Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070088.t1 | XP_003612605.1 | 95.6 | 205 | 9 | 0 | 1 | 205 | 1 | 205 | 3.60E-109 | 404.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070088.t1 | G7K6U3 | 95.6 | 205 | 9 | 0 | 1 | 205 | 1 | 205 | 2.6e-109 | 404.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene070088 | -0.816539 | 5.25E-52 | -1.69E-46 |
| MS.gene049435 | MS.gene070088 | -0.811844 | 5.71E-51 | -1.69E-46 |
| MS.gene049501 | MS.gene070088 | -0.829264 | 5.67E-55 | -1.69E-46 |
| MS.gene049821 | MS.gene070088 | -0.813391 | 2.62E-51 | -1.69E-46 |
| MS.gene049850 | MS.gene070088 | -0.824126 | 9.56E-54 | -1.69E-46 |
| MS.gene050020 | MS.gene070088 | -0.827757 | 1.31E-54 | -1.69E-46 |
| MS.gene050442 | MS.gene070088 | -0.865566 | 5.38E-65 | -1.69E-46 |
| MS.gene050719 | MS.gene070088 | -0.821671 | 3.57E-53 | -1.69E-46 |
| MS.gene050721 | MS.gene070088 | -0.823687 | 1.21E-53 | -1.69E-46 |
| MS.gene050724 | MS.gene070088 | -0.812481 | 4.15E-51 | -1.69E-46 |
| MS.gene050750 | MS.gene070088 | -0.805091 | 1.58E-49 | -1.69E-46 |
| MS.gene050759 | MS.gene070088 | -0.839821 | 1.26E-57 | -1.69E-46 |
| MS.gene050787 | MS.gene070088 | -0.816398 | 5.65E-52 | -1.69E-46 |
| MS.gene050807 | MS.gene070088 | -0.828399 | 9.19E-55 | -1.69E-46 |
| MS.gene050808 | MS.gene070088 | -0.824022 | 1.01E-53 | -1.69E-46 |
| MS.gene050815 | MS.gene070088 | -0.836792 | 7.60E-57 | -1.69E-46 |
| MS.gene050826 | MS.gene070088 | -0.81048 | 1.13E-50 | -1.69E-46 |
| MS.gene050953 | MS.gene070088 | -0.802989 | 4.32E-49 | -1.69E-46 |
| MS.gene050962 | MS.gene070088 | -0.835426 | 1.69E-56 | -1.69E-46 |
| MS.gene051247 | MS.gene070088 | -0.822204 | 2.68E-53 | -1.69E-46 |
| MS.gene051265 | MS.gene070088 | -0.825244 | 5.21E-54 | -1.69E-46 |
| MS.gene051388 | MS.gene070088 | -0.808989 | 2.36E-50 | -1.69E-46 |
| MS.gene051594 | MS.gene070088 | -0.829836 | 4.12E-55 | -1.69E-46 |
| MS.gene051719 | MS.gene070088 | -0.826854 | 2.16E-54 | -1.69E-46 |
| MS.gene051720 | MS.gene070088 | -0.814743 | 1.32E-51 | -1.69E-46 |
| MS.gene051957 | MS.gene070088 | -0.803684 | 3.10E-49 | -1.69E-46 |
| MS.gene052020 | MS.gene070088 | -0.810401 | 1.17E-50 | -1.69E-46 |
| MS.gene052042 | MS.gene070088 | -0.802862 | 4.59E-49 | -1.69E-46 |
| MS.gene052323 | MS.gene070088 | -0.814126 | 1.81E-51 | -1.69E-46 |
| MS.gene052516 | MS.gene070088 | -0.816066 | 6.70E-52 | -1.69E-46 |
| MS.gene052519 | MS.gene070088 | -0.827167 | 1.82E-54 | -1.69E-46 |
| MS.gene052561 | MS.gene070088 | -0.801545 | 8.56E-49 | -1.69E-46 |
| MS.gene052582 | MS.gene070088 | -0.801016 | 1.10E-48 | -1.69E-46 |
| MS.gene052584 | MS.gene070088 | -0.806501 | 7.98E-50 | -1.69E-46 |
| MS.gene052665 | MS.gene070088 | -0.814646 | 1.39E-51 | -1.69E-46 |
| MS.gene052673 | MS.gene070088 | 0.817434 | 3.30E-52 | -1.69E-46 |
| MS.gene052863 | MS.gene070088 | -0.835101 | 2.04E-56 | -1.69E-46 |
| MS.gene052896 | MS.gene070088 | -0.839759 | 1.31E-57 | -1.69E-46 |
| MS.gene053008 | MS.gene070088 | -0.809524 | 1.81E-50 | -1.69E-46 |
| MS.gene053221 | MS.gene070088 | -0.817287 | 3.57E-52 | -1.69E-46 |
| MS.gene05350 | MS.gene070088 | -0.801575 | 8.44E-49 | -1.69E-46 |
| MS.gene053883 | MS.gene070088 | -0.813125 | 3.00E-51 | -1.69E-46 |
| MS.gene05414 | MS.gene070088 | -0.840707 | 7.39E-58 | -1.69E-46 |
| MS.gene05415 | MS.gene070088 | -0.83681 | 7.52E-57 | -1.69E-46 |
| MS.gene054236 | MS.gene070088 | -0.804517 | 2.08E-49 | -1.69E-46 |
| MS.gene05423 | MS.gene070088 | -0.807197 | 5.68E-50 | -1.69E-46 |
| MS.gene054291 | MS.gene070088 | 0.843353 | 1.48E-58 | -1.69E-46 |
| MS.gene054467 | MS.gene070088 | -0.831697 | 1.44E-55 | -1.69E-46 |
| MS.gene054468 | MS.gene070088 | -0.810745 | 9.89E-51 | -1.69E-46 |
| MS.gene054472 | MS.gene070088 | -0.805622 | 1.22E-49 | -1.69E-46 |
| MS.gene05462 | MS.gene070088 | -0.802892 | 4.52E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene070088 | -0.808491 | 3.02E-50 | -1.69E-46 |
| MS.gene05468 | MS.gene070088 | -0.806711 | 7.20E-50 | -1.69E-46 |
| MS.gene054775 | MS.gene070088 | -0.807674 | 4.50E-50 | -1.69E-46 |
| MS.gene055227 | MS.gene070088 | -0.812341 | 4.45E-51 | -1.69E-46 |
| MS.gene055228 | MS.gene070088 | -0.806757 | 7.04E-50 | -1.69E-46 |
| MS.gene055356 | MS.gene070088 | -0.804581 | 2.02E-49 | -1.69E-46 |
| MS.gene055357 | MS.gene070088 | -0.809059 | 2.28E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene070088 | -0.832957 | 7.03E-56 | -1.69E-46 |
| MS.gene055466 | MS.gene070088 | -0.861727 | 8.37E-64 | -1.69E-46 |
| MS.gene055468 | MS.gene070088 | -0.83982 | 1.26E-57 | -1.69E-46 |
| MS.gene055580 | MS.gene070088 | 0.803819 | 2.91E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene070088 | -0.843499 | 1.35E-58 | -1.69E-46 |
| MS.gene055818 | MS.gene070088 | -0.858738 | 6.70E-63 | -1.69E-46 |
| MS.gene055926 | MS.gene070088 | -0.826652 | 2.41E-54 | -1.69E-46 |
| MS.gene056069 | MS.gene070088 | 0.838097 | 3.52E-57 | -1.69E-46 |
| MS.gene056173 | MS.gene070088 | -0.804193 | 2.43E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene070088 | -0.844672 | 6.54E-59 | -1.69E-46 |
| MS.gene056498 | MS.gene070088 | -0.810168 | 1.32E-50 | -1.69E-46 |
| MS.gene057060 | MS.gene070088 | -0.808015 | 3.81E-50 | -1.69E-46 |
| MS.gene057314 | MS.gene070088 | -0.808442 | 3.09E-50 | -1.69E-46 |
| MS.gene057444 | MS.gene070088 | -0.804082 | 2.56E-49 | -1.69E-46 |
| MS.gene057693 | MS.gene070088 | -0.838974 | 2.09E-57 | -1.69E-46 |
| MS.gene057869 | MS.gene070088 | -0.809618 | 1.73E-50 | -1.69E-46 |
