AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene07084


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07084.t1 MTR_7g109870 99.307 433 3 0 1 433 1 433 0.0 893
MS.gene07084.t1 MTR_7g109870 98.398 437 3 1 1 433 1 437 0.0 886
MS.gene07084.t1 MTR_1g086590 69.340 424 102 4 1 412 1 408 0.0 583
MS.gene07084.t1 MTR_1g086590 69.340 424 102 4 1 412 1 408 0.0 582
MS.gene07084.t1 MTR_1g086590 70.529 397 97 3 1 393 1 381 0.0 557
MS.gene07084.t1 MTR_1g086590 68.732 339 86 3 1 335 1 323 1.45e-162 461
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07084.t1 AT2G47210 69.841 441 120 6 2 433 5 441 0.0 607
MS.gene07084.t1 AT2G47210 69.841 441 120 6 2 433 5 441 0.0 607
MS.gene07084.t1 AT2G47210 69.841 441 120 6 2 433 5 441 0.0 607

Find 100 sgRNAs with CRISPR-Local

Find 343 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATACCAATATACCTGTTTC+TGG 0.156332 7.2:+6207069 None:intergenic
ATTCCCGATTCGTTGAATTT+TGG 0.213340 7.2:-6206647 MS.gene07084:CDS
CTTGCCAGGGCTGCATCTTC+CGG 0.253582 7.2:-6209904 MS.gene07084:CDS
TTTCTCTTGTTGTCTTGTTT+GGG 0.260220 7.2:+6209645 None:intergenic
ATTTCTTGTGAAACATTATA+TGG 0.283878 7.2:+6209700 None:intergenic
TCGGACTGTAGAGGAGTTAA+AGG 0.299488 7.2:-6210142 MS.gene07084:CDS
TTTGACTTCACCTTAATGAT+AGG 0.315672 7.2:+6209865 None:intergenic
TTGCCAGGGCTGCATCTTCC+GGG 0.316334 7.2:-6209903 MS.gene07084:CDS
AGGCGAAAGGGTTGGCAAAA+AGG 0.324610 7.2:-6206520 MS.gene07084:CDS
TGCAACACATCCTATCATTA+AGG 0.347399 7.2:-6209875 MS.gene07084:intron
ATGGACGCGAAGGATATTCT+TGG 0.347443 7.2:-6211476 MS.gene07084:CDS
ATCATCTTTACGAGCAGAAT+TGG 0.368961 7.2:+6210990 None:intergenic
CACAAGAAATGGAGCGAAAA+CGG 0.373448 7.2:-6209687 MS.gene07084:CDS
ATATAATGTTTCACAAGAAA+TGG 0.380297 7.2:-6209698 MS.gene07084:CDS
TTTAGCTACCTTGTTGTACT+TGG 0.384441 7.2:+6210819 None:intergenic
TCCCTGTCATGTAGTGTTGC+GGG 0.387723 7.2:-6209935 MS.gene07084:intron
CGAGTTACGGATGGCTTCTA+AGG 0.391035 7.2:-6209481 MS.gene07084:intron
AATTGAGAAGCATCAATTGA+TGG 0.396902 7.2:+6211222 None:intergenic
ACCTCCAAAATTCAACGAAT+CGG 0.405812 7.2:+6206643 None:intergenic
CTTGTTGTCTTGTTTGGGAG+AGG 0.408483 7.2:+6209650 None:intergenic
TTTCCGACCTTTGGTGTGCC+TGG 0.419064 7.2:+6206777 None:intergenic
TTCAGCTTCGTGTATATTTG+AGG 0.419331 7.2:-6207502 MS.gene07084:intron
TCCTCTACAGTCCGAGATGA+TGG 0.419890 7.2:+6210150 None:intergenic
AGCAAACATTGCAAGATCTC+GGG 0.423802 7.2:-6207409 MS.gene07084:CDS
TGCGGGCTATATTACTTGCC+AGG 0.427836 7.2:-6209918 MS.gene07084:CDS
ATGATCTTCATCTTTACCAT+TGG 0.430773 7.2:-6210972 MS.gene07084:CDS
TGATCTTCATCTTTACCATT+GGG 0.431644 7.2:-6210971 MS.gene07084:intron
ACAAGAAATGGAGCGAAAAC+GGG 0.436669 7.2:-6209686 MS.gene07084:CDS
GGTTACTGAACAGTCTCAAT+TGG 0.436817 7.2:-6208087 MS.gene07084:CDS
GTCAATGGTGTTCTACCTAC+TGG 0.449074 7.2:-6210856 MS.gene07084:CDS
ATGGCTGAATCTCCAGAAAC+AGG 0.450187 7.2:-6207081 MS.gene07084:intron
GCAGAAGGCACAACCATTTG+TGG 0.456839 7.2:+6207984 None:intergenic
TAATTCATTTGTCTCCTCCT+TGG 0.460992 7.2:+6210227 None:intergenic
AACTGTTGTTTCAGGCGAAA+GGG 0.463388 7.2:-6206532 MS.gene07084:intron
CCTCCAAAATTCAACGAATC+GGG 0.465713 7.2:+6206644 None:intergenic
CAAGCTTCAAACTCAACTGC+TGG 0.466195 7.2:-6207455 MS.gene07084:CDS
CTGGAGTTCGGACTATCAAA+CGG 0.471345 7.2:-6207436 MS.gene07084:CDS
GACATATGCACTCGAGCAAA+TGG 0.476593 7.2:-6207480 MS.gene07084:CDS
GAATGTGCAACTTCCACAAA+TGG 0.479963 7.2:-6207997 MS.gene07084:CDS
GAGCAAACATTGCAAGATCT+CGG 0.481522 7.2:-6207410 MS.gene07084:CDS
GCATCAATTGATGGCATAAG+AGG 0.485257 7.2:+6211231 None:intergenic
TAAAAGACCTAGAAAACAAA+AGG 0.485836 7.2:-6206334 MS.gene07084:CDS
GCGAAAACGGGCACTGTCCA+TGG 0.488734 7.2:-6209674 MS.gene07084:CDS
TTTCAGGTTCGAGTAGTCAA+TGG 0.491064 7.2:-6210871 MS.gene07084:intron
ACCTAGAAAACAAAAGGCCT+CGG 0.494235 7.2:-6206328 MS.gene07084:CDS
TACTCTAGCTTCTCTTCGCA+TGG 0.494649 7.2:-6207949 MS.gene07084:intron
GTCCCCGGAAGATGCAGCCC+TGG 0.501841 7.2:+6209900 None:intergenic
AAACTGTTGTTTCAGGCGAA+AGG 0.502998 7.2:-6206533 MS.gene07084:intron
ACAAGAGAAAAGAGATGAAG+AGG 0.510309 7.2:-6209632 MS.gene07084:intron
CAAACTCAACTGCTGGAGTT+CGG 0.511526 7.2:-6207448 MS.gene07084:CDS
ATCACGGAAAGATGAACCTT+CGG 0.512389 7.2:+6206818 None:intergenic
ACCTCGCGTGAAATGCCATC+AGG 0.515608 7.2:+6211380 None:intergenic
GTCCCTGTCATGTAGTGTTG+CGG 0.515697 7.2:-6209936 MS.gene07084:intron
ACTTTATTTGTATAGGGGCA+TGG 0.516874 7.2:-6206378 MS.gene07084:intron
AAAGCCTCCTACTCACGAAA+AGG 0.530448 7.2:-6211193 MS.gene07084:intron
TGGAGTTCGGACTATCAAAC+GGG 0.542516 7.2:-6207435 MS.gene07084:CDS
TCTTTCCGTGATGGATCCTA+CGG 0.547451 7.2:-6206807 MS.gene07084:CDS
TTAAAGGATCGATATTATAG+TGG 0.547811 7.2:-6210126 MS.gene07084:intron
GAAGGTTCATCTTTCCGTGA+TGG 0.548182 7.2:-6206816 MS.gene07084:CDS
CTTAGAAGCCATCCGTAACT+CGG 0.558886 7.2:+6209482 None:intergenic
GTTGCAGAGAGGGCTGTCCC+TGG 0.559311 7.2:-6208038 MS.gene07084:CDS
TGTGGAAGTTGCACATTCGA+AGG 0.559456 7.2:+6208002 None:intergenic
TATCAGCTATAACAACAAAA+CGG 0.560637 7.2:+6210178 None:intergenic
GTTGTTTCAGGCGAAAGGGT+TGG 0.562497 7.2:-6206528 MS.gene07084:intron
TTTCTCTGAGATTCTTTGGG+AGG 0.563303 7.2:+6211404 None:intergenic
TAGGTTTATGCACTTACTGG+TGG 0.564499 7.2:-6211261 MS.gene07084:CDS
TGCCAGGGCTGCATCTTCCG+GGG 0.572929 7.2:-6209902 MS.gene07084:CDS
GTAGAAGCATTATCTGCAGA+AGG 0.577553 7.2:+6207969 None:intergenic
