AlfalfaGEDB | MS.gene50903

M. sativa cultivar XinJiangDaYe / MS.gene50903

KEGG: K05894
GO: GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0008150 GO:0008152 GO:0010181 GO:0016491 GO:0032553 GO:0036094 GO:0043167 GO:0043168 GO:0048037 GO:0050662 GO:0055114 GO:0097159 GO:0097367 GO:1901265 GO:1901363
PFAM: PF00724.23

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50903.t1	XP_024639103.1	92.2	357	28	0	7	363	3	359	1.90E-194	688.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50903.t1	B9FSC8	75.1	358	83	1	11	362	6	363	6.6e-164	578.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50903.t1	G7K3R3	91.9	357	29	0	7	363	3	359	6.7e-194	686.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene055551	MS.gene50903	0.803874	2.83E-49	-1.69E-46
MS.gene057956	MS.gene50903	0.914312	2.22E-84	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene024836	MS.gene50903	PPI
MS.gene50903	MS.gene051818	PPI
MS.gene50903	MS.gene40478	PPI
MS.gene50903	MS.gene21804	PPI
MS.gene50903	MS.gene019336	PPI
MS.gene50903	MS.gene058057	PPI
MS.gene50903	MS.gene26506	PPI
MS.gene50903	MS.gene001054	PPI
MS.gene50903	MS.gene23576	PPI
MS.gene50903	MS.gene28210	PPI
MS.gene40480	MS.gene50903	PPI
MS.gene001056	MS.gene50903	PPI
MS.gene001051	MS.gene50903	PPI
MS.gene50903	MS.gene001050	PPI
MS.gene50903	MS.gene60448	PPI
MS.gene50903	MS.gene40483	PPI
MS.gene024831	MS.gene50903	PPI
MS.gene50903	MS.gene016703	PPI
MS.gene50903	MS.gene40481	PPI
MS.gene50903	MS.gene012217	PPI
MS.gene50903	MS.gene001051	PPI
MS.gene50903	MS.gene024838	PPI
MS.gene50903	MS.gene40474	PPI
MS.gene50903	MS.gene039914	PPI
MS.gene50903	MS.gene40471	PPI
MS.gene50903	MS.gene001056	PPI
MS.gene50903	MS.gene057956	PPI
MS.gene50903	MS.gene024831	PPI
MS.gene50903	MS.gene79044	PPI
MS.gene50903	MS.gene024834	PPI
MS.gene50903	MS.gene82304	PPI
MS.gene50903	MS.gene001053	PPI
MS.gene50903	MS.gene21812	PPI
MS.gene50903	MS.gene97626	PPI
MS.gene50903	MS.gene21808	PPI
MS.gene50903	MS.gene21810	PPI
MS.gene50903	MS.gene21732	PPI
MS.gene50903	MS.gene024832	PPI
MS.gene50903	MS.gene001055	PPI
MS.gene50903	MS.gene024840	PPI
MS.gene50903	MS.gene21813	PPI
MS.gene50903	MS.gene24828	PPI
MS.gene50903	MS.gene46805	PPI
MS.gene058057	MS.gene50903	PPI
MS.gene50903	MS.gene21811	PPI
MS.gene21813	MS.gene50903	PPI
MS.gene50903	MS.gene024833	PPI
MS.gene001053	MS.gene50903	PPI
MS.gene50903	MS.gene40480	PPI
MS.gene50903	MS.gene024835	PPI
MS.gene50903	MS.gene21807	PPI
MS.gene50903	MS.gene024836	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50903.t1	MTR_5g006670	91.877	357	29	0	7	363	3	359	0.0	688
MS.gene50903.t1	MTR_5g006710	89.807	363	37	0	1	363	1	363	0.0	687
MS.gene50903.t1	MTR_5g006780	84.906	371	48	3	1	363	1	371	0.0	645
MS.gene50903.t1	MTR_5g006800	82.385	369	59	1	1	363	1	369	0.0	635
MS.gene50903.t1	MTR_5g006740	81.267	363	62	1	7	363	3	365	0.0	620
MS.gene50903.t1	MTR_5g006750	79.784	371	67	2	1	363	1	371	0.0	617
