-17703268 | None:intergenic |
| ATTGTTGCTTTGGCAAATCC+TGG | 0.468736 | 4.4:+17700578 | MS.gene34950:CDS |
| AAAACCAGAGAGGATTGTTA+GGG | 0.469024 | 4.4:+17700805 | MS.gene34950:CDS |
| AAGGGTTCCAGAAGATGATC+AGG | 0.477139 | 4.4:+17703181 | MS.gene34950:CDS |
| AGATGAAATTGATGGTTTGT+TGG | 0.477510 | 4.4:+17703356 | MS.gene34950:CDS |
| CCAAGATTGAAAGAGATTCA+AGG | 0.478614 | 4.4:+17700038 | MS.gene34950:CDS |
| CTAATGGCTCTGTGCATAGC+AGG | 0.484571 | 4.4:+17700534 | MS.gene34950:CDS |
| GGTCCTTTCAAGCTCGGTCC+GGG | 0.484591 | 4.4:-17701325 | None:intergenic |
| TGATGACGATCTTCAATTAG+CGG | 0.485492 | 4.4:+17703050 | MS.gene34950:CDS |
| TTACAGTCACAATCATCAAC+AGG | 0.485873 | 4.4:-17701148 | None:intergenic |
| TGGTATTGGTGGGTCCAACC+AGG | 0.485971 | 4.4:+17699959 | MS.gene34950:CDS |
| AAGATCTTTACCAGCAATCA+TGG | 0.490097 | 4.4:-17699811 | None:intergenic |
| TTCTTTAACTCGTAATTCAA+CGG | 0.493120 | 4.4:+17700454 | MS.gene34950:CDS |
| AAACCCGGACCGAGCTTGAA+AGG | 0.495513 | 4.4:+17701322 | MS.gene34950:CDS |
| AGTAATACTTGTAGTTGGAT+TGG | 0.496287 | 4.4:+17701241 | MS.gene34950:CDS |
| TCTGAGTCAAAAGGGTAAAG+AGG | 0.498142 | 4.4:+17700070 | MS.gene34950:CDS |
| AAAGTTTGGAGAGCATTGTT+CGG | 0.498175 | 4.4:+17703097 | MS.gene34950:CDS |
| AAGAAATTCTGAGAGTTTGA+GGG | 0.499273 | 4.4:+17700742 | MS.gene34950:CDS |
| GCAAATCCTGGAAATGGAAC+TGG | 0.502590 | 4.4:+17700590 | MS.gene34950:CDS |
| GCAACAATACCATCACCAAT+TGG | 0.506827 | 4.4:-17700563 | None:intergenic |
| TTATAATGACTACTATTACC+TGG | 0.509349 | 4.4:-17700632 | None:intergenic |
| GTCTCAAACCTATGTCTAGC+AGG | 0.510746 | 4.4:-17700698 | None:intergenic |
| TATGAAGTATGAGTAGTTGA+AGG | 0.513074 | 4.4:-17700347 | None:intergenic |
| ATGAGTCGAGCTATTCTACT+AGG | 0.513430 | 4.4:+17702965 | MS.gene34950:CDS |
| AAAGCCATTTGAAAATGAAA+AGG | 0.513640 | 4.4:-17700414 | None:intergenic |
| TCAGTTATCTGAGTTGGTAG+AGG | 0.514462 | 4.4:+17701078 | MS.gene34950:CDS |
| GTAAGAGAAAGAGAAACATC+AGG | 0.514471 | 4.4:-17700260 | None:intergenic |
| TAATCTTCAGTTATCTGAGT+TGG | 0.514763 | 4.4:+17701072 | MS.gene34950:CDS |
| GAAAGCTTTCTGAGTCAAAA+GGG | 0.515440 | 4.4:+17700062 | MS.gene34950:CDS |
| AAGATTACCGTACAAGAAGC+TGG | 0.518720 | 4.4:-17701056 | None:intergenic |
| CAGGACAAAGACTGCACAGA+TGG | 0.518929 | 4.4:+17703200 | MS.gene34950:CDS |
| GACTCATTCAGGGGATTCAA+GGG | 0.521327 | 4.4:+17700718 | MS.gene34950:CDS |
| GGTTTCCACATAGATAACTC+AGG | 0.521637 | 4.4:-17700016 | None:intergenic |
| ATGTCTTGTGCAAAGGATTG+GGG | 0.521792 | 4.4:+17701430 | MS.gene34950:CDS |
| ATCTGATTGCAGGCTTCTGA+AGG | 0.522424 | 4.4:-17701583 | None:intergenic |
| TCCAAGGAGACACTTTCAAA+GGG | 0.522668 | 4.4:+17700986 | MS.gene34950:CDS |
| CGTTGATGTCACAACTTCCT+CGG | 0.522739 | 4.4:-17700879 | None:intergenic |
| AGATTTGCTCGGGAAACAAA+GGG | 0.525514 | 4.4:+17701170 | MS.gene34950:CDS |
| CTGAGTTACCACCAGAAACC+TGG | 0.530099 | 4.4:-17699977 | None:intergenic |
| TTGGATGGGGCACCGGAATG+TGG | 0.530269 | 4.4:-17702988 | None:intergenic |
| TTCCAAGGAGACACTTTCAA+AGG | 0.532886 | 4.4:+17700985 | MS.gene34950:CDS |
| TGAGTAGTTGAAGGCCTGCT+AGG | 0.537933 | 4.4:-17700338 | None:intergenic |
| TCTGAGAATTCAAATCAAGA+TGG | 0.538512 | 4.4:+17700101 | MS.gene34950:CDS |
| AATTAGTCAACCTTCAAAGC+AGG | 0.538657 | 4.4:+17700942 | MS.gene34950:CDS |
| GAAGCAAGGAGGGCGGCAGA+AGG | 0.540304 | 4.4:+17703162 | MS.gene34950:CDS |
| AGGTTTAAGCCAATTGGTGA+TGG | 0.542946 | 4.4:+17700554 | MS.gene34950:CDS |
| CCAGAAGGTCCTTTCAAGCT+CGG | 0.542946 | 4.4:-17701331 | None:intergenic |
| TTTGAAGAGAAAACAGAAGC+CGG | 0.545580 | 4.4:-17702859 | None:intergenic |
| CTGTTAGAGTAAAACCTAGC+AGG | 0.549424 | 4.4:+17700324 | MS.gene34950:CDS |
| GAGCTGCATTTGAAAACTGA+TGG | 0.552123 | 4.4:+17701526 | MS.gene34950:CDS |
| CAAATTTGGAACTGTGGTGA+AGG | 0.554406 | 4.4:+17700509 | MS.gene34950:CDS |
| CAGAAGAAGCTCATCAAACC+CGG | 0.558334 | 4.4:+17701307 | MS.gene34950:CDS |
| GGCAGATGAAGCAAGGAGGG+CGG | 0.561217 | 4.4:+17703155 | MS.gene34950:CDS |
| AAGATTTGCTCGGGAAACAA+AGG | 0.561700 | 4.4:+17701169 | MS.gene34950:CDS |
| TTTCTGAGAGATTCCGACAT+GGG | 0.564131 | 4.4:+17699936 | MS.gene34950:CDS |
| TTACGAGTTAAAGAACAACT+TGG | 0.566899 | 4.4:-17700446 | None:intergenic |
