Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22224.t1 | XP_013459604.1 | 86.1 | 266 | 9 | 1 | 1 | 238 | 117 | 382 | 1.30E-125 | 459.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22224.t1 | A7PZL3 | 48.8 | 260 | 102 | 3 | 5 | 234 | 137 | 395 | 3.3e-64 | 246.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22224.t1 | A0A072V631 | 86.1 | 266 | 9 | 1 | 1 | 238 | 117 | 382 | 9.7e-126 | 459.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene22224 | 0.820767 | 5.76E-53 | -1.69E-46 |
| MS.gene049351 | MS.gene22224 | 0.80398 | 2.69E-49 | -1.69E-46 |
| MS.gene049427 | MS.gene22224 | 0.804458 | 2.14E-49 | -1.69E-46 |
| MS.gene049614 | MS.gene22224 | 0.827027 | 1.96E-54 | -1.69E-46 |
| MS.gene049828 | MS.gene22224 | 0.853485 | 2.32E-61 | -1.69E-46 |
| MS.gene049907 | MS.gene22224 | 0.846436 | 2.17E-59 | -1.69E-46 |
| MS.gene050076 | MS.gene22224 | 0.800011 | 1.76E-48 | -1.69E-46 |
| MS.gene050301 | MS.gene22224 | 0.800239 | 1.58E-48 | -1.69E-46 |
| MS.gene050353 | MS.gene22224 | -0.82577 | 3.91E-54 | -1.69E-46 |
| MS.gene050432 | MS.gene22224 | 0.811811 | 5.81E-51 | -1.69E-46 |
| MS.gene050581 | MS.gene22224 | 0.840919 | 6.50E-58 | -1.69E-46 |
| MS.gene050767 | MS.gene22224 | 0.885613 | 6.99E-72 | -1.69E-46 |
| MS.gene050770 | MS.gene22224 | 0.887472 | 1.39E-72 | -1.69E-46 |
| MS.gene05101 | MS.gene22224 | 0.819566 | 1.09E-52 | -1.69E-46 |
| MS.gene051228 | MS.gene22224 | 0.81471 | 1.34E-51 | -1.69E-46 |
| MS.gene051255 | MS.gene22224 | 0.813377 | 2.64E-51 | -1.69E-46 |
| MS.gene051692 | MS.gene22224 | 0.807964 | 3.91E-50 | -1.69E-46 |
| MS.gene051877 | MS.gene22224 | 0.808245 | 3.41E-50 | -1.69E-46 |
| MS.gene052271 | MS.gene22224 | 0.846456 | 2.15E-59 | -1.69E-46 |
| MS.gene052287 | MS.gene22224 | 0.815139 | 1.08E-51 | -1.69E-46 |
| MS.gene052290 | MS.gene22224 | 0.825001 | 5.95E-54 | -1.69E-46 |
| MS.gene052326 | MS.gene22224 | 0.826469 | 2.67E-54 | -1.69E-46 |
| MS.gene052379 | MS.gene22224 | 0.834183 | 3.47E-56 | -1.69E-46 |
| MS.gene053009 | MS.gene22224 | 0.817903 | 2.59E-52 | -1.69E-46 |
| MS.gene053207 | MS.gene22224 | 0.800905 | 1.16E-48 | -1.69E-46 |
| MS.gene053322 | MS.gene22224 | 0.852442 | 4.60E-61 | -1.69E-46 |
| MS.gene053813 | MS.gene22224 | 0.821863 | 3.22E-53 | -1.69E-46 |
| MS.gene054376 | MS.gene22224 | 0.872682 | 2.64E-67 | -1.69E-46 |
| MS.gene054642 | MS.gene22224 | 0.80003 | 1.74E-48 | -1.69E-46 |
| MS.gene054802 | MS.gene22224 | 0.848545 | 5.72E-60 | -1.69E-46 |
| MS.gene054803 | MS.gene22224 | 0.846907 | 1.62E-59 | -1.69E-46 |
| MS.gene054804 | MS.gene22224 | 0.852103 | 5.75E-61 | -1.69E-46 |
| MS.gene055254 | MS.gene22224 | 0.837254 | 5.79E-57 | -1.69E-46 |
| MS.gene055277 | MS.gene22224 | 0.803514 | 3.36E-49 | -1.69E-46 |
| MS.gene055397 | MS.gene22224 | 0.819167 | 1.34E-52 | -1.69E-46 |