TCCAGGTAAATTTGAAACCG+AGG 0.579026 7.2:-6207160 MS.gene07084:intron
CCAGGTAAATTTGAAACCGA+GGG 0.579215 7.2:-6207159 MS.gene07084:intron
CTGATAGGTTCCCATCATCT+CGG 0.582805 7.2:-6210161 MS.gene07084:CDS
TCTTGTTTGGGAGAGGACCA+TGG 0.585148 7.2:+6209657 None:intergenic
TTACGAGCAGAATTGGTGAA+AGG 0.585208 7.2:+6210997 None:intergenic
ACCTGATGGCATTTCACGCG+AGG 0.587818 7.2:-6211381 MS.gene07084:intron
GCGGGCTATATTACTTGCCA+GGG 0.590495 7.2:-6209917 MS.gene07084:CDS
CCTCTACAGTCCGAGATGAT+GGG 0.592270 7.2:+6210151 None:intergenic
TGTGCCTGGTGTTTCACCGT+AGG 0.598536 7.2:+6206791 None:intergenic
GGATCCTACGGTGAAACACC+AGG 0.600080 7.2:-6206795 MS.gene07084:CDS
GTGGCAGGTGCAATATAAAG+AGG 0.604781 7.2:-6206841 MS.gene07084:intron
GAAACCCTAAATGGACGCGA+AGG 0.605606 7.2:-6211486 None:intergenic
CCCATCATCTCGGACTGTAG+AGG 0.606561 7.2:-6210151 MS.gene07084:CDS
TGATGCAGAAGTTGCAGAGA+GGG 0.607610 7.2:-6208048 MS.gene07084:CDS
GAAGGAGATACAGTTTCACC+AGG 0.611694 7.2:+6208020 None:intergenic
AAGAATAGCCGAGTTACGGA+TGG 0.620429 7.2:-6209490 MS.gene07084:CDS
GCAAAAGAATAGTCTCCAGT+AGG 0.625902 7.2:+6210841 None:intergenic
TCAATTGATGGCATAAGAGG+TGG 0.628674 7.2:+6211234 None:intergenic
AATTATTTGATTTGTGTGAG+AGG 0.630139 7.2:-6210209 MS.gene07084:CDS
GAATCTCAGAGAAAACCTGA+TGG 0.650054 7.2:-6211395 MS.gene07084:CDS
GCAAACATTGCAAGATCTCG+GGG 0.655130 7.2:-6207408 MS.gene07084:intron
AGGATGTGTTGCAATGTCCC+CGG 0.656289 7.2:+6209885 None:intergenic
TGAAACACCAGGCACACCAA+AGG 0.660161 7.2:-6206784 MS.gene07084:intron
CCGGAGGAATTAAAGATCCG+AGG 0.665879 7.2:+6206311 None:intergenic
GTGCAATATAAAGAGGCCGA+AGG 0.666909 7.2:-6206834 MS.gene07084:CDS
ATCTACCTAGATGTGGACCA+AGG 0.676327 7.2:-6210244 MS.gene07084:intron
CATCATCAAATACACAGACG+AGG 0.685360 7.2:-6210704 MS.gene07084:CDS
TAAGAAGAGAAATACTAACA+TGG 0.691447 7.2:-6207100 MS.gene07084:CDS
CTGATGCAGAAGTTGCAGAG+AGG 0.692246 7.2:-6208049 MS.gene07084:CDS
TTTCACCGTAGGATCCATCA+CGG 0.706383 7.2:+6206802 None:intergenic
AAGGAGATACAGTTTCACCA+GGG 0.739390 7.2:+6208021 None:intergenic
TACCTAGATGTGGACCAAGG+AGG 0.740553 7.2:-6210241 MS.gene07084:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAACATATTAAATTCA+AGG - chr7.2:6208584-6208603 MS.gene07084:intron 10.0%
!! ACCTAAAAAATTATAATTTA+TGG + chr7.2:6208629-6208648 None:intergenic 10.0%
!! ATTGATATATTTATTTGTAT+TGG + chr7.2:6209012-6209031 None:intergenic 10.0%
!! CCTAAAAAATTATAATTTAT+GGG + chr7.2:6208628-6208647 None:intergenic 10.0%
!! TAAAAAAATTTCTTTATAGT+TGG + chr7.2:6208562-6208581 None:intergenic 10.0%
!! TAATTAAATCAAAGAAATTT+GGG + chr7.2:6210920-6210939 None:intergenic 10.0%
!!! AAAATTGGATAATTTTTTTA+AGG + chr7.2:6208657-6208676 None:intergenic 10.0%
!!! AAATAATTTTTTTTAATGAG+GGG - chr7.2:6210211-6210230 MS.gene07084:CDS 10.0%
!!! ATTAATTTTACATTTACTTT+TGG - chr7.2:6211356-6211375 MS.gene07084:intron 10.0%
!!! CAAATAATTTTTTTTAATGA+GGG - chr7.2:6210210-6210229 MS.gene07084:CDS 10.0%
!!! TAAAATTTTACAAAAAAAAG+TGG - chr7.2:6208690-6208709 MS.gene07084:intron 10.0%
!!! TCAAATAATTTTTTTTAATG+AGG - chr7.2:6210209-6210228 MS.gene07084:CDS 10.0%
!!! TCATGAATAATATTTTTTTT+GGG - chr7.2:6209146-6209165 MS.gene07084:intron 10.0%
!!! TTCATGAATAATATTTTTTT+TGG - chr7.2:6209145-6209164 MS.gene07084:intron 10.0%
!! AAAAAATATTATTCATGAAG+TGG + chr7.2:6209144-6209163 None:intergenic 15.0%
!! AATAAGATATTAAATGACTA+AGG + chr7.2:6209438-6209457 None:intergenic 15.0%
!! AATTAAATCAAAGAAATTTG+GGG + chr7.2:6210919-6210938 None:intergenic 15.0%
!! ACATAAAATAAATTTCAGTT+CGG + chr7.2:6207231-6207250 None:intergenic 15.0%
!! ACTAAAATTAACAAAATCTT+AGG - chr7.2:6208751-6208770 MS.gene07084:intron 15.0%
!! ATAATCATAGACAAATTAAA+TGG + chr7.2:6208922-6208941 None:intergenic 15.0%
!! ATATATGATATATTGTACAA+TGG + chr7.2:6207392-6207411 None:intergenic 15.0%
!! ATGTAAAATTAATCAATTGA+CGG + chr7.2:6211349-6211368 None:intergenic 15.0%
!! GTAATAGTACATTATTAAAA+TGG + chr7.2:6211383-6211402 None:intergenic 15.0%
!! GTAATTAAATCAAAGAAATT+TGG + chr7.2:6210921-6210940 None:intergenic 15.0%
!! TAATCTCTAACAAAAAATTA+AGG - chr7.2:6208728-6208747 MS.gene07084:intron 15.0%
!! TAATTAGACAAAAAAAATTG+TGG + chr7.2:6211321-6211340 None:intergenic 15.0%
!! TATATGATATATTGTACAAT+GGG + chr7.2:6207391-6207410 None:intergenic 15.0%
!! TATGTTTAATGATAAATAGA+TGG + chr7.2:6211237-6211256 None:intergenic 15.0%
!! TCTAAATTTCTATAAAGTAA+GGG - chr7.2:6211206-6211225 MS.gene07084:CDS 15.0%
!! TTCTAAATTTCTATAAAGTA+AGG - chr7.2:6211205-6211224 MS.gene07084:CDS 15.0%
!!! AATTGAGTTGTATTATTTTT+AGG - chr7.2:6206516-6206535 MS.gene07084:CDS 15.0%
!!! ATAATTTTTATTGTTGAAAG+AGG - chr7.2:6208949-6208968 MS.gene07084:intron 15.0%
!!! ATTGATTTTATACATTTTTC+AGG - chr7.2:6209688-6209707 MS.gene07084:CDS 15.0%
!!! CATGAATAATATTTTTTTTG+GGG - chr7.2:6209147-6209166 MS.gene07084:intron 15.0%
!!! CCCATAAATTATAATTTTTT+AGG - chr7.2:6208625-6208644 MS.gene07084:intron 15.0%
!!! CTTTTCAAATGTAAATAAAT+AGG - chr7.2:6208874-6208893 MS.gene07084:intron 15.0%
!!! GTATTATTTTTTTTCTTTGA+AGG + chr7.2:6208196-6208215 None:intergenic 15.0%
!!! TTTTAATAATGTACTATTAC+TGG - chr7.2:6211383-6211402 MS.gene07084:CDS 15.0%
!!! TTTTGCAACTAAATTTATTT+GGG - chr7.2:6209069-6209088 MS.gene07084:intron 15.0%
!!! TTTTTGCAACTAAATTTATT+TGG - chr7.2:6209068-6209087 MS.gene07084:intron 15.0%
