Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061782.t1 | XP_013446808.1 | 84.1 | 207 | 0 | 1 | 1 | 174 | 1 | 207 | 2.20E-84 | 321.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061782.t1 | Q9SID8 | 72.0 | 207 | 25 | 1 | 1 | 174 | 1 | 207 | 1.8e-74 | 280.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061782.t1 | A0A072U4T2 | 84.1 | 207 | 0 | 1 | 1 | 174 | 1 | 207 | 1.6e-84 | 321.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene061782 | 0.854081 | 1.56E-61 | -1.69E-46 |
| MS.gene04919 | MS.gene061782 | 0.841406 | 4.85E-58 | -1.69E-46 |
| MS.gene04920 | MS.gene061782 | 0.857016 | 2.17E-62 | -1.69E-46 |
| MS.gene049283 | MS.gene061782 | 0.840078 | 1.08E-57 | -1.69E-46 |
| MS.gene049499 | MS.gene061782 | 0.854227 | 1.42E-61 | -1.69E-46 |
| MS.gene049680 | MS.gene061782 | 0.85043 | 1.71E-60 | -1.69E-46 |
| MS.gene049983 | MS.gene061782 | 0.809474 | 1.86E-50 | -1.69E-46 |
| MS.gene050414 | MS.gene061782 | 0.822866 | 1.88E-53 | -1.69E-46 |
| MS.gene050559 | MS.gene061782 | 0.804845 | 1.78E-49 | -1.69E-46 |
| MS.gene050646 | MS.gene061782 | 0.804049 | 2.60E-49 | -1.69E-46 |
| MS.gene050945 | MS.gene061782 | 0.840469 | 8.53E-58 | -1.69E-46 |
| MS.gene050955 | MS.gene061782 | 0.802981 | 4.33E-49 | -1.69E-46 |
| MS.gene051019 | MS.gene061782 | 0.807318 | 5.36E-50 | -1.69E-46 |
| MS.gene051043 | MS.gene061782 | 0.811034 | 8.57E-51 | -1.69E-46 |
| MS.gene051234 | MS.gene061782 | 0.803418 | 3.52E-49 | -1.69E-46 |
| MS.gene051637 | MS.gene061782 | 0.808303 | 3.31E-50 | -1.69E-46 |
| MS.gene051699 | MS.gene061782 | 0.855979 | 4.39E-62 | -1.69E-46 |
| MS.gene051832 | MS.gene061782 | 0.801998 | 6.91E-49 | -1.69E-46 |
| MS.gene051959 | MS.gene061782 | 0.815909 | 7.26E-52 | -1.69E-46 |
| MS.gene051960 | MS.gene061782 | 0.820046 | 8.43E-53 | -1.69E-46 |
| MS.gene052072 | MS.gene061782 | 0.814371 | 1.59E-51 | -1.69E-46 |
| MS.gene052533 | MS.gene061782 | 0.857999 | 1.11E-62 | -1.69E-46 |
| MS.gene052793 | MS.gene061782 | 0.847446 | 1.15E-59 | -1.69E-46 |
| MS.gene053228 | MS.gene061782 | 0.82727 | 1.72E-54 | -1.69E-46 |
| MS.gene053272 | MS.gene061782 | -0.856052 | 4.17E-62 | -1.69E-46 |
| MS.gene053879 | MS.gene061782 | 0.831386 | 1.72E-55 | -1.69E-46 |
| MS.gene053963 | MS.gene061782 | 0.802108 | 6.56E-49 | -1.69E-46 |
| MS.gene054004 | MS.gene061782 | 0.810853 | 9.38E-51 | -1.69E-46 |
| MS.gene054222 | MS.gene061782 | 0.809605 | 1.74E-50 | -1.69E-46 |
| MS.gene054413 | MS.gene061782 | 0.809134 | 2.20E-50 | -1.69E-46 |
| MS.gene054892 | MS.gene061782 | 0.827927 | 1.19E-54 | -1.69E-46 |
| MS.gene054893 | MS.gene061782 | 0.836904 | 7.12E-57 | -1.69E-46 |
| MS.gene054957 | MS.gene061782 | 0.810485 | 1.13E-50 | -1.69E-46 |
| MS.gene055150 | MS.gene061782 | 0.902575 | 8.42E-79 | -1.69E-46 |
| MS.gene055724 | MS.gene061782 | 0.800109 | 1.68E-48 | -1.69E-46 |
| MS.gene055801 | MS.gene061782 | 0.812634 | 3.84E-51 | -1.69E-46 |
| MS.gene056082 | MS.gene061782 | 0.824198 | 9.19E-54 | -1.69E-46 |
| MS.gene05624 | MS.gene061782 | 0.849842 | 2.49E-60 | -1.69E-46 |
| MS.gene056677 | MS.gene061782 | 0.838902 | 2.18E-57 | -1.69E-46 |
| MS.gene056699 | MS.gene061782 | 0.837672 | 4.53E-57 | -1.69E-46 |
| MS.gene05686 | MS.gene061782 | 0.810263 | 1.26E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene061782 | 0.87638 | 1.46E-68 | -1.69E-46 |
| MS.gene057148 | MS.gene061782 | -0.80068 | 1.29E-48 | -1.69E-46 |
| MS.gene057208 | MS.gene061782 | 0.81474 | 1.32E-51 | -1.69E-46 |
| MS.gene057220 | MS.gene061782 | 0.802947 | 4.40E-49 | -1.69E-46 |
| MS.gene057622 | MS.gene061782 | 0.829842 | 4.11E-55 | -1.69E-46 |
| MS.gene058008 | MS.gene061782 | 0.828031 | 1.13E-54 | -1.69E-46 |
| MS.gene058095 | MS.gene061782 | 0.848356 | 6.46E-60 | -1.69E-46 |
| MS.gene058159 | MS.gene061782 | 0.8423 | 2.81E-58 | -1.69E-46 |
| MS.gene058592 | MS.gene061782 | 0.846845 | 1.68E-59 | -1.69E-46 |
| MS.gene058781 | MS.gene061782 | 0.832199 | 1.08E-55 | -1.69E-46 |
| MS.gene05878 | MS.gene061782 | 0.865596 | 5.27E-65 | -1.69E-46 |
| MS.gene059146 | MS.gene061782 | 0.812165 | 4.86E-51 | -1.69E-46 |
| MS.gene05952 | MS.gene061782 | 0.885597 | 7.09E-72 | -1.69E-46 |
| MS.gene05956 | MS.gene061782 | 0.81501 | 1.15E-51 | -1.69E-46 |
| MS.gene059634 | MS.gene061782 | 0.801757 | 7.74E-49 | -1.69E-46 |
| MS.gene059802 | MS.gene061782 | 0.816353 | 5.78E-52 | -1.69E-46 |
| MS.gene05985 | MS.gene061782 | -0.890605 | 8.47E-74 | -1.69E-46 |
| MS.gene059901 | MS.gene061782 | -0.840495 | 8.40E-58 | -1.69E-46 |
| MS.gene059949 | MS.gene061782 | 0.814209 | 1.73E-51 | -1.69E-46 |
| MS.gene06023 | MS.gene061782 | 0.811706 | 6.12E-51 | -1.69E-46 |
