AlfalfaGEDB | MS.gene97626

M. sativa cultivar XinJiangDaYe / MS.gene97626

KEGG: K05894
GO: GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0008150 GO:0008152 GO:0010181 GO:0016491 GO:0032553 GO:0036094 GO:0043167 GO:0043168 GO:0048037 GO:0050662 GO:0055114 GO:0097159 GO:0097367 GO:1901265 GO:1901363
PFAM: PF00724.23

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene97626.t1	XP_024639103.1	92.2	357	28	0	7	363	3	359	1.40E-194	688.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene97626.t1	B9FSC8	74.9	358	84	1	11	362	6	363	1.5e-163	577.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene97626.t1	G7K3R3	91.9	357	29	0	7	363	3	359	5.1e-194	686.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049281	MS.gene97626	0.803156	3.99E-49	-1.69E-46
MS.gene050363	MS.gene97626	0.823944	1.05E-53	-1.69E-46
MS.gene050883	MS.gene97626	0.81818	2.24E-52	-1.69E-46
MS.gene051946	MS.gene97626	0.800947	1.13E-48	-1.69E-46
MS.gene053549	MS.gene97626	0.804196	2.43E-49	-1.69E-46
MS.gene055550	MS.gene97626	0.805518	1.28E-49	-1.69E-46
MS.gene055551	MS.gene97626	0.810421	1.16E-50	-1.69E-46
MS.gene056311	MS.gene97626	0.802961	4.38E-49	-1.69E-46
MS.gene056408	MS.gene97626	0.812855	3.44E-51	-1.69E-46
MS.gene057956	MS.gene97626	0.913645	4.84E-84	-1.69E-46
MS.gene058628	MS.gene97626	0.80935	1.98E-50	-1.69E-46
MS.gene058629	MS.gene97626	0.809653	1.70E-50	-1.69E-46
MS.gene058630	MS.gene97626	0.824279	8.80E-54	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene001053	MS.gene97626	PPI
MS.gene97626	MS.gene016703	PPI
MS.gene40478	MS.gene97626	PPI
MS.gene97626	MS.gene40481	PPI
MS.gene97626	MS.gene024838	PPI
MS.gene97626	MS.gene40474	PPI
MS.gene21812	MS.gene97626	PPI
MS.gene97626	MS.gene039914	PPI
MS.gene82304	MS.gene97626	PPI
MS.gene001050	MS.gene97626	PPI
MS.gene40483	MS.gene97626	PPI
MS.gene97626	MS.gene40471	PPI
MS.gene019336	MS.gene97626	PPI
MS.gene97626	MS.gene79044	PPI
MS.gene97626	MS.gene024834	PPI
MS.gene024840	MS.gene97626	PPI
MS.gene012217	MS.gene97626	PPI
MS.gene024836	MS.gene97626	PPI
MS.gene21813	MS.gene97626	PPI
MS.gene97626	MS.gene21810	PPI
MS.gene97626	MS.gene21732	PPI
MS.gene97626	MS.gene024832	PPI
MS.gene97626	MS.gene001055	PPI
MS.gene97626	MS.gene24828	PPI
MS.gene97626	MS.gene46805	PPI
MS.gene97626	MS.gene21811	PPI
MS.gene40480	MS.gene97626	PPI
MS.gene97626	MS.gene024833	PPI
MS.gene001054	MS.gene97626	PPI
MS.gene001051	MS.gene97626	PPI
MS.gene97626	MS.gene024835	PPI
MS.gene97626	MS.gene21807	PPI
MS.gene024831	MS.gene97626	PPI
MS.gene97626	MS.gene28210	PPI
MS.gene50903	MS.gene97626	PPI
MS.gene057956	MS.gene97626	PPI
MS.gene97626	MS.gene21804	PPI
MS.gene001056	MS.gene97626	PPI
MS.gene40471	MS.gene97626	PPI
MS.gene97626	MS.gene23576	PPI
MS.gene051818	MS.gene97626	PPI
MS.gene21808	MS.gene97626	PPI
MS.gene97626	MS.gene001050	PPI
MS.gene26506	MS.gene97626	PPI
MS.gene058057	MS.gene97626	PPI
