AlfalfaGEDB | MS.gene57214

M. sativa cultivar XinJiangDaYe / MS.gene57214

KEGG: K02728
GO: GO:0003674 GO:0003824 GO:0004175 GO:0004298 GO:0005575 GO:0005839 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0009987 GO:0016787 GO:0019538 GO:0019773 GO:0019941 GO:0032991 GO:0043170 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0051603 GO:0070003 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901575
PFAM: PF00227.29 PF10584.12

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene57214.t1	XP_003611674.1	100	250	0	0	1	250	1	250	1.10E-134	489.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene57214.t1	P52427	90.0	250	25	0	1	250	1	250	8.3e-126	451.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene57214.t1	G7K595	100.0	250	0	0	1	250	1	250	8.3e-135	489.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049255	MS.gene57214	0.805725	1.16E-49	-1.69E-46
MS.gene050437	MS.gene57214	0.836062	1.17E-56	-1.69E-46
MS.gene050689	MS.gene57214	0.829485	5.01E-55	-1.69E-46
MS.gene050752	MS.gene57214	0.867086	1.77E-65	-1.69E-46
MS.gene050838	MS.gene57214	0.832665	8.30E-56	-1.69E-46
MS.gene050955	MS.gene57214	0.852662	3.98E-61	-1.69E-46
MS.gene051003	MS.gene57214	0.879724	9.86E-70	-1.69E-46
MS.gene051234	MS.gene57214	0.806421	8.29E-50	-1.69E-46
MS.gene051328	MS.gene57214	0.805866	1.09E-49	-1.69E-46
MS.gene051757	MS.gene57214	0.80798	3.88E-50	-1.69E-46
MS.gene051975	MS.gene57214	0.802876	4.56E-49	-1.69E-46
MS.gene052335	MS.gene57214	0.825084	5.68E-54	-1.69E-46
MS.gene053058	MS.gene57214	0.802839	4.64E-49	-1.69E-46
MS.gene054403	MS.gene57214	0.859394	4.26E-63	-1.69E-46
MS.gene055162	MS.gene57214	0.813293	2.75E-51	-1.69E-46
MS.gene056787	MS.gene57214	0.813142	2.97E-51	-1.69E-46
MS.gene057215	MS.gene57214	0.821995	3.00E-53	-1.69E-46
MS.gene058906	MS.gene57214	0.817773	2.77E-52	-1.69E-46
MS.gene059146	MS.gene57214	0.810584	1.07E-50	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene058061	MS.gene57214	PPI
MS.gene40486	MS.gene57214	PPI
MS.gene070615	MS.gene57214	PPI
MS.gene012131	MS.gene57214	PPI
MS.gene63845	MS.gene57214	PPI
MS.gene92186	MS.gene57214	PPI
MS.gene071304	MS.gene57214	PPI
MS.gene89677	MS.gene57214	PPI
MS.gene57214	MS.gene066737	PPI
MS.gene47175	MS.gene57214	PPI
MS.gene77139	MS.gene57214	PPI
MS.gene74962	MS.gene57214	PPI
MS.gene57214	MS.gene071345	PPI
MS.gene074000	MS.gene57214	PPI
MS.gene024828	MS.gene57214	PPI
MS.gene071345	MS.gene57214	PPI
MS.gene046093	MS.gene57214	PPI
MS.gene066737	MS.gene57214	PPI
MS.gene24255	MS.gene57214	PPI
MS.gene09974	MS.gene57214	PPI
