AlfalfaGEDB | MS.gene20239

M. sativa cultivar XinJiangDaYe / MS.gene20239

KEGG: K02728
GO: GO:0003674 GO:0003824 GO:0004175 GO:0004298 GO:0005575 GO:0005839 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0009987 GO:0016787 GO:0019538 GO:0019773 GO:0019941 GO:0032991 GO:0043170 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0051603 GO:0070003 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901575
PFAM: PF00227.29 PF10584.12

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene20239.t1	XP_003611674.1	100	250	0	0	1	250	1	250	1.10E-134	489.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene20239.t1	P52427	90.0	250	25	0	1	250	1	250	8.3e-126	451.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene20239.t1	G7K595	100.0	250	0	0	1	250	1	250	8.3e-135	489.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene051756	MS.gene20239	0.813943	1.98E-51	-1.69E-46
MS.gene053952	MS.gene20239	0.803113	4.07E-49	-1.69E-46
MS.gene057094	MS.gene20239	0.813752	2.18E-51	-1.69E-46
MS.gene061145	MS.gene20239	0.800539	1.37E-48	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene20239	MS.gene40486	PPI
MS.gene20239	MS.gene89677	PPI
MS.gene20239	MS.gene066737	PPI
MS.gene20239	MS.gene29256	PPI
MS.gene20239	MS.gene071345	PPI
MS.gene20239	MS.gene84459	PPI
MS.gene20239	MS.gene039040	PPI
MS.gene20239	MS.gene74962	PPI
MS.gene20239	MS.gene27289	PPI
MS.gene20239	MS.gene017616	PPI
MS.gene20239	MS.gene074061	PPI
MS.gene20239	MS.gene029314	PPI
MS.gene20239	MS.gene024828	PPI
MS.gene20239	MS.gene26985	PPI
MS.gene20239	MS.gene92186	PPI
MS.gene20239	MS.gene24252	PPI
MS.gene29256	MS.gene20239	PPI
MS.gene20239	MS.gene76217	PPI
MS.gene20239	MS.gene21169	PPI
MS.gene20239	MS.gene025808	PPI
MS.gene20239	MS.gene27247	PPI
MS.gene20239	MS.gene045566	PPI
MS.gene20239	MS.gene21801	PPI
MS.gene20239	MS.gene006641	PPI
MS.gene20239	MS.gene64609	PPI
MS.gene20239	MS.gene070615	PPI
MS.gene20239	MS.gene09974	PPI
MS.gene20239	MS.gene77139	PPI
MS.gene20239	MS.gene074000	PPI
MS.gene20239	MS.gene043801	PPI
MS.gene24255	MS.gene20239	PPI
MS.gene20239	MS.gene065045	PPI
MS.gene20239	MS.gene74417	PPI
MS.gene20239	MS.gene24255	PPI
MS.gene20239	MS.gene058061	PPI
MS.gene20239	MS.gene48062	PPI
MS.gene20239	MS.gene90698	PPI
MS.gene20239	MS.gene63845	PPI
MS.gene20239	MS.gene071304	PPI
MS.gene20239	MS.gene066738	PPI
MS.gene20239	MS.gene29922	PPI
MS.gene20239	MS.gene55530	PPI
MS.gene20239	MS.gene44226	PPI
MS.gene20239	MS.gene012131	PPI
