Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08918.t1 | RHN42372.1 | 98.5 | 587 | 9 | 0 | 1 | 587 | 35 | 621 | 1.60E-296 | 1028.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08918.t1 | A0JMW6 | 23.6 | 254 | 173 | 6 | 263 | 513 | 205 | 440 | 3.3e-08 | 61.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08918.t1 | A0A396GMQ1 | 98.5 | 587 | 9 | 0 | 1 | 587 | 35 | 621 | 1.2e-296 | 1028.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene08918 | -0.82832 | 9.60E-55 | -1.69E-46 |
| MS.gene049180 | MS.gene08918 | 0.882329 | 1.14E-70 | -1.69E-46 |
| MS.gene049222 | MS.gene08918 | -0.806027 | 1.00E-49 | -1.69E-46 |
| MS.gene049281 | MS.gene08918 | 0.815957 | 7.08E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene08918 | 0.850073 | 2.15E-60 | -1.69E-46 |
| MS.gene050129 | MS.gene08918 | 0.811015 | 8.65E-51 | -1.69E-46 |
| MS.gene050170 | MS.gene08918 | -0.842766 | 2.12E-58 | -1.69E-46 |
| MS.gene050323 | MS.gene08918 | -0.802707 | 4.94E-49 | -1.69E-46 |
| MS.gene050381 | MS.gene08918 | 0.802409 | 5.69E-49 | -1.69E-46 |
| MS.gene050496 | MS.gene08918 | -0.816977 | 4.19E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene08918 | -0.832843 | 7.50E-56 | -1.69E-46 |
| MS.gene050577 | MS.gene08918 | -0.837444 | 5.18E-57 | -1.69E-46 |
| MS.gene050747 | MS.gene08918 | -0.807327 | 5.34E-50 | -1.69E-46 |
| MS.gene050818 | MS.gene08918 | 0.816709 | 4.81E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene08918 | -0.837261 | 5.77E-57 | -1.69E-46 |
| MS.gene050871 | MS.gene08918 | -0.836534 | 8.85E-57 | -1.69E-46 |
| MS.gene050883 | MS.gene08918 | 0.816112 | 6.54E-52 | -1.69E-46 |
| MS.gene051044 | MS.gene08918 | 0.817006 | 4.12E-52 | -1.69E-46 |
| MS.gene051440 | MS.gene08918 | 0.802526 | 5.38E-49 | -1.69E-46 |
| MS.gene051946 | MS.gene08918 | 0.824506 | 7.78E-54 | -1.69E-46 |
| MS.gene051963 | MS.gene08918 | 0.810891 | 9.20E-51 | -1.69E-46 |
| MS.gene052015 | MS.gene08918 | 0.873799 | 1.11E-67 | -1.69E-46 |
| MS.gene052164 | MS.gene08918 | -0.835988 | 1.22E-56 | -1.69E-46 |
| MS.gene052482 | MS.gene08918 | -0.806127 | 9.57E-50 | -1.69E-46 |
| MS.gene052486 | MS.gene08918 | -0.811699 | 6.14E-51 | -1.69E-46 |
| MS.gene052494 | MS.gene08918 | 0.85252 | 4.37E-61 | -1.69E-46 |
| MS.gene052503 | MS.gene08918 | -0.834077 | 3.69E-56 | -1.69E-46 |
| MS.gene052823 | MS.gene08918 | -0.84225 | 2.90E-58 | -1.69E-46 |
| MS.gene052825 | MS.gene08918 | -0.845218 | 4.66E-59 | -1.69E-46 |
| MS.gene053097 | MS.gene08918 | 0.858223 | 9.55E-63 | -1.69E-46 |
| MS.gene053203 | MS.gene08918 | -0.853825 | 1.85E-61 | -1.69E-46 |
| MS.gene053549 | MS.gene08918 | 0.840658 | 7.61E-58 | -1.69E-46 |
| MS.gene054706 | MS.gene08918 | 0.807061 | 6.08E-50 | -1.69E-46 |
| MS.gene05470 | MS.gene08918 | -0.872517 | 2.99E-67 | -1.69E-46 |
| MS.gene054954 | MS.gene08918 | -0.801744 | 7.79E-49 | -1.69E-46 |
| MS.gene054959 | MS.gene08918 | 0.806106 | 9.66E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene08918 | -0.80354 | 3.32E-49 | -1.69E-46 |
| MS.gene055502 | MS.gene08918 | -0.825766 | 3.92E-54 | -1.69E-46 |
| MS.gene055577 | MS.gene08918 | -0.839321 | 1.70E-57 | -1.69E-46 |
| MS.gene055719 | MS.gene08918 | 0.876942 | 9.34E-69 | -1.69E-46 |
| MS.gene05589 | MS.gene08918 | -0.849786 | 2.59E-60 | -1.69E-46 |
| MS.gene056310 | MS.gene08918 | 0.81625 | 6.09E-52 | -1.69E-46 |
| MS.gene056311 | MS.gene08918 | 0.814865 | 1.24E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene08918 | -0.833956 | 3.96E-56 | -1.69E-46 |
| MS.gene056510 | MS.gene08918 | -0.807318 | 5.36E-50 | -1.69E-46 |
| MS.gene056550 | MS.gene08918 | 0.80564 | 1.21E-49 | -1.69E-46 |
| MS.gene057014 | MS.gene08918 | 0.830633 | 2.63E-55 | -1.69E-46 |
| MS.gene05726 | MS.gene08918 | 0.837616 | 4.68E-57 | -1.69E-46 |
| MS.gene058157 | MS.gene08918 | -0.819026 | 1.44E-52 | -1.69E-46 |
| MS.gene058334 | MS.gene08918 | 0.824856 | 6.43E-54 | -1.69E-46 |
| MS.gene05837 | MS.gene08918 | -0.841869 | 3.66E-58 | -1.69E-46 |
| MS.gene058544 | MS.gene08918 | -0.846677 | 1.87E-59 | -1.69E-46 |
| MS.gene058838 | MS.gene08918 | -0.800596 | 1.34E-48 | -1.69E-46 |
| MS.gene058996 | MS.gene08918 | 0.808387 | 3.17E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene08918 | -0.81133 | 7.39E-51 | -1.69E-46 |
| MS.gene059023 | MS.gene08918 | -0.832982 | 6.93E-56 | -1.69E-46 |
| MS.gene059103 | MS.gene08918 | 0.861801 | 7.95E-64 | -1.69E-46 |
| MS.gene05914 | MS.gene08918 | -0.801731 | 7.84E-49 | -1.69E-46 |
| MS.gene059480 | MS.gene08918 | 0.871653 | 5.80E-67 | -1.69E-46 |
| MS.gene059718 | MS.gene08918 | -0.80153 | 8.62E-49 | -1.69E-46 |
| MS.gene059837 | MS.gene08918 | -0.808401 | 3.15E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene08918 | -0.803445 | 3.47E-49 | -1.69E-46 |
| MS.gene06000 | MS.gene08918 | -0.818095 | 2.34E-52 | -1.69E-46 |
| MS.gene060187 | MS.gene08918 | 0.81951 | 1.12E-52 | -1.69E-46 |
| MS.gene06027 | MS.gene08918 | -0.813151 | 2.96E-51 | -1.69E-46 |
| MS.gene060358 | MS.gene08918 | 0.807436 | 5.06E-50 | -1.69E-46 |
| MS.gene060595 | MS.gene08918 | 0.817418 | 3.33E-52 | -1.69E-46 |
| MS.gene060762 | MS.gene08918 | -0.805251 | 1.46E-49 | -1.69E-46 |
| MS.gene060778 | MS.gene08918 | -0.805174 | 1.52E-49 | -1.69E-46 |
| MS.gene06077 | MS.gene08918 | -0.858725 | 6.76E-63 | -1.69E-46 |
| MS.gene060982 | MS.gene08918 | -0.822108 | 2.83E-53 | -1.69E-46 |
| MS.gene061044 | MS.gene08918 | 0.824066 | 9.87E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08918.t1 | AT1G23170 | 60.109 | 549 | 201 | 7 | 17 | 549 | 15 | 561 | 0.0 | 628 |
| MS.gene08918.t1 | AT1G70770 | 60.886 | 542 | 198 | 6 | 19 | 549 | 14 | 552 | 0.0 | 610 |
| MS.gene08918.t1 | AT1G70770 | 60.886 | 542 | 198 | 6 | 19 | 549 | 14 | 552 | 0.0 | 610 |
| MS.gene08918.t1 | AT1G23170 | 55.191 | 549 | 182 | 8 | 17 | 549 | 15 | 515 | 0.0 | 541 |
| MS.gene08918.t1 | AT3G11880 | 48.571 | 455 | 198 | 13 | 111 | 549 | 3 | 437 | 1.57e-125 | 377 |
| MS.gene08918.t1 | AT3G11880 | 50.000 | 432 | 187 | 12 | 134 | 549 | 3 | 421 | 2.42e-124 | 374 |
| MS.gene08918.t1 | AT3G11880 | 50.729 | 343 | 141 | 9 | 111 | 442 | 3 | 328 | 1.92e-99 | 306 |
| MS.gene08918.t1 | AT3G11880 | 48.000 | 300 | 128 | 9 | 111 | 399 | 3 | 285 | 7.65e-75 | 241 |
Find 158 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCTTTCTGCTTTGGTCTT+TGG | 0.139887 | 4.4:-31685292 | MS.gene08918:CDS |
| TCTCAGTTGGTTTGTATTCT+TGG | 0.158367 | 4.4:-31683842 | MS.gene08918:CDS |
| ATGCGGTTTGCGGATTATTT+TGG | 0.187926 | 4.4:-31686418 | MS.gene08918:CDS |