MS.gene57214	MS.gene27289	PPI
MS.gene27247	MS.gene57214	PPI
MS.gene017616	MS.gene57214	PPI
MS.gene57214	MS.gene24252	PPI
MS.gene029314	MS.gene57214	PPI
MS.gene039040	MS.gene57214	PPI
MS.gene24253	MS.gene57214	PPI
MS.gene57214	MS.gene76217	PPI
MS.gene57214	MS.gene21169	PPI
MS.gene26985	MS.gene57214	PPI
MS.gene025808	MS.gene57214	PPI
MS.gene29922	MS.gene57214	PPI
MS.gene066738	MS.gene57214	PPI
MS.gene57214	MS.gene21801	PPI
MS.gene48062	MS.gene57214	PPI
MS.gene84459	MS.gene57214	PPI
MS.gene64609	MS.gene57214	PPI
MS.gene57214	MS.gene77139	PPI
MS.gene006641	MS.gene57214	PPI
MS.gene55530	MS.gene57214	PPI
MS.gene045566	MS.gene57214	PPI
MS.gene90698	MS.gene57214	PPI
MS.gene043801	MS.gene57214	PPI
MS.gene29256	MS.gene57214	PPI
MS.gene57214	MS.gene74417	PPI
MS.gene065045	MS.gene57214	PPI
MS.gene074061	MS.gene57214	PPI
MS.gene44226	MS.gene57214	PPI
MS.gene24252	MS.gene57214	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene57214.t1	MTR_5g016590	100.000	250	0	0	1	250	1	250	0.0	518
MS.gene57214.t1	MTR_7g070070	98.000	250	5	0	1	250	1	250	0.0	509
MS.gene57214.t1	MTR_1g112250	42.324	241	121	7	5	239	8	236	6.23e-59	187
MS.gene57214.t1	MTR_8g075320	42.500	200	112	3	4	202	3	200	4.37e-53	172
MS.gene57214.t1	MTR_2g016050	41.500	200	114	3	4	202	3	200	9.18e-51	166
MS.gene57214.t1	MTR_0167s0060	36.325	234	142	4	4	237	5	231	4.41e-48	159
MS.gene57214.t1	MTR_1g022410	38.785	214	125	3	4	215	5	214	3.24e-43	148
MS.gene57214.t1	MTR_8g464460	41.709	199	112	3	5	200	9	206	3.24e-43	147
MS.gene57214.t1	MTR_2g060830	36.975	238	138	6	5	237	9	239	1.19e-40	140
MS.gene57214.t1	MTR_6g024135	35.071	211	135	2	5	215	8	216	2.11e-37	132
MS.gene57214.t1	MTR_4g012740	28.968	252	135	6	4	215	236	483	6.44e-22	94.7
MS.gene57214.t1	MTR_6g013300	32.821	195	112	8	33	220	138	320	1.09e-16	78.6
MS.gene57214.t1	MTR_4g057090	29.947	187	119	5	26	207	110	289	3.14e-14	71.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene57214.t1	AT3G22110	90.400	250	24	0	1	250	1	250	3.64e-173	477
MS.gene57214.t1	AT4G15165	72.000	250	28	1	1	250	1	208	3.76e-127	359
MS.gene57214.t1	AT3G14290	42.149	242	122	7	4	239	7	236	1.83e-59	188
MS.gene57214.t1	AT1G53850	41.322	242	124	7	4	239	7	236	1.17e-58	186
MS.gene57214.t1	AT1G53850	41.322	242	124	7	4	239	7	236	1.17e-58	186
MS.gene57214.t1	AT5G66140	42.000	200	113	3	4	202	3	200	1.78e-52	171
MS.gene57214.t1	AT3G51260	42.500	200	112	3	4	202	3	200	2.12e-52	171
MS.gene57214.t1	AT3G51260	42.500	200	112	3	4	202	3	200	2.31e-52	170
MS.gene57214.t1	AT1G16470	37.264	212	130	3	4	215	5	213	1.32e-46	155