| MS.gene060244 | MS.gene061782 | 0.822618 | 2.15E-53 | -1.69E-46 |
| MS.gene060338 | MS.gene061782 | 0.814054 | 1.87E-51 | -1.69E-46 |
| MS.gene060522 | MS.gene061782 | 0.836673 | 8.15E-57 | -1.69E-46 |
| MS.gene060933 | MS.gene061782 | 0.814998 | 1.16E-51 | -1.69E-46 |
| MS.gene060935 | MS.gene061782 | 0.84617 | 2.57E-59 | -1.69E-46 |
| MS.gene060937 | MS.gene061782 | 0.856061 | 4.15E-62 | -1.69E-46 |
| MS.gene061100 | MS.gene061782 | 0.841037 | 6.06E-58 | -1.69E-46 |
| MS.gene061160 | MS.gene061782 | 0.826742 | 2.30E-54 | -1.69E-46 |
| MS.gene061188 | MS.gene061782 | 0.822454 | 2.35E-53 | -1.69E-46 |
| MS.gene061243 | MS.gene061782 | 0.851212 | 1.03E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061782.t1 | MTR_8g090215 | 84.058 | 207 | 0 | 1 | 1 | 174 | 1 | 207 | 1.04e-121 | 342 |
| MS.gene061782.t1 | MTR_3g087160 | 77.778 | 207 | 12 | 2 | 1 | 174 | 1 | 206 | 2.44e-109 | 310 |
| MS.gene061782.t1 | MTR_5g013900 | 68.599 | 207 | 32 | 1 | 1 | 174 | 1 | 207 | 1.51e-97 | 281 |
| MS.gene061782.t1 | MTR_4g098950 | 69.082 | 207 | 30 | 2 | 1 | 174 | 1 | 206 | 3.14e-97 | 280 |
| MS.gene061782.t1 | MTR_5g076590 | 37.267 | 161 | 68 | 1 | 11 | 138 | 12 | 172 | 5.03e-34 | 119 |
| MS.gene061782.t1 | MTR_1g094220 | 39.024 | 164 | 66 | 1 | 9 | 138 | 31 | 194 | 7.87e-34 | 119 |
| MS.gene061782.t1 | MTR_8g103550 | 39.130 | 161 | 65 | 1 | 11 | 138 | 11 | 171 | 3.19e-33 | 117 |
| MS.gene061782.t1 | MTR_3g064390 | 36.646 | 161 | 69 | 1 | 11 | 138 | 12 | 172 | 6.62e-33 | 116 |
| MS.gene061782.t1 | MTR_8g031680 | 37.267 | 161 | 68 | 1 | 10 | 137 | 7 | 167 | 3.67e-32 | 114 |
| MS.gene061782.t1 | MTR_1g094220 | 38.365 | 159 | 64 | 1 | 9 | 133 | 31 | 189 | 1.45e-31 | 113 |
| MS.gene061782.t1 | MTR_8g031870 | 46.218 | 119 | 64 | 0 | 19 | 137 | 49 | 167 | 5.59e-31 | 111 |
| MS.gene061782.t1 | MTR_8g031660 | 37.888 | 161 | 67 | 1 | 10 | 137 | 7 | 167 | 1.03e-30 | 110 |
| MS.gene061782.t1 | MTR_1g094220 | 38.462 | 156 | 62 | 1 | 9 | 130 | 31 | 186 | 1.31e-30 | 110 |
| MS.gene061782.t1 | MTR_1g094220 | 38.462 | 156 | 62 | 1 | 9 | 130 | 31 | 186 | 1.37e-30 | 111 |
| MS.gene061782.t1 | MTR_2g102060 | 35.758 | 165 | 69 | 2 | 11 | 138 | 12 | 176 | 5.32e-30 | 108 |
| MS.gene061782.t1 | MTR_4g064897 | 34.395 | 157 | 70 | 1 | 10 | 133 | 13 | 169 | 6.23e-29 | 106 |
| MS.gene061782.t1 | MTR_2g027660 | 33.540 | 161 | 74 | 1 | 10 | 137 | 7 | 167 | 3.69e-28 | 104 |
| MS.gene061782.t1 | MTR_8g027220 | 36.306 | 157 | 67 | 1 | 10 | 133 | 27 | 183 | 8.36e-28 | 104 |
| MS.gene061782.t1 | MTR_8g031830 | 36.601 | 153 | 64 | 1 | 10 | 129 | 7 | 159 | 9.98e-28 | 103 |
| MS.gene061782.t1 | MTR_6g021790 | 33.540 | 161 | 74 | 1 | 10 | 137 | 7 | 167 | 2.18e-27 | 102 |
| MS.gene061782.t1 | MTR_7g081700 | 32.000 | 200 | 93 | 3 | 10 | 173 | 9 | 201 | 8.70e-27 | 100 |
| MS.gene061782.t1 | MTR_1g062760 | 33.500 | 200 | 92 | 5 | 10 | 172 | 15 | 210 | 2.67e-26 | 99.8 |
| MS.gene061782.t1 | MTR_8g036220 | 31.056 | 161 | 78 | 1 | 10 | 137 | 17 | 177 | 3.51e-26 | 99.8 |
| MS.gene061782.t1 | MTR_7g051940 | 35.065 | 154 | 67 | 1 | 10 | 130 | 14 | 167 | 4.03e-26 | 99.4 |
| MS.gene061782.t1 | MTR_6g079550 | 31.638 | 177 | 86 | 2 | 10 | 153 | 13 | 187 | 4.34e-26 | 99.4 |
| MS.gene061782.t1 | MTR_3g069510 | 29.126 | 206 | 101 | 3 | 10 | 173 | 13 | 215 | 6.87e-26 | 99.0 |
| MS.gene061782.t1 | MTR_7g405790 | 30.542 | 203 | 103 | 3 | 10 | 174 | 16 | 218 | 1.08e-25 | 98.6 |
| MS.gene061782.t1 | MTR_3g086980 | 29.293 | 198 | 91 | 3 | 10 | 174 | 17 | 198 | 1.15e-25 | 98.2 |
| MS.gene061782.t1 | MTR_8g089985 | 32.468 | 154 | 71 | 1 | 10 | 130 | 18 | 171 | 2.03e-25 | 97.8 |
| MS.gene061782.t1 | MTR_8g006970 | 31.343 | 201 | 94 | 4 | 10 | 173 | 23 | 216 | 3.09e-25 | 97.1 |
| MS.gene061782.t1 | MTR_2g005500 | 30.890 | 191 | 96 | 2 | 10 | 164 | 10 | 200 | 3.10e-25 | 96.7 |
| MS.gene061782.t1 | MTR_1g115325 | 31.313 | 198 | 99 | 4 | 11 | 172 | 17 | 213 | 3.94e-25 | 96.7 |
| MS.gene061782.t1 | MTR_2g005510 | 31.613 | 155 | 73 | 1 | 10 | 131 | 16 | 170 | 4.69e-25 | 96.7 |
| MS.gene061782.t1 | MTR_4g099470 | 36.601 | 153 | 92 | 2 | 21 | 173 | 30 | 177 | 6.59e-25 | 95.1 |
| MS.gene061782.t1 | MTR_8g006970 | 33.540 | 161 | 74 | 1 | 10 | 137 | 9 | 169 | 8.15e-25 | 95.1 |
| MS.gene061782.t1 | MTR_1g078200 | 31.847 | 157 | 74 | 1 | 10 | 133 | 15 | 171 | 1.17e-24 | 95.9 |
| MS.gene061782.t1 | MTR_1g068740 | 34.810 | 158 | 69 | 2 | 11 | 134 | 17 | 174 | 1.46e-24 | 95.5 |
| MS.gene061782.t1 | MTR_1g068730 | 34.810 | 158 | 69 | 2 | 11 | 134 | 17 | 174 | 2.15e-24 | 94.7 |
| MS.gene061782.t1 | MTR_7g100020 | 34.810 | 158 | 69 | 2 | 11 | 134 | 17 | 174 | 2.17e-24 | 94.7 |