MS.gene50903.t1	MTR_5g008040	78.261	368	74	1	1	362	3	370	0.0	608
MS.gene50903.t1	MTR_5g006740	77.135	363	60	3	7	363	3	348	0.0	573
MS.gene50903.t1	MTR_3g115600	69.041	365	109	2	1	363	1	363	0.0	535
MS.gene50903.t1	MTR_5g006720	71.733	375	62	3	6	363	5	352	0.0	534
MS.gene50903.t1	MTR_4g125470	53.514	370	153	3	12	362	19	388	5.85e-143	411
MS.gene50903.t1	MTR_5g006730	78.448	116	25	0	1	116	1	116	9.22e-63	197
MS.gene50903.t1	MTR_3g096570	78.873	71	15	0	169	239	8	78	7.95e-32	121
MS.gene50903.t1	MTR_3g096562	69.136	81	25	0	159	239	162	242	6.76e-30	118

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50903.t1	AT1G76690	72.629	369	95	1	1	363	3	371	0.0	574
MS.gene50903.t1	AT1G76680	72.629	369	95	2	1	363	1	369	0.0	573
MS.gene50903.t1	AT1G76680	68.020	394	95	3	1	363	1	394	0.0	559
MS.gene50903.t1	AT1G09400	69.444	324	99	0	18	341	1	324	4.52e-179	499
MS.gene50903.t1	AT1G09400	70.455	264	78	0	78	341	2	265	7.37e-145	410
MS.gene50903.t1	AT2G06050	51.169	385	165	3	1	362	1	385	3.14e-140	404
MS.gene50903.t1	AT2G06050	51.169	385	165	3	1	362	1	385	3.14e-140	404
MS.gene50903.t1	AT2G06050	51.169	385	165	3	1	362	1	385	3.14e-140	404
MS.gene50903.t1	AT1G17990	69.767	258	75	2	5	260	2	258	5.30e-136	388
MS.gene50903.t1	AT1G18020	69.767	258	75	2	5	260	2	258	5.30e-136	388
MS.gene50903.t1	AT1G17990	66.667	258	75	3	5	260	2	250	2.61e-127	366

Find 88 sgRNAs with CRISPR-Local

Find 129 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCAAACCTCTTTGGCAAATC+TGG	0.210347	3.3:-14433907	None:intergenic
AAATGCATTGGGACTTTATA+TGG	0.214696	3.3:+14433660	MS.gene50903:CDS
CTCCTCTTAACAAGTATAAT+AGG	0.228308	3.3:+14433938	MS.gene50903:CDS
AGGGCAGATCTTGTAGTTTA+TGG	0.251067	3.3:+14433865	MS.gene50903:CDS
CTGAAGTCATTGACAATATC+AGG	0.283543	3.3:-14433228	None:intergenic
TAGTCTAATTCCAACTTTAT+CGG	0.320112	3.3:-14433596	None:intergenic
ATCCAGACAGCCCAGGTATA+TGG	0.329383	3.3:+14432615	MS.gene50903:CDS
GCATTAAGTGCAAACCTCTT+TGG	0.332483	3.3:-14433916	None:intergenic
TATAAGAAGACCACCTTTAG+AGG	0.341560	3.3:-14432555	None:intergenic
GGCTTTCAATGGCACTTTCA+TGG	0.346532	3.3:+14433792	MS.gene50903:CDS
ATATAAAGTCCCAATGCATT+TGG	0.354102	3.3:-14433658	None:intergenic
CTCATTGGCACAAGGCTGTA+AGG	0.367432	3.3:-14433766	None:intergenic
GAATCGTTGTCGATTTCCTT+TGG	0.368620	3.3:+14433540	MS.gene50903:CDS
TCCCTATTATACTTGTTAAG+AGG	0.369675	3.3:-14433940	None:intergenic
TCATCTGTCCCAAGCCTTCT+CGG	0.369862	3.3:-14433201	None:intergenic
CAATGGCACTTTCATGGTTG+CGG	0.371044	3.3:+14433798	MS.gene50903:CDS
GTCCATATACCTGGGCTGTC+TGG	0.372045	3.3:-14432617	None:intergenic
TCAATGCTATAGCTGAAAAC+AGG	0.375838	3.3:+14433845	MS.gene50903:CDS
TGATCCGGTTGTAGGTTATA+CGG	0.380846	3.3:+14433978	MS.gene50903:CDS
TACATTTCTGATCCGGTTGT+AGG	0.387959	3.3:+14433970	MS.gene50903:CDS
AATGGCACTTTCATGGTTGC+GGG	0.393208	3.3:+14433799	MS.gene50903:CDS
TTGAATTTGCCCATCTTGTA+AGG	0.401075	3.3:-14432333	None:intergenic