| MS.gene057915 | MS.gene070088 | -0.827925 | 1.19E-54 | -1.69E-46 |
| MS.gene058625 | MS.gene070088 | -0.83208 | 1.16E-55 | -1.69E-46 |
| MS.gene058636 | MS.gene070088 | -0.833497 | 5.16E-56 | -1.69E-46 |
| MS.gene059283 | MS.gene070088 | -0.815126 | 1.08E-51 | -1.69E-46 |
| MS.gene05954 | MS.gene070088 | -0.800507 | 1.40E-48 | -1.69E-46 |
| MS.gene059725 | MS.gene070088 | -0.804711 | 1.89E-49 | -1.69E-46 |
| MS.gene059842 | MS.gene070088 | -0.805504 | 1.29E-49 | -1.69E-46 |
| MS.gene060122 | MS.gene070088 | 0.805292 | 1.43E-49 | -1.69E-46 |
| MS.gene060137 | MS.gene070088 | 0.858874 | 6.10E-63 | -1.69E-46 |
| MS.gene060167 | MS.gene070088 | -0.813703 | 2.24E-51 | -1.69E-46 |
| MS.gene060322 | MS.gene070088 | -0.867006 | 1.88E-65 | -1.69E-46 |
| MS.gene060521 | MS.gene070088 | -0.800849 | 1.19E-48 | -1.69E-46 |
| MS.gene06052 | MS.gene070088 | -0.832408 | 9.62E-56 | -1.69E-46 |
| MS.gene060634 | MS.gene070088 | 0.841899 | 3.59E-58 | -1.69E-46 |
| MS.gene060683 | MS.gene070088 | -0.822274 | 2.59E-53 | -1.69E-46 |
| MS.gene060685 | MS.gene070088 | -0.829498 | 4.98E-55 | -1.69E-46 |
| MS.gene060802 | MS.gene070088 | -0.8256 | 4.29E-54 | -1.69E-46 |
| MS.gene060803 | MS.gene070088 | -0.84731 | 1.25E-59 | -1.69E-46 |
| MS.gene061040 | MS.gene070088 | 0.84364 | 1.24E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070088.t1 | MTR_5g026860 | 94.686 | 207 | 11 | 0 | 1 | 207 | 1 | 207 | 3.35e-143 | 403 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070088.t1 | AT4G19140 | 54.497 | 189 | 82 | 1 | 16 | 200 | 14 | 202 | 4.39e-65 | 204 |
Find 54 sgRNAs with CRISPR-Local
Find 341 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTATTGCAGACCTAATTT+TGG | 0.188664 | 5.4:-17767765 | MS.gene070088:CDS |
| GTTGACACAGTACAAATTTA+AGG | 0.236503 | 5.4:-17767733 | MS.gene070088:intron |
| GGGATCTTGTTGGTTGGATT+GGG | 0.262211 | 5.4:+17770108 | None:intergenic |
| ATCTTGTTGGTTGGATTGGG+AGG | 0.290630 | 5.4:+17770111 | None:intergenic |
| GGGGATCTTGTTGGTTGGAT+TGG | 0.305160 | 5.4:+17770107 | None:intergenic |
| TTATATCAAGACAATCTCTT+TGG | 0.318819 | 5.4:-17766522 | MS.gene070088:CDS |
| TGTGGCCGTGTTTGGATTGA+TGG | 0.338693 | 5.4:-17764566 | MS.gene070088:CDS |
| AACCATGCAGCACCAAAATT+AGG | 0.365787 | 5.4:+17767753 | None:intergenic |
| GATTGAAGAGAAACGGGGTT+TGG | 0.371600 | 5.4:+17769944 | None:intergenic |
| CAGTGTGATTGAAGAGAAAC+GGG | 0.372394 | 5.4:+17769938 | None:intergenic |
| ATTGAAGAGAAACGGGGTTT+GGG | 0.377024 | 5.4:+17769945 | None:intergenic |
| GTTGCCGTTATGATTACTAC+TGG | 0.380014 | 5.4:-17768695 | MS.gene070088:CDS |
| TTAATGAGACTTATGATTGC+TGG | 0.386518 | 5.4:-17766572 | MS.gene070088:CDS |
| CTACTGGGCTTCAGTATTCA+AGG | 0.394452 | 5.4:-17768679 | MS.gene070088:intron |
| AGAAGCAAACCCAGAAGAAA+AGG | 0.396236 | 5.4:+17769992 | None:intergenic |
| AAAGCCATTGTGGCCGTGTT+TGG | 0.401112 | 5.4:-17764574 | MS.gene070088:CDS |
| ATGACGCCACCGTTCCTTTG+AGG | 0.439744 | 5.4:+17770079 | None:intergenic |
| GACTCGTCATCGTTTGTAAC+GGG | 0.444353 | 5.4:+17764626 | None:intergenic |
| GCAGTGTGATTGAAGAGAAA+CGG | 0.444575 | 5.4:+17769937 | None:intergenic |
| GTCTTGATATAAATGTACTT+TGG | 0.456814 | 5.4:+17766533 | None:intergenic |
| TGACGCCACCGTTCCTTTGA+GGG | 0.463309 | 5.4:+17770080 | None:intergenic |
| GGGGTTTGGGACAGAGAAAT+CGG | 0.468687 | 5.4:+17769958 | None:intergenic |
| TATGATTGCTGGTACACATC+TGG | 0.469215 | 5.4:-17766561 | MS.gene070088:CDS |
| CCACCGTTCCTTTGAGGGCG+AGG | 0.482640 | 5.4:+17770085 | None:intergenic |
| CACCGTTCCTTTGAGGGCGA+GGG | 0.485068 | 5.4:+17770086 | None:intergenic |
| CGCTTTCGTCATACTCCGAT+GGG | 0.494361 | 5.4:-17770056 | MS.gene070088:CDS |
| TCTTGTTGGTTGGATTGGGA+GGG | 0.497294 | 5.4:+17770112 | None:intergenic |
| TCGCTTTCGTCATACTCCGA+TGG | 0.502866 | 5.4:-17770057 | MS.gene070088:CDS |
| CAAACCCAGAAGAAAAGGAA+TGG | 0.516824 | 5.4:+17769997 | None:intergenic |
| TAGGTCTGCAATAAAGAGGA+AGG | 0.535921 | 5.4:+17767772 | None:intergenic |
| ACCGTTCCTTTGAGGGCGAG+GGG | 0.536382 | 5.4:+17770087 | None:intergenic |
| TAAAGAGGAAGGGCTTCACT+TGG | 0.537829 | 5.4:+17767783 | None:intergenic |
| ATTGTTAAATTATAAAGCAA+AGG | 0.550872 | 5.4:-17768751 | MS.gene070088:CDS |
| TTGCCGTTATGATTACTACT+GGG | 0.554261 | 5.4:-17768694 | MS.gene070088:CDS |
| GGATTGGGAGGGAGAATCCA+TGG | 0.563538 | 5.4:+17770123 | None:intergenic |
| ATGGAGAATAAGAAAACGAA+GGG | 0.567010 | 5.4:+17770016 | None:intergenic |
| AAATTAGGTCTGCAATAAAG+AGG | 0.570499 | 5.4:+17767768 | None:intergenic |
| TGACTCGTCATCGTTTGTAA+CGG | 0.573021 | 5.4:+17764625 | None:intergenic |
| GGACAGAGAAATCGGAAATG+AGG | 0.573862 | 5.4:+17769966 | None:intergenic |
| CACTGCAAAATCGTCTCCAC+CGG | 0.586728 | 5.4:-17769920 | MS.gene070088:intron |
| CAATCCAAACACGGCCACAA+TGG | 0.590389 | 5.4:+17764570 | None:intergenic |
| CAGTGTTGTAAAAGCCATTG+TGG | 0.594467 | 5.4:-17764584 | MS.gene070088:CDS |
| AATGGAGAATAAGAAAACGA+AGG | 0.598406 | 5.4:+17770015 | None:intergenic |
| GAGACAAGTTGCGTTTGCTG+AGG | 0.604805 | 5.4:-17767808 | MS.gene070088:CDS |
| TCATCTAAGATTTGTGAACT+CGG | 0.610695 | 5.4:-17768774 | MS.gene070088:CDS |
| CCGTTCCTTTGAGGGCGAGG+GGG | 0.622783 | 5.4:+17770088 | None:intergenic |
| AGGTCTGCAATAAAGAGGAA+GGG | 0.628812 | 5.4:+17767773 | None:intergenic |
| AAGCCCAGTAGTAATCATAA+CGG | 0.636251 | 5.4:+17768691 | None:intergenic |
| TAGTAGACTGCTCATCAGCA+CGG | 0.653496 | 5.4:+17766496 | None:intergenic |
| ATAGAATTGCGATAACCCAT+CGG | 0.655797 | 5.4:+17770041 | None:intergenic |
| TCATTCCATCAATCCAAACA+CGG | 0.674171 | 5.4:+17764561 | None:intergenic |