MS.gene97626	MS.gene60448	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene97626.t1	MTR_5g006670	91.877	357	29	0	7	363	3	359	0.0	689
MS.gene97626.t1	MTR_5g006710	89.807	363	37	0	1	363	1	363	0.0	687
MS.gene97626.t1	MTR_5g006780	84.906	371	48	3	1	363	1	371	0.0	646
MS.gene97626.t1	MTR_5g006800	82.385	369	59	1	1	363	1	369	0.0	636
MS.gene97626.t1	MTR_5g006740	81.267	363	62	1	7	363	3	365	0.0	621
MS.gene97626.t1	MTR_5g006750	79.784	371	67	2	1	363	1	371	0.0	618
MS.gene97626.t1	MTR_5g008040	78.261	368	74	1	1	362	3	370	0.0	608
MS.gene97626.t1	MTR_5g006740	77.135	363	60	3	7	363	3	348	0.0	575
MS.gene97626.t1	MTR_3g115600	69.041	365	109	2	1	363	1	363	0.0	536
MS.gene97626.t1	MTR_5g006720	71.733	375	62	3	6	363	5	352	0.0	535
MS.gene97626.t1	MTR_4g125470	54.054	370	151	3	12	362	19	388	3.50e-144	414
MS.gene97626.t1	MTR_5g006730	78.448	116	25	0	1	116	1	116	5.98e-63	197
MS.gene97626.t1	MTR_3g096570	78.873	71	15	0	169	239	8	78	8.55e-32	120
MS.gene97626.t1	MTR_3g096562	76.389	72	17	0	159	230	162	233	7.18e-30	118

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene97626.t1	AT1G76690	72.629	369	95	1	1	363	3	371	0.0	575
MS.gene97626.t1	AT1G76680	72.629	369	95	2	1	363	1	369	0.0	573
MS.gene97626.t1	AT1G76680	68.020	394	95	3	1	363	1	394	0.0	560
MS.gene97626.t1	AT1G09400	70.093	321	96	0	21	341	4	324	1.99e-179	501
MS.gene97626.t1	AT1G09400	70.833	264	77	0	78	341	2	265	7.17e-146	413
MS.gene97626.t1	AT2G06050	51.169	385	165	3	1	362	1	385	2.37e-140	404
MS.gene97626.t1	AT2G06050	51.169	385	165	3	1	362	1	385	2.37e-140	404
MS.gene97626.t1	AT2G06050	51.169	385	165	3	1	362	1	385	2.37e-140	404
MS.gene97626.t1	AT1G17990	69.767	258	75	2	5	260	2	258	2.34e-136	389
MS.gene97626.t1	AT1G18020	69.767	258	75	2	5	260	2	258	2.34e-136	389
MS.gene97626.t1	AT1G17990	66.667	258	75	3	5	260	2	250	1.02e-127	367

Find 86 sgRNAs with CRISPR-Local

Find 126 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCAAACCTCTTTGGCAAATC+TGG	0.210347	3.2:-12592633	None:intergenic
AAATGCATTGGGACTTTATA+TGG	0.214696	3.2:+12592386	MS.gene97626:CDS
CTCCTCTTAACAAGTATAAT+AGG	0.228308	3.2:+12592664	MS.gene97626:CDS
AGGGCAGATCTTGTAGTTTA+TGG	0.251067	3.2:+12592591	MS.gene97626:CDS
CTGAAGTCATTGACAATATC+AGG	0.283543	3.2:-12591954	None:intergenic
TAGTCTAATTCCAACTTTAT+CGG	0.320112	3.2:-12592322	None:intergenic
ATCCAGACAGCCCAGGTATA+TGG	0.329383	3.2:+12591341	MS.gene97626:CDS
GCATTAAGTGCAAACCTCTT+TGG	0.332483	3.2:-12592642	None:intergenic
TATAAGAAGACCACCTTTAG+AGG	0.341560	3.2:-12591281	None:intergenic
GGCTTTCAATGGCACTTTCA+TGG	0.346532	3.2:+12592518	MS.gene97626:CDS
ATATAAAGTCCCAATGCATT+TGG	0.354102	3.2:-12592384	None:intergenic
CTCATTGGCACAAGGCTGTA+AGG	0.367432	3.2:-12592492	None:intergenic
GAATCGTTGTCGATTTCCTT+TGG	0.368620	3.2:+12592266	MS.gene97626:CDS
TCCCTATTATACTTGTTAAG+AGG	0.369675	3.2:-12592666	None:intergenic
TCATCTGTCCCAAGCCTTCT+CGG	0.369862	3.2:-12591927	None:intergenic
CTTCTTACACCTTACAAGAT+AGG	0.370674	3.2:+12591056	MS.gene97626:CDS