| MS.gene055499 | MS.gene22224 | 0.857216 | 1.90E-62 | -1.69E-46 |
| MS.gene055636 | MS.gene22224 | 0.83943 | 1.59E-57 | -1.69E-46 |
| MS.gene055638 | MS.gene22224 | 0.817213 | 3.70E-52 | -1.69E-46 |
| MS.gene055647 | MS.gene22224 | 0.857207 | 1.91E-62 | -1.69E-46 |
| MS.gene055722 | MS.gene22224 | 0.809333 | 1.99E-50 | -1.69E-46 |
| MS.gene055802 | MS.gene22224 | 0.806028 | 1.00E-49 | -1.69E-46 |
| MS.gene05592 | MS.gene22224 | 0.823738 | 1.18E-53 | -1.69E-46 |
| MS.gene055930 | MS.gene22224 | 0.800686 | 1.28E-48 | -1.69E-46 |
| MS.gene056410 | MS.gene22224 | 0.863086 | 3.20E-64 | -1.69E-46 |
| MS.gene056452 | MS.gene22224 | 0.804845 | 1.78E-49 | -1.69E-46 |
| MS.gene056611 | MS.gene22224 | 0.844602 | 6.83E-59 | -1.69E-46 |
| MS.gene056931 | MS.gene22224 | 0.827205 | 1.78E-54 | -1.69E-46 |
| MS.gene056933 | MS.gene22224 | 0.824615 | 7.33E-54 | -1.69E-46 |
| MS.gene056935 | MS.gene22224 | 0.819346 | 1.22E-52 | -1.69E-46 |
| MS.gene056942 | MS.gene22224 | 0.816784 | 4.63E-52 | -1.69E-46 |
| MS.gene057011 | MS.gene22224 | 0.814417 | 1.56E-51 | -1.69E-46 |
| MS.gene057129 | MS.gene22224 | 0.839832 | 1.25E-57 | -1.69E-46 |
| MS.gene057146 | MS.gene22224 | 0.813405 | 2.60E-51 | -1.69E-46 |
| MS.gene057285 | MS.gene22224 | 0.802103 | 6.58E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene22224 | 0.802827 | 4.66E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene22224 | 0.819542 | 1.10E-52 | -1.69E-46 |
| MS.gene05806 | MS.gene22224 | 0.811796 | 5.85E-51 | -1.69E-46 |
| MS.gene058293 | MS.gene22224 | 0.821546 | 3.81E-53 | -1.69E-46 |
| MS.gene058323 | MS.gene22224 | 0.808544 | 2.94E-50 | -1.69E-46 |
| MS.gene058459 | MS.gene22224 | 0.803659 | 3.14E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene22224 | 0.837693 | 4.47E-57 | -1.69E-46 |
| MS.gene058903 | MS.gene22224 | 0.830262 | 3.24E-55 | -1.69E-46 |
| MS.gene059029 | MS.gene22224 | 0.80692 | 6.51E-50 | -1.69E-46 |
| MS.gene059529 | MS.gene22224 | 0.805803 | 1.12E-49 | -1.69E-46 |
| MS.gene059530 | MS.gene22224 | 0.817205 | 3.72E-52 | -1.69E-46 |
| MS.gene059536 | MS.gene22224 | 0.829622 | 4.64E-55 | -1.69E-46 |
| MS.gene059676 | MS.gene22224 | 0.837939 | 3.87E-57 | -1.69E-46 |
| MS.gene059692 | MS.gene22224 | 0.801165 | 1.02E-48 | -1.69E-46 |
| MS.gene059695 | MS.gene22224 | 0.800896 | 1.16E-48 | -1.69E-46 |
| MS.gene059711 | MS.gene22224 | 0.847679 | 9.93E-60 | -1.69E-46 |
| MS.gene059960 | MS.gene22224 | 0.839008 | 2.05E-57 | -1.69E-46 |
| MS.gene059974 | MS.gene22224 | 0.827351 | 1.64E-54 | -1.69E-46 |
| MS.gene060005 | MS.gene22224 | 0.832737 | 7.97E-56 | -1.69E-46 |
| MS.gene060356 | MS.gene22224 | 0.85603 | 4.24E-62 | -1.69E-46 |
| MS.gene060559 | MS.gene22224 | 0.819981 | 8.73E-53 | -1.69E-46 |