!! AATTTGATATTTCGCTATTT+AGG + chr7.2:6209937-6209956 None:intergenic 20.0%
!! AGACAATTATTGATGAAATT+GGG + chr7.2:6208831-6208850 None:intergenic 20.0%
!! AGCTCAATGTTTATTATTTA+GGG - chr7.2:6209094-6209113 MS.gene07084:intron 20.0%
!! ATATAATGTTTCACAAGAAA+TGG - chr7.2:6208098-6208117 MS.gene07084:intron 20.0%
!! ATATGATATATTGTACAATG+GGG + chr7.2:6207390-6207409 None:intergenic 20.0%
!! ATTAAATCAAAGAAATTTGG+GGG + chr7.2:6210918-6210937 None:intergenic 20.0%
!! ATTAAGAAAGATGGTTAATT+TGG + chr7.2:6210499-6210518 None:intergenic 20.0%
!! ATTTCTTGTGAAACATTATA+TGG + chr7.2:6208099-6208118 None:intergenic 20.0%
!! ATTTGATATTTCGCTATTTA+GGG + chr7.2:6209936-6209955 None:intergenic 20.0%
!! GCAATCAATTTATATATCAA+TGG - chr7.2:6207327-6207346 MS.gene07084:intron 20.0%
!! TAAAAAACTGAGACAAAAAT+TGG + chr7.2:6208672-6208691 None:intergenic 20.0%
!! TAAAAAGTGACAGTTAAATA+GGG - chr7.2:6209582-6209601 MS.gene07084:intron 20.0%
!! TAGCTCAATGTTTATTATTT+AGG - chr7.2:6209093-6209112 MS.gene07084:intron 20.0%
!! TATTAAGATGATTATCCAAA+CGG - chr7.2:6206740-6206759 MS.gene07084:intron 20.0%
!! TGTAAAATTAATCAATTGAC+GGG + chr7.2:6211348-6211367 None:intergenic 20.0%
!! TTAAAAAGTGACACTTAAAA+AGG + chr7.2:6209341-6209360 None:intergenic 20.0%
!! TTAAAAAGTGACAGTTAAAT+AGG - chr7.2:6209581-6209600 MS.gene07084:intron 20.0%
!! TTTATAGAAATTTAGAAAGC+AGG + chr7.2:6211202-6211221 None:intergenic 20.0%
!! TTTGCAACTAAATTTATTTG+GGG - chr7.2:6209070-6209089 MS.gene07084:intron 20.0%
!!! CTTATATTGTTTTATTTTGC+AGG - chr7.2:6208267-6208286 MS.gene07084:intron 20.0%
!!! TACAGTTTTTTGGAAATTTA+TGG - chr7.2:6207162-6207181 MS.gene07084:intron 20.0%
!!! TTTTTATTATCAAGAGAAGA+TGG + chr7.2:6206365-6206384 None:intergenic 20.0%
! AAGTTTAGACATGAAAAATG+AGG - chr7.2:6207296-6207315 MS.gene07084:intron 25.0%
! AATAATGTACTATTACTGGT+TGG - chr7.2:6211387-6211406 MS.gene07084:CDS 25.0%
! AATATTATTCATGAAGTGGT+CGG + chr7.2:6209140-6209159 None:intergenic 25.0%
! AATTTATATATCAATGGACC+TGG - chr7.2:6207333-6207352 MS.gene07084:intron 25.0%
! AGAAATCAGAATTAGATCAT+AGG + chr7.2:6208413-6208432 None:intergenic 25.0%
! AGATTCTACTATCTAATTCA+TGG + chr7.2:6210524-6210543 None:intergenic 25.0%
! AGTTTAGACATGAAAAATGA+GGG - chr7.2:6207297-6207316 MS.gene07084:intron 25.0%
! ATATTAATGCATTGAACACT+TGG + chr7.2:6207517-6207536 None:intergenic 25.0%
! ATCCATCACTTTGAATATTA+GGG - chr7.2:6208458-6208477 MS.gene07084:intron 25.0%
! ATGTATAAAATCAATATCCC+AGG + chr7.2:6209683-6209702 None:intergenic 25.0%
! ATTAAGATGATTATCCAAAC+GGG - chr7.2:6206741-6206760 MS.gene07084:intron 25.0%
! CAGACAATTATTGATGAAAT+TGG + chr7.2:6208832-6208851 None:intergenic 25.0%
! CCAAAAATATAGCAATGAAT+AGG + chr7.2:6207030-6207049 None:intergenic 25.0%
! CTCGTTACAAAAATTTCATT+TGG + chr7.2:6210573-6210592 None:intergenic 25.0%
! CTTATGAAAATAAGCTGAAA+AGG + chr7.2:6206700-6206719 None:intergenic 25.0%
! GATAACAACTCCTAAATTAA+TGG + chr7.2:6208371-6208390 None:intergenic 25.0%
! GATAGTAGAATCTTATATTG+AGG - chr7.2:6210531-6210550 MS.gene07084:intron 25.0%
! GATTCTACTATCTAATTCAT+GGG + chr7.2:6210523-6210542 None:intergenic 25.0%
! TAAAAGACCTAGAAAACAAA+AGG - chr7.2:6211462-6211481 MS.gene07084:CDS 25.0%
! TAAACAATCATACATTAGAC+AGG + chr7.2:6210855-6210874 None:intergenic 25.0%
! TAAATAACTAAGGGTAATGT+TGG - chr7.2:6209480-6209499 MS.gene07084:intron 25.0%
! TAAGAAGAGAAATACTAACA+TGG - chr7.2:6210696-6210715 MS.gene07084:CDS 25.0%
! TACAATTTCAGAACACAAAA+TGG + chr7.2:6209893-6209912 None:intergenic 25.0%
! TACCAATACACCATTAATTT+AGG - chr7.2:6208358-6208377 MS.gene07084:intron 25.0%
! TATCAGCTATAACAACAAAA+CGG + chr7.2:6207621-6207640 None:intergenic 25.0%
! TATCCATCACTTTGAATATT+AGG - chr7.2:6208457-6208476 MS.gene07084:intron 25.0%
! TCTCCACAATAAATAACTAA+GGG - chr7.2:6209471-6209490 MS.gene07084:intron 25.0%
! TTAAAGGATCGATATTATAG+TGG - chr7.2:6207670-6207689 MS.gene07084:intron 25.0%
! TTAAATCAAAGAAATTTGGG+GGG + chr7.2:6210917-6210936 None:intergenic 25.0%
! TTAACAAATGCAGTTAAAAC+AGG + chr7.2:6207421-6207440 None:intergenic 25.0%
! TTACCCTTAGTTATTTATTG+TGG + chr7.2:6209477-6209496 None:intergenic 25.0%
! TTTGAAAGTGACAGTTAAAT+AGG - chr7.2:6209531-6209550 MS.gene07084:intron 25.0%
!! CCTATTCATTGCTATATTTT+TGG - chr7.2:6207027-6207046 MS.gene07084:intron 25.0%
!!! AATTATTTGATTTGTGTGAG+AGG - chr7.2:6207587-6207606 MS.gene07084:intron 25.0%
!!! AATTTTGAAGATCAGAATTC+TGG + chr7.2:6210164-6210183 None:intergenic 25.0%
!!! ATTATGTTTTTCAGGTTACT+TGG - chr7.2:6206767-6206786 MS.gene07084:intron 25.0%
!!! TAATATTCAAAGTGATGGAT+AGG + chr7.2:6208458-6208477 None:intergenic 25.0%
!!! TATTTAACTGTCACTTTCAA+AGG + chr7.2:6209532-6209551 None:intergenic 25.0%
!!! TCACTTGTTAGAATTTTCAT+GGG - chr7.2:6210818-6210837 MS.gene07084:intron 25.0%
!!! TGTCTAATTGTACAGTTTTT+TGG - chr7.2:6207152-6207171 MS.gene07084:CDS 25.0%
!!! TTCACTTGTTAGAATTTTCA+TGG - chr7.2:6210817-6210836 MS.gene07084:intron 25.0%
!!! TTGTATTGGTTTGATACTTT+CGG + chr7.2:6208998-6209017 None:intergenic 25.0%
AAAAACATAATAACCCCGTT+TGG + chr7.2:6206758-6206777 None:intergenic 30.0%
AAATATGAATTTCCGACCTT+TGG + chr7.2:6211031-6211050 None:intergenic 30.0%
AAGTGACACTTAAAAAGGAA+CGG + chr7.2:6209336-6209355 None:intergenic 30.0%
AATAAGCTGAAAAGGACTTA+TGG + chr7.2:6206692-6206711 None:intergenic 30.0%
ACCTTTCAATTCTGATGATA+TGG - chr7.2:6207786-6207805 MS.gene07084:intron 30.0%