| CTACCCCAACATGGAATCTT+TGG | 0.234838 | 4.4:-31682527 | MS.gene08918:CDS |
| CCCTAAAGCACGGGCTGTTT+TGG | 0.242352 | 4.4:-31683638 | MS.gene08918:CDS |
| CTCTCTCAGAATGGGATATA+TGG | 0.269677 | 4.4:+31683406 | None:intergenic |
| CCAAAACAGCCCGTGCTTTA+GGG | 0.272787 | 4.4:+31683638 | None:intergenic |
| TTCCTTGGGTGAAATTGTTC+AGG | 0.284035 | 4.4:-31686363 | MS.gene08918:CDS |
| CACTTAGTTCCTTTCTGCTT+TGG | 0.285709 | 4.4:-31685299 | MS.gene08918:CDS |
| ACCAAAACAGCCCGTGCTTT+AGG | 0.295717 | 4.4:+31683637 | None:intergenic |
| TGTTTCATTGCTTTACTTCC+AGG | 0.297609 | 4.4:+31683365 | None:intergenic |
| AACCCTTGGTCACAGTTTGC+TGG | 0.323214 | 4.4:+31685244 | None:intergenic |
| CAACCCGCAATCCAGGGATT+TGG | 0.335667 | 4.4:-31683781 | MS.gene08918:CDS |
| TCAGCGCTGCTCAGTTTCCT+TGG | 0.337666 | 4.4:-31686378 | MS.gene08918:CDS |
| ACCTTAGGTTTCTTCACCTT+TGG | 0.337808 | 4.4:+31686666 | None:intergenic |
| GTGGCTCTTGGCGGTTCTCC+TGG | 0.348034 | 4.4:-31683383 | MS.gene08918:CDS |
| AAATCCAAAGATTCCATGTT+GGG | 0.364480 | 4.4:+31682523 | None:intergenic |
| GTTGAAGGTGAGTTTGTTAC+CGG | 0.374708 | 4.4:+31686908 | None:intergenic |
| AAACCAAATCCCTGGATTGC+GGG | 0.379701 | 4.4:+31683778 | None:intergenic |
| TGTGACCAAGGGTTCCAAAA+AGG | 0.391826 | 4.4:-31685235 | MS.gene08918:CDS |
| GCTTGTAGCATTCAGTGCTT+TGG | 0.393155 | 4.4:+31683140 | None:intergenic |
| TATTCTCGAATGCTCAGAAC+TGG | 0.397435 | 4.4:+31682473 | None:intergenic |
| AGCAGCGTCGTTTCCGTTGA+AGG | 0.401884 | 4.4:+31686893 | None:intergenic |
| TAATAAGAGCATCAGGCTTT+CGG | 0.411863 | 4.4:+31684101 | None:intergenic |
| GCTTCCGCCACCGTCACCTT+AGG | 0.420485 | 4.4:+31686651 | None:intergenic |
| GATCGCTGCTTCGATCTAAC+TGG | 0.421839 | 4.4:+31686783 | None:intergenic |
| CAGCGCTGCTCAGTTTCCTT+GGG | 0.422296 | 4.4:-31686377 | MS.gene08918:CDS |
| GGGAGATCCTAAAGAACTTT+AGG | 0.423156 | 4.4:-31682827 | MS.gene08918:CDS |
| CCTATAGTGGTTAGCAAAAG+TGG | 0.424512 | 4.4:-31683804 | MS.gene08918:CDS |
| GTGGGAGATGGATCCGGAGG+GGG | 0.426014 | 4.4:+31687034 | None:intergenic |
| GAAGATTGATGCAGCTGATC+TGG | 0.427235 | 4.4:-31686622 | MS.gene08918:CDS |
| AAAGTGGCAACCCGCAATCC+AGG | 0.430699 | 4.4:-31683788 | MS.gene08918:CDS |
| CAAGTCGCTTGAGTTGCATT+CGG | 0.432376 | 4.4:-31686868 | MS.gene08918:CDS |
| TACTGTATTGCCCAAATTGA+GGG | 0.436105 | 4.4:-31684080 | MS.gene08918:CDS |
| CCTAAAGAACTTTAGGCAAA+AGG | 0.442468 | 4.4:-31682820 | MS.gene08918:intron |
| ATCTCCCTGAGTGGCTCATA+AGG | 0.444202 | 4.4:+31682843 | None:intergenic |
| GATGATGATGTGGATCGGTC+AGG | 0.450841 | 4.4:-31686729 | MS.gene08918:CDS |
| TGAGGCGAGGACTGCGGCGG+AGG | 0.454431 | 4.4:-31686823 | MS.gene08918:CDS |
| GGCGGTGTGGGAGATGGATC+CGG | 0.460314 | 4.4:+31687028 | None:intergenic |
| ACAAGTAACTTCAAAATCTC+AGG | 0.462196 | 4.4:-31685205 | MS.gene08918:intron |
| CTCACGGCGCCGATCACGGC+TGG | 0.463140 | 4.4:-31686989 | MS.gene08918:CDS |
| GACCTTCTGCCAGCCGTGAT+CGG | 0.468288 | 4.4:+31686980 | None:intergenic |
| GGTGAGTTTGTTACCGGTAC+CGG | 0.468566 | 4.4:+31686914 | None:intergenic |
| GCACTGAATGCTACAAGCTA+TGG | 0.469110 | 4.4:-31683135 | MS.gene08918:CDS |
| CTGAGAGAGGTGGCTCTTGG+CGG | 0.469550 | 4.4:-31683392 | MS.gene08918:CDS |
| ATTGATTCCTCCTCCAGCAT+TGG | 0.470236 | 4.4:-31683587 | MS.gene08918:CDS |
| TCAGTAGGAGATCTCTCAGT+TGG | 0.471593 | 4.4:-31683855 | MS.gene08918:CDS |
| GGACAGTATTCTTACTGACT+TGG | 0.473081 | 4.4:-31685271 | MS.gene08918:CDS |
| TGTGGGAGATGGATCCGGAG+GGG | 0.474914 | 4.4:+31687033 | None:intergenic |
| GTGGATCGGTCAGGGGAGAA+TGG | 0.475403 | 4.4:-31686720 | MS.gene08918:CDS |
| ACCTTTACTCTAGCTGAAGA+TGG | 0.476260 | 4.4:+31683538 | None:intergenic |
| AATACAGTAATAAGAGCATC+AGG | 0.478128 | 4.4:+31684094 | None:intergenic |
| CGCTTGCTACAATGTTCTCC+TGG | 0.480089 | 4.4:+31682922 | None:intergenic |
| CGGATCAAAGTTTCCAATGC+TGG | 0.481600 | 4.4:+31683574 | None:intergenic |
| GTTAACGGTGCTGTAAGAAA+AGG | 0.482437 | 4.4:-31683616 | MS.gene08918:CDS |
| ACCGTGCTTGCTGTGGCTGT+TGG | 0.484447 | 4.4:-31682562 | MS.gene08918:CDS |
| TTACTGTATTGCCCAAATTG+AGG | 0.486297 | 4.4:-31684081 | MS.gene08918:CDS |
| AAGAGCCACCTCTCTCAGAA+TGG | 0.486370 | 4.4:+31683397 | None:intergenic |
| ATTCTGAGAGAGGTGGCTCT+TGG | 0.487210 | 4.4:-31683395 | MS.gene08918:CDS |
| GGAAGAGTTTCACGAGGCCA+TGG | 0.488867 | 4.4:-31682607 | MS.gene08918:CDS |
| TAGCCAGCAAACTGTGACCA+AGG | 0.494511 | 4.4:-31685247 | MS.gene08918:CDS |
| GCGGAATCTCCTACCTATAG+TGG | 0.495190 | 4.4:-31683817 | MS.gene08918:CDS |
| AGATTCGGCGGTGTGGGAGA+TGG | 0.497613 | 4.4:+31687022 | None:intergenic |
| GCTGCTTCTTTCGATACTCC+AGG | 0.497984 | 4.4:+31683187 | None:intergenic |
| TGAGCAGGAGAAAGTTTACC+AGG | 0.499942 | 4.4:-31682940 | MS.gene08918:intron |
| GCAACCATCCATACAATCAC+TGG | 0.500036 | 4.4:+31684025 | None:intergenic |
| TCCTTGGGTGAAATTGTTCA+GGG | 0.500312 | 4.4:-31686362 | MS.gene08918:CDS |
| AAGCAGCTTCTATTGCACTT+TGG | 0.504270 | 4.4:-31683171 | MS.gene08918:CDS |
| AAGGAAGCTAACGGCGTCGC+CGG | 0.508318 | 4.4:-31686933 | MS.gene08918:CDS |
| GATACAGATGATGCGGTTTG+CGG | 0.509299 | 4.4:-31686428 | MS.gene08918:CDS |
| GTCTCAGATATGTGAGAAAG+TGG | 0.510412 | 4.4:+31685369 | None:intergenic |
| AGAGCCACCTCTCTCAGAAT+GGG | 0.511188 | 4.4:+31683398 | None:intergenic |
| CTTCTTATGCTTCTTCGCGT+AGG | 0.511297 | 4.4:+31686956 | None:intergenic |
| AATTTCGCTATCATAGCAGC+AGG | 0.515210 | 4.4:-31683323 | MS.gene08918:CDS |
| GGTGTGGGAGATGGATCCGG+AGG | 0.515556 | 4.4:+31687031 | None:intergenic |
| TGTCTCCTTATGAGCCACTC+AGG | 0.516916 | 4.4:-31682848 | MS.gene08918:CDS |
| AAATATTGCAAGATAATCTC+AGG | 0.519787 | 4.4:-31682628 | MS.gene08918:CDS |
| CCTTTACTCTAGCTGAAGAT+GGG | 0.524391 | 4.4:+31683539 | None:intergenic |
| GATTGTATGGATGGTTGCTC+AGG | 0.525541 | 4.4:-31684020 | MS.gene08918:intron |
| GGAGTTAGATTCGGCGGTGT+GGG | 0.527264 | 4.4:+31687016 | None:intergenic |
| CAGAAAGGAACTAAGTGCCT+CGG | 0.527844 | 4.4:+31685305 | None:intergenic |
| ACCAACAGCCACAGCAAGCA+CGG | 0.529034 | 4.4:+31682561 | None:intergenic |
| CGCGAAGAAGCATAAGAAGA+AGG | 0.529676 | 4.4:-31686952 | MS.gene08918:CDS |
| TATACAAGACATCAGTTGAC+TGG | 0.531046 | 4.4:-31685344 | MS.gene08918:CDS |
| ATGATGATGTGGATCGGTCA+GGG | 0.531980 | 4.4:-31686728 | MS.gene08918:CDS |
| AAAAGCTGAAGAGGTGAAGA+AGG | 0.533059 | 4.4:-31686697 | MS.gene08918:CDS |
| AAGCTGCAAAACCAAATCCC+TGG | 0.534627 | 4.4:+31683770 | None:intergenic |
| GTGTGGGAGATGGATCCGGA+GGG | 0.536705 | 4.4:+31687032 | None:intergenic |
| AGAAAGGAACTAAGTGCCTC+GGG | 0.536775 | 4.4:+31685306 | None:intergenic |