CAATGGCACTTTCATGGTTG+CGG	0.371044	3.2:+12592524	MS.gene97626:CDS
TTGAATTTGCCTATCTTGTA+AGG	0.371737	3.2:-12591065	None:intergenic
GTCCATATACCTGGGCTGTC+TGG	0.372045	3.2:-12591343	None:intergenic
TCAATGCTATAGCTGAAAAC+AGG	0.375838	3.2:+12592571	MS.gene97626:CDS
TGATCCGGTTGTAGGTTATA+CGG	0.380846	3.2:+12592704	MS.gene97626:CDS
TACATTTCTGATCCGGTTGT+AGG	0.387959	3.2:+12592696	MS.gene97626:CDS
AATGGCACTTTCATGGTTGC+GGG	0.393208	3.2:+12592525	MS.gene97626:CDS
TCCTCTTAACAAGTATAATA+GGG	0.406224	3.2:+12592665	MS.gene97626:CDS
TTCTCGCTACCGAGAAGGCT+TGG	0.406585	3.2:+12591918	MS.gene97626:CDS
AAAGAATATTGTACTTATTG+AGG	0.409340	3.2:-12592416	None:intergenic
CCATTGAAAGCCTTTCTCAT+TGG	0.410004	3.2:-12592507	None:intergenic
AGGACCTTTGAGAGTAATAG+AGG	0.421466	3.2:-12591261	None:intergenic
GCATGAACAGCATCTACAAC+AGG	0.426710	3.2:-12591391	None:intergenic
AACATTCTACATTTCTGATC+CGG	0.427062	3.2:+12592689	MS.gene97626:CDS
CAGCCTTGTGCCAATGAGAA+AGG	0.431994	3.2:+12592497	MS.gene97626:CDS
GAAGCAGTTGTAAATGAGAT+AGG	0.432088	3.2:+12592297	MS.gene97626:CDS
GCAAATTCAATCTCTCTCAT+AGG	0.433596	3.2:+12591078	MS.gene97626:CDS
CTTTCTGCATATTCAGCAAA+TGG	0.438653	3.2:-12592348	None:intergenic
GATATCGGTGCTTGTCCATT+CGG	0.438814	3.2:-12591855	None:intergenic
GACTCTAATCCAAATGCATT+GGG	0.453689	3.2:+12592375	MS.gene97626:CDS
TGCTCTTTAGTCCATATACC+TGG	0.459561	3.2:-12591352	None:intergenic
AAGAATATTGTACTTATTGA+GGG	0.462924	3.2:-12592415	None:intergenic
TCTCGCTACCGAGAAGGCTT+GGG	0.476998	3.2:+12591919	MS.gene97626:CDS
GAGATAGGAGCCGATAAAGT+TGG	0.478784	3.2:+12592312	MS.gene97626:CDS
GTCGGATACACCAGTAGCTT+CGG	0.479603	3.2:-12591305	None:intergenic
CTCACTAGAATAAGATCCTA+TGG	0.486036	3.2:+12591214	MS.gene97626:CDS
CGAATCCAGATTTGCCAAAG+AGG	0.491902	3.2:+12592628	MS.gene97626:CDS
ATTGCTTGTGAGTGACTTGT+CGG	0.493116	3.2:-12591883	None:intergenic
CTTCTTATAGCCGAAGCTAC+TGG	0.505350	3.2:+12591295	MS.gene97626:CDS
AGACTCTAATCCAAATGCAT+TGG	0.510548	3.2:+12592374	MS.gene97626:CDS
TAAGGTGTAAGAAGAGGAAT+GGG	0.514396	3.2:-12591047	None:intergenic
TTGTCCTCTATTACTCTCAA+AGG	0.525613	3.2:+12591257	MS.gene97626:CDS
TCATTGGCACAAGGCTGTAA+GGG	0.525679	3.2:-12592491	None:intergenic
GCAAGAAATGCTATTGAAGC+TGG	0.528089	3.2:+12591984	MS.gene97626:CDS
GTAAGGTGTAAGAAGAGGAA+TGG	0.528759	3.2:-12591048	None:intergenic
TACTCTCAAAGGTCCTCTAA+AGG	0.530036	3.2:+12591268	MS.gene97626:CDS
GACTTGTCGGTAGAAGATAT+CGG	0.533594	3.2:-12591870	None:intergenic
GTCGAAATCCATGGAGCTCA+TGG	0.534699	3.2:+12592174	MS.gene97626:CDS
TTTGATGGTGTCGAAATCCA+TGG	0.539312	3.2:+12592165	MS.gene97626:CDS
GTAGATGCTGTTCATGCTAA+AGG	0.548123	3.2:+12591397	MS.gene97626:CDS
TGGATACCCTTGAGCTGTGT+CGG	0.553060	3.2:-12591323	None:intergenic
CCAATGAGAAAGGCTTTCAA+TGG	0.561406	3.2:+12592507	MS.gene97626:CDS
AAGCCTTTCTCATTGGCACA+AGG	0.563142	3.2:-12592500	None:intergenic
TAGAGGACAACATGTGGTTG+AGG	0.573654	3.2:-12591244	None:intergenic