ATAGGGAGTAATTACCAATT+TGG - chr7.2:6209599-6209618 MS.gene07084:intron 30.0%
ATGATCTTCATCTTTACCAT+TGG - chr7.2:6206824-6206843 MS.gene07084:CDS 30.0%
CATAAAAAGTTAAGGTAGTC+GGG + chr7.2:6210419-6210438 None:intergenic 30.0%
CATTCATGTTTATAACCAGA+TGG - chr7.2:6210790-6210809 MS.gene07084:intron 30.0%
CTCCTAAATTAATGGTGTAT+TGG + chr7.2:6208363-6208382 None:intergenic 30.0%
CTCTCCACAATAAATAACTA+AGG - chr7.2:6209470-6209489 MS.gene07084:intron 30.0%
CTTACAATAGAAGTCAATGA+AGG + chr7.2:6207279-6207298 None:intergenic 30.0%
GAGTTAAATGACATGAATTG+TGG + chr7.2:6207731-6207750 None:intergenic 30.0%
GCATAAAAAGTTAAGGTAGT+CGG + chr7.2:6210420-6210439 None:intergenic 30.0%
GTAACAATTATTGAGTGTCT+TGG + chr7.2:6209377-6209396 None:intergenic 30.0%
GTTTAGACATGAAAAATGAG+GGG - chr7.2:6207298-6207317 MS.gene07084:intron 30.0%
TAGGGAGTAATTACCAATTT+GGG - chr7.2:6209600-6209619 MS.gene07084:intron 30.0%
TAGGTAGATAAAGCAGAATA+AGG + chr7.2:6207541-6207560 None:intergenic 30.0%
TATACCAATATACCTGTTTC+TGG + chr7.2:6210730-6210749 None:intergenic 30.0%
TCCATATCATCAGAATTGAA+AGG + chr7.2:6207790-6207809 None:intergenic 30.0%
TGATCTTCATCTTTACCATT+GGG - chr7.2:6206825-6206844 MS.gene07084:CDS 30.0%
TTAAGATGATTATCCAAACG+GGG - chr7.2:6206742-6206761 MS.gene07084:intron 30.0%
TTCATGGGTATTAAGAAAGA+TGG + chr7.2:6210508-6210527 None:intergenic 30.0%
TTCCCTAATATTCAAAGTGA+TGG + chr7.2:6208463-6208482 None:intergenic 30.0%
TTGAGTTTGACCATATGTTT+GGG - chr7.2:6210593-6210612 MS.gene07084:intron 30.0%
! AGTTTCCCTTCTATTGTTTT+AGG - chr7.2:6211066-6211085 MS.gene07084:intron 30.0%
! ATGTATCAAGTTGTGATTGT+GGG - chr7.2:6207252-6207271 MS.gene07084:intron 30.0%
! TATGTATCAAGTTGTGATTG+TGG - chr7.2:6207251-6207270 MS.gene07084:intron 30.0%
! TCGGGAACTTTATTTGTATA+GGG - chr7.2:6211412-6211431 MS.gene07084:CDS 30.0%
! TGTTTATTATTTAGGGTAGC+CGG - chr7.2:6209101-6209120 MS.gene07084:intron 30.0%
! TTTGACTTCACCTTAATGAT+AGG + chr7.2:6207934-6207953 None:intergenic 30.0%
!! AATTGAGAAGCATCAATTGA+TGG + chr7.2:6206577-6206596 None:intergenic 30.0%
!! ATGCATAAAACTGTTGTTTC+AGG - chr7.2:6211256-6211275 MS.gene07084:CDS 30.0%
!! ATTACTTGTTGTGAAATACG+TGG - chr7.2:6210936-6210955 MS.gene07084:intron 30.0%
!! TTTCTCTTGTTGTCTTGTTT+GGG + chr7.2:6208154-6208173 None:intergenic 30.0%
!! TTTTCTCTTGTTGTCTTGTT+TGG + chr7.2:6208155-6208174 None:intergenic 30.0%
!!! CACTTTTTAAGTGTCACTTT+TGG + chr7.2:6209571-6209590 None:intergenic 30.0%
!!! GTTTTGTTGTTATAGCTGAT+AGG - chr7.2:6207620-6207639 MS.gene07084:intron 30.0%
!!! TTTTAGGTTTATGCACTTAC+TGG - chr7.2:6206532-6206551 MS.gene07084:intron 30.0%
AAATCGCTATTTAGAAACGC+TGG - chr7.2:6208786-6208805 MS.gene07084:intron 35.0%
AACAGGTTACTATCAACACA+TGG + chr7.2:6208056-6208075 None:intergenic 35.0%
AAGTATTTGACAGATCCTGT+GGG - chr7.2:6207123-6207142 MS.gene07084:CDS 35.0%
AATCGCTATTTAGAAACGCT+GGG - chr7.2:6208787-6208806 MS.gene07084:intron 35.0%
AATTAGACATGATTACCCAC+AGG + chr7.2:6207141-6207160 None:intergenic 35.0%
ACAAGAGAAAAGAGATGAAG+AGG - chr7.2:6208164-6208183 MS.gene07084:intron 35.0%
ACCAGACGTCATTTATTATG+AGG + chr7.2:6208245-6208264 None:intergenic 35.0%
ACCTCCAAAATTCAACGAAT+CGG + chr7.2:6211156-6211175 None:intergenic 35.0%
ACGAGCCTAAAACAATAGAA+GGG + chr7.2:6211074-6211093 None:intergenic 35.0%
ACTTCATACATTTCTGCCAT+CGG - chr7.2:6208214-6208233 MS.gene07084:intron 35.0%
AGCTCGCAAAAAATTTATGC+AGG - chr7.2:6208534-6208553 MS.gene07084:intron 35.0%
AGGGAGTAATTACCAATTTG+GGG - chr7.2:6209601-6209620 MS.gene07084:intron 35.0%
ATCATCTTTACGAGCAGAAT+TGG + chr7.2:6206809-6206828 None:intergenic 35.0%
ATCATGTTAAGCAGAACACT+AGG - chr7.2:6210028-6210047 MS.gene07084:intron 35.0%
ATCTCCAGAAACAGGTATAT+TGG - chr7.2:6210723-6210742 MS.gene07084:intron 35.0%
ATGCATTGAACACTTGGTAA+AGG + chr7.2:6207511-6207530 None:intergenic 35.0%
ATTGTAAGTGTCTGGCAATT+TGG - chr7.2:6209907-6209926 MS.gene07084:CDS 35.0%
CAAAAAGAATAGCCGAGTTA+CGG - chr7.2:6208302-6208321 MS.gene07084:intron 35.0%
CCAGACGTCATTTATTATGA+GGG + chr7.2:6208244-6208263 None:intergenic 35.0%
CTACATTGAAAAGAGAGAAC+AGG + chr7.2:6208073-6208092 None:intergenic 35.0%
CTCGCAAAAAATTTATGCAG+GGG - chr7.2:6208536-6208555 MS.gene07084:intron 35.0%
GAATCAGCAACATTCTATAC+TGG - chr7.2:6210877-6210896 MS.gene07084:intron 35.0%
GACTGTCGTTAGACAATTTA+GGG + chr7.2:6209964-6209983 None:intergenic 35.0%
GCAAGCTGCATAAAAAGTTA+AGG + chr7.2:6210427-6210446 None:intergenic 35.0%
GCTCGCAAAAAATTTATGCA+GGG - chr7.2:6208535-6208554 MS.gene07084:intron 35.0%
GGAGTTGTTATCATGATTCA+AGG - chr7.2:6208379-6208398 MS.gene07084:intron 35.0%
GTTGAGTTTGACCATATGTT+TGG - chr7.2:6210592-6210611 MS.gene07084:intron 35.0%
TAACAAGTGAAATCACCATC+TGG + chr7.2:6210808-6210827 None:intergenic 35.0%
TAATTCATTTGTCTCCTCCT+TGG + chr7.2:6207572-6207591 None:intergenic 35.0%
TGACTGTCGTTAGACAATTT+AGG + chr7.2:6209965-6209984 None:intergenic 35.0%
TGCAACACATCCTATCATTA+AGG - chr7.2:6207921-6207940 MS.gene07084:intron 35.0%
TTACTATCAACACATGGCAA+TGG + chr7.2:6208050-6208069 None:intergenic 35.0%
TTATTATGAGGGTAAACCGA+TGG + chr7.2:6208233-6208252 None:intergenic 35.0%
TTCAGCTTCGTGTATATTTG+AGG - chr7.2:6210294-6210313 MS.gene07084:intron 35.0%
TTGTAAGTGTCTGGCAATTT+GGG - chr7.2:6209908-6209927 MS.gene07084:CDS 35.0%
