Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21732.t1 | XP_003610878.1 | 97.3 | 371 | 10 | 0 | 1 | 371 | 1 | 371 | 6.30E-214 | 753.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21732.t1 | Q8GYB8 | 73.8 | 370 | 97 | 0 | 1 | 370 | 1 | 370 | 7.7e-168 | 591.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21732.t1 | G7K6J8 | 97.3 | 371 | 10 | 0 | 1 | 371 | 1 | 371 | 4.6e-214 | 753.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21732.t1 | MTR_5g008040 | 97.305 | 371 | 10 | 0 | 1 | 371 | 1 | 371 | 0.0 | 755 |
| MS.gene21732.t1 | MTR_5g006800 | 83.424 | 368 | 61 | 0 | 3 | 370 | 1 | 368 | 0.0 | 653 |
| MS.gene21732.t1 | MTR_5g006780 | 81.622 | 370 | 66 | 1 | 3 | 370 | 1 | 370 | 0.0 | 634 |
| MS.gene21732.t1 | MTR_5g006750 | 77.568 | 370 | 81 | 1 | 3 | 370 | 1 | 370 | 0.0 | 618 |
| MS.gene21732.t1 | MTR_5g006740 | 78.846 | 364 | 77 | 0 | 7 | 370 | 1 | 364 | 0.0 | 611 |
| MS.gene21732.t1 | MTR_5g006670 | 78.846 | 364 | 71 | 1 | 7 | 370 | 1 | 358 | 0.0 | 606 |
| MS.gene21732.t1 | MTR_5g006710 | 77.446 | 368 | 77 | 1 | 3 | 370 | 1 | 362 | 0.0 | 602 |
| MS.gene21732.t1 | MTR_5g006740 | 75.824 | 364 | 71 | 2 | 7 | 370 | 1 | 347 | 0.0 | 575 |
| MS.gene21732.t1 | MTR_5g006720 | 71.774 | 372 | 67 | 2 | 10 | 370 | 7 | 351 | 0.0 | 535 |
| MS.gene21732.t1 | MTR_3g115600 | 67.131 | 359 | 114 | 1 | 12 | 370 | 8 | 362 | 0.0 | 519 |
| MS.gene21732.t1 | MTR_4g125470 | 54.865 | 370 | 154 | 4 | 14 | 370 | 19 | 388 | 8.58e-142 | 408 |
| MS.gene21732.t1 | MTR_5g006730 | 73.276 | 116 | 31 | 0 | 3 | 118 | 1 | 116 | 1.59e-56 | 181 |
| MS.gene21732.t1 | MTR_3g096570 | 75.676 | 74 | 15 | 1 | 177 | 250 | 8 | 78 | 8.03e-31 | 118 |
| MS.gene21732.t1 | MTR_3g096562 | 62.366 | 93 | 32 | 1 | 158 | 250 | 153 | 242 | 3.09e-30 | 119 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21732.t1 | AT1G76690 | 73.784 | 370 | 97 | 0 | 1 | 370 | 1 | 370 | 0.0 | 592 |
| MS.gene21732.t1 | AT1G76680 | 73.538 | 359 | 95 | 0 | 12 | 370 | 10 | 368 | 0.0 | 569 |
| MS.gene21732.t1 | AT1G76680 | 68.750 | 384 | 95 | 1 | 12 | 370 | 10 | 393 | 0.0 | 557 |
| MS.gene21732.t1 | AT1G09400 | 68.485 | 330 | 98 | 1 | 20 | 349 | 1 | 324 | 1.46e-178 | 499 |
| MS.gene21732.t1 | AT1G09400 | 69.630 | 270 | 76 | 1 | 80 | 349 | 2 | 265 | 3.38e-146 | 414 |
| MS.gene21732.t1 | AT1G17990 | 71.264 | 261 | 70 | 2 | 8 | 268 | 3 | 258 | 7.63e-138 | 393 |
| MS.gene21732.t1 | AT1G18020 | 71.264 | 261 | 70 | 2 | 8 | 268 | 3 | 258 | 7.63e-138 | 393 |
| MS.gene21732.t1 | AT2G06050 | 51.323 | 378 | 159 | 5 | 14 | 370 | 12 | 385 | 1.32e-135 | 392 |
| MS.gene21732.t1 | AT2G06050 | 51.323 | 378 | 159 | 5 | 14 | 370 | 12 | 385 | 1.32e-135 | 392 |
| MS.gene21732.t1 | AT2G06050 | 51.323 | 378 | 159 | 5 | 14 | 370 | 12 | 385 | 1.32e-135 | 392 |
| MS.gene21732.t1 | AT1G17990 | 68.199 | 261 | 70 | 3 | 8 | 268 | 3 | 250 | 3.35e-129 | 371 |
Find 100 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAAAGAATATGCCTTCTT+TGG | 0.261488 | 5.2:+2199363 | None:intergenic |
| TTATCGCCTTTCGCAGAATA+TGG | 0.269710 | 5.2:-2197615 | MS.gene21732:CDS |
| TATACAGACTACCCATTTCT+TGG | 0.283332 | 5.2:-2197237 | MS.gene21732:CDS |
| CTAAAGTCATTGACAATATC+AGG | 0.285268 | 5.2:+2197981 | None:intergenic |
| GCGAATCTCTTTGGCAAATC+TGG | 0.289004 | 5.2:+2197324 | None:intergenic |
| TGAAGAATTGGGGCTTTATA+TGG | 0.290560 | 5.2:-2197571 | MS.gene21732:CDS |
| AGGACAGATCTTGTTGCTTA+TGG | 0.306262 | 5.2:-2197366 | MS.gene21732:CDS |
| GAGAGTAATACAAAGTAGTA+TGG | 0.315383 | 5.2:+2201193 | None:intergenic |
| CTCCAAATGCCTGGTGTGTT+TGG | 0.320356 | 5.2:+2199433 | None:intergenic |
| GCTTGTTAGTAGAAGATATT+GGG | 0.320667 | 5.2:+2198084 | None:intergenic |
| TACACATCTGATCCGGTTCT+TGG | 0.324657 | 5.2:-2197261 | MS.gene21732:CDS |
| GGCTTGTTAGTAGAAGATAT+TGG | 0.325030 | 5.2:+2198083 | None:intergenic |
| GACTCCAATCCTGAAGAATT+GGG | 0.339508 | 5.2:-2197582 | MS.gene21732:CDS |
| GATATTGGGGCCTGCCCATT+TGG | 0.346646 | 5.2:+2198098 | None:intergenic |
| TCGATGCCATAGTTGAAAAT+AGG | 0.349377 | 5.2:-2197386 | MS.gene21732:CDS |
| AGACTCCAATCCTGAAGAAT+TGG | 0.353413 | 5.2:-2197583 | MS.gene21732:CDS |
| ACTATAGTTTAACCAAGAAA+TGG | 0.355225 | 5.2:+2197225 | None:intergenic |
| GGTGGAAGGGCTTCTAATTC+AGG | 0.355726 | 5.2:-2199328 | MS.gene21732:intron |