MS.gene57214.t1	AT1G16470	37.264	212	130	3	4	215	5	213	1.32e-46	155
MS.gene57214.t1	AT1G79210	37.264	212	130	3	4	215	5	213	1.56e-46	155
MS.gene57214.t1	AT1G79210	37.264	212	130	3	4	215	5	213	1.56e-46	155
MS.gene57214.t1	AT1G79210	37.264	212	130	3	4	215	5	213	1.56e-46	155
MS.gene57214.t1	AT5G42790	39.320	206	119	3	4	207	5	206	5.65e-44	150
MS.gene57214.t1	AT1G47250	38.350	206	121	3	4	207	5	206	3.06e-43	148
MS.gene57214.t1	AT5G35590	40.201	199	115	3	5	200	9	206	2.10e-41	142
MS.gene57214.t1	AT2G05840	37.688	199	120	3	5	200	9	206	5.22e-38	132
MS.gene57214.t1	AT2G05840	37.688	199	120	3	5	200	9	206	5.93e-38	133
MS.gene57214.t1	AT2G05840	37.745	204	116	4	5	205	9	204	3.34e-37	130
MS.gene57214.t1	AT2G27020	32.314	229	150	4	5	233	8	231	2.77e-36	129
MS.gene57214.t1	AT2G27020	32.314	229	150	4	5	233	110	333	3.24e-35	129

Find 73 sgRNAs with CRISPR-Local

Find 77 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGAGTCTCTTTCCTGTTTGC+AGG	0.211747	5.4:-9933411	MS.gene57214:CDS
CTCTTTCCTGTTTGCAGGAT+GGG	0.248276	5.4:-9933406	MS.gene57214:CDS
ACTAAGCTGTTGGTGAAGTC+TGG	0.280754	5.4:-9933102	MS.gene57214:CDS
CATGTTGCATGTGCTGTTGC+TGG	0.302104	5.4:-9933591	MS.gene57214:CDS
AAGCAAGGTTACACACAATT+TGG	0.305332	5.4:-9933450	MS.gene57214:CDS
GGATCCTAGCAGTGTTGATT+AGG	0.325400	5.4:+9933547	None:intergenic
GTCGAAGGATGGGGTTGTTC+TGG	0.338789	5.4:-9933688	MS.gene57214:CDS
AGCAGTCTCTGTTGCTGGTT+GGG	0.364107	5.4:+9933074	None:intergenic
AGCGATCCTAGTGGAAATTA+TGG	0.367986	5.4:-9933354	MS.gene57214:CDS
GAAAGTTCTGAGCAAAACTA+TGG	0.379385	5.4:-9933223	MS.gene57214:CDS
AACAGCTTAGTCAAGTTCTC+TGG	0.381164	5.4:+9933114	None:intergenic
AGCTAAGCAGTCTCTGTTGC+TGG	0.412030	5.4:+9933069	None:intergenic
TTTGGTGGTCTCCGTCCGTT+TGG	0.423167	5.4:-9933432	MS.gene57214:CDS
GGTTGGAAAGCCGGTGCTAT+TGG	0.431124	5.4:-9933330	MS.gene57214:CDS
TGATTGTGCTGCCTGGTTGT+TGG	0.432231	5.4:+9933305	None:intergenic
AGCACAATCAATTCTAAAAC+AGG	0.435611	5.4:-9933292	MS.gene57214:CDS
GATTGAACCAACTGTTCAAC+AGG	0.438880	5.4:+9933486	None:intergenic
GTTCAACAGGCATTGGCTCT+TGG	0.441840	5.4:+9933499	None:intergenic
CTAAGCTGTTGGTGAAGTCT+GGG	0.453484	5.4:-9933101	MS.gene57214:CDS
TCTCTTTCCTGTTTGCAGGA+TGG	0.460327	5.4:-9933407	MS.gene57214:CDS
AAGCAGTCTCTGTTGCTGGT+TGG	0.471981	5.4:+9933073	None:intergenic
ATGTTGCATGTGCTGTTGCT+GGG	0.490338	5.4:-9933590	MS.gene57214:CDS
TGTTCTGGTTGGCGAAAAGA+AGG	0.492197	5.4:-9933673	MS.gene57214:CDS
AATTATGGCGGTTGGAAAGC+CGG	0.495351	5.4:-9933339	MS.gene57214:CDS
TGCTCAGAACTTTCAGTGCA+AGG	0.496408	5.4:+9933232	None:intergenic
ACAGCTTAGTCAAGTTCTCT+GGG	0.496829	5.4:+9933115	None:intergenic