! AAAACTTCGTTTTGTAGCAC+TGG - chr7.2:6210132-6210151 MS.gene07084:CDS 35.0%
! AAAGTATTTGACAGATCCTG+TGG - chr7.2:6207122-6207141 MS.gene07084:CDS 35.0%
! ACGGGGTTATTATGTTTTTC+AGG - chr7.2:6206759-6206778 MS.gene07084:intron 35.0%
! ACTTTATTTGTATAGGGGCA+TGG - chr7.2:6211418-6211437 MS.gene07084:CDS 35.0%
! ATTTGGGGCAACAAAATTTG+TGG - chr7.2:6209616-6209635 MS.gene07084:intron 35.0%
! CAAATTTTGTTGCCCCAAAT+TGG + chr7.2:6209616-6209635 None:intergenic 35.0%
! CGGGAACTTTATTTGTATAG+GGG - chr7.2:6211413-6211432 MS.gene07084:CDS 35.0%
! CTCGGGAACTTTATTTGTAT+AGG - chr7.2:6211411-6211430 MS.gene07084:CDS 35.0%
! CTGTTCTCTCTTTTCAATGT+AGG - chr7.2:6208071-6208090 MS.gene07084:CDS 35.0%
! TTCTTTTGCCAAGTACAACA+AGG - chr7.2:6206969-6206988 MS.gene07084:intron 35.0%
! TTTAGCTACCTTGTTGTACT+TGG + chr7.2:6206980-6206999 None:intergenic 35.0%
!! ATTCCCGATTCGTTGAATTT+TGG - chr7.2:6211149-6211168 MS.gene07084:intron 35.0%
!! GTTCTGAAATTGTAAGTGTC+TGG - chr7.2:6209899-6209918 MS.gene07084:CDS 35.0%
!!! AGGTTTTCTCTGAGATTCTT+TGG + chr7.2:6206399-6206418 None:intergenic 35.0%
!!! GGTTTTCTCTGAGATTCTTT+GGG + chr7.2:6206398-6206417 None:intergenic 35.0%
!!! TATTTTTTTTGGGGTAGCCA+AGG - chr7.2:6209156-6209175 MS.gene07084:intron 35.0%
!!! TTATGTGTCGCTTCTTTTTC+AGG - chr7.2:6206909-6206928 MS.gene07084:intron 35.0%
!!! TTTTTCAGGTTACTTGGCAA+TGG - chr7.2:6206773-6206792 MS.gene07084:intron 35.0%
AAGGAGATACAGTTTCACCA+GGG + chr7.2:6209778-6209797 None:intergenic 40.0%
AATGGACCTGGTTATTTGCA+AGG - chr7.2:6207345-6207364 MS.gene07084:intron 40.0%
ACAAGAAATGGAGCGAAAAC+GGG - chr7.2:6208110-6208129 MS.gene07084:intron 40.0%
ACCTAGAAAACAAAAGGCCT+CGG - chr7.2:6211468-6211487 MS.gene07084:CDS 40.0%
AGCAAACATTGCAAGATCTC+GGG - chr7.2:6210387-6210406 MS.gene07084:intron 40.0%
ATCACGGAAAGATGAACCTT+CGG + chr7.2:6210981-6211000 None:intergenic 40.0%
ATGATGCATTCTGTGATTCC+AGG - chr7.2:6210619-6210638 MS.gene07084:intron 40.0%
CAAAAAGGACCAAAAACGCA+AGG - chr7.2:6211291-6211310 MS.gene07084:intron 40.0%
CACAAGAAATGGAGCGAAAA+CGG - chr7.2:6208109-6208128 MS.gene07084:intron 40.0%
CACGAGCCTAAAACAATAGA+AGG + chr7.2:6211075-6211094 None:intergenic 40.0%
CATCATCAAATACACAGACG+AGG - chr7.2:6207092-6207111 MS.gene07084:CDS 40.0%
CCCTCATAATAAATGACGTC+TGG - chr7.2:6208241-6208260 MS.gene07084:intron 40.0%
CCTCCAAAATTCAACGAATC+GGG + chr7.2:6211155-6211174 None:intergenic 40.0%
CTACTGACACATTTGTTTCG+TGG - chr7.2:6211104-6211123 MS.gene07084:intron 40.0%
CTGCTTTATCTACCTAGATG+TGG - chr7.2:6207545-6207564 MS.gene07084:intron 40.0%
GAATCTCAGAGAAAACCTGA+TGG - chr7.2:6206401-6206420 MS.gene07084:intron 40.0%
GAATGTGCAACTTCCACAAA+TGG - chr7.2:6209799-6209818 MS.gene07084:intron 40.0%
GAGCAAACATTGCAAGATCT+CGG - chr7.2:6210386-6210405 MS.gene07084:intron 40.0%
GCAAAAGAATAGTCTCCAGT+AGG + chr7.2:6206958-6206977 None:intergenic 40.0%
GGTCGGTATGTATTTACATC+CGG + chr7.2:6209123-6209142 None:intergenic 40.0%
GGTTACTGAACAGTCTCAAT+TGG - chr7.2:6209709-6209728 MS.gene07084:intron 40.0%
TAGGTTTATGCACTTACTGG+TGG - chr7.2:6206535-6206554 MS.gene07084:intron 40.0%
TGACACATTTGTTTCGTGGT+GGG - chr7.2:6211108-6211127 MS.gene07084:intron 40.0%
TGACACTTAAAAAGGAACGG+AGG + chr7.2:6209333-6209352 None:intergenic 40.0%
TTACGAGCAGAATTGGTGAA+AGG + chr7.2:6206802-6206821 None:intergenic 40.0%
! ACTTTAGTTTACCTCCCATC+AGG + chr7.2:6209210-6209229 None:intergenic 40.0%
! CCAGGTAAATTTGAAACCGA+GGG - chr7.2:6210637-6210656 MS.gene07084:intron 40.0%
! CTTTAGTTTACCTCCCATCA+GGG + chr7.2:6209209-6209228 None:intergenic 40.0%
! GCATCAATTGATGGCATAAG+AGG + chr7.2:6206568-6206587 None:intergenic 40.0%
! GTTCAAACCTTTTCGTGAGT+AGG + chr7.2:6206613-6206632 None:intergenic 40.0%
! TCAATTGATGGCATAAGAGG+TGG + chr7.2:6206565-6206584 None:intergenic 40.0%
! TCCAGGTAAATTTGAAACCG+AGG - chr7.2:6210636-6210655 MS.gene07084:intron 40.0%
! TCTGCACAAACAGCTTTTGT+TGG + chr7.2:6210665-6210684 None:intergenic 40.0%
! TTTAGTTTACCTCCCATCAG+GGG + chr7.2:6209208-6209227 None:intergenic 40.0%
!! AAACTGTTGTTTCAGGCGAA+AGG - chr7.2:6211263-6211282 MS.gene07084:intron 40.0%
!! AACTGTTGTTTCAGGCGAAA+GGG - chr7.2:6211264-6211283 MS.gene07084:intron 40.0%
!! CAGGTGAGAGTCTGTTTTAA+CGG + chr7.2:6208020-6208039 None:intergenic 40.0%
!! GTACTATTACTGGTTGGTCT+CGG - chr7.2:6211393-6211412 MS.gene07084:CDS 40.0%
!! GTAGAAGCATTATCTGCAGA+AGG + chr7.2:6209830-6209849 None:intergenic 40.0%
!! TACTATTACTGGTTGGTCTC+GGG - chr7.2:6211394-6211413 MS.gene07084:CDS 40.0%
!! TTTCAGGTTCGAGTAGTCAA+TGG - chr7.2:6206925-6206944 MS.gene07084:intron 40.0%
!! TTTCTCTGAGATTCTTTGGG+AGG + chr7.2:6206395-6206414 None:intergenic 40.0%
!!! ATTGTTTTAGGCTCGTGGTT+TGG - chr7.2:6211078-6211097 MS.gene07084:intron 40.0%
!!! CTTCTATTGTTTTAGGCTCG+TGG - chr7.2:6211073-6211092 MS.gene07084:intron 40.0%
AAAGCCTCCTACTCACGAAA+AGG - chr7.2:6206603-6206622 MS.gene07084:intron 45.0%
AAGAATAGCCGAGTTACGGA+TGG - chr7.2:6208306-6208325 MS.gene07084:intron 45.0%
ACCCGAAGGAAATTTGTGCT+AGG - chr7.2:6210090-6210109 MS.gene07084:intron 45.0%
AGAGGTCCTTGCAAATAACC+AGG + chr7.2:6207354-6207373 None:intergenic 45.0%
ATCTACCTAGATGTGGACCA+AGG - chr7.2:6207552-6207571 MS.gene07084:intron 45.0%
ATCTGTACTTGCACATGCCT+GGG - chr7.2:6209663-6209682 MS.gene07084:CDS 45.0%
ATGGACGCGAAGGATATTCT+TGG - chr7.2:6206320-6206339 MS.gene07084:CDS 45.0%