MS.gene20239	MS.gene24253	PPI
MS.gene20239	MS.gene47175	PPI
MS.gene29922	MS.gene20239	PPI
MS.gene20239	MS.gene046093	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene20239.t1	MTR_5g016590	100.000	250	0	0	1	250	1	250	0.0	518
MS.gene20239.t1	MTR_7g070070	98.000	250	5	0	1	250	1	250	0.0	509
MS.gene20239.t1	MTR_1g112250	42.324	241	121	7	5	239	8	236	6.23e-59	187
MS.gene20239.t1	MTR_8g075320	42.500	200	112	3	4	202	3	200	4.37e-53	172
MS.gene20239.t1	MTR_2g016050	41.500	200	114	3	4	202	3	200	9.18e-51	166
MS.gene20239.t1	MTR_0167s0060	36.325	234	142	4	4	237	5	231	4.41e-48	159
MS.gene20239.t1	MTR_1g022410	38.785	214	125	3	4	215	5	214	3.24e-43	148
MS.gene20239.t1	MTR_8g464460	41.709	199	112	3	5	200	9	206	3.24e-43	147
MS.gene20239.t1	MTR_2g060830	36.975	238	138	6	5	237	9	239	1.19e-40	140
MS.gene20239.t1	MTR_6g024135	35.071	211	135	2	5	215	8	216	2.11e-37	132
MS.gene20239.t1	MTR_4g012740	28.968	252	135	6	4	215	236	483	6.44e-22	94.7
MS.gene20239.t1	MTR_6g013300	32.821	195	112	8	33	220	138	320	1.09e-16	78.6
MS.gene20239.t1	MTR_4g057090	29.947	187	119	5	26	207	110	289	3.14e-14	71.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene20239.t1	AT3G22110	90.400	250	24	0	1	250	1	250	3.64e-173	477
MS.gene20239.t1	AT4G15165	72.000	250	28	1	1	250	1	208	3.76e-127	359
MS.gene20239.t1	AT3G14290	42.149	242	122	7	4	239	7	236	1.83e-59	188
MS.gene20239.t1	AT1G53850	41.322	242	124	7	4	239	7	236	1.17e-58	186
MS.gene20239.t1	AT1G53850	41.322	242	124	7	4	239	7	236	1.17e-58	186
MS.gene20239.t1	AT5G66140	42.000	200	113	3	4	202	3	200	1.78e-52	171
MS.gene20239.t1	AT3G51260	42.500	200	112	3	4	202	3	200	2.12e-52	171
MS.gene20239.t1	AT3G51260	42.500	200	112	3	4	202	3	200	2.31e-52	170
MS.gene20239.t1	AT1G16470	37.264	212	130	3	4	215	5	213	1.32e-46	155
MS.gene20239.t1	AT1G16470	37.264	212	130	3	4	215	5	213	1.32e-46	155
MS.gene20239.t1	AT1G79210	37.264	212	130	3	4	215	5	213	1.56e-46	155
MS.gene20239.t1	AT1G79210	37.264	212	130	3	4	215	5	213	1.56e-46	155
MS.gene20239.t1	AT1G79210	37.264	212	130	3	4	215	5	213	1.56e-46	155
MS.gene20239.t1	AT5G42790	39.320	206	119	3	4	207	5	206	5.65e-44	150
MS.gene20239.t1	AT1G47250	38.350	206	121	3	4	207	5	206	3.06e-43	148
MS.gene20239.t1	AT5G35590	40.201	199	115	3	5	200	9	206	2.10e-41	142
MS.gene20239.t1	AT2G05840	37.688	199	120	3	5	200	9	206	5.22e-38	132
MS.gene20239.t1	AT2G05840	37.688	199	120	3	5	200	9	206	5.93e-38	133
MS.gene20239.t1	AT2G05840	37.745	204	116	4	5	205	9	204	3.34e-37	130