| CCTCGCCCTCAAAGGAACGG+TGG | 0.677941 | 5.4:-17770085 | MS.gene070088:CDS |
| AGATTGTACAATATTATACC+CGG | 0.692024 | 5.4:-17766467 | MS.gene070088:intron |
| AGTGTGATTGAAGAGAAACG+GGG | 0.780517 | 5.4:+17769939 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GGTATTTTTTATTTTTATTT+TGG | - | chr5.4:17769409-17769428 | MS.gene070088:intron | 10.0% |
| !! | AAAATAAGTGCTATAATATT+GGG | + | chr5.4:17769793-17769812 | None:intergenic | 15.0% |
| !! | AAATTATAAATTGTTCATAG+TGG | - | chr5.4:17769335-17769354 | MS.gene070088:intron | 15.0% |
| !! | AATATTATGTTCATTAATAC+TGG | - | chr5.4:17769994-17770013 | MS.gene070088:CDS | 15.0% |
| !! | ATTGTTAAATTATAAAGCAA+AGG | - | chr5.4:17765931-17765950 | MS.gene070088:intron | 15.0% |
| !! | TAAATTGAATAGAAGAAAAA+AGG | + | chr5.4:17767627-17767646 | None:intergenic | 15.0% |
| !! | TGGCAAAAAAAAAAAAAAAT+TGG | - | chr5.4:17768837-17768856 | MS.gene070088:intron | 15.0% |
| !! | TTCCATATTAGTATAATTAA+GGG | - | chr5.4:17767177-17767196 | MS.gene070088:intron | 15.0% |
| !!! | ACATTTTTCTCAAAAATAAT+AGG | + | chr5.4:17768991-17769010 | None:intergenic | 15.0% |
| !!! | CTATGAACAATTTATAATTT+TGG | + | chr5.4:17769335-17769354 | None:intergenic | 15.0% |
| !!! | TGGAATATTTTTTCATTATT+TGG | - | chr5.4:17765303-17765322 | MS.gene070088:intron | 15.0% |
| !!! | TGTTATTTCTAGATTTAAAA+TGG | - | chr5.4:17768940-17768959 | MS.gene070088:intron | 15.0% |
| !! | AAAATAAACGAACTTAAAGT+TGG | + | chr5.4:17768396-17768415 | None:intergenic | 20.0% |
| !! | AAAATATTCCATGATATTGT+TGG | + | chr5.4:17765294-17765313 | None:intergenic | 20.0% |
| !! | AACAAACAAGTTCATTATAA+AGG | - | chr5.4:17766169-17766188 | MS.gene070088:intron | 20.0% |
| !! | AACCCTTAATTATACTAATA+TGG | + | chr5.4:17767182-17767201 | None:intergenic | 20.0% |
| !! | AATAGTGATAGAAAAGATTA+TGG | + | chr5.4:17767324-17767343 | None:intergenic | 20.0% |
| !! | AATTAATTGGTTGTCATATA+TGG | + | chr5.4:17766728-17766747 | None:intergenic | 20.0% |
| !! | AGAATTAACAATACCTAAAT+TGG | + | chr5.4:17766045-17766064 | None:intergenic | 20.0% |
| !! | ATAAGTTGTTTATTCAAAAC+AGG | - | chr5.4:17765222-17765241 | MS.gene070088:intron | 20.0% |
| !! | ATGTACATGTATAAGTTAAT+AGG | + | chr5.4:17769459-17769478 | None:intergenic | 20.0% |
| !! | ATTAATTGGTTGTCATATAT+GGG | + | chr5.4:17766727-17766746 | None:intergenic | 20.0% |
| !! | CAAAATAAGTGCTATAATAT+TGG | + | chr5.4:17769794-17769813 | None:intergenic | 20.0% |
| !! | CATAAAAGATATGAATATCA+TGG | + | chr5.4:17765715-17765734 | None:intergenic | 20.0% |
| !! | CTTCCATATTAGTATAATTA+AGG | - | chr5.4:17767176-17767195 | MS.gene070088:intron | 20.0% |
| !! | GAAAAAAATAGAAAACTAAC+CGG | + | chr5.4:17764784-17764803 | None:intergenic | 20.0% |
| !! | GATAACATTATTGAAGTTAT+AGG | + | chr5.4:17767942-17767961 | None:intergenic | 20.0% |
| !! | GTATATTAGATTATCTCTTA+AGG | - | chr5.4:17767090-17767109 | MS.gene070088:intron | 20.0% |
| !! | TAAGTTGTTTATTCAAAACA+GGG | - | chr5.4:17765223-17765242 | MS.gene070088:intron | 20.0% |
| !! | TAATAGGAAGACAAAAATAT+TGG | + | chr5.4:17769443-17769462 | None:intergenic | 20.0% |
| !! | TAATTTGAATCTCAATTTAG+AGG | - | chr5.4:17765510-17765529 | MS.gene070088:intron | 20.0% |
| !! | TACTTACTTAACTAAATCTA+AGG | + | chr5.4:17764868-17764887 | None:intergenic | 20.0% |
| !! | TAGCTTATTCCAAATAAAAA+TGG | - | chr5.4:17766400-17766419 | MS.gene070088:intron | 20.0% |
| !! | TATAGAAATAGCTAATTCTT+GGG | - | chr5.4:17765176-17765195 | MS.gene070088:intron | 20.0% |
| !! | TATGAGTATTACTAATCAAA+CGG | + | chr5.4:17765779-17765798 | None:intergenic | 20.0% |
| !! | TCTTTCTCATTTATTATACT+AGG | - | chr5.4:17768087-17768106 | MS.gene070088:intron | 20.0% |
| !! | TTATAGAAATAGCTAATTCT+TGG | - | chr5.4:17765175-17765194 | MS.gene070088:intron | 20.0% |
| !!! | AAAAAAAAAATGCAAGCTTT+TGG | - | chr5.4:17769967-17769986 | MS.gene070088:CDS | 20.0% |
| !!! | AAATTATTGGTTTTCAGATA+AGG | - | chr5.4:17769502-17769521 | MS.gene070088:intron | 20.0% |
| !!! | AACAAAGTTTGTTTAAAGAA+TGG | + | chr5.4:17769182-17769201 | None:intergenic | 20.0% |
| !!! | AATTATTGGTTTTCAGATAA+GGG | - | chr5.4:17769503-17769522 | MS.gene070088:intron | 20.0% |
| !!! | ACAAAGTTTGTTTAAAGAAT+GGG | + | chr5.4:17769181-17769200 | None:intergenic | 20.0% |
| !!! | ATAGGTTGATAAATGTTATT+TGG | + | chr5.4:17766690-17766709 | None:intergenic | 20.0% |
| !!! | CAATATTATAGCACTTATTT+TGG | - | chr5.4:17769792-17769811 | MS.gene070088:intron | 20.0% |
| !!! | GAGTAATTTTTGTAGTTATT+TGG | + | chr5.4:17766283-17766302 | None:intergenic | 20.0% |
| !!! | TTTTTTTCTGAAGTAATAAC+AGG | + | chr5.4:17769953-17769972 | None:intergenic | 20.0% |
| ! | AAATACCTTGAATTATGAGT+AGG | + | chr5.4:17767241-17767260 | None:intergenic | 25.0% |
| ! | AACAAACTTTGTTGAAAACA+AGG | - | chr5.4:17769189-17769208 | MS.gene070088:intron | 25.0% |
| ! | AAGACTTTGAATTGTGAATA+TGG | + | chr5.4:17767890-17767909 | None:intergenic | 25.0% |
| ! | AAGTTATAGGCTTTCAAAAA+AGG | + | chr5.4:17767929-17767948 | None:intergenic | 25.0% |
| ! | AATACCTTGAATTATGAGTA+GGG | + | chr5.4:17767240-17767259 | None:intergenic | 25.0% |
| ! | ACATTCATGATTTATTACAC+AGG | + | chr5.4:17765446-17765465 | None:intergenic | 25.0% |
| ! | ACATTCCAACTAGAAATAAT+AGG | + | chr5.4:17769039-17769058 | None:intergenic | 25.0% |
| ! | ACTTCAGATTCTAATCAAAT+AGG | + | chr5.4:17767156-17767175 | None:intergenic | 25.0% |
| ! | AGATTGTACAATATTATACC+CGG | - | chr5.4:17768215-17768234 | MS.gene070088:intron | 25.0% |
| ! | AGTCAAATATTAAGCAGATT+GGG | + | chr5.4:17768261-17768280 | None:intergenic | 25.0% |