GGTGTATCCGACACAGCTCA+AGG	0.574972	3.2:+12591316	MS.gene97626:CDS
TAGTCCGTATAACCTACAAC+CGG	0.576852	3.2:-12592708	None:intergenic
CAATATTCTTTACTGTCACA+TGG	0.576936	3.2:+12592428	MS.gene97626:CDS
AGCTTCAATAGCATTTCTTG+CGG	0.576970	3.2:-12591982	None:intergenic
GCTCTTTAGTCCATATACCT+GGG	0.578858	3.2:-12591351	None:intergenic
CAAGGGTATCCAGACAGCCC+AGG	0.584387	3.2:+12591334	MS.gene97626:CDS
GTAAGTAGCCATGAGCTCCA+TGG	0.586393	3.2:-12592182	None:intergenic
GGCACTTTCATGGTTGCGGG+AGG	0.587792	3.2:+12592528	MS.gene97626:CDS
AATGACAGAACAGATGAATA+CGG	0.588235	3.2:+12592231	MS.gene97626:CDS
GAAATCGACAACGATTCTCA+AGG	0.593087	3.2:-12592260	None:intergenic
GGAGGCTATGACAGACAAGA+CGG	0.604358	3.2:+12592546	MS.gene97626:CDS
TAGGATCTTATTCTAGTGAG+TGG	0.614903	3.2:-12591211	None:intergenic
GAGGCTATGACAGACAAGAC+GGG	0.616560	3.2:+12592547	MS.gene97626:CDS
ATCTTGTAAGGTGTAAGAAG+AGG	0.617684	3.2:-12591053	None:intergenic
CAATGCTATAGCTGAAAACA+GGG	0.617928	3.2:+12592572	MS.gene97626:CDS
TGGTTGAGGAACATTGCCAT+AGG	0.622865	3.2:-12591230	None:intergenic
ACTGCTTCAACAATTTCCAA+AGG	0.625347	3.2:-12592282	None:intergenic
AAATCGACAACGATTCTCAA+GGG	0.633730	3.2:-12592259	None:intergenic
TTTGCTGAATATGCAGAAAG+CGG	0.633878	3.2:+12592351	MS.gene97626:CDS
TCTCAAAGGTCCTCTAAAGG+TGG	0.638482	3.2:+12591271	MS.gene97626:CDS
CTAAAGAGCAAGTTGAGGCG+TGG	0.641191	3.2:+12591365	MS.gene97626:CDS
GTGTATCCGACACAGCTCAA+GGG	0.660265	3.2:+12591317	MS.gene97626:CDS
TATTCTTTACTGTCACATGG+TGG	0.684787	3.2:+12592431	MS.gene97626:CDS
ATGGACTAAAGAGCAAGTTG+AGG	0.687634	3.2:+12591360	MS.gene97626:CDS
GAGTAATAGAGGACAACATG+TGG	0.696474	3.2:-12591250	None:intergenic
GACAGAACAGATGAATACGG+TGG	0.702185	3.2:+12592234	MS.gene97626:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATTTGAAGATTAATTTAGT+TGG	+	chr3.2:12591496-12591515	MS.gene97626:intron	15.0%
!!	ATTAATCTTCAAATTATATG+AGG	-	chr3.2:12591491-12591510	None:intergenic	15.0%
!!	GTAGTAATACTAAAAAATAA+CGG	-	chr3.2:12591728-12591747	None:intergenic	15.0%
!!!	ATTGAAATTGAAAGTATAAT+AGG	-	chr3.2:12591106-12591125	None:intergenic	15.0%
!!	AAAGAATATTGTACTTATTG+AGG	-	chr3.2:12592419-12592438	None:intergenic	20.0%
!!	AAGAATATTGTACTTATTGA+GGG	-	chr3.2:12592418-12592437	None:intergenic	20.0%
!!	TTTAGTATTACTACTACTAA+GGG	+	chr3.2:12591734-12591753	MS.gene97626:intron	20.0%
!!!	ATACTAAAAAATAACGGATT+TGG	-	chr3.2:12591722-12591741	None:intergenic	20.0%
!!!	TACTAAAAAATAACGGATTT+GGG	-	chr3.2:12591721-12591740	None:intergenic	20.0%
!!!	TTTTAGTATTACTACTACTA+AGG	+	chr3.2:12591733-12591752	MS.gene97626:intron	20.0%
!	AAAACCTGTTGAGAATAAAA+TGG	-	chr3.2:12591832-12591851	None:intergenic	25.0%
!	CAAAACTATCCAATCAATAT+TGG	-	chr3.2:12591654-12591673	None:intergenic	25.0%
!	TAGTCTAATTCCAACTTTAT+CGG	-	chr3.2:12592325-12592344	None:intergenic	25.0%
!	TCCTCTTAACAAGTATAATA+GGG	+	chr3.2:12592665-12592684	MS.gene97626:CDS	25.0%
!	TTAGTATTACTACTACTAAG+GGG	+	chr3.2:12591735-12591754	MS.gene97626:intron	25.0%