MS.gene20239.t1	AT2G27020	32.314	229	150	4	5	233	8	231	2.77e-36	129
MS.gene20239.t1	AT2G27020	32.314	229	150	4	5	233	110	333	3.24e-35	129

Find 75 sgRNAs with CRISPR-Local

Find 77 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGAGTCTCTTTCCTGTTTGC+AGG	0.211747	5.1:+8751831	MS.gene20239:CDS
CTCTTTCCTGTTTGCAGGAT+GGG	0.248276	5.1:+8751836	MS.gene20239:CDS
ACTAAGCTGTTGGTGAAGTC+TGG	0.280754	5.1:+8752140	MS.gene20239:CDS
CATGTTGCATGTGCTGTTGC+TGG	0.302104	5.1:+8751651	MS.gene20239:CDS
AAGCAAGGTTACACACAATT+TGG	0.305332	5.1:+8751792	MS.gene20239:CDS
GGATCCTAGCAGTGTTGATT+AGG	0.325400	5.1:-8751695	None:intergenic
GTCGAAGGATGGGGTTGTTC+TGG	0.338789	5.1:+8751554	MS.gene20239:CDS
AGCAGTCTCTGTTGCTGGTT+GGG	0.364107	5.1:-8752168	None:intergenic
GAGGTGTTTCTTGCACCATC+TGG	0.378354	5.1:+8752080	MS.gene20239:CDS
GAAAGTTCTGAGCAAAACTA+TGG	0.379385	5.1:+8752019	MS.gene20239:CDS
AACAGCTTAGTCAAGTTCTC+TGG	0.381164	5.1:-8752128	None:intergenic
AGCTAAGCAGTCTCTGTTGC+TGG	0.412030	5.1:-8752173	None:intergenic
TTTGGTGGTCTCCGTCCGTT+TGG	0.423167	5.1:+8751810	MS.gene20239:CDS
GGTTGGAAAGCCGGTGCTAT+TGG	0.431124	5.1:+8751912	MS.gene20239:CDS
TGATTGTGCTGCCTGGTTGT+TGG	0.432231	5.1:-8751937	None:intergenic
AGCACAATCAATTCTAAAAC+AGG	0.435611	5.1:+8751950	MS.gene20239:CDS
GATTGAACCAACTGTTCAAC+AGG	0.438880	5.1:-8751756	None:intergenic
GTTCAACAGGCATTGGCTCT+TGG	0.441840	5.1:-8751743	None:intergenic
AACTATGGCGGTTGGAAAGC+CGG	0.449553	5.1:+8751903	MS.gene20239:CDS
CTAAGCTGTTGGTGAAGTCT+GGG	0.453484	5.1:+8752141	MS.gene20239:CDS
AGCGATCCTAGTGGAAACTA+TGG	0.459227	5.1:+8751888	MS.gene20239:CDS
TCTCTTTCCTGTTTGCAGGA+TGG	0.460327	5.1:+8751835	MS.gene20239:CDS
AAGCAGTCTCTGTTGCTGGT+TGG	0.471981	5.1:-8752169	None:intergenic
ATGTTGCATGTGCTGTTGCT+GGG	0.490338	5.1:+8751652	MS.gene20239:CDS
TGTTCTGGTTGGCGAAAAGA+AGG	0.492197	5.1:+8751569	MS.gene20239:CDS
TGCTCAGAACTTTCAGTGCA+AGG	0.496408	5.1:-8752010	None:intergenic
ACAGCTTAGTCAAGTTCTCT+GGG	0.496829	5.1:-8752127	None:intergenic
AGCAGTGTTGATTAGGATGT+TGG	0.496912	5.1:-8751688	None:intergenic
GCCAATGCCTGTTGAACAGT+TGG	0.499789	5.1:+8751749	MS.gene20239:CDS
TTAGAATTGATTGTGCTGCC+TGG	0.504956	5.1:-8751944	None:intergenic
AAGCTTATCCGAGGTAAGAC+TGG	0.507716	5.1:-8752048	None:intergenic
TGTTGAGGTTTGCAGAAGCT+TGG	0.509366	5.1:-8751598	None:intergenic
ACTTGGTAAAGACGTCCTTC+AGG	0.509793	5.1:-8751480	None:intergenic
CAACCGCCATAGTTTCCACT+AGG	0.512105	5.1:-8751894	None:intergenic