| MS.gene061782.t1 | MTR_2g075950 | 30.573 | 157 | 76 | 1 | 10 | 133 | 14 | 170 | 4.02e-24 | 94.4 |
| MS.gene061782.t1 | MTR_0262s0050 | 28.497 | 193 | 91 | 2 | 10 | 169 | 16 | 194 | 4.02e-24 | 94.4 |
| MS.gene061782.t1 | MTR_1g052475 | 27.536 | 207 | 106 | 2 | 10 | 172 | 16 | 222 | 4.57e-24 | 94.4 |
| MS.gene061782.t1 | MTR_4g088090 | 30.573 | 157 | 76 | 1 | 10 | 133 | 14 | 170 | 1.67e-23 | 92.8 |
| MS.gene061782.t1 | MTR_2g096550 | 33.962 | 159 | 70 | 3 | 11 | 134 | 17 | 175 | 2.11e-23 | 92.4 |
| MS.gene061782.t1 | MTR_1g090717 | 33.000 | 200 | 95 | 5 | 10 | 173 | 16 | 212 | 2.13e-23 | 92.0 |
| MS.gene061782.t1 | MTR_2g083860 | 29.814 | 161 | 80 | 1 | 10 | 137 | 14 | 174 | 3.29e-23 | 92.0 |
| MS.gene061782.t1 | MTR_2g014990 | 30.573 | 157 | 76 | 1 | 10 | 133 | 14 | 170 | 3.33e-23 | 91.7 |
| MS.gene061782.t1 | MTR_7g103070 | 35.404 | 161 | 93 | 4 | 19 | 173 | 3 | 158 | 3.95e-23 | 90.1 |
| MS.gene061782.t1 | MTR_2g090865 | 29.885 | 174 | 89 | 1 | 10 | 150 | 12 | 185 | 5.09e-23 | 91.3 |
| MS.gene061782.t1 | MTR_7g103070 | 30.542 | 203 | 97 | 5 | 10 | 173 | 17 | 214 | 6.36e-23 | 90.9 |
| MS.gene061782.t1 | MTR_4g079350 | 29.814 | 161 | 80 | 1 | 10 | 137 | 14 | 174 | 8.83e-23 | 90.9 |
| MS.gene061782.t1 | MTR_8g093740 | 33.544 | 158 | 71 | 3 | 10 | 133 | 14 | 171 | 7.07e-22 | 88.2 |
| MS.gene061782.t1 | MTR_4g063160 | 30.348 | 201 | 99 | 5 | 11 | 172 | 17 | 215 | 8.43e-22 | 88.2 |
| MS.gene061782.t1 | MTR_3g064390 | 35.200 | 125 | 48 | 1 | 11 | 102 | 12 | 136 | 9.73e-22 | 86.7 |
| MS.gene061782.t1 | MTR_3g096350 | 33.544 | 158 | 71 | 3 | 10 | 133 | 13 | 170 | 9.47e-21 | 85.1 |
| MS.gene061782.t1 | MTR_7g117910 | 31.081 | 148 | 65 | 2 | 6 | 116 | 13 | 160 | 2.27e-20 | 84.3 |
| MS.gene061782.t1 | MTR_8g107070 | 29.688 | 192 | 96 | 3 | 10 | 167 | 15 | 201 | 3.08e-20 | 85.1 |
| MS.gene061782.t1 | MTR_8g093740 | 40.952 | 105 | 60 | 2 | 31 | 133 | 34 | 138 | 7.44e-20 | 82.0 |
| MS.gene061782.t1 | MTR_1g029450 | 31.013 | 158 | 75 | 3 | 10 | 133 | 18 | 175 | 9.97e-20 | 82.8 |
| MS.gene061782.t1 | MTR_4g069850 | 30.732 | 205 | 93 | 7 | 11 | 174 | 10 | 206 | 2.01e-18 | 79.0 |
| MS.gene061782.t1 | MTR_4g012940 | 30.882 | 204 | 95 | 5 | 11 | 174 | 10 | 207 | 3.73e-18 | 78.2 |
| MS.gene061782.t1 | MTR_2g101890 | 29.902 | 204 | 97 | 5 | 11 | 174 | 12 | 209 | 9.15e-17 | 74.7 |
| MS.gene061782.t1 | MTR_8g092020 | 26.471 | 204 | 102 | 6 | 11 | 174 | 14 | 209 | 1.68e-15 | 71.2 |
| MS.gene061782.t1 | MTR_1g068730 | 30.159 | 126 | 55 | 1 | 11 | 103 | 17 | 142 | 2.64e-15 | 70.1 |
| MS.gene061782.t1 | MTR_1g097420 | 27.941 | 204 | 101 | 6 | 11 | 174 | 10 | 207 | 4.44e-15 | 70.1 |
| MS.gene061782.t1 | MTR_1g068740 | 31.148 | 122 | 51 | 1 | 11 | 99 | 17 | 138 | 8.99e-15 | 69.3 |
| MS.gene061782.t1 | MTR_2g005500 | 27.848 | 158 | 104 | 3 | 10 | 164 | 10 | 160 | 1.36e-13 | 65.5 |
| MS.gene061782.t1 | MTR_1g097420 | 30.573 | 157 | 96 | 5 | 25 | 174 | 84 | 234 | 1.68e-13 | 66.2 |
| MS.gene061782.t1 | MTR_4g113620 | 28.302 | 159 | 87 | 4 | 10 | 144 | 14 | 169 | 1.31e-12 | 63.5 |
| MS.gene061782.t1 | MTR_3g096350 | 32.800 | 125 | 50 | 3 | 10 | 100 | 13 | 137 | 1.65e-11 | 59.7 |
| MS.gene061782.t1 | MTR_3g078260 | 35.088 | 114 | 61 | 4 | 29 | 130 | 60 | 172 | 4.43e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061782.t1 | AT5G10260 | 71.981 | 207 | 25 | 1 | 1 | 174 | 1 | 207 | 3.18e-104 | 298 |
| MS.gene061782.t1 | AT2G22290 | 71.981 | 207 | 25 | 1 | 1 | 174 | 1 | 207 | 4.72e-104 | 297 |
| MS.gene061782.t1 | AT2G44610 | 69.712 | 208 | 29 | 2 | 1 | 174 | 1 | 208 | 1.69e-98 | 283 |
| MS.gene061782.t1 | AT4G39890 | 63.551 | 214 | 38 | 4 | 1 | 174 | 1 | 214 | 2.67e-84 | 247 |
| MS.gene061782.t1 | AT5G64990 | 63.819 | 199 | 38 | 2 | 10 | 174 | 8 | 206 | 1.56e-81 | 240 |
| MS.gene061782.t1 | AT5G64990 | 61.650 | 206 | 38 | 2 | 10 | 174 | 8 | 213 | 1.47e-80 | 238 |
| MS.gene061782.t1 | AT3G54840 | 39.024 | 164 | 66 | 1 | 9 | 138 | 33 | 196 | 4.45e-33 | 117 |
| MS.gene061782.t1 | AT4G19640 | 36.646 | 161 | 69 | 1 | 11 | 138 | 12 | 172 | 4.97e-33 | 116 |
| MS.gene061782.t1 | AT5G45130 | 36.646 | 161 | 69 | 1 | 11 | 138 | 12 | 172 | 9.18e-33 | 116 |
| MS.gene061782.t1 | AT3G54840 | 39.130 | 161 | 64 | 1 | 12 | 138 | 2 | 162 | 1.73e-32 | 114 |
| MS.gene061782.t1 | AT3G54840 | 39.103 | 156 | 61 | 1 | 9 | 130 | 33 | 188 | 5.07e-31 | 111 |
| MS.gene061782.t1 | AT5G45130 | 35.849 | 159 | 69 | 1 | 13 | 138 | 22 | 180 | 7.51e-31 | 111 |
| MS.gene061782.t1 | AT4G17170 | 30.542 | 203 | 101 | 3 | 10 | 172 | 7 | 209 | 2.95e-29 | 107 |
| MS.gene061782.t1 | AT3G11730 | 33.000 | 200 | 91 | 4 | 10 | 172 | 9 | 202 | 1.04e-27 | 103 |
| MS.gene061782.t1 | AT4G35860 | 36.129 | 155 | 92 | 3 | 25 | 172 | 9 | 163 | 1.18e-27 | 102 |