AGCAGTGTTGATTAGGATGT+TGG	0.496912	5.4:+9933554	None:intergenic
GCCAATGCCTGTTGAACAGT+TGG	0.499789	5.4:-9933493	MS.gene57214:CDS
TTAGAATTGATTGTGCTGCC+TGG	0.504956	5.4:+9933298	None:intergenic
AAGCTTATCCGAGGTAAGAC+TGG	0.507716	5.4:+9933194	None:intergenic
TGTTGAGGTTTGCAGAAGCT+TGG	0.509366	5.4:+9933644	None:intergenic
ACTTGGTAAAGACGTCCTTC+AGG	0.509793	5.4:+9933762	None:intergenic
TAGGAATCTTGTCGAAGGAT+GGG	0.512721	5.4:-9933698	MS.gene57214:CDS
CAAATGAGTAACGTTGTGCT+TGG	0.513670	5.4:+9933526	None:intergenic
CAACCGCCATAATTTCCACT+AGG	0.518150	5.4:+9933348	None:intergenic
AAGGATGGGGTTGTTCTGGT+TGG	0.521102	5.4:-9933684	MS.gene57214:CDS
ACCAACTGTTCAACAGGCAT+TGG	0.523493	5.4:+9933492	None:intergenic
GGAAATGCTGGTACTGCCAT+AGG	0.528749	5.4:-9933717	MS.gene57214:CDS
CTAGTGGAAATTATGGCGGT+TGG	0.531106	5.4:-9933347	MS.gene57214:CDS
ATAGGAATCTTGTCGAAGGA+TGG	0.537221	5.4:-9933699	MS.gene57214:CDS
TGCTATTGGTGCCAACAACC+AGG	0.540083	5.4:-9933316	MS.gene57214:CDS
ATCCTTCGACAAGATTCCTA+TGG	0.544761	5.4:+9933701	None:intergenic
ATGGAGGCCATTGGAAATGC+TGG	0.546199	5.4:-9933729	MS.gene57214:CDS
AAATTGTGTGTAACCTTGCT+TGG	0.550671	5.4:+9933452	None:intergenic
CCTCCATTGCATACTCCACT+TGG	0.550938	5.4:+9933745	None:intergenic
AATTCTAAAACAGGACTACA+AGG	0.553479	5.4:-9933283	MS.gene57214:CDS
AGGAATCTTGTCGAAGGATG+GGG	0.558136	5.4:-9933697	MS.gene57214:CDS
ACATCCTAATCAACACTGCT+AGG	0.565540	5.4:-9933551	MS.gene57214:CDS
CAAGGTTACACACAATTTGG+TGG	0.565666	5.4:-9933447	MS.gene57214:CDS
GTTGTTGGCACCAATAGCAC+CGG	0.570780	5.4:+9933320	None:intergenic
GGATAAGCTTGAACTTGCAG+AGG	0.575420	5.4:-9933181	MS.gene57214:CDS
GTTGATTAGGATGTTGGCAT+CGG	0.579727	5.4:+9933560	None:intergenic
AACAGGAAAGAGACTCCAAA+CGG	0.582222	5.4:+9933417	None:intergenic
CAGGAGAGAAGATTGTTGTA+CGG	0.584834	5.4:+9933781	None:intergenic
CCAAGTGGAGTATGCAATGG+AGG	0.586792	5.4:-9933745	MS.gene57214:CDS
GAGTATGCAATGGAGGCCAT+TGG	0.587807	5.4:-9933738	MS.gene57214:CDS
AGAGAACTTGACTAAGCTGT+TGG	0.594383	5.4:-9933112	MS.gene57214:CDS
ACAACAATCTTCTCTCCTGA+AGG	0.598896	5.4:-9933777	MS.gene57214:CDS
TTACCAAGTGGAGTATGCAA+TGG	0.599728	5.4:-9933748	MS.gene57214:CDS
TCTCTTTGTGATACCAAGCA+AGG	0.600349	5.4:-9933465	MS.gene57214:CDS
GGAAAGAGACTCCAAACGGA+CGG	0.606946	5.4:+9933421	None:intergenic
TGCCATAGGAATCTTGTCGA+AGG	0.620793	5.4:-9933703	MS.gene57214:CDS
GGCAGTACCAGCATTTCCAA+TGG	0.624766	5.4:+9933722	None:intergenic
TGATACTTGACCTTTCCAGA+TGG	0.634603	5.4:+9933147	None:intergenic
TGCAAGTTCAAGCTTATCCG+AGG	0.657193	5.4:+9933185	None:intergenic
TGAAGGACGTCTTTACCAAG+TGG	0.670157	5.4:-9933760	MS.gene57214:CDS