TAGGAATCTTGTCGAAGGAT+GGG	0.512721	5.1:+8751544	MS.gene20239:CDS
CAAATGAGTAACGTTGTGCT+TGG	0.513670	5.1:-8751716	None:intergenic
AAGGATGGGGTTGTTCTGGT+TGG	0.521102	5.1:+8751558	MS.gene20239:CDS
ACCAACTGTTCAACAGGCAT+TGG	0.523493	5.1:-8751750	None:intergenic
GGAAATGCTGGTACTGCCAT+AGG	0.528749	5.1:+8751525	MS.gene20239:CDS
ATAGGAATCTTGTCGAAGGA+TGG	0.537221	5.1:+8751543	MS.gene20239:CDS
TGCTATTGGTGCCAACAACC+AGG	0.540083	5.1:+8751926	MS.gene20239:CDS
CTAGTGGAAACTATGGCGGT+TGG	0.542853	5.1:+8751895	MS.gene20239:CDS
ATCCTTCGACAAGATTCCTA+TGG	0.544761	5.1:-8751541	None:intergenic
ATGGAGGCCATTGGAAATGC+TGG	0.546199	5.1:+8751513	MS.gene20239:CDS
AAATTGTGTGTAACCTTGCT+TGG	0.550671	5.1:-8751790	None:intergenic
CCTCCATTGCATACTCCACT+TGG	0.550938	5.1:-8751497	None:intergenic
AATTCTAAAACAGGACTACA+AGG	0.553479	5.1:+8751959	MS.gene20239:CDS
AGGAATCTTGTCGAAGGATG+GGG	0.558136	5.1:+8751545	MS.gene20239:CDS
ACATCCTAATCAACACTGCT+AGG	0.565540	5.1:+8751691	MS.gene20239:CDS
CAAGGTTACACACAATTTGG+TGG	0.565666	5.1:+8751795	MS.gene20239:CDS
GTTGTTGGCACCAATAGCAC+CGG	0.570780	5.1:-8751922	None:intergenic
GTTTCTTGCACCATCTGGAA+AGG	0.578192	5.1:+8752085	MS.gene20239:CDS
GTTGATTAGGATGTTGGCAT+CGG	0.579727	5.1:-8751682	None:intergenic
AACAGGAAAGAGACTCCAAA+CGG	0.582222	5.1:-8751825	None:intergenic
CAGGAGAGAAGATTGTTGTA+CGG	0.584834	5.1:-8751461	None:intergenic
CCAAGTGGAGTATGCAATGG+AGG	0.586792	5.1:+8751497	MS.gene20239:CDS
GAGTATGCAATGGAGGCCAT+TGG	0.587807	5.1:+8751504	MS.gene20239:CDS
AGAGAACTTGACTAAGCTGT+TGG	0.594383	5.1:+8752130	MS.gene20239:CDS
ACAACAATCTTCTCTCCTGA+AGG	0.598896	5.1:+8751465	MS.gene20239:CDS
TTACCAAGTGGAGTATGCAA+TGG	0.599728	5.1:+8751494	MS.gene20239:CDS
TCTCTTTGTGATACCAAGCA+AGG	0.600349	5.1:+8751777	MS.gene20239:CDS
GGAAAGAGACTCCAAACGGA+CGG	0.606946	5.1:-8751821	None:intergenic
TGCCATAGGAATCTTGTCGA+AGG	0.620793	5.1:+8751539	MS.gene20239:CDS
GGCAGTACCAGCATTTCCAA+TGG	0.624766	5.1:-8751520	None:intergenic
GGATAAGCTTGAACTTGCAG+AGG	0.632561	5.1:+8752061	MS.gene20239:CDS
TGATACTTGACCTTTCCAGA+TGG	0.634603	5.1:-8752095	None:intergenic
TGCAAGTTCAAGCTTATCCG+AGG	0.657193	5.1:-8752057	None:intergenic
TGAAGGACGTCTTTACCAAG+TGG	0.670157	5.1:+8751482	MS.gene20239:CDS
CTTTACATGAGCGATCCTAG+TGG	0.672737	5.1:+8751879	MS.gene20239:CDS
GGACAGCACCAGTCTTACCT+CGG	0.676388	5.1:+8752040	MS.gene20239:CDS
TAAGCTGTTGGTGAAGTCTG+GGG	0.680201	5.1:+8752142	MS.gene20239:CDS
ACTACAAGGATGATATCACA+AGG	0.683851	5.1:+8751973	MS.gene20239:CDS
GATCCTAGTGGAAACTATGG+CGG	0.705334	5.1:+8751891	MS.gene20239:CDS