| TTAAAATTTCCCATCTTGTA+AGG | 0.359538 | 5.2:+2201379 | None:intergenic |
| CTCCTCTCAACAAGTATAAC+CGG | 0.365420 | 5.2:-2197293 | MS.gene21732:CDS |
| ATGCCATTGCTTCGAGTTTG+TGG | 0.368988 | 5.2:+2198053 | None:intergenic |
| GCATCGAGCGCGAATCTCTT+TGG | 0.386673 | 5.2:+2197315 | None:intergenic |
| TGACAATATCAGGAATTTCA+TGG | 0.396332 | 5.2:+2197991 | None:intergenic |
| ATCCAAACACACCAGGCATT+TGG | 0.397429 | 5.2:-2199435 | MS.gene21732:CDS |
| CCATTGAAGGCCTTTCTCAT+TGG | 0.402287 | 5.2:+2197450 | None:intergenic |
| CAGGAATTTCATGGGTCCTT+AGG | 0.403793 | 5.2:+2198000 | None:intergenic |
| AAACCGTTGTCGATTCGCTT+TGG | 0.409098 | 5.2:-2197691 | MS.gene21732:CDS |
| ATATAAAGCCCCAATTCTTC+AGG | 0.429449 | 5.2:+2197573 | None:intergenic |
| AATCAACCAACAAATGGAAA+TGG | 0.436673 | 5.2:-2201440 | None:intergenic |
| GTCAGATTTGGCATGGTGGA+AGG | 0.438961 | 5.2:-2199342 | MS.gene21732:CDS |
| TGAACAGGTTATCAACCAAA+TGG | 0.454311 | 5.2:-2198113 | MS.gene21732:intron |
| TTCCACCGTATTTATCAGTT+CGG | 0.457487 | 5.2:+2197721 | None:intergenic |
| GGAAATGGCTGGTGCATTAA+CGG | 0.458205 | 5.2:-2201425 | MS.gene21732:CDS |
| AAGCCCCAATTCTTCAGGAT+TGG | 0.460435 | 5.2:+2197578 | None:intergenic |
| TCATGGGTCCTTAGGCGCCT+TGG | 0.461695 | 5.2:+2198008 | None:intergenic |
| AACTATAAAAGTGCCATTGA+AGG | 0.470936 | 5.2:+2197437 | None:intergenic |
| TCTTCTTACTCCTTACAAGA+TGG | 0.470942 | 5.2:-2201389 | MS.gene21732:CDS |
| AGAGTAATACAAAGTAGTAT+GGG | 0.477134 | 5.2:+2201194 | None:intergenic |
| CTTTCATAAATTGCTCAAGT+AGG | 0.481142 | 5.2:+2197757 | None:intergenic |
| TTCGATGGAGTTGAGATCCA+TGG | 0.486878 | 5.2:-2197792 | MS.gene21732:CDS |
| GCATGAACAGCATCCACAAT+GGG | 0.488648 | 5.2:+2199385 | None:intergenic |
| TACAAAGTAGTATGGGGTTG+AGG | 0.493113 | 5.2:+2201201 | None:intergenic |
| GAGATAGGTGCAGAAAGAGT+TGG | 0.494347 | 5.2:-2197645 | MS.gene21732:CDS |
| AGTTGAATGTCTTCACAGCT+TGG | 0.498662 | 5.2:-2197475 | MS.gene21732:CDS |
| TCGATGGAGTTGAGATCCAT+GGG | 0.499246 | 5.2:-2197791 | MS.gene21732:CDS |
| CTATAGTTTAACCAAGAAAT+GGG | 0.499286 | 5.2:+2197226 | None:intergenic |
| GTAAGGAGTAAGAAGAGGAA+TGG | 0.500695 | 5.2:+2201396 | None:intergenic |
| CAGCTTGGTGCCAATGAGAA+AGG | 0.501105 | 5.2:-2197460 | MS.gene21732:CDS |
| CCAATGAGAAAGGCCTTCAA+TGG | 0.504166 | 5.2:-2197450 | MS.gene21732:CDS |
| TCAGATTTGGCATGGTGGAA+GGG | 0.507126 | 5.2:-2199341 | MS.gene21732:CDS |
| GAAAAGATCAAGTTGAAACT+TGG | 0.507676 | 5.2:-2199411 | MS.gene21732:CDS |
| TGGGTCCTTAGGCGCCTTGG+TGG | 0.508645 | 5.2:+2198011 | None:intergenic |
| CTTCTTACTCCTTACAAGAT+GGG | 0.510129 | 5.2:-2201388 | MS.gene21732:CDS |
| GCAAGGAATGCTATAGCAGC+TGG | 0.514833 | 5.2:-2197951 | MS.gene21732:intron |
| CTTCTCATAGCTGAATCTAC+TGG | 0.515752 | 5.2:-2201150 | MS.gene21732:CDS |
| TAAGGAGTAAGAAGAGGAAT+GGG | 0.516836 | 5.2:+2201397 | None:intergenic |
| GACAATATCAGGAATTTCAT+GGG | 0.520456 | 5.2:+2197992 | None:intergenic |
| GGTGTCTCTGAAACCTCTCT+AGG | 0.524407 | 5.2:-2201129 | MS.gene21732:CDS |
| CTACTTTGTATTACTCTCAA+AGG | 0.525931 | 5.2:-2201188 | MS.gene21732:CDS |
| TCACACCACCAAGGCGCCTA+AGG | 0.531884 | 5.2:-2198016 | MS.gene21732:CDS |
| GACGTTCTACACATCTGATC+CGG | 0.534351 | 5.2:-2197268 | MS.gene21732:CDS |
| TAGTCTGTATAACCAAGAAC+CGG | 0.536692 | 5.2:+2197249 | None:intergenic |
| GAAGCCGTTGTGAATGAGAT+AGG | 0.542870 | 5.2:-2197660 | MS.gene21732:CDS |
| GGAGGCTATTCGCGACAAGA+TGG | 0.544028 | 5.2:-2197411 | MS.gene21732:CDS |
| TAGAATCTCTGTCTTGTCAA+TGG | 0.545284 | 5.2:+2201234 | None:intergenic |
| GAACAGGTTATCAACCAAAT+GGG | 0.545439 | 5.2:-2198112 | MS.gene21732:intron |
| GCGCAAATTGCAGGTTTCGA+TGG | 0.545522 | 5.2:-2197807 | MS.gene21732:intron |
| AGGTTATCAACCAAATGGGC+AGG | 0.553384 | 5.2:-2198108 | MS.gene21732:CDS |
| ATCTTGTCGCGAATAGCCTC+CGG | 0.553417 | 5.2:+2197413 | None:intergenic |
| AACCAACAAATGGAAATGGC+TGG | 0.557584 | 5.2:-2201436 | None:intergenic |
| GAGGCTATTCGCGACAAGAT+GGG | 0.560123 | 5.2:-2197410 | MS.gene21732:CDS |
| TACTCTCAAAGGACTTCTCA+AGG | 0.570486 | 5.2:-2201177 | MS.gene21732:CDS |
| AATGACCGAACTGATAAATA+CGG | 0.575287 | 5.2:-2197726 | MS.gene21732:CDS |
| CTTCGAGTTTGTGGTTTGAG+TGG | 0.578701 | 5.2:+2198062 | None:intergenic |
| CAGATGTGTAGAACGTCTCC+CGG | 0.586149 | 5.2:+2197274 | None:intergenic |