ATGGCTGAATCTCCAGAAAC+AGG - chr7.2:6210715-6210734 MS.gene07084:CDS 45.0%
CAAACTCAACTGCTGGAGTT+CGG - chr7.2:6210348-6210367 MS.gene07084:intron 45.0%
CAAAGAAATTTGGGGGGTGA+GGG + chr7.2:6210911-6210930 None:intergenic 45.0%
CAACACATGGCAATGGCTTA+AGG + chr7.2:6208043-6208062 None:intergenic 45.0%
CAAGCTTCAAACTCAACTGC+TGG - chr7.2:6210341-6210360 MS.gene07084:intron 45.0%
CCCGAAGGAAATTTGTGCTA+GGG - chr7.2:6210091-6210110 MS.gene07084:intron 45.0%
CCCTAGCACAAATTTCCTTC+GGG + chr7.2:6210094-6210113 None:intergenic 45.0%
CCCTCGGTTTCAAATTTACC+TGG + chr7.2:6210640-6210659 None:intergenic 45.0%
CCTCTAACAGAGCTACTTGA+CGG + chr7.2:6209999-6210018 None:intergenic 45.0%
CTGACACATTTGTTTCGTGG+TGG - chr7.2:6211107-6211126 MS.gene07084:intron 45.0%
CTGATAGGTTCCCATCATCT+CGG - chr7.2:6207635-6207654 MS.gene07084:intron 45.0%
CTGGAGTTCGGACTATCAAA+CGG - chr7.2:6210360-6210379 MS.gene07084:intron 45.0%
CTTAGAAGCCATCCGTAACT+CGG + chr7.2:6208317-6208336 None:intergenic 45.0%
GAAAATGCGCACAGCATACT+AGG + chr7.2:6208491-6208510 None:intergenic 45.0%
GAAGGAGATACAGTTTCACC+AGG + chr7.2:6209779-6209798 None:intergenic 45.0%
GAAGGTTCATCTTTCCGTGA+TGG - chr7.2:6210980-6210999 MS.gene07084:CDS 45.0%
GACATATGCACTCGAGCAAA+TGG - chr7.2:6210316-6210335 MS.gene07084:intron 45.0%
GACGTTAGCACTTGTGAAGA+GGG - chr7.2:6206656-6206675 MS.gene07084:CDS 45.0%
GCAAACATTGCAAGATCTCG+GGG - chr7.2:6210388-6210407 MS.gene07084:intron 45.0%
GCATATTGTGACTGACCCAA+TGG + chr7.2:6206843-6206862 None:intergenic 45.0%
GCCCTAGCACAAATTTCCTT+CGG + chr7.2:6210095-6210114 None:intergenic 45.0%
GTCAATGGTGTTCTACCTAC+TGG - chr7.2:6206940-6206959 MS.gene07084:intron 45.0%
GTGCAATATAAAGAGGCCGA+AGG - chr7.2:6210962-6210981 MS.gene07084:intron 45.0%
GTGGCAGGTGCAATATAAAG+AGG - chr7.2:6210955-6210974 MS.gene07084:intron 45.0%
TCAAAGAAATTTGGGGGGTG+AGG + chr7.2:6210912-6210931 None:intergenic 45.0%
TCGGACTGTAGAGGAGTTAA+AGG - chr7.2:6207654-6207673 MS.gene07084:intron 45.0%
TGACGTTAGCACTTGTGAAG+AGG - chr7.2:6206655-6206674 MS.gene07084:CDS 45.0%
TGATGCAGAAGTTGCAGAGA+GGG - chr7.2:6209748-6209767 MS.gene07084:intron 45.0%
TGGAGTTCGGACTATCAAAC+GGG - chr7.2:6210361-6210380 MS.gene07084:intron 45.0%
TGTGGAAGTTGCACATTCGA+AGG + chr7.2:6209797-6209816 None:intergenic 45.0%
TTTCACCGTAGGATCCATCA+CGG + chr7.2:6210997-6211016 None:intergenic 45.0%
! ACAGCTTTTGTTGGAACCCT+CGG + chr7.2:6210656-6210675 None:intergenic 45.0%
! ATCACTAGTCTCTAACCCGA+AGG - chr7.2:6210076-6210095 MS.gene07084:intron 45.0%
! CAAACCTTTTCGTGAGTAGG+AGG + chr7.2:6206610-6206629 None:intergenic 45.0%
! CTTGTTGTGAAATACGTGGC+AGG - chr7.2:6210940-6210959 MS.gene07084:intron 45.0%
! CTTTTATGAGCTGCTGTAGG+TGG + chr7.2:6211448-6211467 None:intergenic 45.0%
! GGTCTTTTATGAGCTGCTGT+AGG + chr7.2:6211451-6211470 None:intergenic 45.0%
! GTGCGCATTTTCGTTTGCAT+GGG - chr7.2:6208499-6208518 MS.gene07084:intron 45.0%
! TACTCTAGCTTCTCTTCGCA+TGG - chr7.2:6209847-6209866 MS.gene07084:intron 45.0%
! TGTGCGCATTTTCGTTTGCA+TGG - chr7.2:6208498-6208517 MS.gene07084:intron 45.0%
! TGTGGTGTACCTTGCGTTTT+TGG + chr7.2:6211303-6211322 None:intergenic 45.0%
! TTTGTTTCGTGGTGGGAATC+AGG - chr7.2:6211115-6211134 MS.gene07084:intron 45.0%
!! CCCGATTCGTTGAATTTTGG+AGG - chr7.2:6211152-6211171 MS.gene07084:intron 45.0%
!! CTTGTTGTCTTGTTTGGGAG+AGG + chr7.2:6208149-6208168 None:intergenic 45.0%
!! TCTTTCCGTGATGGATCCTA+CGG - chr7.2:6210989-6211008 MS.gene07084:CDS 45.0%
!!! TCCGAGGCCTTTTGTTTTCT+AGG + chr7.2:6211472-6211491 None:intergenic 45.0%
ACATGGCAATGGCTTAAGGC+AGG + chr7.2:6208039-6208058 None:intergenic 50.0%
AGGATGTGTTGCAATGTCCC+CGG + chr7.2:6207914-6207933 None:intergenic 50.0%
CCTCTACAGTCCGAGATGAT+GGG + chr7.2:6207648-6207667 None:intergenic 50.0%
CGAGTTACGGATGGCTTCTA+AGG - chr7.2:6208315-6208334 MS.gene07084:intron 50.0%
CTAACAGAGCTACTTGACGG+AGG + chr7.2:6209996-6210015 None:intergenic 50.0%
CTGATGCAGAAGTTGCAGAG+AGG - chr7.2:6209747-6209766 MS.gene07084:intron 50.0%
GATCTGTACTTGCACATGCC+TGG - chr7.2:6209662-6209681 MS.gene07084:CDS 50.0%
GTCCCTGTCATGTAGTGTTG+CGG - chr7.2:6207860-6207879 MS.gene07084:intron 50.0%
TACCTAGATGTGGACCAAGG+AGG - chr7.2:6207555-6207574 MS.gene07084:intron 50.0%
TCCCTGTCATGTAGTGTTGC+GGG - chr7.2:6207861-6207880 MS.gene07084:intron 50.0%
TCCTCTACAGTCCGAGATGA+TGG + chr7.2:6207649-6207668 None:intergenic 50.0%
TGAAACACCAGGCACACCAA+AGG - chr7.2:6211012-6211031 MS.gene07084:CDS 50.0%
TGGGGTGCAGTGTACAAAAG+AGG + chr7.2:6207372-6207391 None:intergenic 50.0%
! AGGCGAAAGGGTTGGCAAAA+AGG - chr7.2:6211276-6211295 MS.gene07084:intron 50.0%
! AGTAGCTCTGTTAGAGGTGC+TGG - chr7.2:6210002-6210021 MS.gene07084:intron 50.0%
! CCGTCAAGTAGCTCTGTTAG+AGG - chr7.2:6209996-6210015 MS.gene07084:intron 50.0%
! CGCATTTTCGTTTGCATGGG+AGG - chr7.2:6208502-6208521 MS.gene07084:intron 50.0%
! GCAGAAGGCACAACCATTTG+TGG + chr7.2:6209815-6209834 None:intergenic 50.0%
! GCGGGCTATATTACTTGCCA+GGG - chr7.2:6207879-6207898 MS.gene07084:intron 50.0%
! GTTGTTTCAGGCGAAAGGGT+TGG - chr7.2:6211268-6211287 MS.gene07084:intron 50.0%
! TCTTGTTTGGGAGAGGACCA+TGG + chr7.2:6208142-6208161 None:intergenic 50.0%
! TGCGGGCTATATTACTTGCC+AGG - chr7.2:6207878-6207897 MS.gene07084:intron 50.0%
ACACCAGGCACACCAAAGGT+CGG - chr7.2:6211016-6211035 MS.gene07084:CDS 55.0%
ACCTCGCGTGAAATGCCATC+AGG + chr7.2:6206419-6206438 None:intergenic 55.0%