| TGTGACTGTAAGATTTGCTC+GGG | 0.566967 | 4.4:+17701160 | MS.gene34950:CDS |
| ATGAATAGATGCGGAAAACA+TGG | 0.567045 | 4.4:+17702828 | MS.gene34950:intron |
| CAAGGCAGATGAAGCAAGGA+GGG | 0.567736 | 4.4:+17703152 | MS.gene34950:CDS |
| TTCAAAGCAGGCTTGAGAGA+AGG | 0.571954 | 4.4:+17700954 | MS.gene34950:CDS |
| GTTAGTTCATTTATGCAACC+AGG | 0.577258 | 4.4:+17700614 | MS.gene34950:CDS |
| GCTGGTAAAGATCTTCGTAA+TGG | 0.577310 | 4.4:+17699819 | MS.gene34950:CDS |
| GACGATCAAATTTGGAACTG+TGG | 0.579357 | 4.4:+17700503 | MS.gene34950:CDS |
| TGGGAAGTGAGGATCGCAAA+GGG | 0.580002 | 4.4:+17701500 | MS.gene34950:CDS |
| CCCATCCAAAGAAGACATCA+AGG | 0.582862 | 4.4:+17703002 | MS.gene34950:CDS |
| GAGACCAAAGGTTCAGACAC+TGG | 0.583046 | 4.4:+17700220 | MS.gene34950:CDS |
| GAAAGGACCTTCTGGTACCA+CGG | 0.584387 | 4.4:+17701339 | MS.gene34950:CDS |
| GAAATTGGATGAAATGAAAG+TGG | 0.585716 | 4.4:+17703287 | MS.gene34950:CDS |
| GGGTCCAACCAGGTTTCTGG+TGG | 0.586519 | 4.4:+17699969 | MS.gene34950:CDS |
| GAGACAGCGTGTCCTTTGGA+AGG | 0.588812 | 4.4:-17702906 | None:intergenic |
| GGACTGTCCAGCTTCTTGTA+CGG | 0.589156 | 4.4:+17701049 | MS.gene34950:CDS |
| CTCTCAAGCCAGCCTTCCAA+AGG | 0.589453 | 4.4:+17702894 | MS.gene34950:CDS |
| ATAGGTTTGAGACTCATTCA+GGG | 0.591379 | 4.4:+17700708 | MS.gene34950:CDS |
| AAGCAAGGAGGGCGGCAGAA+GGG | 0.593219 | 4.4:+17703163 | MS.gene34950:CDS |
| CCGACATGGGTGGTATTGGT+GGG | 0.593598 | 4.4:+17699949 | MS.gene34950:CDS |
| TTGTGACTGTAAGATTTGCT+CGG | 0.596225 | 4.4:+17701159 | MS.gene34950:CDS |
| GAGAAGGTCTGATCTTTCCA+AGG | 0.598294 | 4.4:+17700970 | MS.gene34950:CDS |
| GACAATTCAGGAGCTTGCCG+AGG | 0.600101 | 4.4:+17700862 | MS.gene34950:CDS |
| TGTCTAGCAGGCAATTCAGA+AGG | 0.601429 | 4.4:-17700686 | None:intergenic |
| ACAATCAAGCTCTTTCAACA+AGG | 0.601694 | 4.4:-17701461 | None:intergenic |
| AGCGAAAATGTTCCAAACCA+AGG | 0.602262 | 4.4:+17703134 | MS.gene34950:CDS |
| GATGTGATGTTTGTTCACAT+TGG | 0.603032 | 4.4:+17701263 | MS.gene34950:CDS |
| AGAAATTCTGAGAGTTTGAG+GGG | 0.603264 | 4.4:+17700743 | MS.gene34950:CDS |
| GAGAATTCAAATCAAGATGG+AGG | 0.603346 | 4.4:+17700104 | MS.gene34950:CDS |
| AAACCAAGGCAGATGAAGCA+AGG | 0.604039 | 4.4:+17703148 | MS.gene34950:CDS |
| AAGTGAGGATCGCAAAGGGA+AGG | 0.605051 | 4.4:+17701504 | MS.gene34950:CDS |
| CTGAGAGATTCCGACATGGG+TGG | 0.605479 | 4.4:+17699939 | MS.gene34950:CDS |
| TTAGCGGCTTTACTAAGCAA+AGG | 0.606428 | 4.4:+17703066 | MS.gene34950:CDS |
| CCCACCAATACCACCCATGT+CGG | 0.609710 | 4.4:-17699949 | None:intergenic |
| TGTGTTCATGTCTTGTGCAA+AGG | 0.616913 | 4.4:+17701423 | MS.gene34950:CDS |
| GCGGCTTTACTAAGCAAAGG+TGG | 0.624078 | 4.4:+17703069 | MS.gene34950:CDS |
| AATGGTGTTGCTGATTCTGA+TGG | 0.626641 | 4.4:+17699837 | MS.gene34950:CDS |
| TGTCTTGTGCAAAGGATTGG+GGG | 0.628635 | 4.4:+17701431 | MS.gene34950:CDS |
| TATTGGATGTGAACATGCAT+CGG | 0.629214 | 4.4:+17701378 | MS.gene34950:CDS |
| TTAGAATAAGAATGAGACAA+AGG | 0.633322 | 4.4:-17700389 | None:intergenic |
| AAGAGCTTGATTGTGTGAGG+AGG | 0.633626 | 4.4:+17701470 | MS.gene34950:CDS |
| ACAATGAAACTGTATTTCCG+TGG | 0.634167 | 4.4:-17701356 | None:intergenic |
| TGTATTTCCGTGGTACCAGA+AGG | 0.636444 | 4.4:-17701346 | None:intergenic |
| GTTTCCACATAGATAACTCA+GGG | 0.638114 | 4.4:-17700015 | None:intergenic |
| TAGGTTTGAGACTCATTCAG+GGG | 0.639490 | 4.4:+17700709 | MS.gene34950:CDS |
| TGAAAGAGCTTGATTGTGTG+AGG | 0.645254 | 4.4:+17701467 | MS.gene34950:CDS |
| ATTGGATGAAATGAAAGTGG+TGG | 0.645371 | 4.4:+17703290 | MS.gene34950:CDS |
| TCTGGATGCCACAAACAGCA+TGG | 0.649091 | 4.4:-17701288 | None:intergenic |
| ATACCGAGGAAACGCAGAGG+AGG | 0.654221 | 4.4:+17703265 | MS.gene34950:CDS |
| TATTAGGGATAAGAGACCAA+AGG | 0.659782 | 4.4:+17700208 | MS.gene34950:CDS |
| ATGGGAAGTGAGGATCGCAA+AGG | 0.660662 | 4.4:+17701499 | MS.gene34950:CDS |
| CCAAGGCAGATGAAGCAAGG+AGG | 0.661271 | 4.4:+17703151 | MS.gene34950:CDS |
| TTGACCCTGAGTTATCTATG+TGG | 0.661402 | 4.4:+17700011 | MS.gene34950:CDS |
| GTTACCACCAGAAACCTGGT+TGG | 0.662098 | 4.4:-17699973 | None:intergenic |
| TGGTTTGTTGGCGAGAATGG+AGG | 0.674598 | 4.4:+17703368 | MS.gene34950:CDS |
| ACTCATTCAGGGGATTCAAG+GGG | 0.678667 | 4.4:+17700719 | MS.gene34950:CDS |