| GTTGAGATCCATGGGGCTCA+CGG | 0.587095 | 5.2:-2197783 | MS.gene21732:CDS |
| TCCCGGTTATACTTGTTGAG+AGG | 0.589750 | 5.2:+2197291 | None:intergenic |
| CATTCTCCATATTCTGCGAA+AGG | 0.591746 | 5.2:+2197609 | None:intergenic |
| TTCGCAGAATATGGAGAATG+TGG | 0.594531 | 5.2:-2197606 | MS.gene21732:CDS |
| GTGTCTCTGAAACCTCTCTA+GGG | 0.596574 | 5.2:-2201128 | MS.gene21732:intron |
| TCCTCTCAACAAGTATAACC+GGG | 0.600285 | 5.2:-2197292 | MS.gene21732:CDS |
| GTAGGTAACCGTGAGCCCCA+TGG | 0.601191 | 5.2:+2197775 | None:intergenic |
| TTTCCAAAGCGAATCGACAA+CGG | 0.608562 | 5.2:+2197688 | None:intergenic |
| AAACCACAAACTCGAAGCAA+TGG | 0.609119 | 5.2:-2198056 | MS.gene21732:CDS |
| TATGGGGTTGAGGTGCATTG+TGG | 0.610097 | 5.2:+2201211 | None:intergenic |
| GATGCTGTTCATGCCAAAGA+AGG | 0.610419 | 5.2:-2199376 | MS.gene21732:CDS |
| CATGAAGATGTACCCTAGAG+AGG | 0.616138 | 5.2:+2201116 | None:intergenic |
| GGCATGAACAGCATCCACAA+TGG | 0.625777 | 5.2:+2199384 | None:intergenic |
| ACTCCAATCCTGAAGAATTG+GGG | 0.628524 | 5.2:-2197581 | MS.gene21732:CDS |
| TGCACCTATCTCATTCACAA+CGG | 0.632442 | 5.2:+2197656 | None:intergenic |
| ATGACTTTAGACTTGCTGCA+AGG | 0.639174 | 5.2:-2197968 | MS.gene21732:CDS |
| ATCTTGTAAGGAGTAAGAAG+AGG | 0.640316 | 5.2:+2201391 | None:intergenic |
| TGAAGGTATCCAAACACACC+AGG | 0.646546 | 5.2:-2199442 | MS.gene21732:intron |
| TGAAACTTGGAAACCCATTG+TGG | 0.652059 | 5.2:-2199398 | MS.gene21732:CDS |
| GACCGAACTGATAAATACGG+TGG | 0.660628 | 5.2:-2197723 | MS.gene21732:CDS |
| CTTGTTAGTAGAAGATATTG+GGG | 0.662691 | 5.2:+2198085 | None:intergenic |
| GAGTAATACAAAGTAGTATG+GGG | 0.673341 | 5.2:+2201195 | None:intergenic |
| CGATGGAGTTGAGATCCATG+GGG | 0.729853 | 5.2:-2197790 | MS.gene21732:CDS |
| TAGCTAAGTTCACACCACCA+AGG | 0.731237 | 5.2:-2198025 | MS.gene21732:CDS |
| TCTCAAAGGACTTCTCAAGG+AGG | 0.766624 | 5.2:-2201174 | MS.gene21732:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGATATAAAAAAAATGT+CGG | - | chr5.2:2199110-2199129 | MS.gene21732:intron | 10.0% |
| !! | TATAATTACAATAAATTAGA+CGG | - | chr5.2:2197654-2197673 | MS.gene21732:CDS | 10.0% |
| !! | TCATATTCATATTATAATAA+TGG | + | chr5.2:2199187-2199206 | None:intergenic | 10.0% |
| !!! | TAATTATTTTTTTAACTGTA+AGG | + | chr5.2:2198348-2198367 | None:intergenic | 10.0% |
| !! | AAAAAATATTAATGTGTCAA+TGG | - | chr5.2:2198702-2198721 | MS.gene21732:intron | 15.0% |
| !! | AAAAATATTAATGTGTCAAT+GGG | - | chr5.2:2198703-2198722 | MS.gene21732:intron | 15.0% |
| !! | AATAATATGGAAGATTATAT+AGG | + | chr5.2:2200526-2200545 | None:intergenic | 15.0% |
| !! | ATAGAATCTATAATGAAATA+TGG | + | chr5.2:2199773-2199792 | None:intergenic | 15.0% |
| !! | ATTGATATAAAAAAAATGTC+GGG | - | chr5.2:2199111-2199130 | MS.gene21732:intron | 15.0% |
| !! | TAGTTAATAATAACACATTT+GGG | - | chr5.2:2198127-2198146 | MS.gene21732:intron | 15.0% |
| !! | TTACTTAAAAAATCAGAATT+TGG | + | chr5.2:2200415-2200434 | None:intergenic | 15.0% |
| !! | TTAGTTAATAATAACACATT+TGG | - | chr5.2:2198126-2198145 | MS.gene21732:intron | 15.0% |
| !!! | AAGGATATAATTTTAATCTA+GGG | + | chr5.2:2198870-2198889 | None:intergenic | 15.0% |
| !!! | AGTAATTATTAGATTTTTCT+AGG | + | chr5.2:2197920-2197939 | None:intergenic | 15.0% |
| !!! | ATATTTCAACTTTATTTTAC+AGG | + | chr5.2:2198097-2198116 | None:intergenic | 15.0% |
| !!! | GAATTAACAATTCTAAATTT+TGG | + | chr5.2:2200746-2200765 | None:intergenic | 15.0% |
| !!! | TTAATTTTGTGTTTTAATCA+TGG | - | chr5.2:2197940-2197959 | MS.gene21732:intron | 15.0% |
| !! | AAATGTACATGATATATAGA+TGG | + | chr5.2:2197773-2197792 | None:intergenic | 20.0% |
| !! | AACTAACTTATAATTTGAGA+TGG | - | chr5.2:2198768-2198787 | MS.gene21732:intron | 20.0% |
| !! | ACATCATACAATAAATTAGA+CGG | - | chr5.2:2197611-2197630 | MS.gene21732:CDS | 20.0% |
| !! | ACTAAAATAACATATATGGA+GGG | - | chr5.2:2199454-2199473 | MS.gene21732:intron | 20.0% |
| !! | AGTTAATAATAACACATTTG+GGG | - | chr5.2:2198128-2198147 | MS.gene21732:intron | 20.0% |
| !! | CTTACATATTTGTAAATACA+TGG | - | chr5.2:2198211-2198230 | MS.gene21732:intron | 20.0% |
| !! | GATAATAGAAAAATGACATA+TGG | - | chr5.2:2200292-2200311 | MS.gene21732:intron | 20.0% |
| !! | TCAGACTAAAATAACATATA+TGG | - | chr5.2:2199450-2199469 | MS.gene21732:intron | 20.0% |
| !! | TGATTCATTTCATTCATATA+TGG | + | chr5.2:2200096-2200115 | None:intergenic | 20.0% |