TCCTCTTAACAAGTATAATA+GGG	0.406224	3.3:+14433939	MS.gene50903:CDS
TTCTCGCTACCGAGAAGGCT+TGG	0.406585	3.3:+14433192	MS.gene50903:CDS
AAAGAATATTGTACTTATTG+AGG	0.409340	3.3:-14433690	None:intergenic
CCATTGAAAGCCTTTCTCAT+TGG	0.410004	3.3:-14433781	None:intergenic
AGGACCTTTGAGAGTAATAG+AGG	0.421466	3.3:-14432535	None:intergenic
GCAAATTCAATCTCTCTCAT+AGG	0.425449	3.3:+14432346	MS.gene50903:CDS
AACATTCTACATTTCTGATC+CGG	0.427062	3.3:+14433963	MS.gene50903:CDS
CAGCCTTGTGCCAATGAGAA+AGG	0.431994	3.3:+14433771	MS.gene50903:CDS
GAAGCAGTTGTAAATGAGAT+AGG	0.432088	3.3:+14433571	MS.gene50903:CDS
CTTTCTGCATATTCAGCAAA+TGG	0.438653	3.3:-14433622	None:intergenic
GATATCGGTGCTTGTCCATT+CGG	0.438814	3.3:-14433129	None:intergenic
GACTCTAATCCAAATGCATT+GGG	0.453689	3.3:+14433649	MS.gene50903:CDS
GCATGAACATCATCTACAAC+AGG	0.455694	3.3:-14432665	None:intergenic
TGCTCTTTAGTCCATATACC+TGG	0.459561	3.3:-14432626	None:intergenic
AAGAATATTGTACTTATTGA+GGG	0.462924	3.3:-14433689	None:intergenic
TCTCGCTACCGAGAAGGCTT+GGG	0.476998	3.3:+14433193	MS.gene50903:CDS
GAGATAGGAGCCGATAAAGT+TGG	0.478784	3.3:+14433586	MS.gene50903:CDS
GTCGGATACACCAGTAGCTT+CGG	0.479603	3.3:-14432579	None:intergenic
CTCACTAGAATAAGATCCTA+TGG	0.486036	3.3:+14432488	MS.gene50903:CDS
TCTTCTTACACCTTACAAGA+TGG	0.486533	3.3:+14432323	MS.gene50903:CDS
CGAATCCAGATTTGCCAAAG+AGG	0.491902	3.3:+14433902	MS.gene50903:CDS
ATTGCTTGTGAGTGACTTGT+CGG	0.493116	3.3:-14433157	None:intergenic
CTTCTTATAGCCGAAGCTAC+TGG	0.505350	3.3:+14432569	MS.gene50903:CDS
AGACTCTAATCCAAATGCAT+TGG	0.510548	3.3:+14433648	MS.gene50903:CDS
TAAGGTGTAAGAAGAGGAAT+GGG	0.514396	3.3:-14432315	None:intergenic
TTGTCCTCTATTACTCTCAA+AGG	0.525613	3.3:+14432531	MS.gene50903:CDS
TCATTGGCACAAGGCTGTAA+GGG	0.525679	3.3:-14433765	None:intergenic
GCAAGAAATGCTATTGAAGC+TGG	0.528089	3.3:+14433258	MS.gene50903:CDS
GTAAGGTGTAAGAAGAGGAA+TGG	0.528759	3.3:-14432316	None:intergenic
TACTCTCAAAGGTCCTCTAA+AGG	0.530036	3.3:+14432542	MS.gene50903:CDS
CTTTCATGAATTGTTCAAGT+AGG	0.530510	3.3:-14433474	None:intergenic
GACTTGTCGGTAGAAGATAT+CGG	0.533594	3.3:-14433144	None:intergenic
GTCGAAATCCATGGAGCTCA+TGG	0.534699	3.3:+14433448	MS.gene50903:CDS
TTTGATGGTGTCGAAATCCA+TGG	0.539312	3.3:+14433439	MS.gene50903:CDS
CTTCTTACACCTTACAAGAT+GGG	0.542433	3.3:+14432324	MS.gene50903:CDS
TGGATACCCTTGAGCTGTGT+CGG	0.553060	3.3:-14432597	None:intergenic
GTAGATGATGTTCATGCTAA+AGG	0.558274	3.3:+14432671	MS.gene50903:CDS
CCAATGAGAAAGGCTTTCAA+TGG	0.561406	3.3:+14433781	MS.gene50903:CDS
AAGCCTTTCTCATTGGCACA+AGG	0.563142	3.3:-14433774	None:intergenic
TAGAGGACAACATGTGGTTG+AGG	0.573654	3.3:-14432518	None:intergenic
GGTGTATCCGACACAGCTCA+AGG	0.574972	3.3:+14432590	MS.gene50903:CDS
TAGTCCGTATAACCTACAAC+CGG	0.576852	3.3:-14433982	None:intergenic
CAATATTCTTTACTGTCACA+TGG	0.576936	3.3:+14433702	MS.gene50903:CDS
AGCTTCAATAGCATTTCTTG+CGG	0.576970	3.3:-14433256	None:intergenic
GCTCTTTAGTCCATATACCT+GGG	0.578858	3.3:-14432625	None:intergenic