| GGAATCTTTCAAAACCAGAG+AGG | 0.683101 | 4.4:+17700795 | MS.gene34950:CDS |
| GGAAGTTGTGACATCAACGA+AGG | 0.692302 | 4.4:+17700883 | MS.gene34950:CDS |
| ACTCTGTCTGAATGATACCG+AGG | 0.693322 | 4.4:+17703251 | MS.gene34950:CDS |
| AATTTGATCGTCTTTACTCG+CGG | 0.693340 | 4.4:-17700492 | None:intergenic |
| GAGCATTGTTCGGATAAAGG+AGG | 0.695694 | 4.4:+17703107 | MS.gene34950:CDS |
| ATGATACCGAGGAAACGCAG+AGG | 0.740426 | 4.4:+17703262 | MS.gene34950:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAATTTAAAGTAATTGTTTT+TGG | + | chr4.4:17702358-17702377 | MS.gene34950:intron | 15.0% |
| !! | AGCTTCAATATTAAATTTGT+TGG | + | chr4.4:17702259-17702278 | MS.gene34950:intron | 20.0% |
| !! | TAGATATCAGATATGATTAT+AGG | - | chr4.4:17702785-17702804 | None:intergenic | 20.0% |
| !! | TGAATTGTCAATGAAAAAAT+AGG | - | chr4.4:17700851-17700870 | None:intergenic | 20.0% |
| !! | TGTTAATTGAATTTAGTGTT+TGG | + | chr4.4:17701894-17701913 | MS.gene34950:intron | 20.0% |
| !! | TTGAATATTTATGCCTAATA+TGG | + | chr4.4:17702425-17702444 | MS.gene34950:intron | 20.0% |
| !!! | TATTTTTTCATTGACAATTC+AGG | + | chr4.4:17700850-17700869 | MS.gene34950:CDS | 20.0% |
| !!! | TTTTTAAGACAAGAAATTCA+GGG | + | chr4.4:17701983-17702002 | MS.gene34950:intron | 20.0% |
| !!! | TTTTTTAAGACAAGAAATTC+AGG | + | chr4.4:17701982-17702001 | MS.gene34950:intron | 20.0% |
| ! | AAAATGCAAGATGAAATTGA+TGG | + | chr4.4:17703348-17703367 | MS.gene34950:CDS | 25.0% |
| ! | AAAGCCATTTGAAAATGAAA+AGG | - | chr4.4:17700417-17700436 | None:intergenic | 25.0% |
| ! | ATTCAGAAGGAAAAAAAGAA+TGG | - | chr4.4:17700676-17700695 | None:intergenic | 25.0% |
| ! | ATTGTCAATCAAACAAATTG+AGG | - | chr4.4:17702202-17702221 | None:intergenic | 25.0% |
| ! | ATTTATGCCTAATATGGTAT+GGG | + | chr4.4:17702431-17702450 | MS.gene34950:intron | 25.0% |
| ! | CAAAAGCAAATCTATTTGAA+TGG | + | chr4.4:17702134-17702153 | MS.gene34950:intron | 25.0% |
| ! | CAATCAAAGTTCAAACAAAT+AGG | - | chr4.4:17701217-17701236 | None:intergenic | 25.0% |
| ! | GAAAAAATCAAACAATGATG+AGG | + | chr4.4:17701927-17701946 | MS.gene34950:intron | 25.0% |
| ! | GAAATACAGTTTCATTGTAT+TGG | + | chr4.4:17701361-17701380 | MS.gene34950:CDS | 25.0% |
| ! | GATTGTTAGGGAAATTATTT+GGG | + | chr4.4:17700817-17700836 | MS.gene34950:CDS | 25.0% |
| ! | TATTTATGCCTAATATGGTA+TGG | + | chr4.4:17702430-17702449 | MS.gene34950:intron | 25.0% |
| ! | TGAAAGAGAGAGTAATATTA+GGG | + | chr4.4:17700193-17700212 | MS.gene34950:CDS | 25.0% |
| ! | TTAGAATAAGAATGAGACAA+AGG | - | chr4.4:17700392-17700411 | None:intergenic | 25.0% |
| ! | TTATAATGACTACTATTACC+TGG | - | chr4.4:17700635-17700654 | None:intergenic | 25.0% |
| ! | TTCTTTAACTCGTAATTCAA+CGG | + | chr4.4:17700454-17700473 | MS.gene34950:CDS | 25.0% |
| ! | TTGTCTTAAAAAAACATTGC+TGG | - | chr4.4:17701975-17701994 | None:intergenic | 25.0% |
| !! | ATTTTTCTGATGAATAGATG+CGG | + | chr4.4:17702819-17702838 | MS.gene34950:intron | 25.0% |
| !! | TGTATTGAAGAACTAGATTT+TGG | - | chr4.4:17702934-17702953 | None:intergenic | 25.0% |
| !!! | ATTTTTATTTCAGCAATGAC+TGG | - | chr4.4:17701834-17701853 | None:intergenic | 25.0% |
| !!! | ATTTTTTAGTTCGCTAAAGA+TGG | - | chr4.4:17703031-17703050 | None:intergenic | 25.0% |
| AAAACATTGCTGGAAAACTT+TGG | - | chr4.4:17701965-17701984 | None:intergenic | 30.0% | |
| AAATCAAACAATGATGAGGA+TGG | + | chr4.4:17701931-17701950 | MS.gene34950:intron | 30.0% | |
| AAATCAAGATGGAGGAAAAT+GGG | + | chr4.4:17700112-17700131 | MS.gene34950:CDS | 30.0% | |
| AAATGCAAAATACCATTGCT+AGG | - | chr4.4:17702489-17702508 | None:intergenic | 30.0% | |
| ACGTTTGTTTGGATCAAAAT+TGG | - | chr4.4:17699892-17699911 | None:intergenic | 30.0% | |
| AGTAATACTTGTAGTTGGAT+TGG | + | chr4.4:17701241-17701260 | MS.gene34950:CDS | 30.0% | |
| AGTGGGATTATAAGCATATT+TGG | + | chr4.4:17702041-17702060 | MS.gene34950:intron | 30.0% | |
| AGTTACATCAACACATTCAA+CGG | - | chr4.4:17702627-17702646 | None:intergenic | 30.0% | |
| AGTTAGTAGGATTGTGAATA+GGG | + | chr4.4:17701704-17701723 | MS.gene34950:intron | 30.0% | |
| ATATTGAAGCTGAATACTGT+AGG | - | chr4.4:17702250-17702269 | None:intergenic | 30.0% | |
| CAAATAACAGACAATTCAGA+AGG | + | chr4.4:17701858-17701877 | MS.gene34950:intron | 30.0% | |