| GCTAACGGCGTCGCCGGTAC+CGG | 0.537790 | 4.4:-31686927 | MS.gene08918:CDS |
| CGCCGATCACGGCTGGCAGA+AGG | 0.538888 | 4.4:-31686982 | MS.gene08918:CDS |
| GTGAGATGAGGAGTTAGATT+CGG | 0.541523 | 4.4:+31687007 | None:intergenic |
| GACAGTATTCTTACTGACTT+GGG | 0.542880 | 4.4:-31685270 | MS.gene08918:CDS |
| TCATCTCACGGCGCCGATCA+CGG | 0.544498 | 4.4:-31686993 | MS.gene08918:CDS |
| CCCATCTTCAGCTAGAGTAA+AGG | 0.544992 | 4.4:-31683539 | MS.gene08918:intron |
| TGCATTCGGAGGATCGGAGA+AGG | 0.547304 | 4.4:-31686854 | MS.gene08918:CDS |
| AATATTTGTTGCTTTAGCGT+TGG | 0.547458 | 4.4:-31684131 | MS.gene08918:CDS |
| TTGGTTTGTATTCTTGGTCG+CGG | 0.548699 | 4.4:-31683836 | MS.gene08918:CDS |
| GGTAACAAACTCACCTTCAA+CGG | 0.548782 | 4.4:-31686906 | MS.gene08918:CDS |
| AAAGTTTCCAATGCTGGAGG+AGG | 0.556105 | 4.4:+31683580 | None:intergenic |
| TTTGTCCACCCCTAAAGCAC+GGG | 0.556433 | 4.4:-31683647 | MS.gene08918:CDS |
| GACCTTTACCGTGCTTGCTG+TGG | 0.557982 | 4.4:-31682569 | MS.gene08918:CDS |
| GAAATCCAAAGATTCCATGT+TGG | 0.561519 | 4.4:+31682522 | None:intergenic |
| ACAGGCTACAGAAAGATTTG+AGG | 0.563848 | 4.4:-31683429 | MS.gene08918:intron |
| TTGAGTTGCATTCGGAGGAT+CGG | 0.568593 | 4.4:-31686860 | MS.gene08918:CDS |
| CACTGAATGCTACAAGCTAT+GGG | 0.569907 | 4.4:-31683134 | MS.gene08918:intron |
| CAAAACAGCCCGTGCTTTAG+GGG | 0.574054 | 4.4:+31683639 | None:intergenic |
| GGCATCGTTTGAGCAGAATG+AGG | 0.575026 | 4.4:-31686452 | MS.gene08918:CDS |
| AAAACCAAATCCCTGGATTG+CGG | 0.578328 | 4.4:+31683777 | None:intergenic |
| AGCCACAGCAAGCACGGTAA+AGG | 0.579436 | 4.4:+31682567 | None:intergenic |
| GCTATCATAGCAGCAGGAGA+AGG | 0.581836 | 4.4:-31683317 | MS.gene08918:intron |
| ACTCCCAGTGATTGTATGGA+TGG | 0.582697 | 4.4:-31684029 | MS.gene08918:CDS |
| GAAACCTAAGGTGACGGTGG+CGG | 0.583163 | 4.4:-31686655 | MS.gene08918:CDS |
| ATCTATGTGCAGGCTTCAGT+AGG | 0.583240 | 4.4:-31683870 | MS.gene08918:intron |
| AGGAGTTAGATTCGGCGGTG+TGG | 0.588248 | 4.4:+31687015 | None:intergenic |
| GTCCAAAGACCAAAGCAGAA+AGG | 0.592435 | 4.4:+31685290 | None:intergenic |
| GAAGAGTTTCACGAGGCCAT+GGG | 0.594706 | 4.4:-31682606 | MS.gene08918:CDS |
| GGAGAATGGAAAAGCTGAAG+AGG | 0.595415 | 4.4:-31686706 | MS.gene08918:CDS |
| AACAGCCCGTGCTTTAGGGG+TGG | 0.598573 | 4.4:+31683642 | None:intergenic |
| GTCGCTTGAGTTGCATTCGG+AGG | 0.598827 | 4.4:-31686865 | MS.gene08918:CDS |
| CATATATCCCATTCTGAGAG+AGG | 0.602504 | 4.4:-31683405 | MS.gene08918:CDS |
| ACATCAACAATCTTAGCCAC+AGG | 0.603144 | 4.4:+31686334 | None:intergenic |
| CAACCATCCATACAATCACT+GGG | 0.608838 | 4.4:+31684026 | None:intergenic |
| GAAGGAAAATTCTTGAGGCG+AGG | 0.609341 | 4.4:-31686836 | MS.gene08918:CDS |
| AAGTGGCAACCCGCAATCCA+GGG | 0.609912 | 4.4:-31683787 | MS.gene08918:CDS |
| GTCTCCTTATGAGCCACTCA+GGG | 0.610196 | 4.4:-31682847 | MS.gene08918:CDS |
| GTGATCGGCGCCGTGAGATG+AGG | 0.611262 | 4.4:+31686995 | None:intergenic |
| GCGGAGGCTGAATTTGATGA+TGG | 0.617872 | 4.4:-31686807 | MS.gene08918:CDS |
| TCCCTGAACAATTTCACCCA+AGG | 0.618599 | 4.4:+31686361 | None:intergenic |
| CGATGAAGACGATGATGATG+TGG | 0.624368 | 4.4:-31686739 | MS.gene08918:CDS |
| ATTCTCGAATGCTCAGAACT+GGG | 0.627893 | 4.4:+31682474 | None:intergenic |
| TCTTGAGGCGAGGACTGCGG+CGG | 0.630323 | 4.4:-31686826 | MS.gene08918:CDS |
| CTTTACTCTAGCTGAAGATG+GGG | 0.634564 | 4.4:+31683540 | None:intergenic |
| TGATGATGTGGATCGGTCAG+GGG | 0.634863 | 4.4:-31686727 | MS.gene08918:CDS |
| TTTACTCTAGCTGAAGATGG+GGG | 0.635009 | 4.4:+31683541 | None:intergenic |
| CAGTTGACTGGATCAATCGT+CGG | 0.638176 | 4.4:-31685332 | MS.gene08918:CDS |
| GAATCTAACTCCTCATCTCA+CGG | 0.640221 | 4.4:-31687005 | MS.gene08918:CDS |
| ACCAAAGGTGAAGAAACCTA+AGG | 0.640238 | 4.4:-31686667 | MS.gene08918:CDS |
| AATCCAAAGATTCCATGTTG+GGG | 0.642323 | 4.4:+31682524 | None:intergenic |
| ATCAAAGTTTCCAATGCTGG+AGG | 0.642389 | 4.4:+31683577 | None:intergenic |
| GATCAATCGTCGGTCTCCCG+AGG | 0.644658 | 4.4:-31685322 | MS.gene08918:CDS |
| TTCTTTAGGATCTCCCTGAG+TGG | 0.645060 | 4.4:+31682834 | None:intergenic |
| AATTCTTGAGGCGAGGACTG+CGG | 0.646090 | 4.4:-31686829 | MS.gene08918:CDS |
| CATAAGAAGAAGGAAGCTAA+CGG | 0.647003 | 4.4:-31686942 | MS.gene08918:CDS |
| AGCCAGCAAACTGTGACCAA+GGG | 0.647478 | 4.4:-31685246 | MS.gene08918:CDS |
| TGTATTGCCCAAATTGAGGG+AGG | 0.648811 | 4.4:-31684077 | MS.gene08918:CDS |
| GAAGAAGGTTAAGAAACCAA+AGG | 0.649224 | 4.4:-31686682 | MS.gene08918:CDS |
| TCGGAGAAGGAAAATTCTTG+AGG | 0.649487 | 4.4:-31686841 | MS.gene08918:CDS |
| ATGAGGAGATACAGATGATG+CGG | 0.649967 | 4.4:-31686435 | MS.gene08918:CDS |
| ATATCCCATTCTGAGAGAGG+TGG | 0.657382 | 4.4:-31683402 | MS.gene08918:CDS |
| GGTGAAGAAACCTAAGGTGA+CGG | 0.658046 | 4.4:-31686661 | MS.gene08918:CDS |
| TTACTCTAGCTGAAGATGGG+GGG | 0.666207 | 4.4:+31683542 | None:intergenic |
| ATTGTTCAGGGAGTCACCTG+TGG | 0.666973 | 4.4:-31686350 | MS.gene08918:CDS |
| GAATGAGAAAGCATTGACAA+CGG | 0.668814 | 4.4:-31682692 | MS.gene08918:CDS |
| AAGACGATGATGATGTGGAT+CGG | 0.676350 | 4.4:-31686734 | MS.gene08918:CDS |
| AGATGAGGAGTTAGATTCGG+CGG | 0.685801 | 4.4:+31687010 | None:intergenic |
| GAAGAAACCTAAGGTGACGG+TGG | 0.705385 | 4.4:-31686658 | MS.gene08918:CDS |
| ATCTCAGGAAGAGTTTCACG+AGG | 0.743689 | 4.4:-31682613 | MS.gene08918:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTGATTATTATTATTTAGT+GGG | - | chr4.4:31683350-31683369 | MS.gene08918:CDS | 15.0% |
| !! | GTGTTAATTAAACATTATTT+GGG | + | chr4.4:31684583-31684602 | None:intergenic | 15.0% |
| !! | TATATAAGTTCACATTATAA+AGG | + | chr4.4:31683798-31683817 | None:intergenic | 15.0% |
| !! | TGTGTTAATTAAACATTATT+TGG | + | chr4.4:31684584-31684603 | None:intergenic | 15.0% |
| !! | TTAATGTTGAGATTTAATTA+CGG | - | chr4.4:31682978-31682997 | MS.gene08918:intron | 15.0% |
| !!! | ATATTATTTTACCAACTATT+CGG | + | chr4.4:31685028-31685047 | None:intergenic | 15.0% |
| !!! | GAACTTATATAGTTTTTTTA+AGG | - | chr4.4:31683807-31683826 | MS.gene08918:CDS | 15.0% |
| !!! | TATATAGTTTTTTTAAGGTT+TGG | - | chr4.4:31683812-31683831 | MS.gene08918:CDS | 15.0% |
| !!! | TGAATATGAATATGATTTTA+GGG | + | chr4.4:31685284-31685303 | None:intergenic | 15.0% |
| !!! | TTGAATATGAATATGATTTT+AGG | + | chr4.4:31685285-31685304 | None:intergenic | 15.0% |
| !! | AAGCAAATAACAAAACATAA+TGG | + | chr4.4:31685862-31685881 | None:intergenic | 20.0% |
| !! | AAGTAAAATTCACATAAACA+GGG | + | chr4.4:31685208-31685227 | None:intergenic | 20.0% |
| !! | AATAAGTATATAGAGTTTCA+TGG | + | chr4.4:31686554-31686573 | None:intergenic | 20.0% |
| !! | AATATTAAAAATCTATGTGC+AGG | - | chr4.4:31685656-31685675 | MS.gene08918:intron | 20.0% |