!	TTGAAGATTAATTTAGTTGG+AGG	+	chr3.2:12591499-12591518	MS.gene97626:intron	25.0%
!!	TTGTTATTGTTGGATTTAGA+TGG	+	chr3.2:12591522-12591541	MS.gene97626:intron	25.0%
!!!	AGGACTATTTGTTGATTTAA+AGG	+	chr3.2:12592086-12592105	MS.gene97626:intron	25.0%
!!!	GGACTATTTGTTGATTTAAA+GGG	+	chr3.2:12592087-12592106	MS.gene97626:intron	25.0%
!!!	TACTGATATTTTTCAGAAAC+AGG	+	chr3.2:12592066-12592085	MS.gene97626:intron	25.0%
	AAATGCATTGGGACTTTATA+TGG	+	chr3.2:12592386-12592405	MS.gene97626:CDS	30.0%
	AAATTCTTGAGCTTGAAATC+CGG	+	chr3.2:12591623-12591642	MS.gene97626:intron	30.0%
	AACATTCTACATTTCTGATC+CGG	+	chr3.2:12592689-12592708	MS.gene97626:CDS	30.0%
	AATGACAGAACAGATGAATA+CGG	+	chr3.2:12592231-12592250	MS.gene97626:CDS	30.0%
	ACTATCCAATCAATATTGGA+CGG	-	chr3.2:12591650-12591669	None:intergenic	30.0%
	ATATAAAGTCCCAATGCATT+TGG	-	chr3.2:12592387-12592406	None:intergenic	30.0%
	CAATATTCTTTACTGTCACA+TGG	+	chr3.2:12592428-12592447	MS.gene97626:CDS	30.0%
	CTCCTCTTAACAAGTATAAT+AGG	+	chr3.2:12592664-12592683	MS.gene97626:CDS	30.0%
	TATTGAAGCTGGTAAATTTG+TGG	+	chr3.2:12591995-12592014	MS.gene97626:intron	30.0%
	TTGAATTTGCCTATCTTGTA+AGG	-	chr3.2:12591068-12591087	None:intergenic	30.0%
!	CTACATTCTTTTGTCAGATT+TGG	+	chr3.2:12591422-12591441	MS.gene97626:CDS	30.0%
!	GATTGAAGCACATTTCATTT+TGG	-	chr3.2:12592037-12592056	None:intergenic	30.0%
!	GTTGGAAGATTTTCAAATTC+AGG	+	chr3.2:12591448-12591467	MS.gene97626:CDS	30.0%
!	TCCCTATTATACTTGTTAAG+AGG	-	chr3.2:12592669-12592688	None:intergenic	30.0%
!!	TCAGAAGCTGATTTTATTCT+TGG	-	chr3.2:12592459-12592478	None:intergenic	30.0%
	AAATCGACAACGATTCTCAA+GGG	-	chr3.2:12592262-12592281	None:intergenic	35.0%
	ACTGCTTCAACAATTTCCAA+AGG	-	chr3.2:12592285-12592304	None:intergenic	35.0%
	AGACTCTAATCCAAATGCAT+TGG	+	chr3.2:12592374-12592393	MS.gene97626:CDS	35.0%
	AGCTTCAATAGCATTTCTTG+CGG	-	chr3.2:12591985-12592004	None:intergenic	35.0%
	ATCTTGTAAGGTGTAAGAAG+AGG	-	chr3.2:12591056-12591075	None:intergenic	35.0%
	ATTGTTGGATTTAGATGGTG+TGG	+	chr3.2:12591527-12591546	MS.gene97626:intron	35.0%
	CAATGCTATAGCTGAAAACA+GGG	+	chr3.2:12592572-12592591	MS.gene97626:CDS	35.0%
	CTCAATTTGATGCAAATTGC+AGG	+	chr3.2:12592141-12592160	MS.gene97626:intron	35.0%
	CTCACTAGAATAAGATCCTA+TGG	+	chr3.2:12591214-12591233	MS.gene97626:CDS	35.0%
	CTGAAGTCATTGACAATATC+AGG	-	chr3.2:12591957-12591976	None:intergenic	35.0%
	CTTCTTACACCTTACAAGAT+AGG	+	chr3.2:12591056-12591075	MS.gene97626:CDS	35.0%
	CTTTCTGCATATTCAGCAAA+TGG	-	chr3.2:12592351-12592370	None:intergenic	35.0%
	GAAGCAGTTGTAAATGAGAT+AGG	+	chr3.2:12592297-12592316	MS.gene97626:CDS	35.0%
	GACTCTAATCCAAATGCATT+GGG	+	chr3.2:12592375-12592394	MS.gene97626:CDS	35.0%
	GCAAATTCAATCTCTCTCAT+AGG	+	chr3.2:12591078-12591097	MS.gene97626:CDS	35.0%
	GGAGGTTAATTAGCAAAACA+AGG	-	chr3.2:12591169-12591188	None:intergenic	35.0%
	TAAGGTGTAAGAAGAGGAAT+GGG	-	chr3.2:12591050-12591069	None:intergenic	35.0%