| CGTTTGTTTGGATCAAAATT+GGG | - | chr4.4:17699891-17699910 | None:intergenic | 30.0% | |
| CTGAAAGAGAGAGTAATATT+AGG | + | chr4.4:17700192-17700211 | MS.gene34950:CDS | 30.0% | |
| CTTGAATCTCTTTCAATCTT+GGG | - | chr4.4:17700040-17700059 | None:intergenic | 30.0% | |
| GAAATTGGATGAAATGAAAG+TGG | + | chr4.4:17703287-17703306 | MS.gene34950:CDS | 30.0% | |
| GGATTGTTAGGGAAATTATT+TGG | + | chr4.4:17700816-17700835 | MS.gene34950:CDS | 30.0% | |
| TAATCTTCAGTTATCTGAGT+TGG | + | chr4.4:17701072-17701091 | MS.gene34950:CDS | 30.0% | |
| TATGAAGTATGAGTAGTTGA+AGG | - | chr4.4:17700350-17700369 | None:intergenic | 30.0% | |
| TCAATAGTTAAAGCTAAAGC+AGG | - | chr4.4:17702714-17702733 | None:intergenic | 30.0% | |
| TCTGAGAATTCAAATCAAGA+TGG | + | chr4.4:17700101-17700120 | MS.gene34950:CDS | 30.0% | |
| TTACGAGTTAAAGAACAACT+TGG | - | chr4.4:17700449-17700468 | None:intergenic | 30.0% | |
| TTTAGTGTTTGGTTGTTCAA+AGG | + | chr4.4:17701905-17701924 | MS.gene34950:intron | 30.0% | |
| ! | AAAATGTTCACGAGAGATTT+TGG | - | chr4.4:17702094-17702113 | None:intergenic | 30.0% |
| ! | AACGCCTTTTCATTTTCAAA+TGG | + | chr4.4:17700410-17700429 | MS.gene34950:CDS | 30.0% |
| ! | AAGAAATTCTGAGAGTTTGA+GGG | + | chr4.4:17700742-17700761 | MS.gene34950:CDS | 30.0% |
| ! | AGATGAAATTGATGGTTTGT+TGG | + | chr4.4:17703356-17703375 | MS.gene34950:CDS | 30.0% |
| ! | TCAAATGCTTTTCACAACAA+TGG | + | chr4.4:17700287-17700306 | MS.gene34950:CDS | 30.0% |
| ! | TTGAAATGTGCTTTTCTCTT+TGG | + | chr4.4:17702599-17702618 | MS.gene34950:intron | 30.0% |
| !! | AAAACAGCATCTTTTTCATC+TGG | - | chr4.4:17699918-17699937 | None:intergenic | 30.0% |
| !! | AAACAGCATCTTTTTCATCT+GGG | - | chr4.4:17699917-17699936 | None:intergenic | 30.0% |
| !! | AAAGGGTACTAAAGTTCAAT+TGG | + | chr4.4:17701003-17701022 | MS.gene34950:CDS | 30.0% |
| !! | CACAAATTTTGATATGAAGG+TGG | + | chr4.4:17701732-17701751 | MS.gene34950:intron | 30.0% |
| !! | GGACACAAATTTTGATATGA+AGG | + | chr4.4:17701729-17701748 | MS.gene34950:intron | 30.0% |
| !! | TGTTGATATTGCTTTTGAAG+TGG | + | chr4.4:17702023-17702042 | MS.gene34950:intron | 30.0% |
| !!! | GTTGATATTGCTTTTGAAGT+GGG | + | chr4.4:17702024-17702043 | MS.gene34950:intron | 30.0% |
| AAAACCAGAGAGGATTGTTA+GGG | + | chr4.4:17700805-17700824 | MS.gene34950:CDS | 35.0% | |
| AAATTGCATGATCTGATTGC+AGG | - | chr4.4:17701596-17701615 | None:intergenic | 35.0% | |
| AAGATGACACAACAAATCAC+AGG | - | chr4.4:17702675-17702694 | None:intergenic | 35.0% | |
| AATTAGTCAACCTTCAAAGC+AGG | + | chr4.4:17700942-17700961 | MS.gene34950:CDS | 35.0% | |
| AATTTGATCGTCTTTACTCG+CGG | - | chr4.4:17700495-17700514 | None:intergenic | 35.0% | |
| ACAATCAAGCTCTTTCAACA+AGG | - | chr4.4:17701464-17701483 | None:intergenic | 35.0% | |
| ACAATGAAACTGTATTTCCG+TGG | - | chr4.4:17701359-17701378 | None:intergenic | 35.0% | |
| AGATGACACAACAAATCACA+GGG | - | chr4.4:17702674-17702693 | None:intergenic | 35.0% | |
| ATGAATAGATGCGGAAAACA+TGG | + | chr4.4:17702828-17702847 | MS.gene34950:intron | 35.0% | |
| ATTGGATGAAATGAAAGTGG+TGG | + | chr4.4:17703290-17703309 | MS.gene34950:CDS | 35.0% | |
| CAAAGGTGGAATTGAAAGTT+TGG | + | chr4.4:17703083-17703102 | MS.gene34950:CDS | 35.0% | |
| CAAATCAAGATGGAGGAAAA+TGG | + | chr4.4:17700111-17700130 | MS.gene34950:CDS | 35.0% | |
| CATAACACCCATACCATATT+AGG | - | chr4.4:17702441-17702460 | None:intergenic | 35.0% | |
| CCAAGATTGAAAGAGATTCA+AGG | + | chr4.4:17700038-17700057 | MS.gene34950:CDS | 35.0% | |
| CCTTGAATCTCTTTCAATCT+TGG | - | chr4.4:17700041-17700060 | None:intergenic | 35.0% | |
| CGAGTAAAGACGATCAAATT+TGG | + | chr4.4:17700495-17700514 | MS.gene34950:CDS | 35.0% | |
| GAAAGCTTTCTGAGTCAAAA+GGG | + | chr4.4:17700062-17700081 | MS.gene34950:CDS | 35.0% | |
| GAGAATTCAAATCAAGATGG+AGG | + | chr4.4:17700104-17700123 | MS.gene34950:CDS | 35.0% | |
| GAGTTAGTAGGATTGTGAAT+AGG | + | chr4.4:17701703-17701722 | MS.gene34950:intron | 35.0% | |
| GATGTGATGTTTGTTCACAT+TGG | + | chr4.4:17701263-17701282 | MS.gene34950:CDS | 35.0% | |
| GTAAGAGAAAGAGAAACATC+AGG | - | chr4.4:17700263-17700282 | None:intergenic | 35.0% | |
| GTGCAAGTAATACTTGTAGT+TGG | + | chr4.4:17701236-17701255 | MS.gene34950:CDS | 35.0% | |