| !! | AGAAATCAAACAATAAAATC+AGG | + | chr4.4:31686252-31686271 | None:intergenic | 20.0% |
| !! | ATAGAGCTAAATAATATGTT+TGG | - | chr4.4:31683566-31683585 | MS.gene08918:CDS | 20.0% |
| !! | ATCAATATCAAGACAAATAA+AGG | - | chr4.4:31684753-31684772 | MS.gene08918:intron | 20.0% |
| !! | ATCATACTTATATCTTAACT+AGG | - | chr4.4:31683495-31683514 | MS.gene08918:intron | 20.0% |
| !! | CCTGATAAAACATAAATATT+CGG | + | chr4.4:31684145-31684164 | None:intergenic | 20.0% |
| !! | GACTTGTAAAAAAAACTTAT+TGG | - | chr4.4:31685234-31685253 | MS.gene08918:CDS | 20.0% |
| !! | TAAGTAAAATTCACATAAAC+AGG | + | chr4.4:31685209-31685228 | None:intergenic | 20.0% |
| !! | TATTTGCTCTTATTCTTTAT+TGG | - | chr4.4:31686570-31686589 | MS.gene08918:intron | 20.0% |
| !! | TCATACTTATATTCTTAACT+AGG | - | chr4.4:31683538-31683557 | MS.gene08918:intron | 20.0% |
| !!! | AACATATTCTTCATTTTGAA+AGG | + | chr4.4:31685327-31685346 | None:intergenic | 20.0% |
| !!! | CACTGATTATTATTATTTAG+TGG | - | chr4.4:31683349-31683368 | MS.gene08918:CDS | 20.0% |
| !!! | GACACATTAATATTTTAACT+TGG | + | chr4.4:31683886-31683905 | None:intergenic | 20.0% |
| !!! | GTTATTATTGGATTTTGTTT+AGG | + | chr4.4:31684431-31684450 | None:intergenic | 20.0% |
| !!! | GTTTTTTTGTTCACTATTAA+GGG | - | chr4.4:31684495-31684514 | MS.gene08918:intron | 20.0% |
| !!! | TATTTTAACTTGGTAGAAAA+AGG | + | chr4.4:31683876-31683895 | None:intergenic | 20.0% |
| !!! | TTTATTTTGATGACAAATCA+TGG | - | chr4.4:31683238-31683257 | MS.gene08918:intron | 20.0% |
| !!! | TTTTTGTAATCTTTTTTACG+AGG | - | chr4.4:31686462-31686481 | MS.gene08918:intron | 20.0% |
| !!! | TTTTTTTTTACCCTTTCAAA+AGG | - | chr4.4:31685594-31685613 | MS.gene08918:intron | 20.0% |
| ! | AAATATTGCAAGATAATCTC+AGG | - | chr4.4:31686908-31686927 | MS.gene08918:CDS | 25.0% |
| ! | AATGAAGATCCAAATAGAAA+AGG | + | chr4.4:31684699-31684718 | None:intergenic | 25.0% |
| ! | ACAAATCTTGTAACAGAAAT+TGG | + | chr4.4:31683407-31683426 | None:intergenic | 25.0% |
| ! | ATGAAGATCCAAATAGAAAA+GGG | + | chr4.4:31684698-31684717 | None:intergenic | 25.0% |
| ! | CAAATCTTGTAACAGAAATT+GGG | + | chr4.4:31683406-31683425 | None:intergenic | 25.0% |
| ! | TATAAAACATTTCAGTACTG+TGG | + | chr4.4:31683957-31683976 | None:intergenic | 25.0% |
| ! | TTCAACTGTTATATATGTTC+TGG | - | chr4.4:31683311-31683330 | MS.gene08918:intron | 25.0% |
| !! | CCGAATATTTATGTTTTATC+AGG | - | chr4.4:31684142-31684161 | MS.gene08918:intron | 25.0% |
| !! | GAAAAGTATGTAAATGTTTC+TGG | - | chr4.4:31685792-31685811 | MS.gene08918:intron | 25.0% |
| !! | GATGTTGTTTATCATAATCT+TGG | - | chr4.4:31684085-31684104 | MS.gene08918:CDS | 25.0% |
| !! | TATATATGTTCTGGTGTTTT+TGG | - | chr4.4:31683320-31683339 | MS.gene08918:CDS | 25.0% |
| !! | TCAATATGTTGCTATTATAC+AGG | - | chr4.4:31686089-31686108 | MS.gene08918:intron | 25.0% |
| !!! | ATGGACTGATTTAACTATTT+TGG | - | chr4.4:31686816-31686835 | MS.gene08918:CDS | 25.0% |
| !!! | GGTTTTTTTGTTCACTATTA+AGG | - | chr4.4:31684494-31684513 | MS.gene08918:intron | 25.0% |
| !!! | TATGTTTGGAGCTTTTAATT+TGG | - | chr4.4:31683580-31683599 | MS.gene08918:CDS | 25.0% |
| !!! | TGCATGTTTGTTTTTGAATT+AGG | - | chr4.4:31683063-31683082 | MS.gene08918:intron | 25.0% |
| !!! | TTGTACTTATCCTTTTGAAA+GGG | + | chr4.4:31685607-31685626 | None:intergenic | 25.0% |
| !!! | TTTAATTACGGTTTTGTGAT+TGG | - | chr4.4:31682990-31683009 | MS.gene08918:intron | 25.0% |
| AAATCCAAAGATTCCATGTT+GGG | + | chr4.4:31687016-31687035 | None:intergenic | 30.0% | |
| AACATAAACCAAACTAGCTA+AGG | - | chr4.4:31684461-31684480 | MS.gene08918:intron | 30.0% | |
| ACAAAACATAATGGTGAAGA+TGG | + | chr4.4:31685853-31685872 | None:intergenic | 30.0% | |
| ACAAATAAAGGAACTTCTGT+AGG | - | chr4.4:31684765-31684784 | MS.gene08918:intron | 30.0% | |
| ACAAGTAACTTCAAAATCTC+AGG | - | chr4.4:31684331-31684350 | MS.gene08918:intron | 30.0% | |
| ACGAATATTCTGATATTTCC+AGG | + | chr4.4:31684831-31684850 | None:intergenic | 30.0% | |
| AGAAAGAAACGTGTTAAACT+TGG | - | chr4.4:31683621-31683640 | MS.gene08918:CDS | 30.0% | |
| AGATGCCATATCAACTAAAT+GGG | - | chr4.4:31685547-31685566 | MS.gene08918:intron | 30.0% | |
| AGGGAGGATAAAAAATATCA+AGG | - | chr4.4:31685475-31685494 | MS.gene08918:intron | 30.0% | |
| ATATCTTAACTAGGAACTCA+GGG | - | chr4.4:31683504-31683523 | MS.gene08918:intron | 30.0% | |
| ATTCTTTATTGGATATGAGC+AGG | - | chr4.4:31686581-31686600 | MS.gene08918:intron | 30.0% | |
| CAAAATACCTTCTAAACACT+TGG | + | chr4.4:31686299-31686318 | None:intergenic | 30.0% | |
| CCAAATCAAATTTAACCTAC+TGG | + | chr4.4:31685160-31685179 | None:intergenic | 30.0% | |
| CCAGTAGGTTAAATTTGATT+TGG | - | chr4.4:31685157-31685176 | MS.gene08918:intron | 30.0% | |
| CTCAATCTACATCTAAATCA+GGG | + | chr4.4:31685358-31685377 | None:intergenic | 30.0% | |
| CTCTTAAAGTTGAAAGAACT+AGG | - | chr4.4:31685089-31685108 | MS.gene08918:intron | 30.0% | |
| GACTTATAAAAACTGCTACA+TGG | + | chr4.4:31683653-31683672 | None:intergenic | 30.0% | |
| TAGATGCCATATCAACTAAA+TGG | - | chr4.4:31685546-31685565 | MS.gene08918:intron | 30.0% | |
| TATATCTTAACTAGGAACTC+AGG | - | chr4.4:31683503-31683522 | MS.gene08918:intron | 30.0% | |
| TCAAATTTAACCTACTGGAA+TGG | + | chr4.4:31685155-31685174 | None:intergenic | 30.0% | |
| TCTCAATCTACATCTAAATC+AGG | + | chr4.4:31685359-31685378 | None:intergenic | 30.0% | |
| TTGGGACAAGATTATTTACT+AGG | + | chr4.4:31684565-31684584 | None:intergenic | 30.0% | |
| ! | CTAGTTCTTTCAACTTTAAG+AGG | + | chr4.4:31685091-31685110 | None:intergenic | 30.0% |
| ! | GACTTTTCTCGTTGATATAT+CGG | - | chr4.4:31682938-31682957 | MS.gene08918:intron | 30.0% |
| ! | GTTGTACTTATCCTTTTGAA+AGG | + | chr4.4:31685608-31685627 | None:intergenic | 30.0% |
| ! | TTAGCTAGTTTGGTTTATGT+TGG | + | chr4.4:31684462-31684481 | None:intergenic | 30.0% |
| ! | TTTTCTCACCCTTTTCTATT+TGG | - | chr4.4:31684687-31684706 | MS.gene08918:intron | 30.0% |
| ! | TTTTTATCCTCCCTCAATTT+GGG | + | chr4.4:31685469-31685488 | None:intergenic | 30.0% |
| !! | AATACAGTAATAAGAGCATC+AGG | + | chr4.4:31685445-31685464 | None:intergenic | 30.0% |
| !! | AATATTTGTTGCTTTAGCGT+TGG | - | chr4.4:31685405-31685424 | MS.gene08918:intron | 30.0% |
| !! | ATATGATTTTAGGGACCAAA+AGG | + | chr4.4:31685275-31685294 | None:intergenic | 30.0% |
| !! | TTGAAGTATTTTTCCCCTTT+TGG | - | chr4.4:31684859-31684878 | MS.gene08918:intron | 30.0% |
| !!! | ATTTTTTTTCCAGACAATCC+TGG | - | chr4.4:31686331-31686350 | MS.gene08918:intron | 30.0% |
| !!! | TTTTTTATCCTCCCTCAATT+TGG | + | chr4.4:31685470-31685489 | None:intergenic | 30.0% |