CTTTACATGAGCGATCCTAG+TGG	0.672737	5.4:-9933363	MS.gene57214:CDS
GGACAGCACCAGTCTTACCT+CGG	0.676388	5.4:-9933202	MS.gene57214:CDS
TAAGCTGTTGGTGAAGTCTG+GGG	0.680201	5.4:-9933100	MS.gene57214:CDS
ACTACAAGGATGATATCACA+AGG	0.683851	5.4:-9933269	MS.gene57214:CDS
GATCCTAGTGGAAATTATGG+CGG	0.717061	5.4:-9933351	MS.gene57214:CDS
CAGCTTAGTCAAGTTCTCTG+GGG	0.728921	5.4:+9933116	None:intergenic
CTACAAGGATGATATCACAA+GGG	0.766354	5.4:-9933268	MS.gene57214:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATTCTAAAACAGGACTACA+AGG	-	chr5.4:9933589-9933608	MS.gene57214:CDS	30.0%
!!	AGCACAATCAATTCTAAAAC+AGG	-	chr5.4:9933580-9933599	MS.gene57214:CDS	30.0%
	AAATTGTGTGTAACCTTGCT+TGG	+	chr5.4:9933423-9933442	None:intergenic	35.0%
	AAGCAAGGTTACACACAATT+TGG	-	chr5.4:9933422-9933441	MS.gene57214:CDS	35.0%
	ACTACAAGGATGATATCACA+AGG	-	chr5.4:9933603-9933622	MS.gene57214:CDS	35.0%
	CTACAAGGATGATATCACAA+GGG	-	chr5.4:9933604-9933623	MS.gene57214:CDS	35.0%
!!	CATTTTCTCAGTTGATGTTG+AGG	+	chr5.4:9933246-9933265	None:intergenic	35.0%
!!	GAAAGTTCTGAGCAAAACTA+TGG	-	chr5.4:9933649-9933668	MS.gene57214:CDS	35.0%
	AACAGCTTAGTCAAGTTCTC+TGG	+	chr5.4:9933761-9933780	None:intergenic	40.0%
	AACAGGAAAGAGACTCCAAA+CGG	+	chr5.4:9933458-9933477	None:intergenic	40.0%
	ACAACAATCTTCTCTCCTGA+AGG	-	chr5.4:9933095-9933114	MS.gene57214:CDS	40.0%
	ACAGCTTAGTCAAGTTCTCT+GGG	+	chr5.4:9933760-9933779	None:intergenic	40.0%
	ACATCCTAATCAACACTGCT+AGG	-	chr5.4:9933321-9933340	MS.gene57214:CDS	40.0%
	AGAGAACTTGACTAAGCTGT+TGG	-	chr5.4:9933760-9933779	MS.gene57214:CDS	40.0%
	AGCGATCCTAGTGGAAATTA+TGG	-	chr5.4:9933518-9933537	MS.gene57214:CDS	40.0%
	ATAGGAATCTTGTCGAAGGA+TGG	-	chr5.4:9933173-9933192	MS.gene57214:CDS	40.0%
	ATCCTTCGACAAGATTCCTA+TGG	+	chr5.4:9933174-9933193	None:intergenic	40.0%
	CAAATGAGTAACGTTGTGCT+TGG	+	chr5.4:9933349-9933368	None:intergenic	40.0%
	CAAGGTTACACACAATTTGG+TGG	-	chr5.4:9933425-9933444	MS.gene57214:CDS	40.0%
	CAGGAGAGAAGATTGTTGTA+CGG	+	chr5.4:9933094-9933113	None:intergenic	40.0%
	GATCCTAGTGGAAATTATGG+CGG	-	chr5.4:9933521-9933540	MS.gene57214:CDS	40.0%
	GATTGAACCAACTGTTCAAC+AGG	+	chr5.4:9933389-9933408	None:intergenic	40.0%
	GTTGATTAGGATGTTGGCAT+CGG	+	chr5.4:9933315-9933334	None:intergenic	40.0%
	TAGGAATCTTGTCGAAGGAT+GGG	-	chr5.4:9933174-9933193	MS.gene57214:CDS	40.0%
	TCTCTTTGTGATACCAAGCA+AGG	-	chr5.4:9933407-9933426	MS.gene57214:CDS	40.0%
	TGATACTTGACCTTTCCAGA+TGG	+	chr5.4:9933728-9933747	None:intergenic	40.0%
	TTACCAAGTGGAGTATGCAA+TGG	-	chr5.4:9933124-9933143	MS.gene57214:CDS	40.0%