| MS.gene061782.t1 | AT4G35860 | 30.542 | 203 | 101 | 4 | 10 | 172 | 7 | 209 | 1.34e-27 | 103 |
| MS.gene061782.t1 | AT4G17160 | 29.048 | 210 | 102 | 3 | 4 | 172 | 1 | 204 | 1.52e-27 | 102 |
| MS.gene061782.t1 | AT5G03520 | 32.323 | 198 | 99 | 3 | 11 | 173 | 17 | 214 | 1.79e-27 | 102 |
| MS.gene061782.t1 | AT1G07410 | 32.919 | 161 | 75 | 1 | 10 | 137 | 13 | 173 | 2.82e-27 | 102 |
| MS.gene061782.t1 | AT1G05810 | 31.188 | 202 | 102 | 3 | 10 | 174 | 13 | 214 | 6.26e-27 | 101 |
| MS.gene061782.t1 | AT1G09630 | 32.704 | 159 | 74 | 1 | 10 | 135 | 13 | 171 | 7.66e-27 | 101 |
| MS.gene061782.t1 | AT2G31680 | 31.527 | 203 | 101 | 3 | 10 | 174 | 13 | 215 | 9.61e-27 | 101 |
| MS.gene061782.t1 | AT5G47520 | 31.068 | 206 | 100 | 5 | 10 | 173 | 15 | 220 | 1.02e-26 | 101 |
| MS.gene061782.t1 | AT1G05810 | 31.188 | 202 | 102 | 3 | 10 | 174 | 59 | 260 | 1.45e-26 | 101 |
| MS.gene061782.t1 | AT3G46830 | 32.484 | 157 | 73 | 1 | 10 | 133 | 13 | 169 | 1.67e-26 | 100 |
| MS.gene061782.t1 | AT3G46830 | 32.484 | 157 | 73 | 1 | 10 | 133 | 13 | 169 | 1.67e-26 | 100 |
| MS.gene061782.t1 | AT5G59150 | 32.484 | 157 | 73 | 1 | 10 | 133 | 13 | 169 | 3.64e-26 | 99.8 |
| MS.gene061782.t1 | AT5G03520 | 37.162 | 148 | 91 | 2 | 28 | 173 | 57 | 204 | 5.31e-26 | 99.0 |
| MS.gene061782.t1 | AT1G02130 | 33.540 | 161 | 74 | 1 | 10 | 137 | 9 | 169 | 6.34e-26 | 98.6 |
| MS.gene061782.t1 | AT5G65270 | 30.573 | 157 | 76 | 1 | 10 | 133 | 18 | 174 | 1.42e-25 | 98.2 |
| MS.gene061782.t1 | AT2G43130 | 30.500 | 200 | 101 | 3 | 10 | 172 | 13 | 211 | 3.75e-25 | 97.1 |
| MS.gene061782.t1 | AT3G53610 | 31.980 | 197 | 92 | 4 | 11 | 173 | 17 | 205 | 5.57e-25 | 96.7 |
| MS.gene061782.t1 | AT3G53610 | 31.980 | 197 | 92 | 4 | 11 | 173 | 17 | 205 | 5.57e-25 | 96.7 |
| MS.gene061782.t1 | AT3G53610 | 31.980 | 197 | 92 | 4 | 11 | 173 | 17 | 205 | 5.57e-25 | 96.7 |
| MS.gene061782.t1 | AT4G17530 | 30.653 | 199 | 97 | 3 | 10 | 173 | 9 | 201 | 6.43e-25 | 95.9 |
| MS.gene061782.t1 | AT5G47960 | 29.412 | 204 | 103 | 3 | 10 | 172 | 16 | 219 | 7.30e-25 | 96.3 |
| MS.gene061782.t1 | AT1G18200 | 33.766 | 154 | 69 | 1 | 10 | 130 | 14 | 167 | 7.30e-25 | 96.7 |
| MS.gene061782.t1 | AT3G15060 | 31.677 | 161 | 77 | 1 | 10 | 137 | 14 | 174 | 7.59e-25 | 96.3 |
| MS.gene061782.t1 | AT5G59840 | 32.653 | 196 | 89 | 5 | 11 | 171 | 17 | 204 | 7.83e-25 | 96.3 |
| MS.gene061782.t1 | AT5G47200 | 32.919 | 161 | 75 | 1 | 10 | 137 | 9 | 169 | 7.87e-25 | 95.9 |
| MS.gene061782.t1 | AT3G46060 | 32.821 | 195 | 88 | 5 | 11 | 170 | 17 | 203 | 1.03e-24 | 95.9 |
| MS.gene061782.t1 | AT3G46060 | 32.821 | 195 | 88 | 5 | 11 | 170 | 17 | 203 | 1.03e-24 | 95.9 |
| MS.gene061782.t1 | AT3G46060 | 32.821 | 195 | 88 | 5 | 11 | 170 | 17 | 203 | 1.03e-24 | 95.9 |
| MS.gene061782.t1 | AT1G73640 | 33.117 | 154 | 70 | 1 | 10 | 130 | 14 | 167 | 1.13e-24 | 96.3 |
| MS.gene061782.t1 | AT3G09900 | 32.512 | 203 | 94 | 4 | 11 | 173 | 17 | 216 | 1.16e-24 | 95.9 |
| MS.gene061782.t1 | AT3G12160 | 31.527 | 203 | 99 | 4 | 10 | 172 | 16 | 218 | 3.06e-24 | 94.7 |
| MS.gene061782.t1 | AT4G18430 | 29.082 | 196 | 88 | 2 | 10 | 154 | 14 | 209 | 3.23e-24 | 94.4 |
| MS.gene061782.t1 | AT4G39990 | 29.193 | 161 | 81 | 1 | 10 | 137 | 18 | 178 | 3.48e-24 | 94.7 |
| MS.gene061782.t1 | AT5G59150 | 37.931 | 116 | 71 | 1 | 18 | 133 | 4 | 118 | 6.44e-24 | 92.4 |
| MS.gene061782.t1 | AT3G07410 | 33.766 | 154 | 69 | 1 | 10 | 130 | 13 | 166 | 7.72e-24 | 93.6 |
| MS.gene061782.t1 | AT5G60860 | 28.497 | 193 | 87 | 2 | 10 | 151 | 14 | 206 | 1.21e-23 | 93.2 |
| MS.gene061782.t1 | AT5G03530 | 32.673 | 202 | 93 | 7 | 10 | 173 | 14 | 210 | 2.28e-23 | 92.0 |
| MS.gene061782.t1 | AT5G03530 | 32.673 | 202 | 93 | 7 | 10 | 173 | 14 | 210 | 2.28e-23 | 92.0 |
| MS.gene061782.t1 | AT1G28550 | 31.210 | 157 | 75 | 1 | 10 | 133 | 14 | 170 | 2.79e-23 | 92.0 |
| MS.gene061782.t1 | AT1G16920 | 28.571 | 161 | 82 | 1 | 10 | 137 | 14 | 174 | 3.45e-23 | 91.7 |
| MS.gene061782.t1 | AT1G01200 | 30.952 | 210 | 99 | 6 | 10 | 174 | 29 | 237 | 1.72e-22 | 90.5 |
| MS.gene061782.t1 | AT4G19640 | 34.921 | 126 | 49 | 1 | 11 | 103 | 12 | 137 | 5.66e-22 | 87.0 |
| MS.gene061782.t1 | AT5G45750 | 27.751 | 209 | 99 | 6 | 10 | 173 | 14 | 215 | 7.95e-22 | 88.2 |
| MS.gene061782.t1 | AT2G33870 | 29.814 | 161 | 80 | 1 | 10 | 137 | 14 | 174 | 1.10e-21 | 87.8 |
| MS.gene061782.t1 | AT1G06400 | 29.299 | 157 | 78 | 1 | 10 | 133 | 14 | 170 | 1.16e-21 | 87.8 |
| MS.gene061782.t1 | AT3G09910 | 40.000 | 145 | 78 | 5 | 31 | 173 | 67 | 204 | 1.48e-21 | 87.4 |
| MS.gene061782.t1 | AT3G09910 | 40.000 | 145 | 78 | 5 | 31 | 173 | 67 | 204 | 1.48e-21 | 87.4 |