| !! | TGTATGATGTCAAATATAAT+GGG | + | chr5.2:2197601-2197620 | None:intergenic | 20.0% |
| !! | TTCATTCATATATGGTAATA+CGG | + | chr5.2:2200088-2200107 | None:intergenic | 20.0% |
| !! | TTGTATGATGTCAAATATAA+TGG | + | chr5.2:2197602-2197621 | None:intergenic | 20.0% |
| !! | TTTAGCCAATTAATATAGTT+TGG | - | chr5.2:2199520-2199539 | MS.gene21732:intron | 20.0% |
| !!! | AAATATCTTGCTATTAACAA+AGG | - | chr5.2:2199076-2199095 | MS.gene21732:intron | 20.0% |
| !!! | AATTTCAAATTTTCAATGCT+TGG | - | chr5.2:2197365-2197384 | MS.gene21732:CDS | 20.0% |
| !!! | ACTCATTTTTATTTGCATTT+AGG | - | chr5.2:2199403-2199422 | MS.gene21732:CDS | 20.0% |
| !!! | AGGATATAATTTTAATCTAG+GGG | + | chr5.2:2198869-2198888 | None:intergenic | 20.0% |
| !!! | ATATTTGAAACCAATTTGTA+TGG | - | chr5.2:2197812-2197831 | MS.gene21732:intron | 20.0% |
| !!! | GAAATTTTAATCTATCTCAT+AGG | - | chr5.2:2197294-2197313 | MS.gene21732:CDS | 20.0% |
| !!! | GAAGGATATAATTTTAATCT+AGG | + | chr5.2:2198871-2198890 | None:intergenic | 20.0% |
| !!! | GATGATATTTATTCATGTTT+TGG | - | chr5.2:2198466-2198485 | MS.gene21732:intron | 20.0% |
| !!! | TCTTCTTAGTATTTTTCTTT+TGG | - | chr5.2:2198017-2198036 | MS.gene21732:CDS | 20.0% |
| !!! | TTAGAGATTTGATTTCTAAT+TGG | - | chr5.2:2198437-2198456 | MS.gene21732:intron | 20.0% |
| ! | ACATACTCAAAAAACAACAA+AGG | + | chr5.2:2200380-2200399 | None:intergenic | 25.0% |
| ! | AGAGTAATACAAAGTAGTAT+GGG | + | chr5.2:2197469-2197488 | None:intergenic | 25.0% |
| ! | ATAACCTGTTCAGAATAATA+TGG | + | chr5.2:2200539-2200558 | None:intergenic | 25.0% |
| ! | ATAGAAAAATGACATATGGT+AGG | - | chr5.2:2200296-2200315 | MS.gene21732:intron | 25.0% |
| ! | ATATGATATGATGTGAATGA+AGG | - | chr5.2:2199201-2199220 | MS.gene21732:intron | 25.0% |
| ! | ATCAAAGAATTAGACTATAC+TGG | + | chr5.2:2200192-2200211 | None:intergenic | 25.0% |
| ! | GACTAAAATAACATATATGG+AGG | - | chr5.2:2199453-2199472 | MS.gene21732:intron | 25.0% |
| ! | TAATAAATCATAAAACGTGC+CGG | - | chr5.2:2198673-2198692 | MS.gene21732:intron | 25.0% |
| ! | TATCAAAGTTGCTCATAATT+TGG | + | chr5.2:2198520-2198539 | None:intergenic | 25.0% |
| ! | TCAGATTCATTCATTTAAAC+TGG | + | chr5.2:2199591-2199610 | None:intergenic | 25.0% |
| ! | TCTTTAGACAGATATTTGTT+TGG | + | chr5.2:2198893-2198912 | None:intergenic | 25.0% |
| ! | TGCATCTAGATATATATAGT+TGG | + | chr5.2:2198946-2198965 | None:intergenic | 25.0% |
| ! | TTAAAATTTCCCATCTTGTA+AGG | + | chr5.2:2197284-2197303 | None:intergenic | 25.0% |
| ! | TTATATAGGTATAAATCGAC+AGG | + | chr5.2:2200512-2200531 | None:intergenic | 25.0% |
| !! | AGATTTGATTTCTAATTGGA+AGG | - | chr5.2:2198441-2198460 | MS.gene21732:intron | 25.0% |
| !! | GATTTGATTTCTAATTGGAA+GGG | - | chr5.2:2198442-2198461 | MS.gene21732:intron | 25.0% |
| !! | TCAGTAATAGTTTTCATTCT+TGG | + | chr5.2:2201162-2201181 | None:intergenic | 25.0% |
| !! | TCTTAGTATTTTTCTTTTGG+TGG | - | chr5.2:2198020-2198039 | MS.gene21732:CDS | 25.0% |
| !!! | AAAAAGACAATTAGCTTGTA+TGG | + | chr5.2:2198294-2198313 | None:intergenic | 25.0% |
| !!! | ATAGCTATTTTGATTTGATG+AGG | + | chr5.2:2199374-2199393 | None:intergenic | 25.0% |
| !!! | ATATAATTTTAATCTAGGGG+AGG | + | chr5.2:2198866-2198885 | None:intergenic | 25.0% |
| !!! | ATTTTTAGAGTAGGATTTCA+GGG | + | chr5.2:2199897-2199916 | None:intergenic | 25.0% |
| !!! | CAATATTTTTTACTGTCACA+TGG | - | chr5.2:2201131-2201150 | MS.gene21732:CDS | 25.0% |
| !!! | TATAATTTTAATCTAGGGGA+GGG | + | chr5.2:2198865-2198884 | None:intergenic | 25.0% |
| AAACCAATTTGTATGGCTAA+TGG | - | chr5.2:2197819-2197838 | MS.gene21732:intron | 30.0% | |
| AATGACCGAACTGATAAATA+CGG | - | chr5.2:2200934-2200953 | MS.gene21732:intron | 30.0% | |
| AATGATACCTGTCTTCATAA+AGG | - | chr5.2:2199914-2199933 | MS.gene21732:intron | 30.0% | |
| ACAAAAGAATATGCCTTCTT+TGG | + | chr5.2:2199300-2199319 | None:intergenic | 30.0% | |
| AGCCAATTAATATAGTTTGG+AGG | - | chr5.2:2199523-2199542 | MS.gene21732:intron | 30.0% | |
| AGTCAGTTAACACAATTTAG+AGG | - | chr5.2:2197708-2197727 | MS.gene21732:CDS | 30.0% | |
| CATATATGGTAATACGGTAT+GGG | + | chr5.2:2200082-2200101 | None:intergenic | 30.0% | |
| CTAAAGTCATTGACAATATC+AGG | + | chr5.2:2200682-2200701 | None:intergenic | 30.0% | |