	TTAGAATTGATTGTGCTGCC+TGG	+	chr5.4:9933577-9933596	None:intergenic	40.0%
!	TTTTCTTGCACCATCTGGAA+AGG	-	chr5.4:9933715-9933734	MS.gene57214:CDS	40.0%
!!	AGCAGTGTTGATTAGGATGT+TGG	+	chr5.4:9933321-9933340	None:intergenic	40.0%
	AAGCTTATCCGAGGTAAGAC+TGG	+	chr5.4:9933681-9933700	None:intergenic	45.0%
	AATTATGGCGGTTGGAAAGC+CGG	-	chr5.4:9933533-9933552	MS.gene57214:CDS	45.0%
	ACCAACTGTTCAACAGGCAT+TGG	+	chr5.4:9933383-9933402	None:intergenic	45.0%
	ACTTGGTAAAGACGTCCTTC+AGG	+	chr5.4:9933113-9933132	None:intergenic	45.0%
	AGGAATCTTGTCGAAGGATG+GGG	-	chr5.4:9933175-9933194	MS.gene57214:CDS	45.0%
	CAACCGCCATAATTTCCACT+AGG	+	chr5.4:9933527-9933546	None:intergenic	45.0%
	CAGCTTAGTCAAGTTCTCTG+GGG	+	chr5.4:9933759-9933778	None:intergenic	45.0%
	CTAGTGGAAATTATGGCGGT+TGG	-	chr5.4:9933525-9933544	MS.gene57214:CDS	45.0%
	CTCTTTCCTGTTTGCAGGAT+GGG	-	chr5.4:9933466-9933485	MS.gene57214:CDS	45.0%
	CTTTACATGAGCGATCCTAG+TGG	-	chr5.4:9933509-9933528	MS.gene57214:CDS	45.0%
	GCAGGATGGGACAAAAACTT+CGG	-	chr5.4:9933479-9933498	MS.gene57214:CDS	45.0%
	GGATAAGCTTGAACTTGCAG+AGG	-	chr5.4:9933691-9933710	MS.gene57214:CDS	45.0%
	TCTCTTTCCTGTTTGCAGGA+TGG	-	chr5.4:9933465-9933484	MS.gene57214:CDS	45.0%
	TGAAGGACGTCTTTACCAAG+TGG	-	chr5.4:9933112-9933131	MS.gene57214:CDS	45.0%
	TGCAAGTTCAAGCTTATCCG+AGG	+	chr5.4:9933690-9933709	None:intergenic	45.0%
	TGCCATAGGAATCTTGTCGA+AGG	-	chr5.4:9933169-9933188	MS.gene57214:CDS	45.0%
	TGCTCAGAACTTTCAGTGCA+AGG	+	chr5.4:9933643-9933662	None:intergenic	45.0%
	TGTTGAGGTTTGCAGAAGCT+TGG	+	chr5.4:9933231-9933250	None:intergenic	45.0%
!	ACTAAGCTGTTGGTGAAGTC+TGG	-	chr5.4:9933770-9933789	MS.gene57214:CDS	45.0%
!	ATGTTGCATGTGCTGTTGCT+GGG	-	chr5.4:9933282-9933301	MS.gene57214:CDS	45.0%
!	CTAAGCTGTTGGTGAAGTCT+GGG	-	chr5.4:9933771-9933790	MS.gene57214:CDS	45.0%
!	GAGGTTTTTCTTGCACCATC+TGG	-	chr5.4:9933710-9933729	MS.gene57214:CDS	45.0%
!	TAAGCTGTTGGTGAAGTCTG+GGG	-	chr5.4:9933772-9933791	MS.gene57214:CDS	45.0%
!	TGTTCTGGTTGGCGAAAAGA+AGG	-	chr5.4:9933199-9933218	MS.gene57214:CDS	45.0%
!	TTTTGTCCCATCCTGCAAAC+AGG	+	chr5.4:9933475-9933494	None:intergenic	45.0%
!!	GGATCCTAGCAGTGTTGATT+AGG	+	chr5.4:9933328-9933347	None:intergenic	45.0%
	AAGCAGTCTCTGTTGCTGGT+TGG	+	chr5.4:9933802-9933821	None:intergenic	50.0%
	AAGGATGGGGTTGTTCTGGT+TGG	-	chr5.4:9933188-9933207	MS.gene57214:CDS	50.0%
	ATGGAGGCCATTGGAAATGC+TGG	-	chr5.4:9933143-9933162	MS.gene57214:CDS	50.0%
	CCAAGTGGAGTATGCAATGG+AGG	-	chr5.4:9933127-9933146	MS.gene57214:CDS	50.0%
	CCTCCATTGCATACTCCACT+TGG	+	chr5.4:9933130-9933149	None:intergenic	50.0%
	GAGTATGCAATGGAGGCCAT+TGG	-	chr5.4:9933134-9933153	MS.gene57214:CDS	50.0%