| MS.gene061782.t1 | AT3G09910 | 40.000 | 145 | 78 | 5 | 31 | 173 | 67 | 204 | 1.48e-21 | 87.4 |
| MS.gene061782.t1 | AT4G18800 | 29.448 | 163 | 78 | 3 | 10 | 137 | 14 | 174 | 2.20e-21 | 87.0 |
| MS.gene061782.t1 | AT4G19640 | 34.307 | 137 | 53 | 2 | 11 | 114 | 12 | 144 | 2.61e-21 | 86.3 |
| MS.gene061782.t1 | AT1G43890 | 33.333 | 171 | 78 | 4 | 10 | 146 | 14 | 182 | 5.02e-21 | 86.3 |
| MS.gene061782.t1 | AT1G43890 | 33.333 | 171 | 78 | 4 | 10 | 146 | 14 | 182 | 5.02e-21 | 86.3 |
| MS.gene061782.t1 | AT1G43890 | 33.333 | 171 | 78 | 4 | 10 | 146 | 14 | 182 | 5.02e-21 | 86.3 |
| MS.gene061782.t1 | AT3G09910 | 43.396 | 106 | 58 | 2 | 31 | 134 | 67 | 172 | 9.64e-21 | 85.1 |
| MS.gene061782.t1 | AT3G09910 | 43.396 | 106 | 58 | 2 | 31 | 134 | 67 | 172 | 9.64e-21 | 85.1 |
| MS.gene061782.t1 | AT3G18820 | 31.220 | 205 | 92 | 7 | 11 | 174 | 10 | 206 | 5.20e-19 | 80.5 |
| MS.gene061782.t1 | AT1G52280 | 31.373 | 204 | 93 | 5 | 11 | 174 | 10 | 206 | 1.34e-18 | 79.7 |
| MS.gene061782.t1 | AT5G39620 | 30.918 | 207 | 95 | 7 | 9 | 174 | 5 | 204 | 5.39e-18 | 77.8 |
| MS.gene061782.t1 | AT4G09720 | 29.902 | 204 | 96 | 7 | 11 | 174 | 10 | 206 | 6.78e-17 | 75.1 |
| MS.gene061782.t1 | AT4G09720 | 32.716 | 162 | 95 | 6 | 20 | 174 | 18 | 172 | 7.00e-17 | 74.3 |
| MS.gene061782.t1 | AT4G09720 | 32.716 | 162 | 95 | 6 | 20 | 174 | 18 | 172 | 7.00e-17 | 74.3 |
| MS.gene061782.t1 | AT4G09720 | 32.716 | 162 | 95 | 6 | 20 | 174 | 18 | 172 | 7.00e-17 | 74.3 |
| MS.gene061782.t1 | AT3G16100 | 31.373 | 204 | 93 | 5 | 11 | 174 | 10 | 206 | 7.45e-17 | 75.1 |
| MS.gene061782.t1 | AT1G22740 | 27.941 | 204 | 97 | 7 | 11 | 174 | 10 | 203 | 2.59e-15 | 70.9 |
| MS.gene061782.t1 | AT1G49300 | 30.732 | 205 | 93 | 8 | 11 | 174 | 10 | 206 | 3.11e-15 | 70.5 |
| MS.gene061782.t1 | AT1G49300 | 30.732 | 205 | 93 | 8 | 11 | 174 | 10 | 206 | 3.11e-15 | 70.5 |
| MS.gene061782.t1 | AT4G09720 | 28.708 | 209 | 97 | 7 | 11 | 174 | 10 | 211 | 3.56e-15 | 70.5 |
| MS.gene061782.t1 | AT2G21880 | 29.858 | 211 | 92 | 7 | 11 | 174 | 11 | 212 | 4.59e-15 | 70.5 |
| MS.gene061782.t1 | AT5G46025 | 36.782 | 87 | 54 | 1 | 52 | 137 | 20 | 106 | 8.57e-15 | 67.4 |
| MS.gene061782.t1 | AT2G21880 | 32.544 | 169 | 91 | 6 | 20 | 174 | 28 | 187 | 1.54e-14 | 68.6 |
| MS.gene061782.t1 | AT2G21880 | 32.544 | 169 | 91 | 6 | 20 | 174 | 28 | 187 | 1.54e-14 | 68.6 |
| MS.gene061782.t1 | AT4G09720 | 27.907 | 215 | 97 | 7 | 11 | 174 | 10 | 217 | 1.94e-14 | 68.6 |
| MS.gene061782.t1 | AT5G55080 | 26.901 | 171 | 89 | 4 | 7 | 144 | 11 | 178 | 1.19e-13 | 66.6 |
| MS.gene061782.t1 | AT5G20010 | 27.083 | 192 | 100 | 5 | 10 | 168 | 14 | 198 | 3.77e-13 | 65.5 |
| MS.gene061782.t1 | AT5G20020 | 27.083 | 192 | 100 | 5 | 10 | 168 | 14 | 198 | 6.34e-13 | 64.7 |
| MS.gene061782.t1 | AT2G44690 | 35.965 | 114 | 60 | 4 | 29 | 130 | 70 | 182 | 7.10e-12 | 61.6 |
| MS.gene061782.t1 | AT2G21880 | 28.079 | 203 | 98 | 7 | 11 | 174 | 11 | 204 | 2.97e-11 | 60.1 |
Find 41 sgRNAs with CRISPR-Local
Find 120 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAGAAAACGAGCTTGTATT+TGG | 0.223259 | 4.3:-10138667 | None:intergenic |
| AACCCTTTCTTCTACAAATA+AGG | 0.224029 | 4.3:+10140747 | MS.gene061782:CDS |
| TGAGACTTCTAAATCTTTCT+TGG | 0.265565 | 4.3:-10139654 | None:intergenic |
| TCCTCCCTGCTGCTCTGTAT+TGG | 0.354070 | 4.3:-10140812 | None:intergenic |
| CTTCCTTATTTGTAGAAGAA+AGG | 0.383495 | 4.3:-10140750 | None:intergenic |
| GAGGAGGTTGCTCATGTTAG+AGG | 0.391358 | 4.3:+10140830 | MS.gene061782:CDS |
| AAGATTGCTTCCGCCTTGCC+AGG | 0.393556 | 4.3:+10140718 | MS.gene061782:CDS |
| GATGCCAAGTCAAAAGAGTT+TGG | 0.394493 | 4.3:+10140375 | MS.gene061782:CDS |
| CATGAAGCGGGTGATGATAC+TGG | 0.410880 | 4.3:-10138712 | None:intergenic |
| GAAGAAAGGGTTTCCATCCC+TGG | 0.417515 | 4.3:-10140736 | None:intergenic |
| TTCCTTATTTGTAGAAGAAA+GGG | 0.422408 | 4.3:-10140749 | None:intergenic |
| GAAGAATCTCTTATGTAGCT+TGG | 0.431932 | 4.3:-10139679 | None:intergenic |
| TGCTTCCGCCTTGCCAGGGA+TGG | 0.448090 | 4.3:+10140723 | MS.gene061782:CDS |
| TTCATCCAATACAGAGCAGC+AGG | 0.451660 | 4.3:+10140807 | MS.gene061782:CDS |
| AAACTGATCTTGTCGAGAAA+AGG | 0.473751 | 4.3:+10140008 | MS.gene061782:CDS |
| TTCTTAGGCGATCAATCCGT+TGG | 0.478079 | 4.3:+10138684 | MS.gene061782:CDS |
| AGGCAAGTTTCTATAGAAGA+AGG | 0.486341 | 4.3:+10140351 | MS.gene061782:intron |
| GATGTTATAATTGTCTTGGT+TGG | 0.487954 | 4.3:+10139980 | MS.gene061782:CDS |
| TAGTGATGTTATAATTGTCT+TGG | 0.496039 | 4.3:+10139976 | MS.gene061782:CDS |
| ATCGAAACCAGTGCAAAAGC+AGG | 0.513342 | 4.3:+10140408 | MS.gene061782:CDS |
| AATACAGAGCAGCAGGGAGG+AGG | 0.528419 | 4.3:+10140814 | MS.gene061782:CDS |