| CTACTTTGTATTACTCTCAA+AGG | - | chr5.2:2197472-2197491 | MS.gene21732:CDS | 30.0% | |
| CTTGTTAGTAGAAGATATTG+GGG | + | chr5.2:2200578-2200597 | None:intergenic | 30.0% | |
| CTTTCATAAATTGCTCAAGT+AGG | + | chr5.2:2200906-2200925 | None:intergenic | 30.0% | |
| GACAATATCAGGAATTTCAT+GGG | + | chr5.2:2200671-2200690 | None:intergenic | 30.0% | |
| GAGAGTAATACAAAGTAGTA+TGG | + | chr5.2:2197470-2197489 | None:intergenic | 30.0% | |
| GAGTAATACAAAGTAGTATG+GGG | + | chr5.2:2197468-2197487 | None:intergenic | 30.0% | |
| GCCAATTAATATAGTTTGGA+GGG | - | chr5.2:2199524-2199543 | MS.gene21732:intron | 30.0% | |
| GTTTGCATTTCGACAAAAAA+AGG | + | chr5.2:2200247-2200266 | None:intergenic | 30.0% | |
| TACAGGTACCAAAATTTCAT+TGG | + | chr5.2:2198080-2198099 | None:intergenic | 30.0% | |
| TAGACAGATATTTGTTTGGA+AGG | + | chr5.2:2198889-2198908 | None:intergenic | 30.0% | |
| TATCCATTAGCCATACAAAT+TGG | + | chr5.2:2197825-2197844 | None:intergenic | 30.0% | |
| TCATATATGGTAATACGGTA+TGG | + | chr5.2:2200083-2200102 | None:intergenic | 30.0% | |
| TCCCTCCAAACTATATTAAT+TGG | + | chr5.2:2199528-2199547 | None:intergenic | 30.0% | |
| TCTTCCATATTATTCTGAAC+AGG | - | chr5.2:2200532-2200551 | MS.gene21732:intron | 30.0% | |
| TGACAATATCAGGAATTTCA+TGG | + | chr5.2:2200672-2200691 | None:intergenic | 30.0% | |
| ! | AACAACTCTAAAAATGGGAA+TGG | + | chr5.2:2197400-2197419 | None:intergenic | 30.0% |
| ! | ATCTGTCCTATTTTCAACTA+TGG | + | chr5.2:2201283-2201302 | None:intergenic | 30.0% |
| ! | GCATATTCTTTTGTCAGATT+TGG | - | chr5.2:2199306-2199325 | MS.gene21732:intron | 30.0% |
| ! | GCCAAAACAACTCTAAAAAT+GGG | + | chr5.2:2197405-2197424 | None:intergenic | 30.0% |
| ! | GCTTGTTAGTAGAAGATATT+GGG | + | chr5.2:2200579-2200598 | None:intergenic | 30.0% |
| ! | GTTCTTCTTTGTATTTTGCT+AGG | - | chr5.2:2198053-2198072 | MS.gene21732:CDS | 30.0% |
| ! | TGCCAAAACAACTCTAAAAA+TGG | + | chr5.2:2197406-2197425 | None:intergenic | 30.0% |
| ! | TTGCTCATAATTTGGAACAA+AGG | + | chr5.2:2198512-2198531 | None:intergenic | 30.0% |
| !! | ATAATTTTAATCTAGGGGAG+GGG | + | chr5.2:2198864-2198883 | None:intergenic | 30.0% |
| !! | GAAAAGATCAAGTTGAAACT+TGG | - | chr5.2:2199249-2199268 | MS.gene21732:intron | 30.0% |
| !! | TCGACAAAAAAAGGTTTTGA+AGG | + | chr5.2:2200238-2200257 | None:intergenic | 30.0% |
| !! | TCTTGCTATTAACAAAGGTT+AGG | - | chr5.2:2199081-2199100 | MS.gene21732:intron | 30.0% |
| !!! | ACAGGTATCATTTTTAGAGT+AGG | + | chr5.2:2199906-2199925 | None:intergenic | 30.0% |
| !!! | CATTTTTAGAGTAGGATTTC+AGG | + | chr5.2:2199898-2199917 | None:intergenic | 30.0% |
| !!! | GTTTTTTGAGTATGTGTCAA+GGG | - | chr5.2:2200385-2200404 | MS.gene21732:intron | 30.0% |
| !!! | TATTTTTTACTGTCACATGG+TGG | - | chr5.2:2201134-2201153 | MS.gene21732:CDS | 30.0% |
| !!! | TCCCATTTTTAGAGTTGTTT+TGG | - | chr5.2:2197401-2197420 | MS.gene21732:CDS | 30.0% |
| !!! | TGTTTTTTGAGTATGTGTCA+AGG | - | chr5.2:2200384-2200403 | MS.gene21732:intron | 30.0% |
| !!! | TTTTCTTTTGGTGGTGTAAA+CGG | - | chr5.2:2198029-2198048 | MS.gene21732:CDS | 30.0% |
| ACTTAAGAGTTAAGCCAGTA+AGG | + | chr5.2:2200129-2200148 | None:intergenic | 35.0% | |
| AGCAAACTGACATTCATCAA+TGG | + | chr5.2:2199651-2199670 | None:intergenic | 35.0% | |
| AGTAAGTAAAGTGTGTGTGA+AGG | + | chr5.2:2197336-2197355 | None:intergenic | 35.0% | |
| ATATAAAGCCCCAATTCTTC+AGG | + | chr5.2:2201090-2201109 | None:intergenic | 35.0% | |
| ATCAAATCCATTGACCTTAC+TGG | - | chr5.2:2200112-2200131 | MS.gene21732:intron | 35.0% | |
| ATCTTGTAAGGAGTAAGAAG+AGG | + | chr5.2:2197272-2197291 | None:intergenic | 35.0% | |
| ATGACATATGGTAGGATACT+AGG | - | chr5.2:2200304-2200323 | MS.gene21732:intron | 35.0% | |
| CTCTTAAAGAACAAACGTTC+TGG | + | chr5.2:2200790-2200809 | None:intergenic | 35.0% | |
| CTTCTTACTCCTTACAAGAT+GGG | - | chr5.2:2197272-2197291 | MS.gene21732:CDS | 35.0% | |
| GAACAGGTTATCAACCAAAT+GGG | - | chr5.2:2200548-2200567 | MS.gene21732:intron | 35.0% | |
| GTAATGCACTAACATACTTG+TGG | - | chr5.2:2200826-2200845 | MS.gene21732:intron | 35.0% | |
| TAAGGAGTAAGAAGAGGAAT+GGG | + | chr5.2:2197266-2197285 | None:intergenic | 35.0% | |
| TAGAATCTCTGTCTTGTCAA+TGG | + | chr5.2:2197429-2197448 | None:intergenic | 35.0% | |
| TAGTCTGTATAACCAAGAAC+CGG | + | chr5.2:2201414-2201433 | None:intergenic | 35.0% | |