CAAGGGTATCCAGACAGCCC+AGG	0.584387	3.3:+14432608	MS.gene50903:CDS
GGCACTTTCATGGTTGCGGG+AGG	0.587792	3.3:+14433802	MS.gene50903:CDS
AATGACAGAACAGATGAATA+CGG	0.588235	3.3:+14433505	MS.gene50903:CDS
GAAATCGACAACGATTCTCA+AGG	0.593087	3.3:-14433534	None:intergenic
GTAGGTAGCCATGAGCTCCA+TGG	0.595976	3.3:-14433456	None:intergenic
GGAGGCTATGACAGACAAGA+CGG	0.604358	3.3:+14433820	MS.gene50903:CDS
TAGGATCTTATTCTAGTGAG+TGG	0.614903	3.3:-14432485	None:intergenic
GAGGCTATGACAGACAAGAC+GGG	0.616560	3.3:+14433821	MS.gene50903:CDS
CAATGCTATAGCTGAAAACA+GGG	0.617928	3.3:+14433846	MS.gene50903:CDS
ATCTTGTAAGGTGTAAGAAG+AGG	0.620167	3.3:-14432321	None:intergenic
TGGTTGAGGAACATTGCCAT+AGG	0.622865	3.3:-14432504	None:intergenic
ACTGCTTCAACAATTTCCAA+AGG	0.625347	3.3:-14433556	None:intergenic
AAATCGACAACGATTCTCAA+GGG	0.633730	3.3:-14433533	None:intergenic
TTTGCTGAATATGCAGAAAG+CGG	0.633878	3.3:+14433625	MS.gene50903:CDS
TCTCAAAGGTCCTCTAAAGG+TGG	0.638482	3.3:+14432545	MS.gene50903:CDS
CTAAAGAGCAAGTTGAGGCG+TGG	0.641191	3.3:+14432639	MS.gene50903:CDS
GTGTATCCGACACAGCTCAA+GGG	0.660265	3.3:+14432591	MS.gene50903:CDS
TATTCTTTACTGTCACATGG+TGG	0.684787	3.3:+14433705	MS.gene50903:CDS
ATGGACTAAAGAGCAAGTTG+AGG	0.687634	3.3:+14432634	MS.gene50903:CDS
GAGTAATAGAGGACAACATG+TGG	0.696474	3.3:-14432524	None:intergenic
GACAGAACAGATGAATACGG+TGG	0.702185	3.3:+14433508	MS.gene50903:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATAATCTTCAAATTATATG+AGG	-	chr3.3:14432765-14432784	None:intergenic	15.0%
!!	GTAGTAATACTAAAAAATAA+CGG	-	chr3.3:14433002-14433021	None:intergenic	15.0%
!!!	AATTTGAAGATTATTTTAGT+TGG	+	chr3.3:14432770-14432789	MS.gene50903:intron	15.0%
!!!	ATTGAAATTGAAAGTATAAT+AGG	-	chr3.3:14432374-14432393	None:intergenic	15.0%
!!	AAAGAATATTGTACTTATTG+AGG	-	chr3.3:14433693-14433712	None:intergenic	20.0%
!!	AAGAATATTGTACTTATTGA+GGG	-	chr3.3:14433692-14433711	None:intergenic	20.0%
!!	TTTAGTATTACTACTACTAA+GGG	+	chr3.3:14433008-14433027	MS.gene50903:intron	20.0%
!!!	ATACTAAAAAATAACGGATT+TGG	-	chr3.3:14432996-14433015	None:intergenic	20.0%
!!!	TACTAAAAAATAACGGATTT+GGG	-	chr3.3:14432995-14433014	None:intergenic	20.0%
!!!	TTTTAGTATTACTACTACTA+AGG	+	chr3.3:14433007-14433026	MS.gene50903:intron	20.0%
!	AAAACCTGTTGAGAATAAAA+TGG	-	chr3.3:14433106-14433125	None:intergenic	25.0%
!	CAAAACTATCCAATCAATAT+TGG	-	chr3.3:14432928-14432947	None:intergenic	25.0%
!	TAGTCTAATTCCAACTTTAT+CGG	-	chr3.3:14433599-14433618	None:intergenic	25.0%
!	TCCTCTTAACAAGTATAATA+GGG	+	chr3.3:14433939-14433958	MS.gene50903:CDS	25.0%
!	TTAGTATTACTACTACTAAG+GGG	+	chr3.3:14433009-14433028	MS.gene50903:intron	25.0%
!!	TTGTTATTGTTGGATTTAGA+TGG	+	chr3.3:14432796-14432815	MS.gene50903:intron	25.0%
!!!	AGGACTATTTGTTGATTTAA+AGG	+	chr3.3:14433360-14433379	MS.gene50903:intron	25.0%
!!!	GGACTATTTGTTGATTTAAA+GGG	+	chr3.3:14433361-14433380	MS.gene50903:intron	25.0%