| GTATTGGATGAATGCACTGT+GGG | 0.529684 | 4.3:-10140796 | None:intergenic |
| TTAACTTTCAGGGATACTGC+AGG | 0.536162 | 4.3:+10139631 | MS.gene061782:intron |
| AAAAGCAGGCTTCAATATCA+AGG | 0.552081 | 4.3:+10140422 | MS.gene061782:CDS |
| CACTAACAAGTGGGTTGAGG+AGG | 0.553351 | 4.3:+10139937 | MS.gene061782:CDS |
| GAACACTAACAAGTGGGTTG+AGG | 0.553502 | 4.3:+10139934 | MS.gene061782:CDS |
| GAATTTGTCGTACATGAAGC+GGG | 0.561469 | 4.3:-10138724 | None:intergenic |
| TTCTACAAATAAGGAAGACA+TGG | 0.563578 | 4.3:+10140756 | MS.gene061782:CDS |
| AGATTGCTTCCGCCTTGCCA+GGG | 0.573903 | 4.3:+10140719 | MS.gene061782:CDS |
| CGAATTTGTCGTACATGAAG+CGG | 0.587508 | 4.3:-10138725 | None:intergenic |
| AAGGGTTTCCATCCCTGGCA+AGG | 0.588850 | 4.3:-10140731 | None:intergenic |
| CATTTCTGAACACTAACAAG+TGG | 0.594464 | 4.3:+10139927 | MS.gene061782:CDS |
| ATTTCTCTCATAAATGGCGA+CGG | 0.612804 | 4.3:+10138632 | None:intergenic |
| ATTTCTGAACACTAACAAGT+GGG | 0.616106 | 4.3:+10139928 | MS.gene061782:CDS |
| GAAGCAATCTTACGAAACAA+AGG | 0.623923 | 4.3:-10140706 | None:intergenic |
| ACGAGCTTGTATTTGGCGAG+AGG | 0.624355 | 4.3:-10138660 | None:intergenic |
| GAGGAGGTGCGTCAAGAACG+TGG | 0.657614 | 4.3:+10139953 | MS.gene061782:CDS |
| TGTATTGGATGAATGCACTG+TGG | 0.660739 | 4.3:-10140797 | None:intergenic |
| TCCAATACAGAGCAGCAGGG+AGG | 0.703010 | 4.3:+10140811 | MS.gene061782:CDS |
| GGTTTCCATCCCTGGCAAGG+CGG | 0.703532 | 4.3:-10140728 | None:intergenic |
| TCATCCAATACAGAGCAGCA+GGG | 0.714266 | 4.3:+10140808 | MS.gene061782:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAATGTGATTTATTAA+GGG | - | chr4.3:10139005-10139024 | None:intergenic | 10.0% |
| !!! | TTAATAAATCACATTTTTAA+GGG | + | chr4.3:10139005-10139024 | MS.gene061782:intron | 10.0% |
| !! | AAATTTGATCATATAATTTC+AGG | + | chr4.3:10139400-10139419 | MS.gene061782:intron | 15.0% |
| !! | CTTAAAAATGTGATTTATTA+AGG | - | chr4.3:10139006-10139025 | None:intergenic | 15.0% |
| !! | GTTAATGAAATTAATTGAAT+TGG | - | chr4.3:10140261-10140280 | None:intergenic | 15.0% |
| !! | TATCGTTATTTAACTAAAAA+AGG | - | chr4.3:10139847-10139866 | None:intergenic | 15.0% |
| !! | TCAATTAATTTCATTAACAA+AGG | + | chr4.3:10140263-10140282 | MS.gene061782:intron | 15.0% |
| !!! | ACAATGAATTTTAAAAAAAC+TGG | - | chr4.3:10139059-10139078 | None:intergenic | 15.0% |
| !!! | CTTAATAAATCACATTTTTA+AGG | + | chr4.3:10139004-10139023 | MS.gene061782:intron | 15.0% |
| !!! | GTTTTTGTTTAATATCATAT+TGG | + | chr4.3:10140100-10140119 | MS.gene061782:intron | 15.0% |
| !!! | TGGTCTAATTATTTTTTATA+TGG | + | chr4.3:10140315-10140334 | MS.gene061782:intron | 15.0% |
| !! | AATTAATTGAATTGGCTATA+AGG | - | chr4.3:10140253-10140272 | None:intergenic | 20.0% |
| !! | AGGTTAATAACTATAAATTG+AGG | - | chr4.3:10139877-10139896 | None:intergenic | 20.0% |
| !! | ATGAATATATAGATCAAACT+CGG | - | chr4.3:10140048-10140067 | None:intergenic | 20.0% |
| !! | CAAAAAAATATAAATTGACG+AGG | - | chr4.3:10139508-10139527 | None:intergenic | 20.0% |
| !! | CAATCACATAAAAAATCATA+GGG | - | chr4.3:10138896-10138915 | None:intergenic | 20.0% |
| !! | TATTCGATGTAAAACAAAAT+AGG | - | chr4.3:10140593-10140612 | None:intergenic | 20.0% |
| !! | TCAGAAATAGTAAAAAGAAA+AGG | - | chr4.3:10139599-10139618 | None:intergenic | 20.0% |
| !! | TTCCAACATCATATAATAAA+TGG | + | chr4.3:10139303-10139322 | MS.gene061782:intron | 20.0% |
| !!! | AATTCTGATGATTTTTTAAG+AGG | + | chr4.3:10139200-10139219 | MS.gene061782:intron | 20.0% |
| !!! | GCTTTTATGTTAGAATATTA+TGG | + | chr4.3:10139222-10139241 | MS.gene061782:intron | 20.0% |
| !!! | TTAGTGTATTTTAACTTTCA+GGG | + | chr4.3:10139621-10139640 | MS.gene061782:intron | 20.0% |
| ! | AGATGATGCATTATGATTTA+TGG | + | chr4.3:10139550-10139569 | MS.gene061782:intron | 25.0% |
| ! | AGATTGATCATTCAAGAATT+AGG | + | chr4.3:10139080-10139099 | MS.gene061782:intron | 25.0% |
| ! | ATATAATTTCAGGCTACTAT+CGG | + | chr4.3:10139410-10139429 | MS.gene061782:intron | 25.0% |
| ! | CAACATCATATAATAAATGG+AGG | + | chr4.3:10139306-10139325 | MS.gene061782:intron | 25.0% |
| ! | CCAATCACATAAAAAATCAT+AGG | - | chr4.3:10138897-10138916 | None:intergenic | 25.0% |
| ! | CTCCATTTATTATATGATGT+TGG | - | chr4.3:10139308-10139327 | None:intergenic | 25.0% |
| ! | TAGCAAAATTACAAAGAACA+TGG | - | chr4.3:10140201-10140220 | None:intergenic | 25.0% |
| ! | TAGTGATGTTATAATTGTCT+TGG | + | chr4.3:10139976-10139995 | MS.gene061782:CDS | 25.0% |
| ! | TCTATATATTCATTCACAAC+CGG | + | chr4.3:10140055-10140074 | MS.gene061782:intron | 25.0% |
| ! | TTAGATGTGAAAGTTAGTAA+AGG | - | chr4.3:10140561-10140580 | None:intergenic | 25.0% |
| ! | TTTCAAATATTGCGATGTTA+TGG | + | chr4.3:10140295-10140314 | MS.gene061782:intron | 25.0% |