CAGCTTAGTCAAGTTCTCTG+GGG	0.728921	5.1:-8752126	None:intergenic
CTACAAGGATGATATCACAA+GGG	0.766354	5.1:+8751974	MS.gene20239:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATTCTAAAACAGGACTACA+AGG	+	chr5.1:8751959-8751978	MS.gene20239:CDS	30.0%
!!	AGCACAATCAATTCTAAAAC+AGG	+	chr5.1:8751950-8751969	MS.gene20239:CDS	30.0%
	AAATTGTGTGTAACCTTGCT+TGG	-	chr5.1:8751793-8751812	None:intergenic	35.0%
	AAGCAAGGTTACACACAATT+TGG	+	chr5.1:8751792-8751811	MS.gene20239:CDS	35.0%
	ACTACAAGGATGATATCACA+AGG	+	chr5.1:8751973-8751992	MS.gene20239:CDS	35.0%
	CTACAAGGATGATATCACAA+GGG	+	chr5.1:8751974-8751993	MS.gene20239:CDS	35.0%
!!	CATTTTCTCAGTTGATGTTG+AGG	-	chr5.1:8751616-8751635	None:intergenic	35.0%
!!	GAAAGTTCTGAGCAAAACTA+TGG	+	chr5.1:8752019-8752038	MS.gene20239:CDS	35.0%
	AACAGCTTAGTCAAGTTCTC+TGG	-	chr5.1:8752131-8752150	None:intergenic	40.0%
	AACAGGAAAGAGACTCCAAA+CGG	-	chr5.1:8751828-8751847	None:intergenic	40.0%
	ACAACAATCTTCTCTCCTGA+AGG	+	chr5.1:8751465-8751484	MS.gene20239:CDS	40.0%
	ACAGCTTAGTCAAGTTCTCT+GGG	-	chr5.1:8752130-8752149	None:intergenic	40.0%
	ACATCCTAATCAACACTGCT+AGG	+	chr5.1:8751691-8751710	MS.gene20239:CDS	40.0%
	AGAGAACTTGACTAAGCTGT+TGG	+	chr5.1:8752130-8752149	MS.gene20239:CDS	40.0%
	ATAGGAATCTTGTCGAAGGA+TGG	+	chr5.1:8751543-8751562	MS.gene20239:CDS	40.0%
	ATCCTTCGACAAGATTCCTA+TGG	-	chr5.1:8751544-8751563	None:intergenic	40.0%
	CAAATGAGTAACGTTGTGCT+TGG	-	chr5.1:8751719-8751738	None:intergenic	40.0%
	CAAGGTTACACACAATTTGG+TGG	+	chr5.1:8751795-8751814	MS.gene20239:CDS	40.0%
	CAGGAGAGAAGATTGTTGTA+CGG	-	chr5.1:8751464-8751483	None:intergenic	40.0%
	GATTGAACCAACTGTTCAAC+AGG	-	chr5.1:8751759-8751778	None:intergenic	40.0%
	GTTGATTAGGATGTTGGCAT+CGG	-	chr5.1:8751685-8751704	None:intergenic	40.0%
	TAGGAATCTTGTCGAAGGAT+GGG	+	chr5.1:8751544-8751563	MS.gene20239:CDS	40.0%
	TCTCTTTGTGATACCAAGCA+AGG	+	chr5.1:8751777-8751796	MS.gene20239:CDS	40.0%
	TGATACTTGACCTTTCCAGA+TGG	-	chr5.1:8752098-8752117	None:intergenic	40.0%
	TTACCAAGTGGAGTATGCAA+TGG	+	chr5.1:8751494-8751513	MS.gene20239:CDS	40.0%
	TTAGAATTGATTGTGCTGCC+TGG	-	chr5.1:8751947-8751966	None:intergenic	40.0%
!!	AGCAGTGTTGATTAGGATGT+TGG	-	chr5.1:8751691-8751710	None:intergenic	40.0%
	AAGCTTATCCGAGGTAAGAC+TGG	-	chr5.1:8752051-8752070	None:intergenic	45.0%
	ACCAACTGTTCAACAGGCAT+TGG	-	chr5.1:8751753-8751772	None:intergenic	45.0%
	ACTTGGTAAAGACGTCCTTC+AGG	-	chr5.1:8751483-8751502	None:intergenic	45.0%