!!!	TACTGATATTTTTCAGAAAC+AGG	+	chr3.3:14433340-14433359	MS.gene50903:intron	25.0%
!!!	TTGAAGATTATTTTAGTTGG+AGG	+	chr3.3:14432773-14432792	MS.gene50903:intron	25.0%
	AAATGCATTGGGACTTTATA+TGG	+	chr3.3:14433660-14433679	MS.gene50903:CDS	30.0%
	AAATTCTTGAGCTTGAAATC+CGG	+	chr3.3:14432897-14432916	MS.gene50903:intron	30.0%
	AACATTCTACATTTCTGATC+CGG	+	chr3.3:14433963-14433982	MS.gene50903:CDS	30.0%
	AATGACAGAACAGATGAATA+CGG	+	chr3.3:14433505-14433524	MS.gene50903:CDS	30.0%
	ACTATCCAATCAATATTGGA+CGG	-	chr3.3:14432924-14432943	None:intergenic	30.0%
	ATATAAAGTCCCAATGCATT+TGG	-	chr3.3:14433661-14433680	None:intergenic	30.0%
	CAATATTCTTTACTGTCACA+TGG	+	chr3.3:14433702-14433721	MS.gene50903:CDS	30.0%
	CTCCTCTTAACAAGTATAAT+AGG	+	chr3.3:14433938-14433957	MS.gene50903:CDS	30.0%
	CTTTCATGAATTGTTCAAGT+AGG	-	chr3.3:14433477-14433496	None:intergenic	30.0%
	TATTGAAGCTGGTAAATTTG+TGG	+	chr3.3:14433269-14433288	MS.gene50903:intron	30.0%
!	CTACATTCTTTTGTCAGATT+TGG	+	chr3.3:14432696-14432715	MS.gene50903:CDS	30.0%
!	GATTGAAGCACATTTCATTT+TGG	-	chr3.3:14433311-14433330	None:intergenic	30.0%
!	GTTGGAAGATTTTCAAATTC+AGG	+	chr3.3:14432722-14432741	MS.gene50903:CDS	30.0%
!	TCCCTATTATACTTGTTAAG+AGG	-	chr3.3:14433943-14433962	None:intergenic	30.0%
!!	TCAGAAGCTGATTTTATTCT+TGG	-	chr3.3:14433733-14433752	None:intergenic	30.0%
	AAATCGACAACGATTCTCAA+GGG	-	chr3.3:14433536-14433555	None:intergenic	35.0%
	ACTGCTTCAACAATTTCCAA+AGG	-	chr3.3:14433559-14433578	None:intergenic	35.0%
	AGACTCTAATCCAAATGCAT+TGG	+	chr3.3:14433648-14433667	MS.gene50903:CDS	35.0%
	AGCTTCAATAGCATTTCTTG+CGG	-	chr3.3:14433259-14433278	None:intergenic	35.0%
	ATCTTGTAAGGTGTAAGAAG+AGG	-	chr3.3:14432324-14432343	None:intergenic	35.0%
	ATTGTTGGATTTAGATGGTG+TGG	+	chr3.3:14432801-14432820	MS.gene50903:intron	35.0%
	CAATGCTATAGCTGAAAACA+GGG	+	chr3.3:14433846-14433865	MS.gene50903:CDS	35.0%
	CTCAATTTGATGCAAATTGC+AGG	+	chr3.3:14433415-14433434	MS.gene50903:intron	35.0%
	CTCACTAGAATAAGATCCTA+TGG	+	chr3.3:14432488-14432507	MS.gene50903:CDS	35.0%
	CTGAAGTCATTGACAATATC+AGG	-	chr3.3:14433231-14433250	None:intergenic	35.0%
	CTTCTTACACCTTACAAGAT+GGG	+	chr3.3:14432324-14432343	MS.gene50903:CDS	35.0%
	CTTTCTGCATATTCAGCAAA+TGG	-	chr3.3:14433625-14433644	None:intergenic	35.0%
	GAAGCAGTTGTAAATGAGAT+AGG	+	chr3.3:14433571-14433590	MS.gene50903:CDS	35.0%
	GACTCTAATCCAAATGCATT+GGG	+	chr3.3:14433649-14433668	MS.gene50903:CDS	35.0%
	GCAAATTCAATCTCTCTCAT+AGG	+	chr3.3:14432346-14432365	MS.gene50903:CDS	35.0%
	GGAGGTTAATTAGCAAAACA+AGG	-	chr3.3:14432443-14432462	None:intergenic	35.0%
	GTAGATGATGTTCATGCTAA+AGG	+	chr3.3:14432671-14432690	MS.gene50903:CDS	35.0%
	TAAGGTGTAAGAAGAGGAAT+GGG	-	chr3.3:14432318-14432337	None:intergenic	35.0%
	TAGCAAAACAAGGTAAGCAT+TGG	-	chr3.3:14432433-14432452	None:intergenic	35.0%
	TAGGATCTTATTCTAGTGAG+TGG	-	chr3.3:14432488-14432507	None:intergenic	35.0%
	TATAAGAAGACCACCTTTAG+AGG	-	chr3.3:14432558-14432577	None:intergenic	35.0%