| !! | AATGAATTTTCATAGTTGCT+TGG | + | chr4.3:10140453-10140472 | MS.gene061782:intron | 25.0% |
| !! | ATGAATTTTCATAGTTGCTT+GGG | + | chr4.3:10140454-10140473 | MS.gene061782:intron | 25.0% |
| !! | TTCCTTATTTGTAGAAGAAA+GGG | - | chr4.3:10140752-10140771 | None:intergenic | 25.0% |
| !! | TTCTCAATTTCAATTTTGCA+TGG | + | chr4.3:10138783-10138802 | MS.gene061782:intron | 25.0% |
| !!! | CCTATGATTTTTTATGTGAT+TGG | + | chr4.3:10138894-10138913 | MS.gene061782:intron | 25.0% |
| !!! | CTTAGTGTATTTTAACTTTC+AGG | + | chr4.3:10139620-10139639 | MS.gene061782:intron | 25.0% |
| !!! | CTTTGTAATTTTGCTATGAT+AGG | + | chr4.3:10140205-10140224 | MS.gene061782:intron | 25.0% |
| AACCCTTTCTTCTACAAATA+AGG | + | chr4.3:10140747-10140766 | MS.gene061782:CDS | 30.0% | |
| AATGAAGAATTGAACCTGAT+AGG | - | chr4.3:10138757-10138776 | None:intergenic | 30.0% | |
| ATTTCTGAACACTAACAAGT+GGG | + | chr4.3:10139928-10139947 | MS.gene061782:CDS | 30.0% | |
| GATGTTATAATTGTCTTGGT+TGG | + | chr4.3:10139980-10139999 | MS.gene061782:CDS | 30.0% | |
| TAAGAAAACGAGCTTGTATT+TGG | - | chr4.3:10138670-10138689 | None:intergenic | 30.0% | |
| TACATTAGAACAGCTTACTT+AGG | - | chr4.3:10139897-10139916 | None:intergenic | 30.0% | |
| TATGTGTTTGCATTTGAATC+TGG | + | chr4.3:10139797-10139816 | MS.gene061782:intron | 30.0% | |
| TGAAACAAAAAACACCTACA+CGG | - | chr4.3:10139576-10139595 | None:intergenic | 30.0% | |
| TGAGACTTCTAAATCTTTCT+TGG | - | chr4.3:10139657-10139676 | None:intergenic | 30.0% | |
| TTCTACAAATAAGGAAGACA+TGG | + | chr4.3:10140756-10140775 | MS.gene061782:CDS | 30.0% | |
| ! | AAATACAAGCTCGTTTTCTT+AGG | + | chr4.3:10138669-10138688 | MS.gene061782:CDS | 30.0% |
| ! | CTTCCTTATTTGTAGAAGAA+AGG | - | chr4.3:10140753-10140772 | None:intergenic | 30.0% |
| ! | TCATTCATAAGTCACTTTCA+AGG | + | chr4.3:10139164-10139183 | MS.gene061782:intron | 30.0% |
| !! | AAGTTGATGAATTAGGACTT+TGG | + | chr4.3:10138948-10138967 | MS.gene061782:intron | 30.0% |
| !! | TGATCACAAGTTGATGAATT+AGG | + | chr4.3:10138941-10138960 | MS.gene061782:intron | 30.0% |
| !!! | TTATTTTTTATATGGCCGCT+TGG | + | chr4.3:10140323-10140342 | MS.gene061782:intron | 30.0% |
| AAAAGCAGGCTTCAATATCA+AGG | + | chr4.3:10140422-10140441 | MS.gene061782:CDS | 35.0% | |
| AAACTGATCTTGTCGAGAAA+AGG | + | chr4.3:10140008-10140027 | MS.gene061782:CDS | 35.0% | |
| AACGAACAGTTCTATCTTCA+AGG | - | chr4.3:10139463-10139482 | None:intergenic | 35.0% | |
| AATTAGGACTTTGGACGATT+AGG | + | chr4.3:10138957-10138976 | MS.gene061782:intron | 35.0% | |
| AGGCAAGTTTCTATAGAAGA+AGG | + | chr4.3:10140351-10140370 | MS.gene061782:intron | 35.0% | |
| ATTATGATTTATGGCCGTGT+AGG | + | chr4.3:10139559-10139578 | MS.gene061782:intron | 35.0% | |
| CATTTCTGAACACTAACAAG+TGG | + | chr4.3:10139927-10139946 | MS.gene061782:CDS | 35.0% | |
| GAAGAATCTCTTATGTAGCT+TGG | - | chr4.3:10139682-10139701 | None:intergenic | 35.0% | |
| GAAGCAATCTTACGAAACAA+AGG | - | chr4.3:10140709-10140728 | None:intergenic | 35.0% | |
| GGTTTCAACGACTCAAATTA+TGG | - | chr4.3:10139108-10139127 | None:intergenic | 35.0% | |
| GTTTATCTTCTTTCCCATGT+TGG | + | chr4.3:10140642-10140661 | MS.gene061782:intron | 35.0% | |
| TAAGCTGTTCTAATGTAGAC+AGG | + | chr4.3:10139900-10139919 | MS.gene061782:intron | 35.0% | |
| TAGCAATCTAGCAACATAGA+GGG | - | chr4.3:10139375-10139394 | None:intergenic | 35.0% | |
| TTAGCAATCTAGCAACATAG+AGG | - | chr4.3:10139376-10139395 | None:intergenic | 35.0% | |
| ! | TGCATTGACAGATAACAATG+AGG | - | chr4.3:10140677-10140696 | None:intergenic | 35.0% |
| !! | GATTCCAAACTCTTTTGACT+TGG | - | chr4.3:10140382-10140401 | None:intergenic | 35.0% |
| AAACTTGCCTGTAAACCAAG+CGG | - | chr4.3:10140341-10140360 | None:intergenic | 40.0% | |
| AGCAATCTAGCAACATAGAG+GGG | - | chr4.3:10139374-10139393 | None:intergenic | 40.0% | |
| AGTCGTTGAAACCCTTGAAT+GGG | + | chr4.3:10139115-10139134 | MS.gene061782:intron | 40.0% | |
| ATGGTGCAATTTCTGCTTAG+TGG | + | chr4.3:10139241-10139260 | MS.gene061782:intron | 40.0% | |
| CAAATTCGATACCACCTATC+AGG | + | chr4.3:10138740-10138759 | MS.gene061782:intron | 40.0% | |
| CGAATTTGTCGTACATGAAG+CGG | - | chr4.3:10138728-10138747 | None:intergenic | 40.0% | |
| GAACTCTTCTTCCCATTCAA+GGG | - | chr4.3:10139129-10139148 | None:intergenic | 40.0% | |
| GAAGAATTGAACCTGATAGG+TGG | - | chr4.3:10138754-10138773 | None:intergenic | 40.0% | |
| GAATTTGTCGTACATGAAGC+GGG | - | chr4.3:10138727-10138746 | None:intergenic | 40.0% | |
| GATCACATGCATCATAGTTG+AGG | - | chr4.3:10140504-10140523 | None:intergenic | 40.0% | |
| GATGCCAAGTCAAAAGAGTT+TGG | + | chr4.3:10140375-10140394 | MS.gene061782:CDS | 40.0% | |