| GTTAAAGCTAAAGCAGGAAA+AGG | - | chr4.4:17702708-17702727 | None:intergenic | 35.0% | |
| GTTAGTTCATTTATGCAACC+AGG | + | chr4.4:17700614-17700633 | MS.gene34950:CDS | 35.0% | |
| GTTGACTAATTCGTCTTTCT+TGG | - | chr4.4:17700933-17700952 | None:intergenic | 35.0% | |
| GTTTCCACATAGATAACTCA+GGG | - | chr4.4:17700018-17700037 | None:intergenic | 35.0% | |
| TATTAGGGATAAGAGACCAA+AGG | + | chr4.4:17700208-17700227 | MS.gene34950:CDS | 35.0% | |
| TATTGGATGTGAACATGCAT+CGG | + | chr4.4:17701378-17701397 | MS.gene34950:CDS | 35.0% | |
| TCAAAAGGGTAAAGAGGTTA+TGG | + | chr4.4:17700076-17700095 | MS.gene34950:CDS | 35.0% | |
| TGAAAGCTTTCTGAGTCAAA+AGG | + | chr4.4:17700061-17700080 | MS.gene34950:CDS | 35.0% | |
| TTACAGTCACAATCATCAAC+AGG | - | chr4.4:17701151-17701170 | None:intergenic | 35.0% | |
| TTTGAAGAGAAAACAGAAGC+CGG | - | chr4.4:17702862-17702881 | None:intergenic | 35.0% | |
| ! | AGAAATTCTGAGAGTTTGAG+GGG | + | chr4.4:17700743-17700762 | MS.gene34950:CDS | 35.0% |
| ! | ATAGGTTTGAGACTCATTCA+GGG | + | chr4.4:17700708-17700727 | MS.gene34950:CDS | 35.0% |
| ! | GAAGAAATTCTGAGAGTTTG+AGG | + | chr4.4:17700741-17700760 | MS.gene34950:CDS | 35.0% |
| ! | GCAATGGTATTTTGCATTTG+AGG | + | chr4.4:17702490-17702509 | MS.gene34950:intron | 35.0% |
| ! | TAGAGGTTTTCTTGTATAGG+AGG | + | chr4.4:17701095-17701114 | MS.gene34950:CDS | 35.0% |
| ! | TGATGACGATCTTCAATTAG+CGG | + | chr4.4:17703050-17703069 | MS.gene34950:CDS | 35.0% |
| ! | TGGGTGTTATGTTACAAAGT+TGG | + | chr4.4:17702450-17702469 | MS.gene34950:intron | 35.0% |
| ! | TGGTAGAGGTTTTCTTGTAT+AGG | + | chr4.4:17701092-17701111 | MS.gene34950:CDS | 35.0% |
| ! | TTGTGACTGTAAGATTTGCT+CGG | + | chr4.4:17701159-17701178 | MS.gene34950:CDS | 35.0% |
| !! | AAAGTTTGGAGAGCATTGTT+CGG | + | chr4.4:17703097-17703116 | MS.gene34950:CDS | 35.0% |
| !! | ATTTTAGTCGCGGTAAAGAT+GGG | + | chr4.4:17701028-17701047 | MS.gene34950:CDS | 35.0% |
| !! | GTGATTTGTTGTGTCATCTT+GGG | + | chr4.4:17702675-17702694 | MS.gene34950:intron | 35.0% |
| !! | TCAATTGGAGATTTTAGTCG+CGG | + | chr4.4:17701018-17701037 | MS.gene34950:CDS | 35.0% |
| !! | TGGTATTTTGCATTTGAGGT+AGG | + | chr4.4:17702494-17702513 | MS.gene34950:intron | 35.0% |
| !! | TGTGATTTGTTGTGTCATCT+TGG | + | chr4.4:17702674-17702693 | MS.gene34950:intron | 35.0% |
| AACTGTAAGTGTCTCGACTA+TGG | + | chr4.4:17701619-17701638 | MS.gene34950:intron | 40.0% | |
| AAGATTACCGTACAAGAAGC+TGG | - | chr4.4:17701059-17701078 | None:intergenic | 40.0% | |
| AGCGAAAATGTTCCAAACCA+AGG | + | chr4.4:17703134-17703153 | MS.gene34950:CDS | 40.0% | |
| AGGTTTAAGCCAATTGGTGA+TGG | + | chr4.4:17700554-17700573 | MS.gene34950:CDS | 40.0% | |
| AGTAGGATTGTGAATAGGGA+AGG | + | chr4.4:17701708-17701727 | MS.gene34950:intron | 40.0% | |
| ATGAGTCGAGCTATTCTACT+AGG | + | chr4.4:17702965-17702984 | MS.gene34950:CDS | 40.0% | |
| ATGTCTTGTGCAAAGGATTG+GGG | + | chr4.4:17701430-17701449 | MS.gene34950:CDS | 40.0% | |
| ATTTCCCTAACAATCCTCTC+TGG | - | chr4.4:17700812-17700831 | None:intergenic | 40.0% | |
| CAAAACCAGAGAGGATTGTT+AGG | + | chr4.4:17700804-17700823 | MS.gene34950:CDS | 40.0% | |
| CAAACAATGATGAGGATGGA+TGG | + | chr4.4:17701935-17701954 | MS.gene34950:intron | 40.0% | |
| CATAGCAGGTTTAAGCCAAT+TGG | + | chr4.4:17700548-17700567 | MS.gene34950:CDS | 40.0% | |
| CATGTCTTGTGCAAAGGATT+GGG | + | chr4.4:17701429-17701448 | MS.gene34950:CDS | 40.0% | |
| CCTTGATGTCTTCTTTGGAT+GGG | - | chr4.4:17703005-17703024 | None:intergenic | 40.0% | |
| CTGTTAGAGTAAAACCTAGC+AGG | + | chr4.4:17700324-17700343 | MS.gene34950:CDS | 40.0% | |
| CTTGATGTCTTCTTTGGATG+GGG | - | chr4.4:17703004-17703023 | None:intergenic | 40.0% | |
| GAACATGCATCGGAAATGTT+TGG | + | chr4.4:17701388-17701407 | MS.gene34950:CDS | 40.0% | |
| GAGCTGCATTTGAAAACTGA+TGG | + | chr4.4:17701526-17701545 | MS.gene34950:CDS | 40.0% | |
| GCAACAATACCATCACCAAT+TGG | - | chr4.4:17700566-17700585 | None:intergenic | 40.0% | |
| GCTGGTAAAGATCTTCGTAA+TGG | + | chr4.4:17699819-17699838 | MS.gene34950:CDS | 40.0% | |
| GGAAAACATGGCAAACTTTC+CGG | + | chr4.4:17702840-17702859 | MS.gene34950:CDS | 40.0% | |
| GGAATCTTTCAAAACCAGAG+AGG | + | chr4.4:17700795-17700814 | MS.gene34950:CDS | 40.0% | |