	TATTCTTTACTGTCACATGG+TGG	+	chr3.3:14433705-14433724	MS.gene50903:CDS	35.0%
	TCAATGCTATAGCTGAAAAC+AGG	+	chr3.3:14433845-14433864	MS.gene50903:CDS	35.0%
	TCTTCTTACACCTTACAAGA+TGG	+	chr3.3:14432323-14432342	MS.gene50903:CDS	35.0%
	TTGAATTTGCCCATCTTGTA+AGG	-	chr3.3:14432336-14432355	None:intergenic	35.0%
	TTGTCCTCTATTACTCTCAA+AGG	+	chr3.3:14432531-14432550	MS.gene50903:CDS	35.0%
	TTTGCTGAATATGCAGAAAG+CGG	+	chr3.3:14433625-14433644	MS.gene50903:CDS	35.0%
!	AAAACAACTCTGAAAATGGG+AGG	-	chr3.3:14432461-14432480	None:intergenic	35.0%
!	GCCAAAACAACTCTGAAAAT+GGG	-	chr3.3:14432464-14432483	None:intergenic	35.0%
!	GTGTCCATTTTATTCTCAAC+AGG	+	chr3.3:14433099-14433118	MS.gene50903:intron	35.0%
!	TAGTTGGAGGTTGTTATTGT+TGG	+	chr3.3:14432786-14432805	MS.gene50903:intron	35.0%
!	TCCCATTTTCAGAGTTGTTT+TGG	+	chr3.3:14432460-14432479	MS.gene50903:intron	35.0%
!	TGCCAAAACAACTCTGAAAA+TGG	-	chr3.3:14432465-14432484	None:intergenic	35.0%
!	TTTTGTCAGATTTGGCATGT+TGG	+	chr3.3:14432704-14432723	MS.gene50903:CDS	35.0%
!!	ATGCAAATTGCAGGTTTTGA+TGG	+	chr3.3:14433424-14433443	MS.gene50903:intron	35.0%
	AAAAATTCTCGCTACCGAGA+AGG	+	chr3.3:14433187-14433206	MS.gene50903:CDS	40.0%
	AGGGCAGATCTTGTAGTTTA+TGG	+	chr3.3:14433865-14433884	MS.gene50903:CDS	40.0%
	CCAATGAGAAAGGCTTTCAA+TGG	+	chr3.3:14433781-14433800	MS.gene50903:CDS	40.0%
	CCATTGAAAGCCTTTCTCAT+TGG	-	chr3.3:14433784-14433803	None:intergenic	40.0%
	GAAATCGACAACGATTCTCA+AGG	-	chr3.3:14433537-14433556	None:intergenic	40.0%
	GACTTGTCGGTAGAAGATAT+CGG	-	chr3.3:14433147-14433166	None:intergenic	40.0%
	GAGTAATAGAGGACAACATG+TGG	-	chr3.3:14432527-14432546	None:intergenic	40.0%
	GCAAGAAATGCTATTGAAGC+TGG	+	chr3.3:14433258-14433277	MS.gene50903:CDS	40.0%
	GCATGAACATCATCTACAAC+AGG	-	chr3.3:14432668-14432687	None:intergenic	40.0%
	GCATTAAGTGCAAACCTCTT+TGG	-	chr3.3:14433919-14433938	None:intergenic	40.0%
	GCTCTTTAGTCCATATACCT+GGG	-	chr3.3:14432628-14432647	None:intergenic	40.0%
	GTAAGGTGTAAGAAGAGGAA+TGG	-	chr3.3:14432319-14432338	None:intergenic	40.0%
	TACATTTCTGATCCGGTTGT+AGG	+	chr3.3:14433970-14433989	MS.gene50903:CDS	40.0%
	TACTCTCAAAGGTCCTCTAA+AGG	+	chr3.3:14432542-14432561	MS.gene50903:CDS	40.0%
	TAGTCCGTATAACCTACAAC+CGG	-	chr3.3:14433985-14434004	None:intergenic	40.0%
	TGATCCGGTTGTAGGTTATA+CGG	+	chr3.3:14433978-14433997	MS.gene50903:CDS	40.0%
	TGCTCTTTAGTCCATATACC+TGG	-	chr3.3:14432629-14432648	None:intergenic	40.0%
!	AGGACCTTTGAGAGTAATAG+AGG	-	chr3.3:14432538-14432557	None:intergenic	40.0%
!	ATGGACTAAAGAGCAAGTTG+AGG	+	chr3.3:14432634-14432653	MS.gene50903:CDS	40.0%
!	ATTGCTTGTGAGTGACTTGT+CGG	-	chr3.3:14433160-14433179	None:intergenic	40.0%
!!	GAATCGTTGTCGATTTCCTT+TGG	+	chr3.3:14433540-14433559	MS.gene50903:CDS	40.0%
!!	TTTGATGGTGTCGAAATCCA+TGG	+	chr3.3:14433439-14433458	MS.gene50903:CDS	40.0%
	AAGCCTTTCTCATTGGCACA+AGG	-	chr3.3:14433777-14433796	None:intergenic	45.0%