| ! | AGTTTGTGTTAGCTAATATA+TGG | - | chr5.4:17766753-17766772 | MS.gene070088:intron | 25.0% |
| ! | ATAGGCTTACCAAAAATAAT+AGG | + | chr5.4:17769021-17769040 | None:intergenic | 25.0% |
| ! | ATCAATATAAAACTTGGCAA+CGG | + | chr5.4:17767347-17767366 | None:intergenic | 25.0% |
| ! | ATGCTAAAGTAATATCAAGT+TGG | + | chr5.4:17767032-17767051 | None:intergenic | 25.0% |
| ! | ATTCATGGTTTATTACACAA+GGG | + | chr5.4:17764917-17764936 | None:intergenic | 25.0% |
| ! | CATTAATAGTAATCAGTGAA+AGG | - | chr5.4:17766479-17766498 | MS.gene070088:CDS | 25.0% |
| ! | CATTCATGATTTATTACACA+GGG | + | chr5.4:17765445-17765464 | None:intergenic | 25.0% |
| ! | CTTCAGATTCTAATCAAATA+GGG | + | chr5.4:17767155-17767174 | None:intergenic | 25.0% |
| ! | GAGGAACATAATAAAAGTTA+TGG | + | chr5.4:17769600-17769619 | None:intergenic | 25.0% |
| ! | GCTTATAGATTATACGAAAA+CGG | - | chr5.4:17765132-17765151 | MS.gene070088:intron | 25.0% |
| ! | GTCTATATAACTATAAACCT+AGG | - | chr5.4:17766775-17766794 | MS.gene070088:intron | 25.0% |
| ! | GTCTTGATATAAATGTACTT+TGG | + | chr5.4:17768152-17768171 | None:intergenic | 25.0% |
| ! | GTTTATGTTAACATTGTTTC+AGG | - | chr5.4:17766823-17766842 | MS.gene070088:intron | 25.0% |
| ! | TAAAATGTCCAACAATATCA+TGG | - | chr5.4:17765283-17765302 | MS.gene070088:intron | 25.0% |
| ! | TAGGCTTACCAAAAATAATA+GGG | + | chr5.4:17769020-17769039 | None:intergenic | 25.0% |
| ! | TAGTTATTGTATATGGGAAA+AGG | - | chr5.4:17769741-17769760 | MS.gene070088:intron | 25.0% |
| ! | TCTACTCCAATTATAATACA+CGG | + | chr5.4:17769846-17769865 | None:intergenic | 25.0% |
| ! | TGTGTAATAAATCATGAATG+TGG | - | chr5.4:17765445-17765464 | MS.gene070088:intron | 25.0% |
| ! | TGTTCAAAACAAAAAAAGTG+TGG | - | chr5.4:17765349-17765368 | MS.gene070088:intron | 25.0% |
| ! | TTAGATTATCTCTTAAGGTT+AGG | - | chr5.4:17767095-17767114 | MS.gene070088:intron | 25.0% |
| ! | TTATAACTTCTTGCCAATTT+AGG | - | chr5.4:17766029-17766048 | MS.gene070088:intron | 25.0% |
| ! | TTATATCAAGACAATCTCTT+TGG | - | chr5.4:17768160-17768179 | MS.gene070088:intron | 25.0% |
| ! | TTCGACATACTGAAAAAATA+TGG | - | chr5.4:17768817-17768836 | MS.gene070088:intron | 25.0% |
| !! | AAACAAAAAAAGTGTGGATT+TGG | - | chr5.4:17765355-17765374 | MS.gene070088:intron | 25.0% |
| !! | ATAAACCTAGGTAATTCTTT+TGG | - | chr5.4:17766787-17766806 | MS.gene070088:intron | 25.0% |
| !! | ATTACTTACTTTAGCTTCTA+AGG | - | chr5.4:17764965-17764984 | MS.gene070088:intron | 25.0% |
| !! | ATTTTGTCTTAGTTGTAGTT+TGG | - | chr5.4:17767676-17767695 | MS.gene070088:intron | 25.0% |
| !! | CTTGGTTAGTTATTGTATAT+GGG | - | chr5.4:17769735-17769754 | MS.gene070088:intron | 25.0% |
| !! | GTGAAAATCCCTATTATTTT+TGG | - | chr5.4:17769009-17769028 | MS.gene070088:intron | 25.0% |
| !! | TAAACCTAGGTAATTCTTTT+GGG | - | chr5.4:17766788-17766807 | MS.gene070088:intron | 25.0% |
| !!! | ATTCTGCAACCATTTTTATT+TGG | + | chr5.4:17766412-17766431 | None:intergenic | 25.0% |
| !!! | CAAATTGGTTTTAGATAAAG+AGG | + | chr5.4:17767277-17767296 | None:intergenic | 25.0% |
| !!! | GCTATTTTGAGTGTTTTTTT+TGG | - | chr5.4:17765589-17765608 | MS.gene070088:intron | 25.0% |
| !!! | GGGTGTAGATATTTTTTATT+TGG | + | chr5.4:17768658-17768677 | None:intergenic | 25.0% |
| !!! | GTCAATTAATTTGTCAGAAA+AGG | - | chr5.4:17765678-17765697 | MS.gene070088:intron | 25.0% |
| !!! | GTTGACATCTTTTTTTCAAA+AGG | - | chr5.4:17768894-17768913 | MS.gene070088:intron | 25.0% |
| !!! | TAAGAAGTTTTGAGATGAAT+GGG | - | chr5.4:17765816-17765835 | MS.gene070088:intron | 25.0% |
| !!! | TTAAGAAGTTTTGAGATGAA+TGG | - | chr5.4:17765815-17765834 | MS.gene070088:intron | 25.0% |
| !!! | TTTAGCTTCTAAGGTTAATT+GGG | - | chr5.4:17764974-17764993 | MS.gene070088:intron | 25.0% |
| AAAAATAGAAAACTAACCGG+TGG | + | chr5.4:17764781-17764800 | None:intergenic | 30.0% | |
| AAACTAATCAACCACATTCA+TGG | + | chr5.4:17764932-17764951 | None:intergenic | 30.0% | |
| AAAGTGCATCTCTTACTTTA+GGG | + | chr5.4:17768457-17768476 | None:intergenic | 30.0% | |
| AAATGAAAAGATGTGAGACT+GGG | + | chr5.4:17769076-17769095 | None:intergenic | 30.0% | |
| AAATTAGGTCTGCAATAAAG+AGG | + | chr5.4:17766917-17766936 | None:intergenic | 30.0% | |
| AACATTGAATGAGATATCAG+TGG | + | chr5.4:17768587-17768606 | None:intergenic | 30.0% | |
| AACCAAAAACTTGACTGTTT+AGG | - | chr5.4:17766566-17766585 | MS.gene070088:CDS | 30.0% | |
| AAGCACTTGTGATACTATTT+GGG | - | chr5.4:17765037-17765056 | MS.gene070088:intron | 30.0% | |
| AATGGAGAATAAGAAAACGA+AGG | + | chr5.4:17764670-17764689 | None:intergenic | 30.0% | |
| AATGTAAGTAATCTCAACTG+CGG | + | chr5.4:17765484-17765503 | None:intergenic | 30.0% | |
| ACACTTAAATCTCAAGCAAA+GGG | - | chr5.4:17768424-17768443 | MS.gene070088:intron | 30.0% | |
| ACTATACATGACTTCCTTAT+TGG | + | chr5.4:17769891-17769910 | None:intergenic | 30.0% | |
| AGAAGAAAAAAGGATAGATC+TGG | + | chr5.4:17767617-17767636 | None:intergenic | 30.0% | |
| AGGAAATAAATGTACTTTCC+AGG | + | chr5.4:17766246-17766265 | None:intergenic | 30.0% | |
| AGTGATAGAAAAGATTATGG+AGG | + | chr5.4:17767321-17767340 | None:intergenic | 30.0% | |
| ATAGAAAAGATTATGGAGGA+TGG | + | chr5.4:17767317-17767336 | None:intergenic | 30.0% | |
| ATCAACCAATAAAACCGTAA+AGG | + | chr5.4:17767512-17767531 | None:intergenic | 30.0% | |
| ATGAAGATAGAAGTTGTTTG+AGG | + | chr5.4:17769619-17769638 | None:intergenic | 30.0% | |
| ATGCGCATCAACATAATAAA+GGG | - | chr5.4:17769233-17769252 | MS.gene070088:intron | 30.0% | |
| ATGGAGAATAAGAAAACGAA+GGG | + | chr5.4:17764669-17764688 | None:intergenic | 30.0% | |