| TATACAGACTACCCATTTCT+TGG | - | chr5.2:2201423-2201442 | MS.gene21732:CDS | 35.0% | |
| TCGATGCCATAGTTGAAAAT+AGG | - | chr5.2:2201274-2201293 | MS.gene21732:intron | 35.0% | |
| TCTTCTTACTCCTTACAAGA+TGG | - | chr5.2:2197271-2197290 | MS.gene21732:CDS | 35.0% | |
| TGAACAGGTTATCAACCAAA+TGG | - | chr5.2:2200547-2200566 | MS.gene21732:intron | 35.0% | |
| TGTCAGTCAGTTCAAGAAAT+TGG | - | chr5.2:2200333-2200352 | MS.gene21732:intron | 35.0% | |
| TTCCACCGTATTTATCAGTT+CGG | + | chr5.2:2200942-2200961 | None:intergenic | 35.0% | |
| TTCTAGTCCTTTATGAAGAC+AGG | + | chr5.2:2199924-2199943 | None:intergenic | 35.0% | |
| ! | ACTAGAAGCAATGTTTTCCT+GGG | - | chr5.2:2199937-2199956 | MS.gene21732:intron | 35.0% |
| ! | CTCTAAAAATGGGAATGGTT+AGG | + | chr5.2:2197395-2197414 | None:intergenic | 35.0% |
| ! | TGAAGAATTGGGGCTTTATA+TGG | - | chr5.2:2201089-2201108 | MS.gene21732:intron | 35.0% |
| ! | TGCTAGGACCAATGAAATTT+TGG | - | chr5.2:2198069-2198088 | MS.gene21732:CDS | 35.0% |
| ! | TTCTTTTGTCAGATTTGGCA+TGG | - | chr5.2:2199311-2199330 | MS.gene21732:intron | 35.0% |
| !! | ATAACCATTGATTTGACTCG+AGG | + | chr5.2:2198998-2199017 | None:intergenic | 35.0% |
| !! | GGCTTGTTAGTAGAAGATAT+TGG | + | chr5.2:2200580-2200599 | None:intergenic | 35.0% |
| !! | TAATTTTAATCTAGGGGAGG+GGG | + | chr5.2:2198863-2198882 | None:intergenic | 35.0% |
| AAACCACAAACTCGAAGCAA+TGG | - | chr5.2:2200604-2200623 | MS.gene21732:intron | 40.0% | |
| ACTCCAATCCTGAAGAATTG+GGG | - | chr5.2:2201079-2201098 | MS.gene21732:intron | 40.0% | |
| AGACTCCAATCCTGAAGAAT+TGG | - | chr5.2:2201077-2201096 | MS.gene21732:intron | 40.0% | |
| AGTTAAGCCAGTAAGGTCAA+TGG | + | chr5.2:2200122-2200141 | None:intergenic | 40.0% | |
| AGTTGAATGTCTTCACAGCT+TGG | - | chr5.2:2201185-2201204 | MS.gene21732:CDS | 40.0% | |
| ATCTCACGTGGTTAACACAT+CGG | - | chr5.2:2199721-2199740 | MS.gene21732:intron | 40.0% | |
| ATGCACTAACATACTTGTGG+TGG | - | chr5.2:2200829-2200848 | MS.gene21732:intron | 40.0% | |
| CATTCTCCATATTCTGCGAA+AGG | + | chr5.2:2201054-2201073 | None:intergenic | 40.0% | |
| CTCCTCTCAACAAGTATAAC+CGG | - | chr5.2:2201367-2201386 | MS.gene21732:CDS | 40.0% | |
| CTTCTCATAGCTGAATCTAC+TGG | - | chr5.2:2197510-2197529 | MS.gene21732:CDS | 40.0% | |
| CTTTCCTCGAGTCAAATCAA+TGG | - | chr5.2:2198991-2199010 | MS.gene21732:intron | 40.0% | |
| GACTCCAATCCTGAAGAATT+GGG | - | chr5.2:2201078-2201097 | MS.gene21732:intron | 40.0% | |
| GCAAACTATCCAACTCAAAC+AGG | + | chr5.2:2199979-2199998 | None:intergenic | 40.0% | |
| GTAAGGAGTAAGAAGAGGAA+TGG | + | chr5.2:2197267-2197286 | None:intergenic | 40.0% | |
| TACAAAGTAGTATGGGGTTG+AGG | + | chr5.2:2197462-2197481 | None:intergenic | 40.0% | |
| TACTCTCAAAGGACTTCTCA+AGG | - | chr5.2:2197483-2197502 | MS.gene21732:CDS | 40.0% | |
| TCCTCTCAACAAGTATAACC+GGG | - | chr5.2:2201368-2201387 | MS.gene21732:CDS | 40.0% | |
| TGAAACTTGGAAACCCATTG+TGG | - | chr5.2:2199262-2199281 | MS.gene21732:intron | 40.0% | |
| TGCACCTATCTCATTCACAA+CGG | + | chr5.2:2201007-2201026 | None:intergenic | 40.0% | |
| TTATCGCCTTTCGCAGAATA+TGG | - | chr5.2:2201045-2201064 | MS.gene21732:intron | 40.0% | |
| TTCGCAGAATATGGAGAATG+TGG | - | chr5.2:2201054-2201073 | MS.gene21732:intron | 40.0% | |
| TTTCCAAAGCGAATCGACAA+CGG | + | chr5.2:2200975-2200994 | None:intergenic | 40.0% | |
| ! | AGGACAGATCTTGTTGCTTA+TGG | - | chr5.2:2201294-2201313 | MS.gene21732:intron | 40.0% |
| ! | CAATGTTTTCCTGGGATGAA+GGG | - | chr5.2:2199945-2199964 | MS.gene21732:intron | 40.0% |
| ! | GACTAGAAGCAATGTTTTCC+TGG | - | chr5.2:2199936-2199955 | MS.gene21732:intron | 40.0% |
| ! | GATGAATGTCAGTTTGCTCT+CGG | - | chr5.2:2199653-2199672 | MS.gene21732:intron | 40.0% |
| ! | TGATCTTTTCTCCAAATGCC+TGG | + | chr5.2:2199239-2199258 | None:intergenic | 40.0% |
| ! | TTTTGTCAGATTTGGCATGG+TGG | - | chr5.2:2199314-2199333 | MS.gene21732:intron | 40.0% |
| !! | ATAGTTTGCTAAGCCATTGG+TGG | - | chr5.2:2199990-2200009 | MS.gene21732:intron | 40.0% |
| !! | ATGACTTTAGACTTGCTGCA+AGG | - | chr5.2:2200692-2200711 | MS.gene21732:intron | 40.0% |
| !! | TGGATAGTTTGCTAAGCCAT+TGG | - | chr5.2:2199987-2200006 | MS.gene21732:intron | 40.0% |
| AAATGCAAACGCGAAAGGCA+TGG | - | chr5.2:2200257-2200276 | MS.gene21732:intron | 45.0% | |