	TAGGATCTTATTCTAGTGAG+TGG	-	chr3.2:12591214-12591233	None:intergenic	35.0%
	TATAAGAAGACCACCTTTAG+AGG	-	chr3.2:12591284-12591303	None:intergenic	35.0%
	TATTCTTTACTGTCACATGG+TGG	+	chr3.2:12592431-12592450	MS.gene97626:CDS	35.0%
	TCAATGCTATAGCTGAAAAC+AGG	+	chr3.2:12592571-12592590	MS.gene97626:CDS	35.0%
	TTGTCCTCTATTACTCTCAA+AGG	+	chr3.2:12591257-12591276	MS.gene97626:CDS	35.0%
	TTTGCTGAATATGCAGAAAG+CGG	+	chr3.2:12592351-12592370	MS.gene97626:CDS	35.0%
!	AAAACAACTCTGAAAATGGG+AGG	-	chr3.2:12591187-12591206	None:intergenic	35.0%
!	GCCAAAACAACTCTGAAAAT+GGG	-	chr3.2:12591190-12591209	None:intergenic	35.0%
!	GTGTCCATTTTATTCTCAAC+AGG	+	chr3.2:12591825-12591844	MS.gene97626:intron	35.0%
!	TAGTTGGAGGTTGTTATTGT+TGG	+	chr3.2:12591512-12591531	MS.gene97626:intron	35.0%
!	TCCCATTTTCAGAGTTGTTT+TGG	+	chr3.2:12591186-12591205	MS.gene97626:intron	35.0%
!	TGCCAAAACAACTCTGAAAA+TGG	-	chr3.2:12591191-12591210	None:intergenic	35.0%
!	TTTTGTCAGATTTGGCATGT+TGG	+	chr3.2:12591430-12591449	MS.gene97626:CDS	35.0%
!!	ATGCAAATTGCAGGTTTTGA+TGG	+	chr3.2:12592150-12592169	MS.gene97626:intron	35.0%
	AAAAATTCTCGCTACCGAGA+AGG	+	chr3.2:12591913-12591932	MS.gene97626:CDS	40.0%
	AGGGCAGATCTTGTAGTTTA+TGG	+	chr3.2:12592591-12592610	MS.gene97626:CDS	40.0%
	CCAATGAGAAAGGCTTTCAA+TGG	+	chr3.2:12592507-12592526	MS.gene97626:CDS	40.0%
	CCATTGAAAGCCTTTCTCAT+TGG	-	chr3.2:12592510-12592529	None:intergenic	40.0%
	GAAATCGACAACGATTCTCA+AGG	-	chr3.2:12592263-12592282	None:intergenic	40.0%
	GACTTGTCGGTAGAAGATAT+CGG	-	chr3.2:12591873-12591892	None:intergenic	40.0%
	GAGTAATAGAGGACAACATG+TGG	-	chr3.2:12591253-12591272	None:intergenic	40.0%
	GCAAGAAATGCTATTGAAGC+TGG	+	chr3.2:12591984-12592003	MS.gene97626:CDS	40.0%
	GCATTAAGTGCAAACCTCTT+TGG	-	chr3.2:12592645-12592664	None:intergenic	40.0%
	GCTCTTTAGTCCATATACCT+GGG	-	chr3.2:12591354-12591373	None:intergenic	40.0%
	GTAAGGTGTAAGAAGAGGAA+TGG	-	chr3.2:12591051-12591070	None:intergenic	40.0%
	GTAGATGCTGTTCATGCTAA+AGG	+	chr3.2:12591397-12591416	MS.gene97626:CDS	40.0%
	TACATTTCTGATCCGGTTGT+AGG	+	chr3.2:12592696-12592715	MS.gene97626:CDS	40.0%
	TACTCTCAAAGGTCCTCTAA+AGG	+	chr3.2:12591268-12591287	MS.gene97626:CDS	40.0%
	TAGTCCGTATAACCTACAAC+CGG	-	chr3.2:12592711-12592730	None:intergenic	40.0%
	TGATCCGGTTGTAGGTTATA+CGG	+	chr3.2:12592704-12592723	MS.gene97626:CDS	40.0%
	TGCTCTTTAGTCCATATACC+TGG	-	chr3.2:12591355-12591374	None:intergenic	40.0%
!	AGGACCTTTGAGAGTAATAG+AGG	-	chr3.2:12591264-12591283	None:intergenic	40.0%
!	ATGGACTAAAGAGCAAGTTG+AGG	+	chr3.2:12591360-12591379	MS.gene97626:CDS	40.0%
!	ATTGCTTGTGAGTGACTTGT+CGG	-	chr3.2:12591886-12591905	None:intergenic	40.0%
!!	GAATCGTTGTCGATTTCCTT+TGG	+	chr3.2:12592266-12592285	MS.gene97626:CDS	40.0%
!!	TTTGATGGTGTCGAAATCCA+TGG	+	chr3.2:12592165-12592184	MS.gene97626:CDS	40.0%
	AAGCCTTTCTCATTGGCACA+AGG	-	chr3.2:12592503-12592522	None:intergenic	45.0%
	AATGGCACTTTCATGGTTGC+GGG	+	chr3.2:12592525-12592544	MS.gene97626:CDS	45.0%