| GTATTGGATGAATGCACTGT+GGG | - | chr4.3:10140799-10140818 | None:intergenic | 40.0% | |
| TGTATTGGATGAATGCACTG+TGG | - | chr4.3:10140800-10140819 | None:intergenic | 40.0% | |
| TTAACTTTCAGGGATACTGC+AGG | + | chr4.3:10139631-10139650 | MS.gene061782:intron | 40.0% | |
| ! | TCTGCTTAGTGGATAAAGCT+TGG | + | chr4.3:10139252-10139271 | MS.gene061782:intron | 40.0% |
| !!! | GATGATACTGGTTTTGCCAA+CGG | - | chr4.3:10138703-10138722 | None:intergenic | 40.0% |
| ACCATACCCAGTCAGAAAAC+CGG | - | chr4.3:10140077-10140096 | None:intergenic | 45.0% | |
| ATAGGTCAAGTGTCTTGCAG+TGG | + | chr4.3:10140223-10140242 | MS.gene061782:intron | 45.0% | |
| ATCGAAACCAGTGCAAAAGC+AGG | + | chr4.3:10140408-10140427 | MS.gene061782:CDS | 45.0% | |
| CAGGCTTCAATATCAAGGTC+AGG | + | chr4.3:10140427-10140446 | MS.gene061782:intron | 45.0% | |
| CGAACTCTTCTTCCCATTCA+AGG | - | chr4.3:10139130-10139149 | None:intergenic | 45.0% | |
| GAACTGTTCGTTTGCAGCTT+TGG | + | chr4.3:10139471-10139490 | MS.gene061782:intron | 45.0% | |
| GAGGACACAAGAACCAACAT+GGG | - | chr4.3:10140658-10140677 | None:intergenic | 45.0% | |
| GAGTCGTTGAAACCCTTGAA+TGG | + | chr4.3:10139114-10139133 | MS.gene061782:intron | 45.0% | |
| GCAATCTAGCAACATAGAGG+GGG | - | chr4.3:10139373-10139392 | None:intergenic | 45.0% | |
| TATATGGCCGCTTGGTTTAC+AGG | + | chr4.3:10140331-10140350 | MS.gene061782:intron | 45.0% | |
| TCATCCAATACAGAGCAGCA+GGG | + | chr4.3:10140808-10140827 | MS.gene061782:CDS | 45.0% | |
| TGAGGACACAAGAACCAACA+TGG | - | chr4.3:10140659-10140678 | None:intergenic | 45.0% | |
| TTCATCCAATACAGAGCAGC+AGG | + | chr4.3:10140807-10140826 | MS.gene061782:CDS | 45.0% | |
| TTCTTAGGCGATCAATCCGT+TGG | + | chr4.3:10138684-10138703 | MS.gene061782:CDS | 45.0% | |
| !! | ATTGAAGCCTGCTTTTGCAC+TGG | - | chr4.3:10140418-10140437 | None:intergenic | 45.0% |
| !! | GAACACTAACAAGTGGGTTG+AGG | + | chr4.3:10139934-10139953 | MS.gene061782:CDS | 45.0% |
| !! | TCACAACCGGTTTTCTGACT+GGG | + | chr4.3:10140068-10140087 | MS.gene061782:intron | 45.0% |
| !! | TTCACAACCGGTTTTCTGAC+TGG | + | chr4.3:10140067-10140086 | MS.gene061782:intron | 45.0% |
| ACGAGCTTGTATTTGGCGAG+AGG | - | chr4.3:10138663-10138682 | None:intergenic | 50.0% | |
| CATGAAGCGGGTGATGATAC+TGG | - | chr4.3:10138715-10138734 | None:intergenic | 50.0% | |
| GAAGAAAGGGTTTCCATCCC+TGG | - | chr4.3:10140739-10140758 | None:intergenic | 50.0% | |
| !! | ACCGGTTTTCTGACTGGGTA+TGG | + | chr4.3:10140073-10140092 | MS.gene061782:intron | 50.0% |
| !! | CACTAACAAGTGGGTTGAGG+AGG | + | chr4.3:10139937-10139956 | MS.gene061782:CDS | 50.0% |
| AAGATTGCTTCCGCCTTGCC+AGG | + | chr4.3:10140718-10140737 | MS.gene061782:CDS | 55.0% | |
| AAGGGTTTCCATCCCTGGCA+AGG | - | chr4.3:10140734-10140753 | None:intergenic | 55.0% | |
| AATACAGAGCAGCAGGGAGG+AGG | + | chr4.3:10140814-10140833 | MS.gene061782:CDS | 55.0% | |
| AGATTGCTTCCGCCTTGCCA+GGG | + | chr4.3:10140719-10140738 | MS.gene061782:CDS | 55.0% | |
| TCCAATACAGAGCAGCAGGG+AGG | + | chr4.3:10140811-10140830 | MS.gene061782:CDS | 55.0% | |
| TCCTCCCTGCTGCTCTGTAT+TGG | - | chr4.3:10140815-10140834 | None:intergenic | 55.0% | |
| GGTTTCCATCCCTGGCAAGG+CGG | - | chr4.3:10140731-10140750 | None:intergenic | 60.0% | |
| ! | GAGGAGGTGCGTCAAGAACG+TGG | + | chr4.3:10139953-10139972 | MS.gene061782:CDS | 60.0% |
| TGCTTCCGCCTTGCCAGGGA+TGG | + | chr4.3:10140723-10140742 | MS.gene061782:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 10138645 | 10140849 | 10138645 | ID=MS.gene061782 |
| chr4.3 | mRNA | 10138645 | 10140849 | 10138645 | ID=MS.gene061782.t1;Parent=MS.gene061782 |
| chr4.3 | exon | 10138645 | 10138733 | 10138645 | ID=MS.gene061782.t1.exon1;Parent=MS.gene061782.t1 |
| chr4.3 | CDS | 10138645 | 10138733 | 10138645 | ID=cds.MS.gene061782.t1;Parent=MS.gene061782.t1 |
| chr4.3 | exon | 10139642 | 10139730 | 10139642 | ID=MS.gene061782.t1.exon2;Parent=MS.gene061782.t1 |
| chr4.3 | CDS | 10139642 | 10139730 | 10139642 | ID=cds.MS.gene061782.t1;Parent=MS.gene061782.t1 |
| chr4.3 | exon | 10139918 | 10140029 | 10139918 | ID=MS.gene061782.t1.exon3;Parent=MS.gene061782.t1 |
| chr4.3 | CDS | 10139918 | 10140029 | 10139918 | ID=cds.MS.gene061782.t1;Parent=MS.gene061782.t1 |
| chr4.3 | exon | 10140353 | 10140443 | 10140353 | ID=MS.gene061782.t1.exon4;Parent=MS.gene061782.t1 |
| chr4.3 | CDS | 10140353 | 10140443 | 10140353 | ID=cds.MS.gene061782.t1;Parent=MS.gene061782.t1 |
| chr4.3 | exon | 10140706 | 10140849 | 10140706 | ID=MS.gene061782.t1.exon5;Parent=MS.gene061782.t1 |
| chr4.3 | CDS | 10140706 | 10140849 | 10140706 | ID=cds.MS.gene061782.t1;Parent=MS.gene061782.t1 |
| Gene Sequence |
| Protein sequence |