| AAGCCCCAATTCTTCAGGAT+TGG | + | chr5.2:2201085-2201104 | None:intergenic | 45.0% | |
| AGGAAATGACAGACAGAAGC+AGG | + | chr5.2:2200218-2200237 | None:intergenic | 45.0% | |
| AGGTTATCAACCAAATGGGC+AGG | - | chr5.2:2200552-2200571 | MS.gene21732:intron | 45.0% | |
| ATCCAAACACACCAGGCATT+TGG | - | chr5.2:2199225-2199244 | MS.gene21732:intron | 45.0% | |
| ATCCTCTCCTTTCTCATCCA+TGG | + | chr5.2:2200034-2200053 | None:intergenic | 45.0% | |
| CAGGAATTTCATGGGTCCTT+AGG | + | chr5.2:2200663-2200682 | None:intergenic | 45.0% | |
| CATGAAGATGTACCCTAGAG+AGG | + | chr5.2:2197547-2197566 | None:intergenic | 45.0% | |
| CATTCATGCTGTCAGCACAT+CGG | + | chr5.2:2199844-2199863 | None:intergenic | 45.0% | |
| CCATTGAAGGCCTTTCTCAT+TGG | + | chr5.2:2201213-2201232 | None:intergenic | 45.0% | |
| GAAATCATGACCGTCTGATC+TGG | - | chr5.2:2199806-2199825 | MS.gene21732:intron | 45.0% | |
| GAAGCCGTTGTGAATGAGAT+AGG | - | chr5.2:2201000-2201019 | MS.gene21732:intron | 45.0% | |
| GACCGAACTGATAAATACGG+TGG | - | chr5.2:2200937-2200956 | MS.gene21732:intron | 45.0% | |
| GACGTTCTACACATCTGATC+CGG | - | chr5.2:2201392-2201411 | MS.gene21732:CDS | 45.0% | |
| GAGATAGGTGCAGAAAGAGT+TGG | - | chr5.2:2201015-2201034 | MS.gene21732:intron | 45.0% | |
| GAGTAAGGACCTGTTTGAGT+TGG | - | chr5.2:2199967-2199986 | MS.gene21732:intron | 45.0% | |
| GATGCTGTTCATGCCAAAGA+AGG | - | chr5.2:2199284-2199303 | MS.gene21732:intron | 45.0% | |
| GCATGAACAGCATCCACAAT+GGG | + | chr5.2:2199278-2199297 | None:intergenic | 45.0% | |
| GCGAATCTCTTTGGCAAATC+TGG | + | chr5.2:2201339-2201358 | None:intergenic | 45.0% | |
| GCTGCAGTGTACTTGTCATT+TGG | + | chr5.2:2198324-2198343 | None:intergenic | 45.0% | |
| GGAAATGGCTGGTGCATTAA+CGG | - | chr5.2:2197235-2197254 | MS.gene21732:CDS | 45.0% | |
| TAAGCCATTGGTGGAAGCAA+GGG | - | chr5.2:2199999-2200018 | MS.gene21732:intron | 45.0% | |
| TACACATCTGATCCGGTTCT+TGG | - | chr5.2:2201399-2201418 | MS.gene21732:CDS | 45.0% | |
| TAGCTAAGTTCACACCACCA+AGG | - | chr5.2:2200635-2200654 | MS.gene21732:intron | 45.0% | |
| TCGATGGAGTTGAGATCCAT+GGG | - | chr5.2:2200869-2200888 | MS.gene21732:intron | 45.0% | |
| TCTCAAAGGACTTCTCAAGG+AGG | - | chr5.2:2197486-2197505 | MS.gene21732:CDS | 45.0% | |
| TGTCGAAATGCAAACGCGAA+AGG | - | chr5.2:2200252-2200271 | MS.gene21732:intron | 45.0% | |
| TTCGATGGAGTTGAGATCCA+TGG | - | chr5.2:2200868-2200887 | MS.gene21732:intron | 45.0% | |
| ! | ATGCCATTGCTTCGAGTTTG+TGG | + | chr5.2:2200610-2200629 | None:intergenic | 45.0% |
| ! | CGAATCGACAACGGTTTTCA+AGG | + | chr5.2:2200966-2200985 | None:intergenic | 45.0% |
| ! | CTTCGAGTTTGTGGTTTGAG+TGG | + | chr5.2:2200601-2200620 | None:intergenic | 45.0% |
| ! | GCAATGTTTTCCTGGGATGA+AGG | - | chr5.2:2199944-2199963 | MS.gene21732:intron | 45.0% |
| ! | TCAGATTTGGCATGGTGGAA+GGG | - | chr5.2:2199319-2199338 | MS.gene21732:intron | 45.0% |
| ! | TCCCGGTTATACTTGTTGAG+AGG | + | chr5.2:2201372-2201391 | None:intergenic | 45.0% |
| !! | AAACCGTTGTCGATTCGCTT+TGG | - | chr5.2:2200969-2200988 | MS.gene21732:intron | 45.0% |
| !! | GTGTCTCTGAAACCTCTCTA+GGG | - | chr5.2:2197532-2197551 | MS.gene21732:CDS | 45.0% |
| !! | TGAAGGTATCCAAACACACC+AGG | - | chr5.2:2199218-2199237 | MS.gene21732:intron | 45.0% |
| !! | AAAAAATATTGTATTTATTT+AGG | + | chr5.2:2201122-2201141 | None:intergenic | 5.0% |
| !! | AAAAATATTGTATTTATTTA+GGG | + | chr5.2:2201121-2201140 | None:intergenic | 5.0% |
| !!! | AAAAAATTGATATTTTTTAT+AGG | - | chr5.2:2199142-2199161 | MS.gene21732:intron | 5.0% |
| !!! | ATATTTTTAATCTTTATAAA+TGG | + | chr5.2:2198156-2198175 | None:intergenic | 5.0% |
| !!! | ATTAATATTTTTTTTTTTAC+CGG | + | chr5.2:2198695-2198714 | None:intergenic | 5.0% |
| !!! | ATTTTTTTTATATCAATTTT+TGG | + | chr5.2:2199108-2199127 | None:intergenic | 5.0% |
| ATCTTGTCGCGAATAGCCTC+CGG | + | chr5.2:2201250-2201269 | None:intergenic | 50.0% | |
| CAGATGTGTAGAACGTCTCC+CGG | + | chr5.2:2201389-2201408 | None:intergenic | 50.0% | |
| CGATGGAGTTGAGATCCATG+GGG | - | chr5.2:2200870-2200889 | MS.gene21732:intron | 50.0% | |
| CTAAGCCATTGGTGGAAGCA+AGG | - | chr5.2:2199998-2200017 | MS.gene21732:intron | 50.0% | |
| CTCCAAATGCCTGGTGTGTT+TGG | + | chr5.2:2199230-2199249 | None:intergenic | 50.0% | |
| GAGGCTATTCGCGACAAGAT+GGG | - | chr5.2:2201250-2201269 | MS.gene21732:CDS | 50.0% | |