	AGCGATCCTAGTGGAAACTA+TGG	+	chr5.1:8751888-8751907	MS.gene20239:CDS	45.0%
	AGGAATCTTGTCGAAGGATG+GGG	+	chr5.1:8751545-8751564	MS.gene20239:CDS	45.0%
	CAGCTTAGTCAAGTTCTCTG+GGG	-	chr5.1:8752129-8752148	None:intergenic	45.0%
	CTCTTTCCTGTTTGCAGGAT+GGG	+	chr5.1:8751836-8751855	MS.gene20239:CDS	45.0%
	CTTTACATGAGCGATCCTAG+TGG	+	chr5.1:8751879-8751898	MS.gene20239:CDS	45.0%
	GATCCTAGTGGAAACTATGG+CGG	+	chr5.1:8751891-8751910	MS.gene20239:CDS	45.0%
	GCAGGATGGGACAAAAACTT+CGG	+	chr5.1:8751849-8751868	MS.gene20239:CDS	45.0%
	GGATAAGCTTGAACTTGCAG+AGG	+	chr5.1:8752061-8752080	MS.gene20239:CDS	45.0%
	GTTTCTTGCACCATCTGGAA+AGG	+	chr5.1:8752085-8752104	MS.gene20239:CDS	45.0%
	TCTCTTTCCTGTTTGCAGGA+TGG	+	chr5.1:8751835-8751854	MS.gene20239:CDS	45.0%
	TGAAGGACGTCTTTACCAAG+TGG	+	chr5.1:8751482-8751501	MS.gene20239:CDS	45.0%
	TGCAAGTTCAAGCTTATCCG+AGG	-	chr5.1:8752060-8752079	None:intergenic	45.0%
	TGCCATAGGAATCTTGTCGA+AGG	+	chr5.1:8751539-8751558	MS.gene20239:CDS	45.0%
	TGCTCAGAACTTTCAGTGCA+AGG	-	chr5.1:8752013-8752032	None:intergenic	45.0%
	TGTTGAGGTTTGCAGAAGCT+TGG	-	chr5.1:8751601-8751620	None:intergenic	45.0%
!	ACTAAGCTGTTGGTGAAGTC+TGG	+	chr5.1:8752140-8752159	MS.gene20239:CDS	45.0%
!	ATGTTGCATGTGCTGTTGCT+GGG	+	chr5.1:8751652-8751671	MS.gene20239:CDS	45.0%
!	CTAAGCTGTTGGTGAAGTCT+GGG	+	chr5.1:8752141-8752160	MS.gene20239:CDS	45.0%
!	TAAGCTGTTGGTGAAGTCTG+GGG	+	chr5.1:8752142-8752161	MS.gene20239:CDS	45.0%
!	TGTTCTGGTTGGCGAAAAGA+AGG	+	chr5.1:8751569-8751588	MS.gene20239:CDS	45.0%
!	TTTTGTCCCATCCTGCAAAC+AGG	-	chr5.1:8751845-8751864	None:intergenic	45.0%
!!	GGATCCTAGCAGTGTTGATT+AGG	-	chr5.1:8751698-8751717	None:intergenic	45.0%
	AACTATGGCGGTTGGAAAGC+CGG	+	chr5.1:8751903-8751922	MS.gene20239:CDS	50.0%
	AAGCAGTCTCTGTTGCTGGT+TGG	-	chr5.1:8752172-8752191	None:intergenic	50.0%
	AAGGATGGGGTTGTTCTGGT+TGG	+	chr5.1:8751558-8751577	MS.gene20239:CDS	50.0%
	ATGGAGGCCATTGGAAATGC+TGG	+	chr5.1:8751513-8751532	MS.gene20239:CDS	50.0%
	CAACCGCCATAGTTTCCACT+AGG	-	chr5.1:8751897-8751916	None:intergenic	50.0%
	CCAAGTGGAGTATGCAATGG+AGG	+	chr5.1:8751497-8751516	MS.gene20239:CDS	50.0%
	CCTCCATTGCATACTCCACT+TGG	-	chr5.1:8751500-8751519	None:intergenic	50.0%
	CTAGTGGAAACTATGGCGGT+TGG	+	chr5.1:8751895-8751914	MS.gene20239:CDS	50.0%
	GAGTATGCAATGGAGGCCAT+TGG	+	chr5.1:8751504-8751523	MS.gene20239:CDS	50.0%
	GCCAATGCCTGTTGAACAGT+TGG	+	chr5.1:8751749-8751768	MS.gene20239:CDS	50.0%
	GGAAAGAGACTCCAAACGGA+CGG	-	chr5.1:8751824-8751843	None:intergenic	50.0%