| AAAAACTCCCAGTGATTGTA+TGG | - | chr4.4:31685503-31685522 | MS.gene08918:intron | 35.0% | |
| AACATTTCAGTACTGTGGTA+TGG | + | chr4.4:31683952-31683971 | None:intergenic | 35.0% | |
| AAGACTTATCTTACTAGGTC+CGG | + | chr4.4:31684910-31684929 | None:intergenic | 35.0% | |
| AATCAAATGACCCTCCAAAA+GGG | + | chr4.4:31684876-31684895 | None:intergenic | 35.0% | |
| AATCCAAAGATTCCATGTTG+GGG | + | chr4.4:31687015-31687034 | None:intergenic | 35.0% | |
| ACAATGGCAAACAAAGAACA+TGG | + | chr4.4:31684984-31685003 | None:intergenic | 35.0% | |
| ACATTTCAGTACTGTGGTAT+GGG | + | chr4.4:31683951-31683970 | None:intergenic | 35.0% | |
| AGATGAACCAAGTGTTTAGA+AGG | - | chr4.4:31686289-31686308 | MS.gene08918:intron | 35.0% | |
| AGTTAAATCAGTCCATGTCA+AGG | + | chr4.4:31686812-31686831 | None:intergenic | 35.0% | |
| ATATCCTGAATCACAAAGAC+AGG | - | chr4.4:31684539-31684558 | MS.gene08918:intron | 35.0% | |
| ATTAAGCATTAGCGAGATGA+AGG | + | chr4.4:31685639-31685658 | None:intergenic | 35.0% | |
| ATTTGATTCATGTTGCCAAC+CGG | - | chr4.4:31684888-31684907 | MS.gene08918:intron | 35.0% | |
| CATAAGAAGAAGGAAGCTAA+CGG | - | chr4.4:31682594-31682613 | MS.gene08918:CDS | 35.0% | |
| CCACAATGGTGTAAAATTTC+TGG | - | chr4.4:31684626-31684645 | MS.gene08918:intron | 35.0% | |
| CCAGCTTCAAATGAAATTGT+TGG | - | chr4.4:31683731-31683750 | MS.gene08918:intron | 35.0% | |
| CCTAAAGAACTTTAGGCAAA+AGG | - | chr4.4:31686716-31686735 | MS.gene08918:CDS | 35.0% | |
| CTGAATAATGAAAGTCAAGC+AGG | + | chr4.4:31685053-31685072 | None:intergenic | 35.0% | |
| GAAATCCAAAGATTCCATGT+TGG | + | chr4.4:31687017-31687036 | None:intergenic | 35.0% | |
| GAAGAAGGTTAAGAAACCAA+AGG | - | chr4.4:31682854-31682873 | MS.gene08918:CDS | 35.0% | |
| GATTCAGGATATGGATTCTT+CGG | + | chr4.4:31684531-31684550 | None:intergenic | 35.0% | |
| GTTAAATCAGTCCATGTCAA+GGG | + | chr4.4:31686811-31686830 | None:intergenic | 35.0% | |
| TACTGTATTGCCCAAATTGA+GGG | - | chr4.4:31685456-31685475 | MS.gene08918:intron | 35.0% | |
| TAGCAAAAGTCATTGATCCT+CGG | - | chr4.4:31683695-31683714 | MS.gene08918:intron | 35.0% | |
| TATACAAGACATCAGTTGAC+TGG | - | chr4.4:31684192-31684211 | MS.gene08918:intron | 35.0% | |
| TATCATAAACCCTCATCGTA+TGG | + | chr4.4:31683471-31683490 | None:intergenic | 35.0% | |
| TATCGGTAGGGTTATTGAAT+TGG | - | chr4.4:31682955-31682974 | MS.gene08918:intron | 35.0% | |
| TGAAAAAGCTTTCTGATGAC+TGG | - | chr4.4:31686646-31686665 | MS.gene08918:CDS | 35.0% | |
| TGCTACTCAAATTTGCAGAA+AGG | + | chr4.4:31683680-31683699 | None:intergenic | 35.0% | |
| TGTCTTTGTGATTCAGGATA+TGG | + | chr4.4:31684540-31684559 | None:intergenic | 35.0% | |
| TGTTGTTATGTGAATTGTGC+TGG | - | chr4.4:31683276-31683295 | MS.gene08918:intron | 35.0% | |
| TGTTTCATTGCTTTACTTCC+AGG | + | chr4.4:31686174-31686193 | None:intergenic | 35.0% | |
| TTAAATCAGTCCATGTCAAG+GGG | + | chr4.4:31686810-31686829 | None:intergenic | 35.0% | |
| TTAAGCATTAGCGAGATGAA+GGG | + | chr4.4:31685638-31685657 | None:intergenic | 35.0% | |
| TTACTGTATTGCCCAAATTG+AGG | - | chr4.4:31685455-31685474 | MS.gene08918:intron | 35.0% | |
| TTCTCGTTGATATATCGGTA+GGG | - | chr4.4:31682943-31682962 | MS.gene08918:intron | 35.0% | |
| TTTCTCGTTGATATATCGGT+AGG | - | chr4.4:31682942-31682961 | MS.gene08918:intron | 35.0% | |
| ! | AAGTATTTTTCCCCTTTTGG+AGG | - | chr4.4:31684862-31684881 | MS.gene08918:intron | 35.0% |
| ! | AGTATTTTTCCCCTTTTGGA+GGG | - | chr4.4:31684863-31684882 | MS.gene08918:intron | 35.0% |
| ! | ATGAGCCCATTTAGTTGATA+TGG | + | chr4.4:31685555-31685574 | None:intergenic | 35.0% |
| ! | ATTTTGTGACCTTTGCCTTT+TGG | - | chr4.4:31685257-31685276 | MS.gene08918:CDS | 35.0% |
| ! | CAATGGTGTAAAATTTCTGG+AGG | - | chr4.4:31684629-31684648 | MS.gene08918:intron | 35.0% |
| ! | CCAACAATTTCATTTGAAGC+TGG | + | chr4.4:31683734-31683753 | None:intergenic | 35.0% |
| ! | CCAGAAATTTTACACCATTG+TGG | + | chr4.4:31684629-31684648 | None:intergenic | 35.0% |
| ! | CCTTTTGCCTAAAGTTCTTT+AGG | + | chr4.4:31686719-31686738 | None:intergenic | 35.0% |
| ! | CTGAATCTGTTTCGATGTTT+TGG | - | chr4.4:31684008-31684027 | MS.gene08918:intron | 35.0% |
| ! | TTTTGCTAACCACTATAGGT+AGG | + | chr4.4:31685731-31685750 | None:intergenic | 35.0% |
| !! | ATTGATTTTACATGACCTGC+AGG | - | chr4.4:31685378-31685397 | MS.gene08918:intron | 35.0% |
| !! | ATTTGATTTGGAGAGTTGCA+TGG | - | chr4.4:31685169-31685188 | MS.gene08918:intron | 35.0% |
| !! | GAATGAGAAAGCATTGACAA+CGG | - | chr4.4:31686844-31686863 | MS.gene08918:CDS | 35.0% |
| !! | GACAGTATTCTTACTGACTT+GGG | - | chr4.4:31684266-31684285 | MS.gene08918:intron | 35.0% |
| !! | TAATAAGAGCATCAGGCTTT+CGG | + | chr4.4:31685438-31685457 | None:intergenic | 35.0% |
| !! | TCTCAGTTGGTTTGTATTCT+TGG | - | chr4.4:31685694-31685713 | MS.gene08918:intron | 35.0% |
| !!! | TATGTTCTGGTGTTTTTGGA+TGG | - | chr4.4:31683324-31683343 | MS.gene08918:CDS | 35.0% |
| AAAACCAAATCCCTGGATTG+CGG | + | chr4.4:31685762-31685781 | None:intergenic | 40.0% | |
| AAAAGCTGAAGAGGTGAAGA+AGG | - | chr4.4:31682839-31682858 | MS.gene08918:CDS | 40.0% | |
| AAAGTCATTGATCCTCGGAA+AGG | - | chr4.4:31683700-31683719 | MS.gene08918:intron | 40.0% | |
| AACAGCTATGGTACGAAAAG+GGG | + | chr4.4:31685829-31685848 | None:intergenic | 40.0% | |
| AAGCAGCTTCTATTGCACTT+TGG | - | chr4.4:31686365-31686384 | MS.gene08918:CDS | 40.0% | |
| AATTTCGCTATCATAGCAGC+AGG | - | chr4.4:31686213-31686232 | MS.gene08918:intron | 40.0% | |
| ACAGGCTACAGAAAGATTTG+AGG | - | chr4.4:31686107-31686126 | MS.gene08918:intron | 40.0% | |
| ACATCAACAATCTTAGCCAC+AGG | + | chr4.4:31683205-31683224 | None:intergenic | 40.0% | |
| ACCAAAGGTGAAGAAACCTA+AGG | - | chr4.4:31682869-31682888 | MS.gene08918:CDS | 40.0% | |
| ACCTTAGGTTTCTTCACCTT+TGG | + | chr4.4:31682873-31682892 | None:intergenic | 40.0% | |
| ACCTTTACTCTAGCTGAAGA+TGG | + | chr4.4:31686001-31686020 | None:intergenic | 40.0% | |
| ACTAGCTAAGGCAGAACAAT+AGG | - | chr4.4:31684473-31684492 | MS.gene08918:intron | 40.0% | |
| ACTTACAAATCCCCTTGACA+TGG | - | chr4.4:31686797-31686816 | MS.gene08918:CDS | 40.0% | |
| ATCAAAGTTTCCAATGCTGG+AGG | + | chr4.4:31685962-31685981 | None:intergenic | 40.0% | |
| ATCAAATGACCCTCCAAAAG+GGG | + | chr4.4:31684875-31684894 | None:intergenic | 40.0% | |
| ATGAGGAGATACAGATGATG+CGG | - | chr4.4:31683101-31683120 | MS.gene08918:intron | 40.0% | |
| CAACAAATATTGCAACCTGC+AGG | + | chr4.4:31685396-31685415 | None:intergenic | 40.0% | |
| CAACAGCTATGGTACGAAAA+GGG | + | chr4.4:31685830-31685849 | None:intergenic | 40.0% | |