	CAATGGCACTTTCATGGTTG+CGG	+	chr3.2:12592524-12592543	MS.gene97626:CDS	45.0%
	CCAATCAATATTGGACGGTC+CGG	-	chr3.2:12591645-12591664	None:intergenic	45.0%
	CGAATCCAGATTTGCCAAAG+AGG	+	chr3.2:12592628-12592647	MS.gene97626:CDS	45.0%
	CTAGACAACCGATCTTGATG+TGG	-	chr3.2:12591572-12591591	None:intergenic	45.0%
	CTTCTTATAGCCGAAGCTAC+TGG	+	chr3.2:12591295-12591314	MS.gene97626:CDS	45.0%
	GACAGAACAGATGAATACGG+TGG	+	chr3.2:12592234-12592253	MS.gene97626:CDS	45.0%
	GAGATAGGAGCCGATAAAGT+TGG	+	chr3.2:12592312-12592331	MS.gene97626:CDS	45.0%
	GCAAACCTCTTTGGCAAATC+TGG	-	chr3.2:12592636-12592655	None:intergenic	45.0%
	GCAGTCAACCACATCAAGAT+CGG	+	chr3.2:12591561-12591580	MS.gene97626:intron	45.0%
	GCATGAACAGCATCTACAAC+AGG	-	chr3.2:12591394-12591413	None:intergenic	45.0%
	GGCTTTCAATGGCACTTTCA+TGG	+	chr3.2:12592518-12592537	MS.gene97626:CDS	45.0%
	TAGAGGACAACATGTGGTTG+AGG	-	chr3.2:12591247-12591266	None:intergenic	45.0%
	TCATTGGCACAAGGCTGTAA+GGG	-	chr3.2:12592494-12592513	None:intergenic	45.0%
	TGGTTGAGGAACATTGCCAT+AGG	-	chr3.2:12591233-12591252	None:intergenic	45.0%
!	GATATCGGTGCTTGTCCATT+CGG	-	chr3.2:12591858-12591877	None:intergenic	45.0%
!	TCAACAGGTTTTCAGCCGAA+TGG	+	chr3.2:12591840-12591859	MS.gene97626:intron	45.0%
!	TCTCAAAGGTCCTCTAAAGG+TGG	+	chr3.2:12591271-12591290	MS.gene97626:CDS	45.0%
	ATCCAGACAGCCCAGGTATA+TGG	+	chr3.2:12591341-12591360	MS.gene97626:CDS	50.0%
	CCGGACCGTCCAATATTGAT+TGG	+	chr3.2:12591642-12591661	MS.gene97626:intron	50.0%
	CTCATTGGCACAAGGCTGTA+AGG	-	chr3.2:12592495-12592514	None:intergenic	50.0%
	GAGGCTATGACAGACAAGAC+GGG	+	chr3.2:12592547-12592566	MS.gene97626:CDS	50.0%
	GGAGGCTATGACAGACAAGA+CGG	+	chr3.2:12592546-12592565	MS.gene97626:CDS	50.0%
	GTAAGTAGCCATGAGCTCCA+TGG	-	chr3.2:12592185-12592204	None:intergenic	50.0%
	GTCGAAATCCATGGAGCTCA+TGG	+	chr3.2:12592174-12592193	MS.gene97626:CDS	50.0%
	GTCGGATACACCAGTAGCTT+CGG	-	chr3.2:12591308-12591327	None:intergenic	50.0%
	GTGTATCCGACACAGCTCAA+GGG	+	chr3.2:12591317-12591336	MS.gene97626:CDS	50.0%
	TCATCTGTCCCAAGCCTTCT+CGG	-	chr3.2:12591930-12591949	None:intergenic	50.0%
	TGGATACCCTTGAGCTGTGT+CGG	-	chr3.2:12591326-12591345	None:intergenic	50.0%
!	CAGCCTTGTGCCAATGAGAA+AGG	+	chr3.2:12592497-12592516	MS.gene97626:CDS	50.0%
!	CTAAAGAGCAAGTTGAGGCG+TGG	+	chr3.2:12591365-12591384	MS.gene97626:CDS	50.0%
	GGTGTATCCGACACAGCTCA+AGG	+	chr3.2:12591316-12591335	MS.gene97626:CDS	55.0%
	GTCCATATACCTGGGCTGTC+TGG	-	chr3.2:12591346-12591365	None:intergenic	55.0%
	TCTCGCTACCGAGAAGGCTT+GGG	+	chr3.2:12591919-12591938	MS.gene97626:CDS	55.0%
	TTCTCGCTACCGAGAAGGCT+TGG	+	chr3.2:12591918-12591937	MS.gene97626:CDS	55.0%
	GGCACTTTCATGGTTGCGGG+AGG	+	chr3.2:12592528-12592547	MS.gene97626:CDS	60.0%
!!	CAAGGGTATCCAGACAGCCC+AGG	+	chr3.2:12591334-12591353	MS.gene97626:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.2	gene	12591023	12592746	12591023	ID=MS.gene97626
chr3.2	mRNA	12591023	12592746	12591023	ID=MS.gene97626.t1;Parent=MS.gene97626