	AATGGCACTTTCATGGTTGC+GGG	+	chr3.3:14433799-14433818	MS.gene50903:CDS	45.0%
	CAATGGCACTTTCATGGTTG+CGG	+	chr3.3:14433798-14433817	MS.gene50903:CDS	45.0%
	CCAATCAATATTGGACGGTC+CGG	-	chr3.3:14432919-14432938	None:intergenic	45.0%
	CGAATCCAGATTTGCCAAAG+AGG	+	chr3.3:14433902-14433921	MS.gene50903:CDS	45.0%
	CTAGACAACCGATCTTGATG+TGG	-	chr3.3:14432846-14432865	None:intergenic	45.0%
	CTTCTTATAGCCGAAGCTAC+TGG	+	chr3.3:14432569-14432588	MS.gene50903:CDS	45.0%
	GACAGAACAGATGAATACGG+TGG	+	chr3.3:14433508-14433527	MS.gene50903:CDS	45.0%
	GAGATAGGAGCCGATAAAGT+TGG	+	chr3.3:14433586-14433605	MS.gene50903:CDS	45.0%
	GCAAACCTCTTTGGCAAATC+TGG	-	chr3.3:14433910-14433929	None:intergenic	45.0%
	GCAGTCAACCACATCAAGAT+CGG	+	chr3.3:14432835-14432854	MS.gene50903:intron	45.0%
	GGCTTTCAATGGCACTTTCA+TGG	+	chr3.3:14433792-14433811	MS.gene50903:CDS	45.0%
	TAGAGGACAACATGTGGTTG+AGG	-	chr3.3:14432521-14432540	None:intergenic	45.0%
	TCATTGGCACAAGGCTGTAA+GGG	-	chr3.3:14433768-14433787	None:intergenic	45.0%
	TGGTTGAGGAACATTGCCAT+AGG	-	chr3.3:14432507-14432526	None:intergenic	45.0%
!	GATATCGGTGCTTGTCCATT+CGG	-	chr3.3:14433132-14433151	None:intergenic	45.0%
!	TCAACAGGTTTTCAGCCGAA+TGG	+	chr3.3:14433114-14433133	MS.gene50903:intron	45.0%
!	TCTCAAAGGTCCTCTAAAGG+TGG	+	chr3.3:14432545-14432564	MS.gene50903:CDS	45.0%
	ATCCAGACAGCCCAGGTATA+TGG	+	chr3.3:14432615-14432634	MS.gene50903:CDS	50.0%
	CCGGACCGTCCAATATTGAT+TGG	+	chr3.3:14432916-14432935	MS.gene50903:intron	50.0%
	CTCATTGGCACAAGGCTGTA+AGG	-	chr3.3:14433769-14433788	None:intergenic	50.0%
	GAGGCTATGACAGACAAGAC+GGG	+	chr3.3:14433821-14433840	MS.gene50903:CDS	50.0%
	GGAGGCTATGACAGACAAGA+CGG	+	chr3.3:14433820-14433839	MS.gene50903:CDS	50.0%
	GTCGAAATCCATGGAGCTCA+TGG	+	chr3.3:14433448-14433467	MS.gene50903:CDS	50.0%
	GTCGGATACACCAGTAGCTT+CGG	-	chr3.3:14432582-14432601	None:intergenic	50.0%
	GTGTATCCGACACAGCTCAA+GGG	+	chr3.3:14432591-14432610	MS.gene50903:CDS	50.0%
	TCATCTGTCCCAAGCCTTCT+CGG	-	chr3.3:14433204-14433223	None:intergenic	50.0%
	TGGATACCCTTGAGCTGTGT+CGG	-	chr3.3:14432600-14432619	None:intergenic	50.0%
!	CAGCCTTGTGCCAATGAGAA+AGG	+	chr3.3:14433771-14433790	MS.gene50903:CDS	50.0%
!	CTAAAGAGCAAGTTGAGGCG+TGG	+	chr3.3:14432639-14432658	MS.gene50903:CDS	50.0%
	GGTGTATCCGACACAGCTCA+AGG	+	chr3.3:14432590-14432609	MS.gene50903:CDS	55.0%
	GTAGGTAGCCATGAGCTCCA+TGG	-	chr3.3:14433459-14433478	None:intergenic	55.0%
	GTCCATATACCTGGGCTGTC+TGG	-	chr3.3:14432620-14432639	None:intergenic	55.0%
	TCTCGCTACCGAGAAGGCTT+GGG	+	chr3.3:14433193-14433212	MS.gene50903:CDS	55.0%
	TTCTCGCTACCGAGAAGGCT+TGG	+	chr3.3:14433192-14433211	MS.gene50903:CDS	55.0%
	GGCACTTTCATGGTTGCGGG+AGG	+	chr3.3:14433802-14433821	MS.gene50903:CDS	60.0%
!!	CAAGGGTATCCAGACAGCCC+AGG	+	chr3.3:14432608-14432627	MS.gene50903:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.3	gene	14432291	14434020	14432291	ID=MS.gene50903
chr3.3	mRNA	14432291	14434020	14432291	ID=MS.gene50903.t1;Parent=MS.gene50903