| GGTTTCCACATAGATAACTC+AGG | - | chr4.4:17700019-17700038 | None:intergenic | 40.0% | |
| TATTCTACTAGGCCACATTC+CGG | + | chr4.4:17702976-17702995 | MS.gene34950:CDS | 40.0% | |
| TCATCTGGGTAACGTTTGTT+TGG | - | chr4.4:17699903-17699922 | None:intergenic | 40.0% | |
| TCATGTCTTGTGCAAAGGAT+TGG | + | chr4.4:17701428-17701447 | MS.gene34950:CDS | 40.0% | |
| TCCAAGGAGACACTTTCAAA+GGG | + | chr4.4:17700986-17701005 | MS.gene34950:CDS | 40.0% | |
| TCTGAGTCAAAAGGGTAAAG+AGG | + | chr4.4:17700070-17700089 | MS.gene34950:CDS | 40.0% | |
| TCTTTGTCCTGATCATCTTC+TGG | - | chr4.4:17703191-17703210 | None:intergenic | 40.0% | |
| TGAAAGAGCTTGATTGTGTG+AGG | + | chr4.4:17701467-17701486 | MS.gene34950:CDS | 40.0% | |
| TGTGTTCATGTCTTGTGCAA+AGG | + | chr4.4:17701423-17701442 | MS.gene34950:CDS | 40.0% | |
| TTAGCGGCTTTACTAAGCAA+AGG | + | chr4.4:17703066-17703085 | MS.gene34950:CDS | 40.0% | |
| TTCCAAGGAGACACTTTCAA+AGG | + | chr4.4:17700985-17701004 | MS.gene34950:CDS | 40.0% | |
| TTGACCCTGAGTTATCTATG+TGG | + | chr4.4:17700011-17700030 | MS.gene34950:CDS | 40.0% | |
| ! | AAGATTTGCTCGGGAAACAA+AGG | + | chr4.4:17701169-17701188 | MS.gene34950:CDS | 40.0% |
| ! | AGATTTGCTCGGGAAACAAA+GGG | + | chr4.4:17701170-17701189 | MS.gene34950:CDS | 40.0% |
| ! | CAAATTTGGAACTGTGGTGA+AGG | + | chr4.4:17700509-17700528 | MS.gene34950:CDS | 40.0% |
| ! | CATAGGTTTGAGACTCATTC+AGG | + | chr4.4:17700707-17700726 | MS.gene34950:CDS | 40.0% |
| ! | CTGCTAGGTTTTACTCTAAC+AGG | - | chr4.4:17700326-17700345 | None:intergenic | 40.0% |
| ! | GACGATCAAATTTGGAACTG+TGG | + | chr4.4:17700503-17700522 | MS.gene34950:CDS | 40.0% |
| ! | GGCTTCTGTTTTCTCTTCAA+AGG | + | chr4.4:17702861-17702880 | MS.gene34950:CDS | 40.0% |
| ! | GGGTCTTGATAACTTACTTC+TGG | - | chr4.4:17699871-17699890 | None:intergenic | 40.0% |
| ! | TAGGTTTGAGACTCATTCAG+GGG | + | chr4.4:17700709-17700728 | MS.gene34950:CDS | 40.0% |
| ! | TGTGACTGTAAGATTTGCTC+GGG | + | chr4.4:17701160-17701179 | MS.gene34950:CDS | 40.0% |
| ! | TGTGTGAGGAGGATTTTCAT+GGG | + | chr4.4:17701481-17701500 | MS.gene34950:CDS | 40.0% |
| ! | TTGTGTGAGGAGGATTTTCA+TGG | + | chr4.4:17701480-17701499 | MS.gene34950:CDS | 40.0% |
| ! | TTTCTGAGAGATTCCGACAT+GGG | + | chr4.4:17699936-17699955 | MS.gene34950:CDS | 40.0% |
| !! | AACTGTGGTGAAGGTACTAA+TGG | + | chr4.4:17700518-17700537 | MS.gene34950:CDS | 40.0% |
| !! | AATGGTGTTGCTGATTCTGA+TGG | + | chr4.4:17699837-17699856 | MS.gene34950:CDS | 40.0% |
| !! | ATTGTTGCTTTGGCAAATCC+TGG | + | chr4.4:17700578-17700597 | MS.gene34950:CDS | 40.0% |
| !! | GATTTTAGTCGCGGTAAAGA+TGG | + | chr4.4:17701027-17701046 | MS.gene34950:CDS | 40.0% |
| !! | TCAGTTATCTGAGTTGGTAG+AGG | + | chr4.4:17701078-17701097 | MS.gene34950:CDS | 40.0% |
| !! | TGGTGATGGTATTGTTGCTT+TGG | + | chr4.4:17700568-17700587 | MS.gene34950:CDS | 40.0% |
| !! | TTTTCTGAGAGATTCCGACA+TGG | + | chr4.4:17699935-17699954 | MS.gene34950:CDS | 40.0% |
| AAACCAAGGCAGATGAAGCA+AGG | + | chr4.4:17703148-17703167 | MS.gene34950:CDS | 45.0% | |
| AACAGGAAGCAAACTCTTGC+AGG | - | chr4.4:17701134-17701153 | None:intergenic | 45.0% | |
| AACTGCAGCCCTATGAAACA+CGG | + | chr4.4:17702537-17702556 | MS.gene34950:intron | 45.0% | |
| AAGAGCTTGATTGTGTGAGG+AGG | + | chr4.4:17701470-17701489 | MS.gene34950:CDS | 45.0% | |
| AAGGGTTCCAGAAGATGATC+AGG | + | chr4.4:17703181-17703200 | MS.gene34950:CDS | 45.0% | |
| ACTCATTCAGGGGATTCAAG+GGG | + | chr4.4:17700719-17700738 | MS.gene34950:CDS | 45.0% | |
| ACTCTGTCTGAATGATACCG+AGG | + | chr4.4:17703251-17703270 | MS.gene34950:CDS | 45.0% | |
| AGACTCATTCAGGGGATTCA+AGG | + | chr4.4:17700717-17700736 | MS.gene34950:CDS | 45.0% | |
| AGATCCAGTGTCTGAACCTT+TGG | - | chr4.4:17700227-17700246 | None:intergenic | 45.0% | |
| AGTGTTTGCATGTGAGTGTC+TGG | - | chr4.4:17702566-17702585 | None:intergenic | 45.0% | |
| ATCTGATTGCAGGCTTCTGA+AGG | - | chr4.4:17701586-17701605 | None:intergenic | 45.0% | |
| ATGACACTGTGTCCTAGCAA+TGG | + | chr4.4:17702474-17702493 | MS.gene34950:intron | 45.0% | |
| CAGAAGAAGCTCATCAAACC+CGG | + | chr4.4:17701307-17701326 | MS.gene34950:CDS | 45.0% | |
| CAGACACTGGATCTTTCTCT+TGG | + | chr4.4:17700233-17700252 | MS.gene34950:CDS | 45.0% | |