	GCCAATGCCTGTTGAACAGT+TGG	-	chr5.4:9933379-9933398	MS.gene57214:CDS	50.0%
	GGAAAGAGACTCCAAACGGA+CGG	+	chr5.4:9933454-9933473	None:intergenic	50.0%
	GGAAATGCTGGTACTGCCAT+AGG	-	chr5.4:9933155-9933174	MS.gene57214:CDS	50.0%
	GGAGTCTCTTTCCTGTTTGC+AGG	-	chr5.4:9933461-9933480	MS.gene57214:CDS	50.0%
	GGCAGTACCAGCATTTCCAA+TGG	+	chr5.4:9933153-9933172	None:intergenic	50.0%
	GTTGTTGGCACCAATAGCAC+CGG	+	chr5.4:9933555-9933574	None:intergenic	50.0%
	TGATTGTGCTGCCTGGTTGT+TGG	+	chr5.4:9933570-9933589	None:intergenic	50.0%
!	AGCAGTCTCTGTTGCTGGTT+GGG	+	chr5.4:9933801-9933820	None:intergenic	50.0%
!	CATGTTGCATGTGCTGTTGC+TGG	-	chr5.4:9933281-9933300	MS.gene57214:CDS	50.0%
!!	GTTCAACAGGCATTGGCTCT+TGG	+	chr5.4:9933376-9933395	None:intergenic	50.0%
!!	TGCTATTGGTGCCAACAACC+AGG	-	chr5.4:9933556-9933575	MS.gene57214:CDS	50.0%
	GGACAGCACCAGTCTTACCT+CGG	-	chr5.4:9933670-9933689	MS.gene57214:CDS	55.0%
	GTCGAAGGATGGGGTTGTTC+TGG	-	chr5.4:9933184-9933203	MS.gene57214:CDS	55.0%
!	TTTGGTGGTCTCCGTCCGTT+TGG	-	chr5.4:9933440-9933459	MS.gene57214:CDS	55.0%
!!	GGTTGGAAAGCCGGTGCTAT+TGG	-	chr5.4:9933542-9933561	MS.gene57214:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.4	gene	9933071	9933823	9933071	ID=MS.gene57214
chr5.4	mRNA	9933071	9933823	9933071	ID=MS.gene57214.t1;Parent=MS.gene57214
chr5.4	exon	9933071	9933823	9933071	ID=MS.gene57214.t1.exon1;Parent=MS.gene57214.t1
chr5.4	CDS	9933071	9933823	9933071	ID=cds.MS.gene57214.t1;Parent=MS.gene57214.t1

Gene Sequence

>MS.gene57214

ATGTCTCGAAGATATGATAGCCGTACAACAATCTTCTCTCCTGAAGGACGTCTTTACCAAGTGGAGTATGCAATGGAGGCCATTGGAAATGCTGGTACTGCCATAGGAATCTTGTCGAAGGATGGGGTTGTTCTGGTTGGCGAAAAGAAGGTGACATCCAAGCTTCTGCAAACCTCAACATCAACTGAGAAAATGTACAAGATTGATGATCATGTTGCATGTGCTGTTGCTGGGATTATGTCCGATGCCAACATCCTAATCAACACTGCTAGGATCCAAGCACAACGTTACTCATTTGCTTACCAAGAGCCAATGCCTGTTGAACAGTTGGTTCAATCTCTTTGTGATACCAAGCAAGGTTACACACAATTTGGTGGTCTCCGTCCGTTTGGAGTCTCTTTCCTGTTTGCAGGATGGGACAAAAACTTCGGCTTTCAACTTTACATGAGCGATCCTAGTGGAAATTATGGCGGTTGGAAAGCCGGTGCTATTGGTGCCAACAACCAGGCAGCACAATCAATTCTAAAACAGGACTACAAGGATGATATCACAAGGGAAGAAGCAGTTAACCTTGCACTGAAAGTTCTGAGCAAAACTATGGACAGCACCAGTCTTACCTCGGATAAGCTTGAACTTGCAGAGGTTTTTCTTGCACCATCTGGAAAGGTCAAGTATCAAGTTTGCTCCCCAGAGAACTTGACTAAGCTGTTGGTGAAGTCTGGGGTGACCCAACCAGCAACAGAGACTGCTTAG

Protein sequence

>MS.gene57214.t1

MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARIQAQRYSFAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNFGFQLYMSDPSGNYGGWKAGAIGANNQAAQSILKQDYKDDITREEAVNLALKVLSKTMDSTSLTSDKLELAEVFLAPSGKVKYQVCSPENLTKLLVKSGVTQPATETA