| CAACCATCCATACAATCACT+GGG | + | chr4.4:31685513-31685532 | None:intergenic | 40.0% | |
| CAACTATTCGGAACTACCAA+AGG | + | chr4.4:31685016-31685035 | None:intergenic | 40.0% | |
| CACTGAATGCTACAAGCTAT+GGG | - | chr4.4:31686402-31686421 | MS.gene08918:CDS | 40.0% | |
| CACTTAGTTCCTTTCTGCTT+TGG | - | chr4.4:31684237-31684256 | MS.gene08918:intron | 40.0% | |
| CCACCAAGACTTATCTTACT+AGG | + | chr4.4:31684915-31684934 | None:intergenic | 40.0% | |
| CCTAGTAAGATAAGTCTTGG+TGG | - | chr4.4:31684912-31684931 | MS.gene08918:intron | 40.0% | |
| CCTATAGTGGTTAGCAAAAG+TGG | - | chr4.4:31685732-31685751 | MS.gene08918:intron | 40.0% | |
| CCTTTACTCTAGCTGAAGAT+GGG | + | chr4.4:31686000-31686019 | None:intergenic | 40.0% | |
| CTCTCTCAGAATGGGATATA+TGG | + | chr4.4:31686133-31686152 | None:intergenic | 40.0% | |
| CTTTACTCTAGCTGAAGATG+GGG | + | chr4.4:31685999-31686018 | None:intergenic | 40.0% | |
| GAATCAAATGACCCTCCAAA+AGG | + | chr4.4:31684877-31684896 | None:intergenic | 40.0% | |
| GAATCTAACTCCTCATCTCA+CGG | - | chr4.4:31682531-31682550 | MS.gene08918:CDS | 40.0% | |
| GGACCTAGTAAGATAAGTCT+TGG | - | chr4.4:31684909-31684928 | MS.gene08918:intron | 40.0% | |
| GGGAGATCCTAAAGAACTTT+AGG | - | chr4.4:31686709-31686728 | MS.gene08918:CDS | 40.0% | |
| GGTAACAAACTCACCTTCAA+CGG | - | chr4.4:31682630-31682649 | MS.gene08918:CDS | 40.0% | |
| GTCTCAGATATGTGAGAAAG+TGG | + | chr4.4:31684170-31684189 | None:intergenic | 40.0% | |
| GTGAGATGAGGAGTTAGATT+CGG | + | chr4.4:31682532-31682551 | None:intergenic | 40.0% | |
| GTGATCCTAGATGCAATAGA+CGG | + | chr4.4:31686779-31686798 | None:intergenic | 40.0% | |
| TAAGCATTAGCGAGATGAAG+GGG | + | chr4.4:31685637-31685656 | None:intergenic | 40.0% | |
| TCCTTGGGTGAAATTGTTCA+GGG | - | chr4.4:31683174-31683193 | MS.gene08918:CDS | 40.0% | |
| TCGGAGAAGGAAAATTCTTG+AGG | - | chr4.4:31682695-31682714 | MS.gene08918:intron | 40.0% | |
| TCTATCCGTCTATTGCATCT+AGG | - | chr4.4:31686771-31686790 | MS.gene08918:CDS | 40.0% | |
| TCTTCAGCTAGAGTAAAGGT+AGG | - | chr4.4:31686001-31686020 | MS.gene08918:intron | 40.0% | |
| TCTTTGTCATGAAACTGCTG+TGG | - | chr4.4:31684370-31684389 | MS.gene08918:intron | 40.0% | |
| TGGAGTTTCACAATGCAAAG+AGG | + | chr4.4:31683451-31683470 | None:intergenic | 40.0% | |
| TGTGAAACTCCATACGATGA+GGG | - | chr4.4:31683459-31683478 | MS.gene08918:intron | 40.0% | |
| TTAACCTACTGGAATGGAGA+TGG | + | chr4.4:31685149-31685168 | None:intergenic | 40.0% | |
| TTCCTTGGGTGAAATTGTTC+AGG | - | chr4.4:31683173-31683192 | MS.gene08918:CDS | 40.0% | |
| TTGTGAAACTCCATACGATG+AGG | - | chr4.4:31683458-31683477 | MS.gene08918:intron | 40.0% | |
| TTGTTCTGCCTTAGCTAGTT+TGG | + | chr4.4:31684472-31684491 | None:intergenic | 40.0% | |
| TTTACTCTAGCTGAAGATGG+GGG | + | chr4.4:31685998-31686017 | None:intergenic | 40.0% | |
| ! | AAGACGATGATGATGTGGAT+CGG | - | chr4.4:31682802-31682821 | MS.gene08918:intron | 40.0% |
| ! | CATATATCCCATTCTGAGAG+AGG | - | chr4.4:31686131-31686150 | MS.gene08918:intron | 40.0% |
| ! | CTTTGGTAGTTCCGAATAGT+TGG | - | chr4.4:31685014-31685033 | MS.gene08918:intron | 40.0% |
| ! | GCTAGTTTGGTTTATGTTGG+TGG | + | chr4.4:31684459-31684478 | None:intergenic | 40.0% |
| ! | GGACAGTATTCTTACTGACT+TGG | - | chr4.4:31684265-31684284 | MS.gene08918:intron | 40.0% |
| ! | GTGGTTGTTGTTAGTTGTGA+CGG | - | chr4.4:31684931-31684950 | MS.gene08918:intron | 40.0% |
| ! | TCAAAAATGACTTGCACCCA+TGG | + | chr4.4:31686949-31686968 | None:intergenic | 40.0% |
| ! | TCATGAGTGCTTTTATGACC+TGG | - | chr4.4:31684810-31684829 | MS.gene08918:intron | 40.0% |
| ! | TGACGGCATTTTGTGACTTT+GGG | - | chr4.4:31684948-31684967 | MS.gene08918:intron | 40.0% |
| ! | TGGTGTAAAATTTCTGGAGG+AGG | - | chr4.4:31684632-31684651 | MS.gene08918:intron | 40.0% |
| ! | TTCCTTTCTGCTTTGGTCTT+TGG | - | chr4.4:31684244-31684263 | MS.gene08918:intron | 40.0% |
| !! | ATGCGGTTTGCGGATTATTT+TGG | - | chr4.4:31683118-31683137 | MS.gene08918:intron | 40.0% |
| !! | CCACTTTTGCTAACCACTAT+AGG | + | chr4.4:31685735-31685754 | None:intergenic | 40.0% |
| !! | GTTAACGGTGCTGTAAGAAA+AGG | - | chr4.4:31685920-31685939 | MS.gene08918:intron | 40.0% |
| !! | GTTGAAGGTGAGTTTGTTAC+CGG | + | chr4.4:31682631-31682650 | None:intergenic | 40.0% |
| !! | TACTTGTTGCACAGCCTTTT+TGG | + | chr4.4:31684318-31684337 | None:intergenic | 40.0% |
| !! | TTGGTGGCTGGTGTTATTAT+TGG | + | chr4.4:31684443-31684462 | None:intergenic | 40.0% |
| !! | TTGGTTTGTATTCTTGGTCG+CGG | - | chr4.4:31685700-31685719 | MS.gene08918:intron | 40.0% |
| !! | TTTTAGGGACCAAAAGGCAA+AGG | + | chr4.4:31685269-31685288 | None:intergenic | 40.0% |
| !!! | TGTTGTTTTCTACCCCAACA+TGG | - | chr4.4:31687000-31687019 | MS.gene08918:CDS | 40.0% |
| AAACCAAATCCCTGGATTGC+GGG | + | chr4.4:31685761-31685780 | None:intergenic | 45.0% | |
| AAAGTTTCCAATGCTGGAGG+AGG | + | chr4.4:31685959-31685978 | None:intergenic | 45.0% | |
| AAGATGGGGGGAAAGTAACA+CGG | + | chr4.4:31685985-31686004 | None:intergenic | 45.0% | |
| AAGCTGCAAAACCAAATCCC+TGG | + | chr4.4:31685769-31685788 | None:intergenic | 45.0% | |
| ACTCCCAGTGATTGTATGGA+TGG | - | chr4.4:31685507-31685526 | MS.gene08918:intron | 45.0% | |
| AGAAAGGAACTAAGTGCCTC+GGG | + | chr4.4:31684233-31684252 | None:intergenic | 45.0% | |
| AGATGAGGAGTTAGATTCGG+CGG | + | chr4.4:31682529-31682548 | None:intergenic | 45.0% | |
| AGTAAAGGTAGGTGTTCAGC+TGG | - | chr4.4:31686012-31686031 | MS.gene08918:intron | 45.0% | |
| ATCTATGTGCAGGCTTCAGT+AGG | - | chr4.4:31685666-31685685 | MS.gene08918:intron | 45.0% | |
| ATCTCAGGAAGAGTTTCACG+AGG | - | chr4.4:31686923-31686942 | MS.gene08918:CDS | 45.0% | |
| ATGGATTCTTCGGATTCCAC+TGG | + | chr4.4:31684521-31684540 | None:intergenic | 45.0% | |
| CAGAAAGGAACTAAGTGCCT+CGG | + | chr4.4:31684234-31684253 | None:intergenic | 45.0% | |
| CAGTTGACTGGATCAATCGT+CGG | - | chr4.4:31684204-31684223 | MS.gene08918:intron | 45.0% | |
| CCAAAGGTGGACAAAGACAA+TGG | + | chr4.4:31685000-31685019 | None:intergenic | 45.0% | |
| CCATTGTCTTTGTCCACCTT+TGG | - | chr4.4:31684997-31685016 | MS.gene08918:intron | 45.0% | |
| CCCATCTTCAGCTAGAGTAA+AGG | - | chr4.4:31685997-31686016 | MS.gene08918:intron | 45.0% | |
| CGGATCAAAGTTTCCAATGC+TGG | + | chr4.4:31685965-31685984 | None:intergenic | 45.0% | |
| CTACCCCAACATGGAATCTT+TGG | - | chr4.4:31687009-31687028 | MS.gene08918:CDS | 45.0% | |
| CTATTCGGAACTACCAAAGG+TGG | + | chr4.4:31685013-31685032 | None:intergenic | 45.0% | |
| CTTATCTTACTAGGTCCGGT+TGG | + | chr4.4:31684906-31684925 | None:intergenic | 45.0% | |