| CAACAATGACAAAACAATTG+TGG | + | chr5.4:17767813-17767832 | None:intergenic | 30.0% | |
| CACAAACTTGCACAATTAAT+TGG | + | chr5.4:17766741-17766760 | None:intergenic | 30.0% | |
| CAGTCAAATATTAAGCAGAT+TGG | + | chr5.4:17768262-17768281 | None:intergenic | 30.0% | |
| CATAAAGAACTAACTAGAGA+GGG | + | chr5.4:17768678-17768697 | None:intergenic | 30.0% | |
| CATTCATGGTTTATTACACA+AGG | + | chr5.4:17764918-17764937 | None:intergenic | 30.0% | |
| CCTTAACAATGACTATGAAA+AGG | - | chr5.4:17766135-17766154 | MS.gene070088:intron | 30.0% | |
| CTACTCCAATTATAATACAC+GGG | + | chr5.4:17769845-17769864 | None:intergenic | 30.0% | |
| GAAGAAAAAAGGATAGATCT+GGG | + | chr5.4:17767616-17767635 | None:intergenic | 30.0% | |
| GATTACATGCTATATAAAGC+TGG | - | chr5.4:17769105-17769124 | MS.gene070088:intron | 30.0% | |
| GGAAATAAATGTACTTTCCA+GGG | + | chr5.4:17766245-17766264 | None:intergenic | 30.0% | |
| GGATATAGCTCAAAATTCAT+TGG | + | chr5.4:17769160-17769179 | None:intergenic | 30.0% | |
| GTCCAGATCAATATAAAACT+TGG | + | chr5.4:17767353-17767372 | None:intergenic | 30.0% | |
| GTTGACACAGTACAAATTTA+AGG | - | chr5.4:17766949-17766968 | MS.gene070088:intron | 30.0% | |
| GTTGTCACAATTTAAACTGA+TGG | + | chr5.4:17768792-17768811 | None:intergenic | 30.0% | |
| TAAAGTGCATCTCTTACTTT+AGG | + | chr5.4:17768458-17768477 | None:intergenic | 30.0% | |
| TAAATGAAAAGATGTGAGAC+TGG | + | chr5.4:17769077-17769096 | None:intergenic | 30.0% | |
| TAAGCACTTGTGATACTATT+TGG | - | chr5.4:17765036-17765055 | MS.gene070088:intron | 30.0% | |
| TAATACTATCTGTATGCTAC+AGG | + | chr5.4:17766525-17766544 | None:intergenic | 30.0% | |
| TACCATTTACTAGTCATTAG+AGG | - | chr5.4:17768035-17768054 | MS.gene070088:intron | 30.0% | |
| TAGAAAAGATTATGGAGGAT+GGG | + | chr5.4:17767316-17767335 | None:intergenic | 30.0% | |
| TATACATGTACATCGTATCA+GGG | - | chr5.4:17769466-17769485 | MS.gene070088:intron | 30.0% | |
| TATGTTAACATTGTTTCAGG+TGG | - | chr5.4:17766826-17766845 | MS.gene070088:intron | 30.0% | |
| TATTGGGAATCTGAAAATCT+CGG | + | chr5.4:17769777-17769796 | None:intergenic | 30.0% | |
| TCAACCAATAAAACCGTAAA+GGG | + | chr5.4:17767511-17767530 | None:intergenic | 30.0% | |
| TGAATCCCGTGTATTATAAT+TGG | - | chr5.4:17769837-17769856 | MS.gene070088:intron | 30.0% | |
| TGTATGATTCTGAACCAAAT+AGG | + | chr5.4:17766650-17766669 | None:intergenic | 30.0% | |
| TGTGTAATAAACCATGAATG+TGG | - | chr5.4:17764918-17764937 | MS.gene070088:intron | 30.0% | |
| TTAATGAGACTTATGATTGC+TGG | - | chr5.4:17768110-17768129 | MS.gene070088:intron | 30.0% | |
| TTACTTGAAGATGGAGAAAA+AGG | - | chr5.4:17768722-17768741 | MS.gene070088:CDS | 30.0% | |
| TTATACATGTACATCGTATC+AGG | - | chr5.4:17769465-17769484 | MS.gene070088:intron | 30.0% | |
| ! | ACACAGTACAAATTTAAGGT+GGG | - | chr5.4:17766953-17766972 | MS.gene070088:intron | 30.0% |
| ! | ATAAATGGTAGTGAAACCAA+AGG | + | chr5.4:17767565-17767584 | None:intergenic | 30.0% |
| ! | ATCTAAAACCAATTTGAGCA+TGG | - | chr5.4:17767281-17767300 | MS.gene070088:intron | 30.0% |
| ! | ATCTTTTATGAGCTAACGAT+TGG | - | chr5.4:17765725-17765744 | MS.gene070088:intron | 30.0% |
| ! | CATCAAGTTTTTGTTCTTCT+CGG | - | chr5.4:17767430-17767449 | MS.gene070088:intron | 30.0% |
| ! | CCTTTTCATAGTCATTGTTA+AGG | + | chr5.4:17766138-17766157 | None:intergenic | 30.0% |
| ! | CTTTATTGCAGACCTAATTT+TGG | - | chr5.4:17766917-17766936 | MS.gene070088:intron | 30.0% |
| ! | GCTTGGTTAGTTATTGTATA+TGG | - | chr5.4:17769734-17769753 | MS.gene070088:intron | 30.0% |
| ! | TACTTGCTAGAAGAAAAACA+AGG | - | chr5.4:17766084-17766103 | MS.gene070088:intron | 30.0% |
| ! | TATTGCATACTCATCTTTTG+TGG | - | chr5.4:17769712-17769731 | MS.gene070088:intron | 30.0% |
| ! | TCATCTAAGATTTGTGAACT+CGG | - | chr5.4:17765908-17765927 | MS.gene070088:intron | 30.0% |
| ! | TGTCAACTGAACATTTTTCA+CGG | + | chr5.4:17768881-17768900 | None:intergenic | 30.0% |
| !! | ACTAGCTTTCATATAGATCT+AGG | - | chr5.4:17769388-17769407 | MS.gene070088:intron | 30.0% |
| !! | AGTTATTTGGTGTATTCAGA+TGG | + | chr5.4:17766270-17766289 | None:intergenic | 30.0% |
| !! | CTTTAGCTTCTAAGGTTAAT+TGG | - | chr5.4:17764973-17764992 | MS.gene070088:intron | 30.0% |
| !! | GAATACAAAGATCACTTTTC+AGG | - | chr5.4:17766848-17766867 | MS.gene070088:intron | 30.0% |
| !! | GTAAGCCTATTATTTCTAGT+TGG | - | chr5.4:17769031-17769050 | MS.gene070088:intron | 30.0% |
| !! | TCAGTGAAAGGAGTTTTAAT+CGG | - | chr5.4:17766491-17766510 | MS.gene070088:CDS | 30.0% |
| !! | TGCACAATCATTTTTCTTAC+AGG | - | chr5.4:17765872-17765891 | MS.gene070088:intron | 30.0% |
| !! | TGCCAAGTTTTATATTGATC+TGG | - | chr5.4:17767348-17767367 | MS.gene070088:intron | 30.0% |
| !! | TTAGCTTCTAAGGTTAATTG+GGG | - | chr5.4:17764975-17764994 | MS.gene070088:intron | 30.0% |
| !!! | AAACAGTCAAGTTTTTGGTT+TGG | + | chr5.4:17766566-17766585 | None:intergenic | 30.0% |
| !!! | AAGAAGTTTTGAGATGAATG+GGG | - | chr5.4:17765817-17765836 | MS.gene070088:intron | 30.0% |
| !!! | AGAGGAGTTTGTTAAGTTTT+TGG | - | chr5.4:17765528-17765547 | MS.gene070088:intron | 30.0% |
| !!! | TTCTTTTGGGTTGTTGTAAA+TGG | - | chr5.4:17766801-17766820 | MS.gene070088:intron | 30.0% |
| AAAACAAGGCATGAGTAAGA+AGG | - | chr5.4:17766098-17766117 | MS.gene070088:intron | 35.0% | |
| AAGCCCAGTAGTAATCATAA+CGG | + | chr5.4:17765994-17766013 | None:intergenic | 35.0% | |
| AAGGTTAATTGGGGATTGTT+TGG | - | chr5.4:17764984-17765003 | MS.gene070088:intron | 35.0% | |
| ACAACCCAAAAGAATTACCT+AGG | + | chr5.4:17766795-17766814 | None:intergenic | 35.0% | |
| ACAAGTATGCAAAGCAAGAA+AGG | + | chr5.4:17766627-17766646 | None:intergenic | 35.0% | |