| GCAAGGAATGCTATAGCAGC+TGG | - | chr5.2:2200709-2200728 | MS.gene21732:intron | 50.0% | |
| GCCATTGGAACCAGATCAGA+CGG | + | chr5.2:2199819-2199838 | None:intergenic | 50.0% | |
| GCGCAAATTGCAGGTTTCGA+TGG | - | chr5.2:2200853-2200872 | MS.gene21732:intron | 50.0% | |
| GCTTGCACAACAATCTCACG+TGG | - | chr5.2:2199709-2199728 | MS.gene21732:intron | 50.0% | |
| GGCATGAACAGCATCCACAA+TGG | + | chr5.2:2199279-2199298 | None:intergenic | 50.0% | |
| GGTGGAAGGGCTTCTAATTC+AGG | - | chr5.2:2199332-2199351 | MS.gene21732:CDS | 50.0% | |
| GGTTCTGCCATGGATGAGAA+AGG | - | chr5.2:2200024-2200043 | MS.gene21732:intron | 50.0% | |
| TATGGGGTTGAGGTGCATTG+TGG | + | chr5.2:2197452-2197471 | None:intergenic | 50.0% | |
| TCACGTGGTTAACACATCGG+TGG | - | chr5.2:2199724-2199743 | MS.gene21732:intron | 50.0% | |
| TGCCATGGATGAGAAAGGAG+AGG | - | chr5.2:2200029-2200048 | MS.gene21732:intron | 50.0% | |
| TTCCTGGGATGAAGGGAGTA+AGG | - | chr5.2:2199952-2199971 | MS.gene21732:intron | 50.0% | |
| TTTAATCTAGGGGAGGGGGA+AGG | + | chr5.2:2198859-2198878 | None:intergenic | 50.0% | |
| ! | ACCGTCTGATCTGGTTCCAA+TGG | - | chr5.2:2199815-2199834 | MS.gene21732:intron | 50.0% |
| ! | ATGTCAGTTTGCTCTCGGCA+AGG | - | chr5.2:2199658-2199677 | MS.gene21732:intron | 50.0% |
| ! | GTCAGATTTGGCATGGTGGA+AGG | - | chr5.2:2199318-2199337 | MS.gene21732:intron | 50.0% |
| !! | CAGCTTGGTGCCAATGAGAA+AGG | - | chr5.2:2201200-2201219 | MS.gene21732:CDS | 50.0% |
| !! | GGTGTCTCTGAAACCTCTCT+AGG | - | chr5.2:2197531-2197550 | MS.gene21732:CDS | 50.0% |
| CCATCCCTTGCTTCCACCAA+TGG | + | chr5.2:2200006-2200025 | None:intergenic | 55.0% | |
| CCATTGGTGGAAGCAAGGGA+TGG | - | chr5.2:2200003-2200022 | MS.gene21732:intron | 55.0% | |
| GATATTGGGGCCTGCCCATT+TGG | + | chr5.2:2200565-2200584 | None:intergenic | 55.0% | |
| GCATCGAGCGCGAATCTCTT+TGG | + | chr5.2:2201348-2201367 | None:intergenic | 55.0% | |
| GGAGGCTATTCGCGACAAGA+TGG | - | chr5.2:2201249-2201268 | MS.gene21732:CDS | 55.0% | |
| GTCAGCACATCGGTAGCCAT+TGG | + | chr5.2:2199834-2199853 | None:intergenic | 55.0% | |
| GTCCTTACTCCCTTCATCCC+AGG | + | chr5.2:2199957-2199976 | None:intergenic | 55.0% | |
| GTTGAGATCCATGGGGCTCA+CGG | - | chr5.2:2200877-2200896 | MS.gene21732:intron | 55.0% | |
| ! | AGCAAGGGATGGTTCTGCCA+TGG | - | chr5.2:2200014-2200033 | MS.gene21732:intron | 55.0% |
| ! | TGTGGTGGTGCGCAAATTGC+AGG | - | chr5.2:2200844-2200863 | MS.gene21732:intron | 55.0% |
| CTAGGGGAGGGGGAAGGAAA+TGG | + | chr5.2:2198853-2198872 | None:intergenic | 60.0% | |
| GGGAGGGGGAAGGAAATGGA+GGG | + | chr5.2:2198849-2198868 | None:intergenic | 60.0% | |
| GTAGGTAACCGTGAGCCCCA+TGG | + | chr5.2:2200888-2200907 | None:intergenic | 60.0% | |
| TCATGGGTCCTTAGGCGCCT+TGG | + | chr5.2:2200655-2200674 | None:intergenic | 60.0% | |
| ! | TCACACCACCAAGGCGCCTA+AGG | - | chr5.2:2200644-2200663 | MS.gene21732:intron | 60.0% |
| GGGGAGGGGGAAGGAAATGG+AGG | + | chr5.2:2198850-2198869 | None:intergenic | 65.0% | |
| TGGGTCCTTAGGCGCCTTGG+TGG | + | chr5.2:2200652-2200671 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 2197233 | 2201449 | 2197233 | ID=MS.gene21732 |
| chr5.2 | mRNA | 2197233 | 2201449 | 2197233 | ID=MS.gene21732.t1;Parent=MS.gene21732 |
| chr5.2 | exon | 2201367 | 2201449 | 2201367 | ID=MS.gene21732.t1.exon1;Parent=MS.gene21732.t1 |
| chr5.2 | CDS | 2201367 | 2201449 | 2201367 | ID=cds.MS.gene21732.t1;Parent=MS.gene21732.t1 |
| chr5.2 | exon | 2201129 | 2201269 | 2201129 | ID=MS.gene21732.t1.exon2;Parent=MS.gene21732.t1 |
| chr5.2 | CDS | 2201129 | 2201269 | 2201129 | ID=cds.MS.gene21732.t1;Parent=MS.gene21732.t1 |
| chr5.2 | exon | 2199329 | 2199459 | 2199329 | ID=MS.gene21732.t1.exon3;Parent=MS.gene21732.t1 |
| chr5.2 | CDS | 2199329 | 2199459 | 2199329 | ID=cds.MS.gene21732.t1;Parent=MS.gene21732.t1 |
| chr5.2 | exon | 2197952 | 2198128 | 2197952 | ID=MS.gene21732.t1.exon4;Parent=MS.gene21732.t1 |
| chr5.2 | CDS | 2197952 | 2198128 | 2197952 | ID=cds.MS.gene21732.t1;Parent=MS.gene21732.t1 |
| chr5.2 | exon | 2197233 | 2197816 | 2197233 | ID=MS.gene21732.t1.exon5;Parent=MS.gene21732.t1 |
| chr5.2 | CDS | 2197233 | 2197816 | 2197233 | ID=cds.MS.gene21732.t1;Parent=MS.gene21732.t1 |
| Gene Sequence |
| Protein sequence |