| CTTCTTATGCTTCTTCGCGT+AGG | + | chr4.4:31682583-31682602 | None:intergenic | 45.0% | |
| GAAGATTGATGCAGCTGATC+TGG | - | chr4.4:31682914-31682933 | MS.gene08918:CDS | 45.0% | |
| GAAGGAAAATTCTTGAGGCG+AGG | - | chr4.4:31682700-31682719 | MS.gene08918:intron | 45.0% | |
| GAATATATCGCGCAGACAGA+TGG | + | chr4.4:31686753-31686772 | None:intergenic | 45.0% | |
| GATACAGATGATGCGGTTTG+CGG | - | chr4.4:31683108-31683127 | MS.gene08918:intron | 45.0% | |
| GATTGTATGGATGGTTGCTC+AGG | - | chr4.4:31685516-31685535 | MS.gene08918:intron | 45.0% | |
| GCAACAGCTATGGTACGAAA+AGG | + | chr4.4:31685831-31685850 | None:intergenic | 45.0% | |
| GCAACCATCCATACAATCAC+TGG | + | chr4.4:31685514-31685533 | None:intergenic | 45.0% | |
| GCACTGAATGCTACAAGCTA+TGG | - | chr4.4:31686401-31686420 | MS.gene08918:CDS | 45.0% | |
| GCTTGTAGCATTCAGTGCTT+TGG | + | chr4.4:31686399-31686418 | None:intergenic | 45.0% | |
| GGAGAATGGAAAAGCTGAAG+AGG | - | chr4.4:31682830-31682849 | MS.gene08918:CDS | 45.0% | |
| GGTGAAGAAACCTAAGGTGA+CGG | - | chr4.4:31682875-31682894 | MS.gene08918:CDS | 45.0% | |
| GTCCAAAGACCAAAGCAGAA+AGG | + | chr4.4:31684249-31684268 | None:intergenic | 45.0% | |
| GTTTCCATCTCCATTCCAGT+AGG | - | chr4.4:31685142-31685161 | MS.gene08918:intron | 45.0% | |
| TAGGCCTGTCTTTGTGATTC+AGG | + | chr4.4:31684546-31684565 | None:intergenic | 45.0% | |
| TCAGTAGGAGATCTCTCAGT+TGG | - | chr4.4:31685681-31685700 | MS.gene08918:intron | 45.0% | |
| TCCCTGAACAATTTCACCCA+AGG | + | chr4.4:31683178-31683197 | None:intergenic | 45.0% | |
| TGAGCAGGAGAAAGTTTACC+AGG | - | chr4.4:31686596-31686615 | MS.gene08918:intron | 45.0% | |
| TGTATTGCCCAAATTGAGGG+AGG | - | chr4.4:31685459-31685478 | MS.gene08918:intron | 45.0% | |
| TGTGACCAAGGGTTCCAAAA+AGG | - | chr4.4:31684301-31684320 | MS.gene08918:intron | 45.0% | |
| TGTTCACTATTAAGGGCCAG+TGG | - | chr4.4:31684502-31684521 | MS.gene08918:intron | 45.0% | |
| TTACTCTAGCTGAAGATGGG+GGG | + | chr4.4:31685997-31686016 | None:intergenic | 45.0% | |
| TTCGATACTCCAGGATTGTC+TGG | + | chr4.4:31686343-31686362 | None:intergenic | 45.0% | |
| ! | ACGGCATTTTGTGACTTTGG+GGG | - | chr4.4:31684950-31684969 | MS.gene08918:intron | 45.0% |
| ! | ATATCCCATTCTGAGAGAGG+TGG | - | chr4.4:31686134-31686153 | MS.gene08918:intron | 45.0% |
| ! | ATGATGATGTGGATCGGTCA+GGG | - | chr4.4:31682808-31682827 | MS.gene08918:intron | 45.0% |
| ! | ATTGATTCCTCCTCCAGCAT+TGG | - | chr4.4:31685949-31685968 | MS.gene08918:intron | 45.0% |
| ! | CAAGTCGCTTGAGTTGCATT+CGG | - | chr4.4:31682668-31682687 | MS.gene08918:CDS | 45.0% |
| ! | CGATGAAGACGATGATGATG+TGG | - | chr4.4:31682797-31682816 | MS.gene08918:intron | 45.0% |
| ! | CGCGAAGAAGCATAAGAAGA+AGG | - | chr4.4:31682584-31682603 | MS.gene08918:CDS | 45.0% |
| ! | GAACTTCTGTAGGTGCTATC+GGG | - | chr4.4:31684775-31684794 | MS.gene08918:intron | 45.0% |
| ! | GACGGCATTTTGTGACTTTG+GGG | - | chr4.4:31684949-31684968 | MS.gene08918:intron | 45.0% |
| ! | GGAACTTCTGTAGGTGCTAT+CGG | - | chr4.4:31684774-31684793 | MS.gene08918:intron | 45.0% |
| ! | GTGACGGCATTTTGTGACTT+TGG | - | chr4.4:31684947-31684966 | MS.gene08918:intron | 45.0% |
| ! | TTGAGTTGCATTCGGAGGAT+CGG | - | chr4.4:31682676-31682695 | MS.gene08918:CDS | 45.0% |
| ! | TTTTGTCCACCCCTAAAGCA+CGG | - | chr4.4:31685888-31685907 | MS.gene08918:intron | 45.0% |
| !! | GGCTCTGGTGTTTTTGCATT+TGG | - | chr4.4:31686033-31686052 | MS.gene08918:intron | 45.0% |
| !! | GTTTGGTTTATGTTGGTGGC+TGG | + | chr4.4:31684455-31684474 | None:intergenic | 45.0% |
| !! | TTCTTTAGGATCTCCCTGAG+TGG | + | chr4.4:31686705-31686724 | None:intergenic | 45.0% |
| !!! | GGATTTGGTTTTGCAGCTTG+TGG | - | chr4.4:31685770-31685789 | MS.gene08918:intron | 45.0% |
| AACCCTTGGTCACAGTTTGC+TGG | + | chr4.4:31684295-31684314 | None:intergenic | 50.0% | |
| AAGAGCCACCTCTCTCAGAA+TGG | + | chr4.4:31686142-31686161 | None:intergenic | 50.0% | |
| AATTCTTGAGGCGAGGACTG+CGG | - | chr4.4:31682707-31682726 | MS.gene08918:intron | 50.0% | |
| ACCAAAACAGCCCGTGCTTT+AGG | + | chr4.4:31685902-31685921 | None:intergenic | 50.0% | |
| ACCATTGTGGCACGTGTGAA+GGG | + | chr4.4:31684616-31684635 | None:intergenic | 50.0% | |
| AGAGCCACCTCTCTCAGAAT+GGG | + | chr4.4:31686141-31686160 | None:intergenic | 50.0% | |
| AGCCAGCAAACTGTGACCAA+GGG | - | chr4.4:31684290-31684309 | MS.gene08918:intron | 50.0% | |
| AGCTATGGTACGAAAAGGGG+TGG | + | chr4.4:31685826-31685845 | None:intergenic | 50.0% | |
| ATCTCCCTGAGTGGCTCATA+AGG | + | chr4.4:31686696-31686715 | None:intergenic | 50.0% | |
| ATTGTTCAGGGAGTCACCTG+TGG | - | chr4.4:31683186-31683205 | MS.gene08918:CDS | 50.0% | |
| CAAAACAGCCCGTGCTTTAG+GGG | + | chr4.4:31685900-31685919 | None:intergenic | 50.0% | |
| CCAAAACAGCCCGTGCTTTA+GGG | + | chr4.4:31685901-31685920 | None:intergenic | 50.0% | |
| GAAGAGTTTCACGAGGCCAT+GGG | - | chr4.4:31686930-31686949 | MS.gene08918:CDS | 50.0% | |
| GATCGCTGCTTCGATCTAAC+TGG | + | chr4.4:31682756-31682775 | None:intergenic | 50.0% | |
| GATGAAAACTACACCCCCTC+CGG | - | chr4.4:31682489-31682508 | MS.gene08918:CDS | 50.0% | |
| GCGGAATCTCCTACCTATAG+TGG | - | chr4.4:31685719-31685738 | MS.gene08918:intron | 50.0% | |
| GCGGAGGCTGAATTTGATGA+TGG | - | chr4.4:31682729-31682748 | MS.gene08918:intron | 50.0% | |
| GCTATCATAGCAGCAGGAGA+AGG | - | chr4.4:31686219-31686238 | MS.gene08918:intron | 50.0% | |
| GCTGCTTCTTTCGATACTCC+AGG | + | chr4.4:31686352-31686371 | None:intergenic | 50.0% | |
| GGCATCGTTTGAGCAGAATG+AGG | - | chr4.4:31683084-31683103 | MS.gene08918:intron | 50.0% | |
| GGTGAAGATGGCAACAGCTA+TGG | + | chr4.4:31685841-31685860 | None:intergenic | 50.0% | |
| GTCTCCTTATGAGCCACTCA+GGG | - | chr4.4:31686689-31686708 | MS.gene08918:CDS | 50.0% | |
| TAGCCAGCAAACTGTGACCA+AGG | - | chr4.4:31684289-31684308 | MS.gene08918:intron | 50.0% | |
| TATGGATGGTTGCTCAGGTG+AGG | - | chr4.4:31685521-31685540 | MS.gene08918:intron | 50.0% | |
| TCATAGCAGCAGGAGAAGGT+TGG | - | chr4.4:31686223-31686242 | MS.gene08918:intron | 50.0% | |
| TGGTACGAAAAGGGGTGGAA+AGG | + | chr4.4:31685821-31685840 | None:intergenic | 50.0% | |
| TGTCTCCTTATGAGCCACTC+AGG | - | chr4.4:31686688-31686707 | MS.gene08918:CDS | 50.0% | |
| TTTGTCCACCCCTAAAGCAC+GGG | - | chr4.4:31685889-31685908 | MS.gene08918:intron | 50.0% | |
| ! | ATTCTGAGAGAGGTGGCTCT+TGG | - | chr4.4:31686141-31686160 | MS.gene08918:intron | 50.0% |
| ! | CGCTTGCTACAATGTTCTCC+TGG | + | chr4.4:31686617-31686636 | None:intergenic | 50.0% |
| ! | GAAGAAACCTAAGGTGACGG+TGG | - | chr4.4:31682878-31682897 | MS.gene08918:CDS | 50.0% |