| AGATGTTGAGAATCCAGATA+TGG | + | chr5.4:17769570-17769589 | None:intergenic | 35.0% | |
| ATAGAATTGCGATAACCCAT+CGG | + | chr5.4:17764644-17764663 | None:intergenic | 35.0% | |
| ATTGTATATGGGAAAAGGCT+TGG | - | chr5.4:17769746-17769765 | MS.gene070088:intron | 35.0% | |
| CAAACCCTACTCATAATTCA+AGG | - | chr5.4:17767233-17767252 | MS.gene070088:intron | 35.0% | |
| CAAAGCAAGAAAGGTCATAA+AGG | + | chr5.4:17766618-17766637 | None:intergenic | 35.0% | |
| CAAATGTCGAATCTTAAGTG+AGG | + | chr5.4:17767740-17767759 | None:intergenic | 35.0% | |
| CATTTCCATTTCTTTGTTCG+CGG | + | chr5.4:17768922-17768941 | None:intergenic | 35.0% | |
| CCAATAATTTATCGTCTCCA+TGG | + | chr5.4:17769492-17769511 | None:intergenic | 35.0% | |
| CCATAAAGAACTAACTAGAG+AGG | + | chr5.4:17768679-17768698 | None:intergenic | 35.0% | |
| CCATGGAGACGATAAATTAT+TGG | - | chr5.4:17769489-17769508 | MS.gene070088:intron | 35.0% | |
| CTTTGCATACTTGTCCTATT+TGG | - | chr5.4:17766633-17766652 | MS.gene070088:intron | 35.0% | |
| GACACAGTACAAATTTAAGG+TGG | - | chr5.4:17766952-17766971 | MS.gene070088:intron | 35.0% | |
| GACACTTAAATCTCAAGCAA+AGG | - | chr5.4:17768423-17768442 | MS.gene070088:intron | 35.0% | |
| GACCTCTAATGACTAGTAAA+TGG | + | chr5.4:17768040-17768059 | None:intergenic | 35.0% | |
| GATGCGCATCAACATAATAA+AGG | - | chr5.4:17769232-17769251 | MS.gene070088:intron | 35.0% | |
| GGTGTTTGACATAATGAATG+AGG | + | chr5.4:17767973-17767992 | None:intergenic | 35.0% | |
| TAAATCTCAAGCAAAGGGTT+TGG | - | chr5.4:17768429-17768448 | MS.gene070088:intron | 35.0% | |
| TAATCAAACGGATATGAGAG+TGG | + | chr5.4:17765767-17765786 | None:intergenic | 35.0% | |
| TACTAGTCATTAGAGGTCTT+TGG | - | chr5.4:17768042-17768061 | MS.gene070088:intron | 35.0% | |
| TAGTTGGAATGTTACTGAAC+TGG | - | chr5.4:17769047-17769066 | MS.gene070088:intron | 35.0% | |
| TATTTCCCACCTCCAAAAAT+TGG | + | chr5.4:17769537-17769556 | None:intergenic | 35.0% | |
| TATTTGGAGATTTGACTCCT+AGG | + | chr5.4:17768642-17768661 | None:intergenic | 35.0% | |
| TCATTCCATCAATCCAAACA+CGG | + | chr5.4:17770124-17770143 | None:intergenic | 35.0% | |
| TTGCCGTTATGATTACTACT+GGG | - | chr5.4:17765988-17766007 | MS.gene070088:intron | 35.0% | |
| ! | AAGTTATCTACAAGAGCGTA+TGG | + | chr5.4:17765103-17765122 | None:intergenic | 35.0% |
| ! | ACTTGATGATCAAAGCGAAA+TGG | + | chr5.4:17767418-17767437 | None:intergenic | 35.0% |
| ! | AGAGCAGTATGCTAAGATTT+TGG | - | chr5.4:17765259-17765278 | MS.gene070088:intron | 35.0% |
| ! | ATTCTCCATTCCTTTTCTTC+TGG | - | chr5.4:17764680-17764699 | MS.gene070088:intron | 35.0% |
| ! | CACAGTACAAATTTAAGGTG+GGG | - | chr5.4:17766954-17766973 | MS.gene070088:intron | 35.0% |
| ! | CACCTAAACAGTCAAGTTTT+TGG | + | chr5.4:17766571-17766590 | None:intergenic | 35.0% |
| ! | CCTCTCTAGTTAGTTCTTTA+TGG | - | chr5.4:17768676-17768695 | MS.gene070088:intron | 35.0% |
| ! | GTCAACTGAACATTTTTCAC+GGG | + | chr5.4:17768880-17768899 | None:intergenic | 35.0% |
| ! | TATCAAAGACCACAAGTTGA+AGG | + | chr5.4:17766980-17766999 | None:intergenic | 35.0% |
| ! | TCAACTGAACATTTTTCACG+GGG | + | chr5.4:17768879-17768898 | None:intergenic | 35.0% |
| ! | TTCTCCATTCCTTTTCTTCT+GGG | - | chr5.4:17764681-17764700 | MS.gene070088:intron | 35.0% |
| !! | AAAAGTATCCATGCTGCAAA+CGG | + | chr5.4:17769650-17769669 | None:intergenic | 35.0% |
| !! | ATAATACTTGGTGCCATATC+TGG | - | chr5.4:17769554-17769573 | MS.gene070088:intron | 35.0% |
| !! | ATTTGGTGTATTCAGATGGA+AGG | + | chr5.4:17766266-17766285 | None:intergenic | 35.0% |
| !! | CAGTTGAGTATTGACATCTA+AGG | - | chr5.4:17769306-17769325 | MS.gene070088:intron | 35.0% |
| !! | TTGTCCCTTTACGGTTTTAT+TGG | - | chr5.4:17767504-17767523 | MS.gene070088:intron | 35.0% |
| !!! | AGAAGTTTTGAGATGAATGG+GGG | - | chr5.4:17765818-17765837 | MS.gene070088:intron | 35.0% |
| !!! | ATTGGTTTTCAGATAAGGGA+AGG | - | chr5.4:17769507-17769526 | MS.gene070088:intron | 35.0% |
| !!! | GTTGTTGTTTTGCACATGTT+TGG | - | chr5.4:17767829-17767848 | MS.gene070088:CDS | 35.0% |
| !!! | TTGCAGCATGGATACTTTTT+TGG | - | chr5.4:17769651-17769670 | MS.gene070088:intron | 35.0% |
| AAAGGGACAAGTACAAAGCT+TGG | + | chr5.4:17767494-17767513 | None:intergenic | 40.0% | |
| AAAGTGTGGATTTGGATCAC+TGG | - | chr5.4:17765363-17765382 | MS.gene070088:intron | 40.0% | |
| AACCATGCAGCACCAAAATT+AGG | + | chr5.4:17766932-17766951 | None:intergenic | 40.0% | |
| ACTGACAAGTGACAACACTA+TGG | + | chr5.4:17767994-17768013 | None:intergenic | 40.0% | |
| ACTTCCTTATTGGTGCAGAT+GGG | + | chr5.4:17769881-17769900 | None:intergenic | 40.0% | |
| AGAAGCAAACCCAGAAGAAA+AGG | + | chr5.4:17764693-17764712 | None:intergenic | 40.0% | |
| AGGTCTGCAATAAAGAGGAA+GGG | + | chr5.4:17766912-17766931 | None:intergenic | 40.0% | |
| AGTATCACAAGTGCTTATGC+TGG | + | chr5.4:17765033-17765052 | None:intergenic | 40.0% | |
| AGTGTCCTGCAAGCAATAAA+TGG | + | chr5.4:17767580-17767599 | None:intergenic | 40.0% | |
| AGTGTGATTGAAGAGAAACG+GGG | + | chr5.4:17764746-17764765 | None:intergenic | 40.0% | |
| ATACACGGGATTCAACCAAA+AGG | + | chr5.4:17769831-17769850 | None:intergenic | 40.0% | |
| ATTGAAGAGAAACGGGGTTT+GGG | + | chr5.4:17764740-17764759 | None:intergenic | 40.0% | |
| CAAACCCAGAAGAAAAGGAA+TGG | + | chr5.4:17764688-17764707 | None:intergenic | 40.0% | |
| CACTACCATTTATTGCTTGC+AGG | - | chr5.4:17767572-17767591 | MS.gene070088:intron | 40.0% | |
| CAGATTGGGAAGATAGTGTA+AGG | + | chr5.4:17768247-17768266 | None:intergenic | 40.0% | |
| CAGTGTGATTGAAGAGAAAC+GGG | + | chr5.4:17764747-17764766 | None:intergenic | 40.0% | |