chr3.3	exon	14432291	14432367	14432291	ID=MS.gene50903.t1.exon1;Parent=MS.gene50903.t1
chr3.3	CDS	14432291	14432367	14432291	ID=cds.MS.gene50903.t1;Parent=MS.gene50903.t1
chr3.3	exon	14432472	14432743	14432472	ID=MS.gene50903.t1.exon2;Parent=MS.gene50903.t1
chr3.3	CDS	14432472	14432743	14432472	ID=cds.MS.gene50903.t1;Parent=MS.gene50903.t1
chr3.3	exon	14433121	14433279	14433121	ID=MS.gene50903.t1.exon3;Parent=MS.gene50903.t1
chr3.3	CDS	14433121	14433279	14433121	ID=cds.MS.gene50903.t1;Parent=MS.gene50903.t1
chr3.3	exon	14433437	14434020	14433437	ID=MS.gene50903.t1.exon4;Parent=MS.gene50903.t1
chr3.3	CDS	14433437	14434020	14433437	ID=cds.MS.gene50903.t1;Parent=MS.gene50903.t1

Gene Sequence

>MS.gene50903

ATGGAAGCTGCTAAAACTGCTGATCCCATTCCTCTTCTTACACCTTACAAGATGGGCAAATTCAATCTCTCTCATAGGTACCTATTATACTTTCAATTTCAATGTTATGTTTATTTCAATTTCAATTTCAATTTCAATACCAATGCTTACCTTGTTTTGCTAATTAACCTCCCATTTTCAGAGTTGTTTTGGCACCACTCACTAGAATAAGATCCTATGGCAATGTTCCTCAACCACATGTTGTCCTCTATTACTCTCAAAGGTCCTCTAAAGGTGGTCTTCTTATAGCCGAAGCTACTGGTGTATCCGACACAGCTCAAGGGTATCCAGACAGCCCAGGTATATGGACTAAAGAGCAAGTTGAGGCGTGGAAACCTGTTGTAGATGATGTTCATGCTAAAGGTGCTACATTCTTTTGTCAGATTTGGCATGTTGGAAGATTTTCAAATTCAGGTATGTATATATTTATTTCCTCATATAATTTGAAGATTATTTTAGTTGGAGGTTGTTATTGTTGGATTTAGATGGTGTGGTGTGCGTTCATGCAGTCAACCACATCAAGATCGGTTGTCTAGATTTCAATGCAAATTTTGACTTTTTAAATCTAAATTCTTGAGCTTGAAATCCGGACCGTCCAATATTGATTGGATAGTTTTGATGTGTCTGACTAAATGCAGTCACAACTCTGTGATAATATACAACCCAAATCCGTTATTTTTTAGTATTACTACTACTAAGGGGTGACAACTTTCTGATTTTTGAAGTAATATATATGCACACATATATACAAATAAAATACTTACTTTGTGTGTCCATTTTATTCTCAACAGGTTTTCAGCCGAATGGACAAGCACCGATATCTTCTACCGACAAGTCACTCACAAGCAATGATTTTGAAAAATTCTCGCTACCGAGAAGGCTTGGGACAGATGAAATTCCTGATATTGTCAATGACTTCAGACTCGCCGCAAGAAATGCTATTGAAGCTGGTAAATTTGTGGATCTTTACAAATTTATCCAAAATGAAATGTGCTTCAATCATAGTACAATACTGATATTTTTCAGAAACAGGACTATTTGTTGATTTAAAGGGCACACAGACATTTTGAAAATCAACTAACATGCTCAATTTGATGCAAATTGCAGGTTTTGATGGTGTCGAAATCCATGGAGCTCATGGCTACCTACTTGAACAATTCATGAAAGATAAAGTGAATGACAGAACAGATGAATACGGTGGATCCCTTGAGAATCGTTGTCGATTTCCTTTGGAAATTGTTGAAGCAGTTGTAAATGAGATAGGAGCCGATAAAGTTGGAATTAGACTATCACCATTTGCTGAATATGCAGAAAGCGGAGACTCTAATCCAAATGCATTGGGACTTTATATGGTTAATGCCCTCAATAAGTACAATATTCTTTACTGTCACATGGTGGAACCAAGAATAAAATCAGCTTCTGAAACGATTGAAAGCCCTTACAGCCTTGTGCCAATGAGAAAGGCTTTCAATGGCACTTTCATGGTTGCGGGAGGCTATGACAGACAAGACGGGATCAATGCTATAGCTGAAAACAGGGCAGATCTTGTAGTTTATGGTCGTTTGTTCTTAGCGAATCCAGATTTGCCAAAGAGGTTTGCACTTAATGCTCCTCTTAACAAGTATAATAGGGAAACATTCTACATTTCTGATCCGGTTGTAGGTTATACGGACTATCCATTTCTTGAATGA

Protein sequence

>MS.gene50903.t1

MEAAKTADPIPLLTPYKMGKFNLSHRVVLAPLTRIRSYGNVPQPHVVLYYSQRSSKGGLLIAEATGVSDTAQGYPDSPGIWTKEQVEAWKPVVDDVHAKGATFFCQIWHVGRFSNSGFQPNGQAPISSTDKSLTSNDFEKFSLPRRLGTDEIPDIVNDFRLAARNAIEAGFDGVEIHGAHGYLLEQFMKDKVNDRTDEYGGSLENRCRFPLEIVEAVVNEIGADKVGIRLSPFAEYAESGDSNPNALGLYMVNALNKYNILYCHMVEPRIKSASETIESPYSLVPMRKAFNGTFMVAGGYDRQDGINAIAENRADLVVYGRLFLANPDLPKRFALNAPLNKYNRETFYISDPVVGYTDYPFLE