ACCTGATGGCATTTCACGCG+AGG - chr7.2:6206415-6206434 MS.gene07084:intron 55.0%
AGCCCGCAACACTACATGAC+AGG + chr7.2:6207866-6207885 None:intergenic 55.0%
AGGCTACCCCTCCCATATGA+AGG - chr7.2:6209176-6209195 MS.gene07084:intron 55.0%
CCCATCATCTCGGACTGTAG+AGG - chr7.2:6207645-6207664 MS.gene07084:intron 55.0%
CGTAGCCCTTCATATGGGAG+GGG + chr7.2:6209185-6209204 None:intergenic 55.0%
CTCCTCCTTGGTCCACATCT+AGG + chr7.2:6207560-6207579 None:intergenic 55.0%
GCCCGCAACACTACATGACA+GGG + chr7.2:6207865-6207884 None:intergenic 55.0%
GCGTAGCCCTTCATATGGGA+GGG + chr7.2:6209186-6209205 None:intergenic 55.0%
GGATCCTACGGTGAAACACC+AGG - chr7.2:6211001-6211020 MS.gene07084:CDS 55.0%
GGCTACCCCTCCCATATGAA+GGG - chr7.2:6209177-6209196 MS.gene07084:intron 55.0%
TCATATGGGAGGGGTAGCCT+TGG + chr7.2:6209176-6209195 None:intergenic 55.0%
TGTGCCTGGTGTTTCACCGT+AGG + chr7.2:6211008-6211027 None:intergenic 55.0%
TTCGTTTGCATGGGAGGCAG+CGG - chr7.2:6208508-6208527 MS.gene07084:intron 55.0%
! AGGGGCGTAGCCCTTCATAT+GGG + chr7.2:6209190-6209209 None:intergenic 55.0%
! TTTCCGACCTTTGGTGTGCC+TGG + chr7.2:6211022-6211041 None:intergenic 55.0%
ATGAAGGGCTACGCCCCTGA+TGG - chr7.2:6209192-6209211 MS.gene07084:intron 60.0%
CTTGCCAGGGCTGCATCTTC+CGG - chr7.2:6207892-6207911 MS.gene07084:intron 60.0%
GGCGTAGCCCTTCATATGGG+AGG + chr7.2:6209187-6209206 None:intergenic 60.0%
TGAAGGGCTACGCCCCTGAT+GGG - chr7.2:6209193-6209212 MS.gene07084:intron 60.0%
TTGCCAGGGCTGCATCTTCC+GGG - chr7.2:6207893-6207912 MS.gene07084:intron 60.0%
! CAGGGGCGTAGCCCTTCATA+TGG + chr7.2:6209191-6209210 None:intergenic 60.0%
! GCGAAAACGGGCACTGTCCA+TGG - chr7.2:6208122-6208141 MS.gene07084:intron 60.0%
GTTGCAGAGAGGGCTGTCCC+TGG - chr7.2:6209758-6209777 MS.gene07084:intron 65.0%
TGCCAGGGCTGCATCTTCCG+GGG - chr7.2:6207894-6207913 MS.gene07084:intron 65.0%
AGGGCTACGCCCCTGATGGG+AGG - chr7.2:6209196-6209215 MS.gene07084:intron 70.0%
GTCCCCGGAAGATGCAGCCC+TGG + chr7.2:6207899-6207918 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 6206320 6211498 6206320 ID=MS.gene07084
chr7.2 mRNA 6206320 6211498 6206320 ID=MS.gene07084.t1;Parent=MS.gene07084
chr7.2 exon 6211382 6211498 6211382 ID=MS.gene07084.t1.exon1;Parent=MS.gene07084.t1
chr7.2 CDS 6211382 6211498 6211382 ID=cds.MS.gene07084.t1;Parent=MS.gene07084.t1
chr7.2 exon 6211194 6211280 6211194 ID=MS.gene07084.t1.exon2;Parent=MS.gene07084.t1
chr7.2 CDS 6211194 6211280 6211194 ID=cds.MS.gene07084.t1;Parent=MS.gene07084.t1
chr7.2 exon 6210972 6211037 6210972 ID=MS.gene07084.t1.exon3;Parent=MS.gene07084.t1
chr7.2 CDS 6210972 6211037 6210972 ID=cds.MS.gene07084.t1;Parent=MS.gene07084.t1
chr7.2 exon 6210828 6210887 6210828 ID=MS.gene07084.t1.exon4;Parent=MS.gene07084.t1
chr7.2 CDS 6210828 6210887 6210828 ID=cds.MS.gene07084.t1;Parent=MS.gene07084.t1
chr7.2 exon 6210678 6210734 6210678 ID=MS.gene07084.t1.exon5;Parent=MS.gene07084.t1
chr7.2 CDS 6210678 6210734 6210678 ID=cds.MS.gene07084.t1;Parent=MS.gene07084.t1
chr7.2 exon 6210127 6210256 6210127 ID=MS.gene07084.t1.exon6;Parent=MS.gene07084.t1
chr7.2 CDS 6210127 6210256 6210127 ID=cds.MS.gene07084.t1;Parent=MS.gene07084.t1
chr7.2 exon 6209876 6209943 6209876 ID=MS.gene07084.t1.exon7;Parent=MS.gene07084.t1
chr7.2 CDS 6209876 6209943 6209876 ID=cds.MS.gene07084.t1;Parent=MS.gene07084.t1
chr7.2 exon 6209633 6209725 6209633 ID=MS.gene07084.t1.exon8;Parent=MS.gene07084.t1
chr7.2 CDS 6209633 6209725 6209633 ID=cds.MS.gene07084.t1;Parent=MS.gene07084.t1
chr7.2 exon 6209482 6209529 6209482 ID=MS.gene07084.t1.exon9;Parent=MS.gene07084.t1
chr7.2 CDS 6209482 6209529 6209482 ID=cds.MS.gene07084.t1;Parent=MS.gene07084.t1
chr7.2 exon 6207950 6208108 6207950 ID=MS.gene07084.t1.exon10;Parent=MS.gene07084.t1
chr7.2 CDS 6207950 6208108 6207950 ID=cds.MS.gene07084.t1;Parent=MS.gene07084.t1
chr7.2 exon 6207409 6207519 6207409 ID=MS.gene07084.t1.exon11;Parent=MS.gene07084.t1
chr7.2 CDS 6207409 6207519 6207409 ID=cds.MS.gene07084.t1;Parent=MS.gene07084.t1
chr7.2 exon 6207082 6207177 6207082 ID=MS.gene07084.t1.exon12;Parent=MS.gene07084.t1
chr7.2 CDS 6207082 6207177 6207082 ID=cds.MS.gene07084.t1;Parent=MS.gene07084.t1
chr7.2 exon 6206785 6206856 6206785 ID=MS.gene07084.t1.exon13;Parent=MS.gene07084.t1
chr7.2 CDS 6206785 6206856 6206785 ID=cds.MS.gene07084.t1;Parent=MS.gene07084.t1
chr7.2 exon 6206645 6206681 6206645 ID=MS.gene07084.t1.exon14;Parent=MS.gene07084.t1
chr7.2 CDS 6206645 6206681 6206645 ID=cds.MS.gene07084.t1;Parent=MS.gene07084.t1
chr7.2 exon 6206506 6206540 6206506 ID=MS.gene07084.t1.exon15;Parent=MS.gene07084.t1
chr7.2 CDS 6206506 6206540 6206506 ID=cds.MS.gene07084.t1;Parent=MS.gene07084.t1
chr7.2 exon 6206320 6206385 6206320 ID=MS.gene07084.t1.exon16;Parent=MS.gene07084.t1
chr7.2 CDS 6206320 6206385 6206320 ID=cds.MS.gene07084.t1;Parent=MS.gene07084.t1
Gene Sequence

>MS.gene07084