| CAGTGTTGTAAAAGCCATTG+TGG | - | chr5.4:17770098-17770117 | MS.gene070088:CDS | 40.0% | |
| CTTATTTCCCTGCATACTCT+CGG | - | chr5.4:17766308-17766327 | MS.gene070088:intron | 40.0% | |
| GAAGATGGAGAAAAAGGCTT+GGG | - | chr5.4:17768728-17768747 | MS.gene070088:CDS | 40.0% | |
| GCAGTGTGATTGAAGAGAAA+CGG | + | chr5.4:17764748-17764767 | None:intergenic | 40.0% | |
| GCTTTGTACTTGTCCCTTTA+CGG | - | chr5.4:17767495-17767514 | MS.gene070088:intron | 40.0% | |
| GTCTTAGTTGTAGTTTGGCA+CGG | - | chr5.4:17767681-17767700 | MS.gene070088:intron | 40.0% | |
| GTTGCCGTTATGATTACTAC+TGG | - | chr5.4:17765987-17766006 | MS.gene070088:intron | 40.0% | |
| TAGGTCTGCAATAAAGAGGA+AGG | + | chr5.4:17766913-17766932 | None:intergenic | 40.0% | |
| TATGATTGCTGGTACACATC+TGG | - | chr5.4:17768121-17768140 | MS.gene070088:intron | 40.0% | |
| TATGGCCATTCAAATGTGTG+AGG | - | chr5.4:17768694-17768713 | MS.gene070088:CDS | 40.0% | |
| TGAAGATGGAGAAAAAGGCT+TGG | - | chr5.4:17768727-17768746 | MS.gene070088:CDS | 40.0% | |
| TGACTCGTCATCGTTTGTAA+CGG | + | chr5.4:17770060-17770079 | None:intergenic | 40.0% | |
| TGGAGGTGGGAAATAATACT+TGG | - | chr5.4:17769542-17769561 | MS.gene070088:intron | 40.0% | |
| TGTATAACAGCAGCATCTTC+AGG | + | chr5.4:17769266-17769285 | None:intergenic | 40.0% | |
| TTATGAGCTAACGATTGGTG+TGG | - | chr5.4:17765730-17765749 | MS.gene070088:intron | 40.0% | |
| TTGATACCACATTCAGCTTG+TGG | - | chr5.4:17767527-17767546 | MS.gene070088:intron | 40.0% | |
| ! | AGATAGTGTAAGGTACTCAC+CGG | + | chr5.4:17768237-17768256 | None:intergenic | 40.0% |
| ! | CAAAATTCATTGGCTACGAG+AGG | + | chr5.4:17769150-17769169 | None:intergenic | 40.0% |
| ! | CACTTTAGAGAGTAGAGTGT+GGG | - | chr5.4:17768471-17768490 | MS.gene070088:intron | 40.0% |
| ! | CATACTCATCTTTTGTGGCT+TGG | - | chr5.4:17769717-17769736 | MS.gene070088:intron | 40.0% |
| ! | GTTTTCAGATAAGGGAAGGA+GGG | - | chr5.4:17769511-17769530 | MS.gene070088:intron | 40.0% |
| !!! | CAAGTTTTTGGTTTGGACAG+AGG | + | chr5.4:17766559-17766578 | None:intergenic | 40.0% |
| !!! | GAAGTTTTGAGATGAATGGG+GGG | - | chr5.4:17765819-17765838 | MS.gene070088:intron | 40.0% |
| ACACTTTAGCAGGAAAGGTG+TGG | + | chr5.4:17768616-17768635 | None:intergenic | 45.0% | |
| ACATGTGCGCTTGATGAGAA+CGG | + | chr5.4:17769687-17769706 | None:intergenic | 45.0% | |
| ACGAGCCTCACACATTTGAA+TGG | + | chr5.4:17768702-17768721 | None:intergenic | 45.0% | |
| ACTCAGAATCCGTAGTCAGA+TGG | - | chr5.4:17766198-17766217 | MS.gene070088:intron | 45.0% | |
| AGAGATCCACAAGCTGAATG+TGG | + | chr5.4:17767536-17767555 | None:intergenic | 45.0% | |
| AGATGGCCTAGTAAGTACAG+AGG | - | chr5.4:17766215-17766234 | MS.gene070088:intron | 45.0% | |
| AGGTTCCGCGAACAAAGAAA+TGG | - | chr5.4:17768914-17768933 | MS.gene070088:intron | 45.0% | |
| CTACTGGGCTTCAGTATTCA+AGG | - | chr5.4:17766003-17766022 | MS.gene070088:intron | 45.0% | |
| CTTACTAGGCCATCTGACTA+CGG | + | chr5.4:17766210-17766229 | None:intergenic | 45.0% | |
| GAAATGGCGATGGTTCGAAA+AGG | + | chr5.4:17767402-17767421 | None:intergenic | 45.0% | |
| GACTCGTCATCGTTTGTAAC+GGG | + | chr5.4:17770059-17770078 | None:intergenic | 45.0% | |
| GACTTCCTTATTGGTGCAGA+TGG | + | chr5.4:17769882-17769901 | None:intergenic | 45.0% | |
| GAGGCTCGTTTACTTGAAGA+TGG | - | chr5.4:17768713-17768732 | MS.gene070088:CDS | 45.0% | |
| GATTGAAGAGAAACGGGGTT+TGG | + | chr5.4:17764741-17764760 | None:intergenic | 45.0% | |
| GGACAGAGAAATCGGAAATG+AGG | + | chr5.4:17764719-17764738 | None:intergenic | 45.0% | |
| GGCTAAGAGATCAGTTCTCT+TGG | - | chr5.4:17768961-17768980 | MS.gene070088:intron | 45.0% | |
| GGTGTACACTTTAGCAGGAA+AGG | + | chr5.4:17768621-17768640 | None:intergenic | 45.0% | |
| GGTGTTCCTCTGTACTTACT+AGG | + | chr5.4:17766224-17766243 | None:intergenic | 45.0% | |
| GTGGATCTCTCATTTGCCTT+TGG | - | chr5.4:17767546-17767565 | MS.gene070088:intron | 45.0% | |
| TAAAGAGGAAGGGCTTCACT+TGG | + | chr5.4:17766902-17766921 | None:intergenic | 45.0% | |
| TAGTAGACTGCTCATCAGCA+CGG | + | chr5.4:17768189-17768208 | None:intergenic | 45.0% | |
| TCCTAGGTGTACACTTTAGC+AGG | + | chr5.4:17768626-17768645 | None:intergenic | 45.0% | |
| TCCTGCTAAAGTGTACACCT+AGG | - | chr5.4:17768622-17768641 | MS.gene070088:intron | 45.0% | |
| TGATCAAAGCGAAATGGCGA+TGG | + | chr5.4:17767412-17767431 | None:intergenic | 45.0% | |
| TTGTCCCATCTGCACCAATA+AGG | - | chr5.4:17769874-17769893 | MS.gene070088:intron | 45.0% | |
| ! | ATCTTGTTGGTTGGATTGGG+AGG | + | chr5.4:17764574-17764593 | None:intergenic | 45.0% |
| ! | ATTTCCTTCCGAGAGTATGC+AGG | + | chr5.4:17766319-17766338 | None:intergenic | 45.0% |
| ! | CACTTTAGCAGGAAAGGTGT+GGG | + | chr5.4:17768615-17768634 | None:intergenic | 45.0% |
| ! | GATAGTGTAAGGTACTCACC+GGG | + | chr5.4:17768236-17768255 | None:intergenic | 45.0% |
| ! | GCACTTTAGAGAGTAGAGTG+TGG | - | chr5.4:17768470-17768489 | MS.gene070088:intron | 45.0% |
| ! | GGGATCTTGTTGGTTGGATT+GGG | + | chr5.4:17764577-17764596 | None:intergenic | 45.0% |
| ! | GGTTTTCAGATAAGGGAAGG+AGG | - | chr5.4:17769510-17769529 | MS.gene070088:intron | 45.0% |
| ! | TCTTGTTGGTTGGATTGGGA+GGG | + | chr5.4:17764573-17764592 | None:intergenic | 45.0% |
| ! | TGGGAGCATGCTTTCTGTAT+AGG | + | chr5.4:17766708-17766727 | None:intergenic | 45.0% |
| ! | TTTCCTTCCGAGAGTATGCA+GGG | + | chr5.4:17766318-17766337 | None:intergenic | 45.0% |
| !! | GCACGGTTTTGTCTCATGTA+CGG | - | chr5.4:17767698-17767717 | MS.gene070088:intron | 45.0% |
| !! | GGTGAAGTGCTATGACCTTT+TGG | - | chr5.4:17769813-17769832 | MS.gene070088:intron | 45.0% |