| CCCATCCAAAGAAGACATCA+AGG | + | chr4.4:17703002-17703021 | MS.gene34950:CDS | 45.0% | |
| CCTACTAACTCAAATGCTGC+AGG | - | chr4.4:17701694-17701713 | None:intergenic | 45.0% | |
| CGTTGATGTCACAACTTCCT+CGG | - | chr4.4:17700882-17700901 | None:intergenic | 45.0% | |
| CTAACACCAGTTCCATTTCC+AGG | - | chr4.4:17700599-17700618 | None:intergenic | 45.0% | |
| CTGAATTGCCTGCTAGACAT+AGG | + | chr4.4:17700690-17700709 | MS.gene34950:CDS | 45.0% | |
| GACTCATTCAGGGGATTCAA+GGG | + | chr4.4:17700718-17700737 | MS.gene34950:CDS | 45.0% | |
| GAGAAGGTCTGATCTTTCCA+AGG | + | chr4.4:17700970-17700989 | MS.gene34950:CDS | 45.0% | |
| GCAAATCCTGGAAATGGAAC+TGG | + | chr4.4:17700590-17700609 | MS.gene34950:CDS | 45.0% | |
| GCCTTGATGTCTTCTTTGGA+TGG | - | chr4.4:17703006-17703025 | None:intergenic | 45.0% | |
| GCTTTGGCAAATCCTGGAAA+TGG | + | chr4.4:17700584-17700603 | MS.gene34950:CDS | 45.0% | |
| GGAAGTTGTGACATCAACGA+AGG | + | chr4.4:17700883-17700902 | MS.gene34950:CDS | 45.0% | |
| GTCTCAAACCTATGTCTAGC+AGG | - | chr4.4:17700701-17700720 | None:intergenic | 45.0% | |
| GTTGTGTCATCTTGGGTAGA+AGG | + | chr4.4:17702682-17702701 | MS.gene34950:intron | 45.0% | |
| TGTATTTCCGTGGTACCAGA+AGG | - | chr4.4:17701349-17701368 | None:intergenic | 45.0% | |
| TGTCTAGCAGGCAATTCAGA+AGG | - | chr4.4:17700689-17700708 | None:intergenic | 45.0% | |
| TGTCTTGTGCAAAGGATTGG+GGG | + | chr4.4:17701431-17701450 | MS.gene34950:CDS | 45.0% | |
| TTCAAAGCAGGCTTGAGAGA+AGG | + | chr4.4:17700954-17700973 | MS.gene34950:CDS | 45.0% | |
| TTCTCTCAAGCCTGCTTTGA+AGG | - | chr4.4:17700955-17700974 | None:intergenic | 45.0% | |
| TTGCTTCATCTGCCTTGGTT+TGG | - | chr4.4:17703149-17703168 | None:intergenic | 45.0% | |
| TTTGAAGGTTTAGCTGGTGG+TGG | + | chr4.4:17700767-17700786 | MS.gene34950:CDS | 45.0% | |
| ! | CCTGCAGCATTTGAGTTAGT+AGG | + | chr4.4:17701691-17701710 | MS.gene34950:intron | 45.0% |
| ! | GAGCATTGTTCGGATAAAGG+AGG | + | chr4.4:17703107-17703126 | MS.gene34950:CDS | 45.0% |
| ! | GAGGATTTTCATGGGAAGTG+AGG | + | chr4.4:17701489-17701508 | MS.gene34950:CDS | 45.0% |
| ! | GGTAGCCTTGATGTCTTCTT+TGG | - | chr4.4:17703010-17703029 | None:intergenic | 45.0% |
| !! | ACCCTTTGAAAGTGTCTCCT+TGG | - | chr4.4:17700990-17701009 | None:intergenic | 45.0% |
| !! | GAGAGTTTGAGGGGTTTTGA+AGG | + | chr4.4:17700752-17700771 | MS.gene34950:CDS | 45.0% |
| !! | GGAGAGCATTGTTCGGATAA+AGG | + | chr4.4:17703104-17703123 | MS.gene34950:CDS | 45.0% |
| !! | GTTTAGCTGGTGGTGGAAAT+AGG | + | chr4.4:17700774-17700793 | MS.gene34950:CDS | 45.0% |
| !! | TGATGGTTTGTTGGCGAGAA+TGG | + | chr4.4:17703365-17703384 | MS.gene34950:CDS | 45.0% |
| !!! | AGGGGTTTTGAAGGTTTAGC+TGG | + | chr4.4:17700761-17700780 | MS.gene34950:CDS | 45.0% |
| !!! | GGTTTTGAAGGTTTAGCTGG+TGG | + | chr4.4:17700764-17700783 | MS.gene34950:CDS | 45.0% |
| AAGTGAGGATCGCAAAGGGA+AGG | + | chr4.4:17701504-17701523 | MS.gene34950:CDS | 50.0% | |
| ACTGCAGCCCTATGAAACAC+GGG | + | chr4.4:17702538-17702557 | MS.gene34950:intron | 50.0% | |
| ATGATACCGAGGAAACGCAG+AGG | + | chr4.4:17703262-17703281 | MS.gene34950:CDS | 50.0% | |
| ATGGGAAGTGAGGATCGCAA+AGG | + | chr4.4:17701499-17701518 | MS.gene34950:CDS | 50.0% | |
| CAAGGCAGATGAAGCAAGGA+GGG | + | chr4.4:17703152-17703171 | MS.gene34950:CDS | 50.0% | |
| CAGGACAAAGACTGCACAGA+TGG | + | chr4.4:17703200-17703219 | MS.gene34950:CDS | 50.0% | |
| CCAGAAGGTCCTTTCAAGCT+CGG | - | chr4.4:17701334-17701353 | None:intergenic | 50.0% | |
| CGGGTTTGATGAGCTTCTTC+TGG | - | chr4.4:17701309-17701328 | None:intergenic | 50.0% | |
| CTGAGTTACCACCAGAAACC+TGG | - | chr4.4:17699980-17699999 | None:intergenic | 50.0% | |
| GAAAGGACCTTCTGGTACCA+CGG | + | chr4.4:17701339-17701358 | MS.gene34950:CDS | 50.0% | |
| GAGACCAAAGGTTCAGACAC+TGG | + | chr4.4:17700220-17700239 | MS.gene34950:CDS | 50.0% | |
| GATTCCGACATGGGTGGTAT+TGG | + | chr4.4:17699945-17699964 | MS.gene34950:CDS | 50.0% | |
| GCGGCTTTACTAAGCAAAGG+TGG | + | chr4.4:17703069-17703088 | MS.gene34950:CDS | 50.0% | |
| GGAAACGCAGAGGAGGAAAT+TGG | + | chr4.4:17703272-17703291 | MS.gene34950:CDS | 50.0% | |
| GGACTGTCCAGCTTCTTGTA+CGG | + | chr4.4:17701049-17701068 | MS.gene34950:CDS | 50.0% | |