	GGAAATGCTGGTACTGCCAT+AGG	+	chr5.1:8751525-8751544	MS.gene20239:CDS	50.0%
	GGAGTCTCTTTCCTGTTTGC+AGG	+	chr5.1:8751831-8751850	MS.gene20239:CDS	50.0%
	GGCAGTACCAGCATTTCCAA+TGG	-	chr5.1:8751523-8751542	None:intergenic	50.0%
	GTTGTTGGCACCAATAGCAC+CGG	-	chr5.1:8751925-8751944	None:intergenic	50.0%
	TGATTGTGCTGCCTGGTTGT+TGG	-	chr5.1:8751940-8751959	None:intergenic	50.0%
!	AGCAGTCTCTGTTGCTGGTT+GGG	-	chr5.1:8752171-8752190	None:intergenic	50.0%
!	CATGTTGCATGTGCTGTTGC+TGG	+	chr5.1:8751651-8751670	MS.gene20239:CDS	50.0%
!	GAGGTGTTTCTTGCACCATC+TGG	+	chr5.1:8752080-8752099	MS.gene20239:CDS	50.0%
!!	GTTCAACAGGCATTGGCTCT+TGG	-	chr5.1:8751746-8751765	None:intergenic	50.0%
!!	TGCTATTGGTGCCAACAACC+AGG	+	chr5.1:8751926-8751945	MS.gene20239:CDS	50.0%
	GGACAGCACCAGTCTTACCT+CGG	+	chr5.1:8752040-8752059	MS.gene20239:CDS	55.0%
	GTCGAAGGATGGGGTTGTTC+TGG	+	chr5.1:8751554-8751573	MS.gene20239:CDS	55.0%
!	TTTGGTGGTCTCCGTCCGTT+TGG	+	chr5.1:8751810-8751829	MS.gene20239:CDS	55.0%
!!	GGTTGGAAAGCCGGTGCTAT+TGG	+	chr5.1:8751912-8751931	MS.gene20239:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.1	gene	8751441	8752193	8751441	ID=MS.gene20239
chr5.1	mRNA	8751441	8752193	8751441	ID=MS.gene20239.t1;Parent=MS.gene20239
chr5.1	exon	8751441	8752193	8751441	ID=MS.gene20239.t1.exon1;Parent=MS.gene20239.t1
chr5.1	CDS	8751441	8752193	8751441	ID=cds.MS.gene20239.t1;Parent=MS.gene20239.t1

Gene Sequence

>MS.gene20239

ATGTCTCGAAGATATGATAGCCGTACAACAATCTTCTCTCCTGAAGGACGTCTTTACCAAGTGGAGTATGCAATGGAGGCCATTGGAAATGCTGGTACTGCCATAGGAATCTTGTCGAAGGATGGGGTTGTTCTGGTTGGCGAAAAGAAGGTGACATCCAAGCTTCTGCAAACCTCAACATCAACTGAGAAAATGTACAAGATTGATGATCATGTTGCATGTGCTGTTGCTGGGATTATGTCCGATGCCAACATCCTAATCAACACTGCTAGGATCCAAGCACAACGTTACTCATTTGCTTACCAAGAGCCAATGCCTGTTGAACAGTTGGTTCAATCTCTTTGTGATACCAAGCAAGGTTACACACAATTTGGTGGTCTCCGTCCGTTTGGAGTCTCTTTCCTGTTTGCAGGATGGGACAAAAACTTCGGCTTTCAACTTTACATGAGCGATCCTAGTGGAAACTATGGCGGTTGGAAAGCCGGTGCTATTGGTGCCAACAACCAGGCAGCACAATCAATTCTAAAACAGGACTACAAGGATGATATCACAAGGGAAGAAGCAGTTAACCTTGCACTGAAAGTTCTGAGCAAAACTATGGACAGCACCAGTCTTACCTCGGATAAGCTTGAACTTGCAGAGGTGTTTCTTGCACCATCTGGAAAGGTCAAGTATCAAGTTTGCTCCCCAGAGAACTTGACTAAGCTGTTGGTGAAGTCTGGGGTGACCCAACCAGCAACAGAGACTGCTTAG

Protein sequence

>MS.gene20239.t1

MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARIQAQRYSFAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNFGFQLYMSDPSGNYGGWKAGAIGANNQAAQSILKQDYKDDITREEAVNLALKVLSKTMDSTSLTSDKLELAEVFLAPSGKVKYQVCSPENLTKLLVKSGVTQPATETA