| ! | GATGATGATGTGGATCGGTC+AGG | - | chr4.4:31682807-31682826 | MS.gene08918:intron | 50.0% |
| ! | TGATGATGTGGATCGGTCAG+GGG | - | chr4.4:31682809-31682828 | MS.gene08918:intron | 50.0% |
| !! | GGTGAGTTTGTTACCGGTAC+CGG | + | chr4.4:31682625-31682644 | None:intergenic | 50.0% |
| !!! | CACAGCCTTTTTGGAACCCT+TGG | + | chr4.4:31684309-31684328 | None:intergenic | 50.0% |
| !!! | GCACGGGCTGTTTTGGTTAA+CGG | - | chr4.4:31685905-31685924 | MS.gene08918:intron | 50.0% |
| AAAGTGGCAACCCGCAATCC+AGG | - | chr4.4:31685748-31685767 | MS.gene08918:intron | 55.0% | |
| AAGTGGCAACCCGCAATCCA+GGG | - | chr4.4:31685749-31685768 | MS.gene08918:intron | 55.0% | |
| ACCAACAGCCACAGCAAGCA+CGG | + | chr4.4:31686978-31686997 | None:intergenic | 55.0% | |
| ACCCTTCACACGTGCCACAA+TGG | - | chr4.4:31684612-31684631 | MS.gene08918:intron | 55.0% | |
| AGCAGCGTCGTTTCCGTTGA+AGG | + | chr4.4:31682646-31682665 | None:intergenic | 55.0% | |
| AGCCACAGCAAGCACGGTAA+AGG | + | chr4.4:31686972-31686991 | None:intergenic | 55.0% | |
| AGGAGTTAGATTCGGCGGTG+TGG | + | chr4.4:31682524-31682543 | None:intergenic | 55.0% | |
| CAACCCGCAATCCAGGGATT+TGG | - | chr4.4:31685755-31685774 | MS.gene08918:intron | 55.0% | |
| CACCATTGTGGCACGTGTGA+AGG | + | chr4.4:31684617-31684636 | None:intergenic | 55.0% | |
| CAGCGCTGCTCAGTTTCCTT+GGG | - | chr4.4:31683159-31683178 | MS.gene08918:CDS | 55.0% | |
| GGAAGAGTTTCACGAGGCCA+TGG | - | chr4.4:31686929-31686948 | MS.gene08918:CDS | 55.0% | |
| GGAGTTAGATTCGGCGGTGT+GGG | + | chr4.4:31682523-31682542 | None:intergenic | 55.0% | |
| TCAGCGCTGCTCAGTTTCCT+TGG | - | chr4.4:31683158-31683177 | MS.gene08918:CDS | 55.0% | |
| TGCATTCGGAGGATCGGAGA+AGG | - | chr4.4:31682682-31682701 | MS.gene08918:CDS | 55.0% | |
| ! | CTGGCACGTTTTCCTTTCCG+AGG | + | chr4.4:31683715-31683734 | None:intergenic | 55.0% |
| ! | GAAACCTAAGGTGACGGTGG+CGG | - | chr4.4:31682881-31682900 | MS.gene08918:CDS | 55.0% |
| ! | GACCTTTACCGTGCTTGCTG+TGG | - | chr4.4:31686967-31686986 | MS.gene08918:CDS | 55.0% |
| ! | GTCGCTTGAGTTGCATTCGG+AGG | - | chr4.4:31682671-31682690 | MS.gene08918:CDS | 55.0% |
| !! | CCCTAAAGCACGGGCTGTTT+TGG | - | chr4.4:31685898-31685917 | MS.gene08918:intron | 55.0% |
| AAGGAAGCTAACGGCGTCGC+CGG | - | chr4.4:31682603-31682622 | MS.gene08918:CDS | 60.0% | |
| AGATTCGGCGGTGTGGGAGA+TGG | + | chr4.4:31682517-31682536 | None:intergenic | 60.0% | |
| CTGAGAGAGGTGGCTCTTGG+CGG | - | chr4.4:31686144-31686163 | MS.gene08918:intron | 60.0% | |
| GACCTTCTGCCAGCCGTGAT+CGG | + | chr4.4:31682559-31682578 | None:intergenic | 60.0% | |
| GATCAATCGTCGGTCTCCCG+AGG | - | chr4.4:31684214-31684233 | MS.gene08918:intron | 60.0% | |
| GTGGATCGGTCAGGGGAGAA+TGG | - | chr4.4:31682816-31682835 | MS.gene08918:intron | 60.0% | |
| GTGTGGGAGATGGATCCGGA+GGG | + | chr4.4:31682507-31682526 | None:intergenic | 60.0% | |
| TGTGGGAGATGGATCCGGAG+GGG | + | chr4.4:31682506-31682525 | None:intergenic | 60.0% | |
| ! | GGTAGGTGTTCAGCTGGCTC+TGG | - | chr4.4:31686018-31686037 | MS.gene08918:intron | 60.0% |
| !! | AACAGCCCGTGCTTTAGGGG+TGG | + | chr4.4:31685897-31685916 | None:intergenic | 60.0% |
| !! | ACCGTGCTTGCTGTGGCTGT+TGG | - | chr4.4:31686974-31686993 | MS.gene08918:CDS | 60.0% |
| !! | TCATCTCACGGCGCCGATCA+CGG | - | chr4.4:31682543-31682562 | MS.gene08918:CDS | 60.0% |
| GCTTCCGCCACCGTCACCTT+AGG | + | chr4.4:31682888-31682907 | None:intergenic | 65.0% | |
| GGCGGTGTGGGAGATGGATC+CGG | + | chr4.4:31682511-31682530 | None:intergenic | 65.0% | |
| GGTGTGGGAGATGGATCCGG+AGG | + | chr4.4:31682508-31682527 | None:intergenic | 65.0% | |
| GTGATCGGCGCCGTGAGATG+AGG | + | chr4.4:31682544-31682563 | None:intergenic | 65.0% | |
| GTGGCTCTTGGCGGTTCTCC+TGG | - | chr4.4:31686153-31686172 | MS.gene08918:intron | 65.0% | |
| GTGGGAGATGGATCCGGAGG+GGG | + | chr4.4:31682505-31682524 | None:intergenic | 65.0% | |
| TCTTGAGGCGAGGACTGCGG+CGG | - | chr4.4:31682710-31682729 | MS.gene08918:intron | 65.0% | |
| CGCCGATCACGGCTGGCAGA+AGG | - | chr4.4:31682554-31682573 | MS.gene08918:CDS | 70.0% | |
| GCTAACGGCGTCGCCGGTAC+CGG | - | chr4.4:31682609-31682628 | MS.gene08918:CDS | 70.0% | |
| TGAGGCGAGGACTGCGGCGG+AGG | - | chr4.4:31682713-31682732 | MS.gene08918:intron | 75.0% | |
| !! | CTCACGGCGCCGATCACGGC+TGG | - | chr4.4:31682547-31682566 | MS.gene08918:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 31682486 | 31687072 | 31682486 | ID=MS.gene08918 |
| chr4.4 | mRNA | 31682486 | 31687072 | 31682486 | ID=MS.gene08918.t1;Parent=MS.gene08918 |
| chr4.4 | exon | 31686599 | 31687072 | 31686599 | ID=MS.gene08918.t1.exon1;Parent=MS.gene08918.t1 |
| chr4.4 | CDS | 31686599 | 31687072 | 31686599 | ID=cds.MS.gene08918.t1;Parent=MS.gene08918.t1 |
| chr4.4 | exon | 31686336 | 31686473 | 31686336 | ID=MS.gene08918.t1.exon2;Parent=MS.gene08918.t1 |
| chr4.4 | CDS | 31686336 | 31686473 | 31686336 | ID=cds.MS.gene08918.t1;Parent=MS.gene08918.t1 |
| chr4.4 | exon | 31685206 | 31685394 | 31685206 | ID=MS.gene08918.t1.exon3;Parent=MS.gene08918.t1 |
| chr4.4 | CDS | 31685206 | 31685394 | 31685206 | ID=cds.MS.gene08918.t1;Parent=MS.gene08918.t1 |
| chr4.4 | exon | 31684021 | 31684158 | 31684021 | ID=MS.gene08918.t1.exon4;Parent=MS.gene08918.t1 |
| chr4.4 | CDS | 31684021 | 31684158 | 31684021 | ID=cds.MS.gene08918.t1;Parent=MS.gene08918.t1 |
| chr4.4 | exon | 31683762 | 31683880 | 31683762 | ID=MS.gene08918.t1.exon5;Parent=MS.gene08918.t1 |
| chr4.4 | CDS | 31683762 | 31683880 | 31683762 | ID=cds.MS.gene08918.t1;Parent=MS.gene08918.t1 |
| chr4.4 | exon | 31683540 | 31683672 | 31683540 | ID=MS.gene08918.t1.exon6;Parent=MS.gene08918.t1 |
| chr4.4 | CDS | 31683540 | 31683672 | 31683540 | ID=cds.MS.gene08918.t1;Parent=MS.gene08918.t1 |
| chr4.4 | exon | 31683318 | 31683447 | 31683318 | ID=MS.gene08918.t1.exon7;Parent=MS.gene08918.t1 |
| chr4.4 | CDS | 31683318 | 31683447 | 31683318 | ID=cds.MS.gene08918.t1;Parent=MS.gene08918.t1 |
| chr4.4 | exon | 31683135 | 31683214 | 31683135 | ID=MS.gene08918.t1.exon8;Parent=MS.gene08918.t1 |
| chr4.4 | CDS | 31683135 | 31683214 | 31683135 | ID=cds.MS.gene08918.t1;Parent=MS.gene08918.t1 |
| chr4.4 | exon | 31682821 | 31682955 | 31682821 | ID=MS.gene08918.t1.exon9;Parent=MS.gene08918.t1 |
| chr4.4 | CDS | 31682821 | 31682955 | 31682821 | ID=cds.MS.gene08918.t1;Parent=MS.gene08918.t1 |
| chr4.4 | exon | 31682486 | 31682713 | 31682486 | ID=MS.gene08918.t1.exon10;Parent=MS.gene08918.t1 |
| chr4.4 | CDS | 31682486 | 31682713 | 31682486 | ID=cds.MS.gene08918.t1;Parent=MS.gene08918.t1 |
| Gene Sequence |
| Protein sequence |