| GGAGGCAACAAAGCAGCATT+GGG | + | chr4.4:17703386-17703405 | MS.gene34950:CDS | 50.0% | |
| GTTACCACCAGAAACCTGGT+TGG | - | chr4.4:17699976-17699995 | None:intergenic | 50.0% | |
| TCTGGATGCCACAAACAGCA+TGG | - | chr4.4:17701291-17701310 | None:intergenic | 50.0% | |
| TCTGGTGCCCGTGTTTCATA+GGG | - | chr4.4:17702548-17702567 | None:intergenic | 50.0% | |
| TGAGTAGTTGAAGGCCTGCT+AGG | - | chr4.4:17700341-17700360 | None:intergenic | 50.0% | |
| TGGAGGCAACAAAGCAGCAT+TGG | + | chr4.4:17703385-17703404 | MS.gene34950:CDS | 50.0% | |
| TGGGAAGTGAGGATCGCAAA+GGG | + | chr4.4:17701500-17701519 | MS.gene34950:CDS | 50.0% | |
| TTTCCTCCTCTGCGTTTCCT+CGG | - | chr4.4:17703271-17703290 | None:intergenic | 50.0% | |
| ! | CTAATGGCTCTGTGCATAGC+AGG | + | chr4.4:17700534-17700553 | MS.gene34950:CDS | 50.0% |
| ! | GCATTTGAGGTAGGAAGCGT+TGG | + | chr4.4:17702503-17702522 | MS.gene34950:intron | 50.0% |
| !! | CAGGTTTCTGGTGGTAACTC+AGG | + | chr4.4:17699978-17699997 | MS.gene34950:CDS | 50.0% |
| !! | CATTGGTGCCATGCTGTTTG+TGG | + | chr4.4:17701280-17701299 | MS.gene34950:CDS | 50.0% |
| !! | TGGTTTGTTGGCGAGAATGG+AGG | + | chr4.4:17703368-17703387 | MS.gene34950:CDS | 50.0% |
| AAACCCGGACCGAGCTTGAA+AGG | + | chr4.4:17701322-17701341 | MS.gene34950:CDS | 55.0% | |
| AGGTCCTTTCAAGCTCGGTC+CGG | - | chr4.4:17701329-17701348 | None:intergenic | 55.0% | |
| ATACCGAGGAAACGCAGAGG+AGG | + | chr4.4:17703265-17703284 | MS.gene34950:CDS | 55.0% | |
| CCAAGGCAGATGAAGCAAGG+AGG | + | chr4.4:17703151-17703170 | MS.gene34950:CDS | 55.0% | |
| CCCACCAATACCACCCATGT+CGG | - | chr4.4:17699952-17699971 | None:intergenic | 55.0% | |
| CCGAGCTTGAAAGGACCTTC+TGG | + | chr4.4:17701331-17701350 | MS.gene34950:CDS | 55.0% | |
| CCTCCTTGCTTCATCTGCCT+TGG | - | chr4.4:17703154-17703173 | None:intergenic | 55.0% | |
| CTCTCAAGCCAGCCTTCCAA+AGG | + | chr4.4:17702894-17702913 | MS.gene34950:CDS | 55.0% | |
| CTGAGAGATTCCGACATGGG+TGG | + | chr4.4:17699939-17699958 | MS.gene34950:CDS | 55.0% | |
| GACAATTCAGGAGCTTGCCG+AGG | + | chr4.4:17700862-17700881 | MS.gene34950:CDS | 55.0% | |
| GAGACAGCGTGTCCTTTGGA+AGG | - | chr4.4:17702909-17702928 | None:intergenic | 55.0% | |
| GGAAGAGACAGCGTGTCCTT+TGG | - | chr4.4:17702913-17702932 | None:intergenic | 55.0% | |
| GTCTGGTGCCCGTGTTTCAT+AGG | - | chr4.4:17702549-17702568 | None:intergenic | 55.0% | |
| GTCTTCTTTGGATGGGGCAC+CGG | - | chr4.4:17702998-17703017 | None:intergenic | 55.0% | |
| ! | TCCGACATGGGTGGTATTGG+TGG | + | chr4.4:17699948-17699967 | MS.gene34950:CDS | 55.0% |
| !! | CCGACATGGGTGGTATTGGT+GGG | + | chr4.4:17699949-17699968 | MS.gene34950:CDS | 55.0% |
| !! | CTTTGGAAGGCTGGCTTGAG+AGG | - | chr4.4:17702896-17702915 | None:intergenic | 55.0% |
| !! | TGGTATTGGTGGGTCCAACC+AGG | + | chr4.4:17699959-17699978 | MS.gene34950:CDS | 55.0% |
| AAGCAAGGAGGGCGGCAGAA+GGG | + | chr4.4:17703163-17703182 | MS.gene34950:CDS | 60.0% | |
| GGCAGATGAAGCAAGGAGGG+CGG | + | chr4.4:17703155-17703174 | MS.gene34950:CDS | 60.0% | |
| GGTCCTTTCAAGCTCGGTCC+GGG | - | chr4.4:17701328-17701347 | None:intergenic | 60.0% | |
| GGTGGGTCCAACCAGGTTTC+TGG | + | chr4.4:17699966-17699985 | MS.gene34950:CDS | 60.0% | |
| ! | CAGCGTGTCCTTTGGAAGGC+TGG | - | chr4.4:17702905-17702924 | None:intergenic | 60.0% |
| ! | GGGTCCAACCAGGTTTCTGG+TGG | + | chr4.4:17699969-17699988 | MS.gene34950:CDS | 60.0% |
| !! | TTGGATGGGGCACCGGAATG+TGG | - | chr4.4:17702991-17703010 | None:intergenic | 60.0% |
| GAAGCAAGGAGGGCGGCAGA+AGG | + | chr4.4:17703162-17703181 | MS.gene34950:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 17699813 | 17703413 | 17699813 | ID=MS.gene34950 |
| chr4.4 | mRNA | 17699813 | 17703413 | 17699813 | ID=MS.gene34950.t1;Parent=MS.gene34950 |
| chr4.4 | exon | 17699813 | 17701622 | 17699813 | ID=MS.gene34950.t1.exon1;Parent=MS.gene34950.t1 |
| chr4.4 | CDS | 17699813 | 17701622 | 17699813 | ID=cds.MS.gene34950.t1;Parent=MS.gene34950.t1 |
| chr4.4 | exon | 17702836 | 17703413 | 17702836 | ID=MS.gene34950.t1.exon2;Parent=MS.gene34950.t1 |
| chr4.4 | CDS | 17702836 | 17703413 | 17702836 | ID=cds.MS.gene34950.t1;Parent=MS.gene34950.t1 |
| Gene Sequence |
| Protein sequence |