ATGGACGCGAAGGATATTCTTGGTTTGCACAAAAACTCATTTCCATCTTCTCTTGATAATAAAAAATCTCGACCTCCCAAAGAATCTCAGAGAAAACCTGATGGCATTTCACGCGAGGTTAGCTTATTCATTCATTACTTTATCATCTCTTTATTCATTTTTTTATTTTATTTTTATTTATCACTGATTTGATTTTAATTGAGTTGTATTATTTTTAGGTTTATGCACTTACTGGTGGAATGCCACCTCTTATGCCATCAATTGATGCTTCTCAATTGAAGAAAAAGCCTCCTACTCACGAAAAGGTTTGAACTTATTTGATTCAACTTATTTATTGACGTTAGCACTTGTGAAGAGGGAAAACAGTTTCCATAAGTCCTTTTCAGCTTATTTTCATAAGCACTTATGTGATACATGCTTTATTAAGATGATTATCCAAACGGGGTTATTATGTTTTTCAGGTTACTTGGCAATGGCTTCCTTTCACCAATTCTGCTCGTAAAGATGATCTTCATCTTTACCATTGGGTCAGTCACAATATGCGATTGATTATTATCTGTGATTATTTATAAGCATGAAAGTTTTTTGTTTATGTGTCGCTTCTTTTTCAGGTTCGAGTAGTCAATGGTGTTCTACCTACTGGAGACTATTCTTTTGCCAAGTACAACAAGGTAGCTAAATTTGTGTTACTCTCTCTCTTCATGCTTCCTATTCATTGCTATATTTTTGGTTTTATTCACAATCTTCTATTTGATGTGATGCAGTCTGTTGACATCATCAAATACACAGACGAGGAATACGAAAAGTATTTGACAGATCCTGTGGGTAATCATGTCTAATTGTACAGTTTTTTGGAAATTTATGGATAAGTTTGCTTAAACTACAACAATGTTGCAAATTTATGCTAACCGAACTGAAATTTATTTTATGTTATGTATCAAGTTGTGATTGTGGGACCTTCATTGACTTCTATTGTAAGTTTAGACATGAAAAATGAGGGGAAATTTGCAATCAATTTATATATCAATGGACCTGGTTATTTGCAAGGACCTCTTTTGTACACTGCACCCCATTGTACAATATATCATATATAATTATCCTGTTTTAACTGCATTTGTTAAGTTCTACGCTTTACTCAATTGAAAGTTTAAACACATAGACATTCTATCAGTTTTTTTGTATTAATCTCCTTTACCAAGTGTTCAATGCATTAATATACCTTATTCTGCTTTATCTACCTAGATGTGGACCAAGGAGGAGACAAATGAATTATTTGATTTGTGTGAGAGGTTCGATCTCCGTTTTGTTGTTATAGCTGATAGGTTCCCATCATCTCGGACTGTAGAGGAGTTAAAGGATCGATATTATAGTGGTACGTCTTTGTTGAATAATTATTATATGCTGCACTCCACAATTCATGTCATTTAACTCAAACTTTCAATTGTTAAAAAAAAAAAAAAAAAAAAACCTTTCAATTCTGATGATATGGAGACTGCATGAGCAAAAATGTGATATTTTGAACTTGATTTTTTTATCACACGTCCCTGTCATGTAGTGTTGCGGGCTATATTACTTGCCAGGGCTGCATCTTCCGGGGACATTGCAACACATCCTATCATTAAGGTGAAGTCAAATTTTATATTAATGTATGATGTTTTTGAAGTAGTTACTCTCTTTTGTCTCTTAGTATATATTTGCCGTTAAAACAGACTCTCACCTGCCTTAAGCCATTGCCATGTGTTGATAGTAACCTGTTCTCTCTTTTCAATGTAGGAACCATATAATGTTTCACAAGAAATGGAGCGAAAACGGGCACTGTCCATGGTCCTCTCCCAAACAAGACAACAAGAGAAAAGAGATGAAGAGGTTCTGTCCTTCAAAGAAAAAAAATAATACTTCATACATTTCTGCCATCGGTTTACCCTCATAATAAATGACGTCTGGTTACTTATATTGTTTTATTTTGCAGGTTCTTATTGAAGCAAAAAGAATAGCCGAGTTACGGATGGCTTCTAAGGTAATTGTTTCAAGATTGATTTACCAATACACCATTAATTTAGGAGTTGTTATCATGATTCAAGGTCAAGTTTCCTATGATCTAATTCTGATTTCTTGATTAATCTTGATTATAAATTCCTATCCATCACTTTGAATATTAGGGAATGTTTCCTAGTATGCTGTGCGCATTTTCGTTTGCATGGGAGGCAGCGGCGAAGCTCGCAAAAAATTTATGCAGGGGCCAACTATAAAGAAATTTTTTTAAAAAAAAAACATATTAAATTCAAGGATAAAATATATTTTTAGTCCCATAAATTATAATTTTTTAGGTTTAGTCCTTAAAAAAATTATCCAATTTTTGTCTCAGTTTTTTAAAATTTTACAAAAAAAAGTGGTTTTAGTCTTGAATTTAATCTCTAACAAAAAATTAAGGACTAAAATTAACAAAATCTTAGGAACTTAACATAAAAATCGCTATTTAGAAACGCTGGGCAAAATGCGTTTCAAGAACCCAATTTCATCAATAATTGTCTGTTTAATAATAGATTAATAATGTCTTTTCAAATGTAAATAAATAGGTTATTTGCAAGAAACTCATTGTCCATTTAATTTGTCTATGATTATTGTCTTGATAATTTTTATTGTTGAAAGAGGTTTCTCTATTGTTGTTATTGAGACCGAAAGTATCAAACCAATACAAATAAATATATCAATCTTGTAGTAATTTTTTTACTTTATTATTTATGCTAATTTTTGCAACTAAATTTATTTGGGGTAGCTCAATGTTTATTATTTAGGGTAGCCGGATGTAAATACATACCGACCACTTCATGAATAATATTTTTTTTGGGGTAGCCAAGGCTACCCCTCCCATATGAAGGGCTACGCCCCTGATGGGAGGTAAACTAAAGTTAGAGCTTTGTAGTCATAGCTTAATCACTATTAATTTTTACTGACAGTAAAATATATGCTGAAGTAGTGTTCTTGAATCACTTGTTCTTGTTTTATACTACCTCCGTTCCTTTTTAAGTGTCACTTTTTAACATTTTACACAAACCAAGACACTCAATAATTGTTACTTTTTCTTATACAATAATCTATACTTTTACTATAATAGCCTTAGTCATTTAATATCTTATTTCATATATTTCTCTCTCCACAATAAATAACTAAGGGTAATGTTGGTAAAACAACATTTATTGTTGCATTGACCTTTGAAAGTGACAGTTAAATAGGAACAAAAAATTTCTCCAAAAGTGACACTTAAAAAGTGACAGTTAAATAGGGAGTAATTACCAATTTGGGGCAACAAAATTTGTGGAATGTATAAAATGTATGTCACATGATCTGTACTTGCACATGCCTGGGATATTGATTTTATACATTTTTCAGGTTACTGAACAGTCTCAATTGGCTGTTGCTTCAAATGCTGATGCAGAAGTTGCAGAGAGGGCTGTCCCTGGTGAAACTGTATCTCCTTCGAATGTGCAACTTCCACAAATGGTTGTGCCTTCTGCAGATAATGCTTCTACTCTAGCTTCTCTTCGCATGGTAAGTTATTTGAGTAAACTACCATTTTGTGTTCTGAAATTGTAAGTGTCTGGCAATTTGGGCACCCTAAATAGCGAAATATCAAATTGCTTCCCTAAATTGTCTAACGACAGTCAAAATGCTTCCTCCGTCAAGTAGCTCTGTTAGAGGTGCTGGTGTATCATGTTAAGCAGAACACTAGGCACAATTTTCATAATGTTGCATTACATCACTAGTCTCTAACCCGAAGGAAATTTGTGCTAGGGCACTAGACAAGCTAACTTAAAACTTCGTTTTGTAGCACTGGCATTAACCAGAATTCTGATCTTCAAAATTTTGATCTTGCATTGATCAAAATATTTCAAATAATTTTTTTTAATGAGGGGCAATTTGCACAATTTATTAAATTCTCATACTTCATAGCATTATCTGATAGTGAGAAATGTTTCAGCTTCGTGTATATTTGAGGACATATGCACTCGAGCAAATGGTGCAAGCTTCAAACTCAACTGCTGGAGTTCGGACTATCAAACGGGTTGAGCAAACATTGCAAGATCTCGGGGTTTGTCCCGACTACCTTAACTTTTTATGCAGCTTGCTTTTCTTTCTTTCTTTCTAAAACATTGCTGACAAATTTATTGCTATTAACCAAATTAACCATCTTTCTTAATACCCATGAATTAGATAGTAGAATCTTATATTGAGGCAGAAATATGTTAAATCCAAATGAAATTTTTGTAACGAGTTGAGTTTGACCATATGTTTGGGTTCATGATGCATTCTGTGATTCCAGGTAAATTTGAAACCGAGGGTTCCAACAAAAGCTGTTTGTGCAGAGCATCTTGAACTAAGAAGAGAAATACTAACATGGCTGAATCTCCAGAAACAGGTATATTGGTATAAGAAAGTTGAGAGAATCTTATTTTGCTGAATGTATTCATTCATTCATGTTTATAACCAGATGGTGATTTCACTTGTTAGAATTTTCATGGGCTTGCAATATTCCTGTCTAATGTATGATTGTTTATAGAATCAGCAACATTCTATACTGGCTTATTTTCCCTCACCCCCCAAATTTCTTTGATTTAATTACTTGTTGTGAAATACGTGGCAGGTGCAATATAAAGAGGCCGAAGGTTCATCTTTCCGTGATGGATCCTACGGTGAAACACCAGGCACACCAAAGGTCGGAAATTCATATTTTTATTTCTTTTTACTAGTTTCCCTTCTATTGTTTTAGGCTCGTGGTTTGGAAACTACTGACACATTTGTTTCGTGGTGGGAATCAGGATCGTACATTTATTCCCGATTCGTTGAATTTTGGAGGTAATATATATTAATTTTGTTTGTACCTGCTTTCTAAATTTCTATAAAGTAAGGGAAATGCCATCTATTTATCATTAAACATATGCATAAAACTGTTGTTTCAGGCGAAAGGGTTGGCAAAAAGGACCAAAAACGCAAGGTACACCACAATTTTTTTTGTCTAATTATTCTCCCGTCAATTGATTAATTTTACATTTACTTTTGGACCATTTTAATAATGTACTATTACTGGTTGGTCTCGGGAACTTTATTTGTATAGGGGCATGGAGCTCCACCTACAGCAGCTCATAAAAGACCTAGAAAACAAAAGGCCTCGGATCTTTAA

Protein sequence

>MS.gene07084.t1

MDAKDILGLHKNSFPSSLDNKKSRPPKESQRKPDGISREVYALTGGMPPLMPSIDASQLKKKPPTHEKVTWQWLPFTNSARKDDLHLYHWVRVVNGVLPTGDYSFAKYNKSVDIIKYTDEEYEKYLTDPMWTKEETNELFDLCERFDLRFVVIADRFPSSRTVEELKDRYYSVLRAILLARAASSGDIATHPIIKEPYNVSQEMERKRALSMVLSQTRQQEKRDEEVLIEAKRIAELRMASKVTEQSQLAVASNADAEVAERAVPGETVSPSNVQLPQMVVPSADNASTLASLRMLRVYLRTYALEQMVQASNSTAGVRTIKRVEQTLQDLGVNLKPRVPTKAVCAEHLELRREILTWLNLQKQVQYKEAEGSSFRDGSYGETPGTPKDRTFIPDSLNFGGERVGKKDQKRKGHGAPPTAAHKRPRKQKASDL