| !!! | GACCTAATTTTGGTGCTGCA+TGG | - | chr5.4:17766927-17766946 | MS.gene070088:intron | 45.0% |
| !!! | GTATTTTTTATTTTTATTTT+GGG | - | chr5.4:17769410-17769429 | MS.gene070088:intron | 5.0% |
| AAAGCCATTGTGGCCGTGTT+TGG | - | chr5.4:17770108-17770127 | MS.gene070088:CDS | 50.0% | |
| CAAGTACAAAGCTTGGCCAG+TGG | + | chr5.4:17767487-17767506 | None:intergenic | 50.0% | |
| CAATCCAAACACGGCCACAA+TGG | + | chr5.4:17770115-17770134 | None:intergenic | 50.0% | |
| CACTGCAAAATCGTCTCCAC+CGG | - | chr5.4:17764762-17764781 | MS.gene070088:intron | 50.0% | |
| CCAATTTGAGCATGGCAGAG+TGG | - | chr5.4:17767289-17767308 | MS.gene070088:intron | 50.0% | |
| CCACTCTGCCATGCTCAAAT+TGG | + | chr5.4:17767292-17767311 | None:intergenic | 50.0% | |
| CGCTTTCGTCATACTCCGAT+GGG | - | chr5.4:17764626-17764645 | MS.gene070088:CDS | 50.0% | |
| GGAATCTGAAAATCTCGGCG+AGG | + | chr5.4:17769772-17769791 | None:intergenic | 50.0% | |
| GTAAGTACAGAGGAACACCC+TGG | - | chr5.4:17766225-17766244 | MS.gene070088:intron | 50.0% | |
| TACATCGACCGTTTGCAGCA+TGG | - | chr5.4:17769639-17769658 | MS.gene070088:intron | 50.0% | |
| TCGCTTTCGTCATACTCCGA+TGG | - | chr5.4:17764625-17764644 | MS.gene070088:CDS | 50.0% | |
| TGTACATCGTATCAGGGCCA+TGG | - | chr5.4:17769472-17769491 | MS.gene070088:intron | 50.0% | |
| TGTGGCCGTGTTTGGATTGA+TGG | - | chr5.4:17770116-17770135 | MS.gene070088:CDS | 50.0% | |
| TTTCCCTGCATACTCTCGGA+AGG | - | chr5.4:17766312-17766331 | MS.gene070088:intron | 50.0% | |
| ! | AGGGAAGGAGGGCCAATTTT+TGG | - | chr5.4:17769522-17769541 | MS.gene070088:intron | 50.0% |
| ! | GAGACAAGTTGCGTTTGCTG+AGG | - | chr5.4:17766874-17766893 | MS.gene070088:intron | 50.0% |
| ! | GGGGATCTTGTTGGTTGGAT+TGG | + | chr5.4:17764578-17764597 | None:intergenic | 50.0% |
| ! | GGGGTTTGGGACAGAGAAAT+CGG | + | chr5.4:17764727-17764746 | None:intergenic | 50.0% |
| ! | GGTTTGGACAGAGGTGCATA+AGG | + | chr5.4:17766550-17766569 | None:intergenic | 50.0% |
| !! | GAAGGAGGGCCAATTTTTGG+AGG | - | chr5.4:17769525-17769544 | MS.gene070088:intron | 50.0% |
| !! | GAGGGCCAATTTTTGGAGGT+GGG | - | chr5.4:17769529-17769548 | MS.gene070088:intron | 50.0% |
| AAGGTGGGGCCTTCAACTTG+TGG | - | chr5.4:17766968-17766987 | MS.gene070088:intron | 55.0% | |
| ACAAAGCTTGGCCAGTGGCA+TGG | + | chr5.4:17767482-17767501 | None:intergenic | 55.0% | |
| ATGACGCCACCGTTCCTTTG+AGG | + | chr5.4:17764606-17764625 | None:intergenic | 55.0% | |
| GATCTCCACCCACCAACTCA+AGG | + | chr5.4:17768759-17768778 | None:intergenic | 55.0% | |
| TGACGCCACCGTTCCTTTGA+GGG | + | chr5.4:17764605-17764624 | None:intergenic | 55.0% | |
| !! | CTTAGCCTTGAGTTGGTGGG+TGG | - | chr5.4:17768751-17768770 | MS.gene070088:CDS | 55.0% |
| !! | GAGTTGGTGGGTGGAGATCT+AGG | - | chr5.4:17768760-17768779 | MS.gene070088:CDS | 55.0% |
| !! | GCTTGGGCTTAGCCTTGAGT+TGG | - | chr5.4:17768744-17768763 | MS.gene070088:CDS | 55.0% |
| !! | GGAGGGCCAATTTTTGGAGG+TGG | - | chr5.4:17769528-17769547 | MS.gene070088:intron | 55.0% |
| !! | GGGCTTAGCCTTGAGTTGGT+GGG | - | chr5.4:17768748-17768767 | MS.gene070088:CDS | 55.0% |
| !! | TGGGCTTAGCCTTGAGTTGG+TGG | - | chr5.4:17768747-17768766 | MS.gene070088:CDS | 55.0% |
| AAGATCCCCCTCGCCCTCAA+AGG | - | chr5.4:17764589-17764608 | MS.gene070088:CDS | 60.0% | |
| GCGAGGGGGATCTTGTTGGT+TGG | + | chr5.4:17764583-17764602 | None:intergenic | 60.0% | |
| GGCATGGAGAAAGTGGCGTG+TGG | + | chr5.4:17767466-17767485 | None:intergenic | 60.0% | |
| GGCCAGTGGCATGGAGAAAG+TGG | + | chr5.4:17767473-17767492 | None:intergenic | 60.0% | |
| ! | ACCGTTCCTTTGAGGGCGAG+GGG | + | chr5.4:17764598-17764617 | None:intergenic | 60.0% |
| ! | CACCGTTCCTTTGAGGGCGA+GGG | + | chr5.4:17764599-17764618 | None:intergenic | 60.0% |
| ! | CGCCACTTTCTCCATGCCAC+TGG | - | chr5.4:17767468-17767487 | MS.gene070088:intron | 60.0% |
| CCCCCTCGCCCTCAAAGGAA+CGG | - | chr5.4:17764594-17764613 | MS.gene070088:CDS | 65.0% | |
| CCTCGCCCTCAAAGGAACGG+TGG | - | chr5.4:17764597-17764616 | MS.gene070088:CDS | 65.0% | |
| GAGGGCGAGGGGGATCTTGT+TGG | + | chr5.4:17764587-17764606 | None:intergenic | 65.0% | |
| ! | CCACCGTTCCTTTGAGGGCG+AGG | + | chr5.4:17764600-17764619 | None:intergenic | 65.0% |
| ! | CCGTTCCTTTGAGGGCGAGG+GGG | + | chr5.4:17764597-17764616 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 17764561 | 17770143 | 17764561 | ID=MS.gene070088 |
| chr5.4 | mRNA | 17764561 | 17770143 | 17764561 | ID=MS.gene070088.t1;Parent=MS.gene070088 |
| chr5.4 | exon | 17769921 | 17770143 | 17769921 | ID=MS.gene070088.t1.exon1;Parent=MS.gene070088.t1 |
| chr5.4 | CDS | 17769921 | 17770143 | 17769921 | ID=cds.MS.gene070088.t1;Parent=MS.gene070088.t1 |
| chr5.4 | exon | 17768680 | 17768810 | 17768680 | ID=MS.gene070088.t1.exon2;Parent=MS.gene070088.t1 |
| chr5.4 | CDS | 17768680 | 17768810 | 17768680 | ID=cds.MS.gene070088.t1;Parent=MS.gene070088.t1 |
| chr5.4 | exon | 17767734 | 17767859 | 17767734 | ID=MS.gene070088.t1.exon3;Parent=MS.gene070088.t1 |
| chr5.4 | CDS | 17767734 | 17767859 | 17767734 | ID=cds.MS.gene070088.t1;Parent=MS.gene070088.t1 |
| chr5.4 | exon | 17766468 | 17766595 | 17766468 | ID=MS.gene070088.t1.exon4;Parent=MS.gene070088.t1 |
| chr5.4 | CDS | 17766468 | 17766595 | 17766468 | ID=cds.MS.gene070088.t1;Parent=MS.gene070088.t1 |
| chr5.4 | exon | 17764561 | 17764678 | 17764561 | ID=MS.gene070088.t1.exon5;Parent=MS.gene070088.t1 |
| chr5.4 | CDS | 17764561 | 17764678 | 17764561 | ID=cds.MS.gene070088.t1;Parent=MS.gene070088.t1 |
| Gene Sequence |
| Protein sequence |