chr3.2	exon	12591023	12591099	12591023	ID=MS.gene97626.t1.exon1;Parent=MS.gene97626.t1
chr3.2	CDS	12591023	12591099	12591023	ID=cds.MS.gene97626.t1;Parent=MS.gene97626.t1
chr3.2	exon	12591198	12591469	12591198	ID=MS.gene97626.t1.exon2;Parent=MS.gene97626.t1
chr3.2	CDS	12591198	12591469	12591198	ID=cds.MS.gene97626.t1;Parent=MS.gene97626.t1
chr3.2	exon	12591847	12592005	12591847	ID=MS.gene97626.t1.exon3;Parent=MS.gene97626.t1
chr3.2	CDS	12591847	12592005	12591847	ID=cds.MS.gene97626.t1;Parent=MS.gene97626.t1
chr3.2	exon	12592163	12592746	12592163	ID=MS.gene97626.t1.exon4;Parent=MS.gene97626.t1
chr3.2	CDS	12592163	12592746	12592163	ID=cds.MS.gene97626.t1;Parent=MS.gene97626.t1

Gene Sequence

>MS.gene97626

ATGGAAGCTGCTAAAACTGCTGATCCCATTCCTCTTCTTACACCTTACAAGATAGGCAAATTCAATCTCTCTCATAGGTACCTATTATACTTTCAATTTCAATGTTATGTTTATTTCAATTTCAATTTCAATATCAATGCTTACCTTGTTTTGCTAATTAACCTCCCATTTTCAGAGTTGTTTTGGCACCACTCACTAGAATAAGATCCTATGGCAATGTTCCTCAACCACATGTTGTCCTCTATTACTCTCAAAGGTCCTCTAAAGGTGGTCTTCTTATAGCCGAAGCTACTGGTGTATCCGACACAGCTCAAGGGTATCCAGACAGCCCAGGTATATGGACTAAAGAGCAAGTTGAGGCGTGGAAACCTGTTGTAGATGCTGTTCATGCTAAAGGTGCTACATTCTTTTGTCAGATTTGGCATGTTGGAAGATTTTCAAATTCAGGTATGTATTTATTTATTTCCTCATATAATTTGAAGATTAATTTAGTTGGAGGTTGTTATTGTTGGATTTAGATGGTGTGGTGTGCGTTCATGCAGTCAACCACATCAAGATCGGTTGTCTAGATTTCAATGCAAATTTTGACTTTTTAAATCTAAATTCTTGAGCTTGAAATCCGGACCGTCCAATATTGATTGGATAGTTTTGATGTGTCTGACTAAATGCAGTCACAACTCTGTGATAATATACAACCCAAATCCGTTATTTTTTAGTATTACTACTACTAAGGGGTGACAACTTTCTGATTTTTGAAGTAATATATATGCACACATATATACAAATAAAATACTTACTTTGTGTGTCCATTTTATTCTCAACAGGTTTTCAGCCGAATGGACAAGCACCGATATCTTCTACCGACAAGTCACTCACAAGCAATGATTTTGAAAAATTCTCGCTACCGAGAAGGCTTGGGACAGATGAAATTCCTGATATTGTCAATGACTTCAGACTCGCCGCAAGAAATGCTATTGAAGCTGGTAAATTTGTGGATCTTTACAAATTTATCCAAAATGAAATGTGCTTCAATCATAGTACAATACTGATATTTTTCAGAAACAGGACTATTTGTTGATTTAAAGGGCACACAGACATTTTGAAAATCAACTAACATGCTCAATTTGATGCAAATTGCAGGTTTTGATGGTGTCGAAATCCATGGAGCTCATGGCTACTTACTTGAACAATTCATGAAAGATAAAGTGAATGACAGAACAGATGAATACGGTGGATCCCTTGAGAATCGTTGTCGATTTCCTTTGGAAATTGTTGAAGCAGTTGTAAATGAGATAGGAGCCGATAAAGTTGGAATTAGACTATCACCATTTGCTGAATATGCAGAAAGCGGAGACTCTAATCCAAATGCATTGGGACTTTATATGGTTAATGCCCTCAATAAGTACAATATTCTTTACTGTCACATGGTGGAACCAAGAATAAAATCAGCTTCTGAAACGATTGAAAGCCCTTACAGCCTTGTGCCAATGAGAAAGGCTTTCAATGGCACTTTCATGGTTGCGGGAGGCTATGACAGACAAGACGGGATCAATGCTATAGCTGAAAACAGGGCAGATCTTGTAGTTTATGGTCGTTTGTTCTTAGCGAATCCAGATTTGCCAAAGAGGTTTGCACTTAATGCTCCTCTTAACAAGTATAATAGGGAAACATTCTACATTTCTGATCCGGTTGTAGGTTATACGGACTATCCATTTCTTGAATGA

Protein sequence

>MS.gene97626.t1

MEAAKTADPIPLLTPYKIGKFNLSHRVVLAPLTRIRSYGNVPQPHVVLYYSQRSSKGGLLIAEATGVSDTAQGYPDSPGIWTKEQVEAWKPVVDAVHAKGATFFCQIWHVGRFSNSGFQPNGQAPISSTDKSLTSNDFEKFSLPRRLGTDEIPDIVNDFRLAARNAIEAGFDGVEIHGAHGYLLEQFMKDKVNDRTDEYGGSLENRCRFPLEIVEAVVNEIGADKVGIRLSPFAEYAESGDSNPNALGLYMVNALNKYNILYCHMVEPRIKSASETIESPYSLVPMRKAFNGTFMVAGGYDRQDGINAIAENRADLVVYGRLFLANPDLPKRFALNAPLNKYNRETFYISDPVVGYTDYPFLE