| MS.gene060799 | MS.gene22224 | 0.805446 | 1.33E-49 | -1.69E-46 |
| MS.gene060801 | MS.gene22224 | 0.811731 | 6.05E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene22224 | 0.807155 | 5.80E-50 | -1.69E-46 |
| MS.gene060818 | MS.gene22224 | 0.800822 | 1.20E-48 | -1.69E-46 |
| MS.gene060837 | MS.gene22224 | 0.806648 | 7.43E-50 | -1.69E-46 |
| MS.gene061134 | MS.gene22224 | 0.800386 | 1.48E-48 | -1.69E-46 |
| MS.gene061200 | MS.gene22224 | 0.886089 | 4.63E-72 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22224.t1 | MTR_3g449590 | 86.090 | 266 | 9 | 1 | 1 | 238 | 117 | 382 | 3.95e-158 | 447 |
| MS.gene22224.t1 | MTR_5g090160 | 75.285 | 263 | 37 | 1 | 4 | 238 | 118 | 380 | 9.85e-134 | 385 |
| MS.gene22224.t1 | MTR_7g110710 | 56.274 | 263 | 84 | 3 | 4 | 236 | 116 | 377 | 8.11e-98 | 294 |
| MS.gene22224.t1 | MTR_7g110710 | 56.274 | 263 | 84 | 3 | 4 | 236 | 116 | 377 | 1.71e-97 | 293 |
| MS.gene22224.t1 | MTR_1g086030 | 55.172 | 261 | 89 | 1 | 4 | 236 | 51 | 311 | 6.17e-97 | 290 |
| MS.gene22224.t1 | MTR_1g086030 | 55.172 | 261 | 89 | 1 | 4 | 236 | 155 | 415 | 8.60e-96 | 290 |
| MS.gene22224.t1 | MTR_3g096330 | 51.331 | 263 | 97 | 3 | 5 | 237 | 150 | 411 | 3.29e-81 | 259 |
| MS.gene22224.t1 | MTR_8g098840 | 49.615 | 260 | 100 | 3 | 5 | 234 | 118 | 376 | 7.02e-80 | 248 |
| MS.gene22224.t1 | MTR_7g088550 | 49.042 | 261 | 103 | 4 | 4 | 234 | 123 | 383 | 2.49e-78 | 244 |
| MS.gene22224.t1 | MTR_1g100060 | 49.231 | 260 | 103 | 3 | 4 | 234 | 166 | 425 | 6.90e-78 | 244 |
| MS.gene22224.t1 | MTR_4g120730 | 43.939 | 264 | 119 | 2 | 3 | 237 | 112 | 375 | 1.01e-76 | 240 |
| MS.gene22224.t1 | MTR_4g124980 | 45.221 | 272 | 117 | 5 | 5 | 244 | 148 | 419 | 1.62e-75 | 238 |
| MS.gene22224.t1 | MTR_2g435340 | 44.737 | 266 | 110 | 4 | 4 | 236 | 45 | 306 | 1.63e-75 | 234 |
| MS.gene22224.t1 | MTR_8g028725 | 47.955 | 269 | 107 | 4 | 5 | 243 | 129 | 394 | 1.95e-75 | 237 |
| MS.gene22224.t1 | MTR_1g100050 | 48.263 | 259 | 105 | 3 | 5 | 234 | 124 | 382 | 4.32e-75 | 236 |
| MS.gene22224.t1 | MTR_7g078680 | 48.077 | 260 | 106 | 2 | 4 | 234 | 128 | 387 | 4.73e-75 | 236 |
| MS.gene22224.t1 | MTR_2g435340 | 44.737 | 266 | 110 | 4 | 4 | 236 | 110 | 371 | 1.20e-74 | 234 |
| MS.gene22224.t1 | MTR_2g042740 | 46.183 | 262 | 111 | 4 | 5 | 236 | 130 | 391 | 2.33e-73 | 232 |
| MS.gene22224.t1 | MTR_1g100040 | 46.332 | 259 | 110 | 3 | 5 | 234 | 130 | 388 | 3.84e-70 | 224 |
| MS.gene22224.t1 | MTR_1g099850 | 44.015 | 259 | 116 | 3 | 5 | 234 | 129 | 387 | 8.76e-68 | 217 |
| MS.gene22224.t1 | MTR_2g083670 | 53.383 | 133 | 47 | 1 | 4 | 136 | 113 | 230 | 9.05e-40 | 138 |
| MS.gene22224.t1 | MTR_5g090140 | 56.250 | 96 | 37 | 2 | 144 | 234 | 1 | 96 | 1.50e-24 | 96.3 |
| MS.gene22224.t1 | MTR_3g084360 | 35.912 | 181 | 95 | 6 | 25 | 205 | 111 | 270 | 5.08e-21 | 91.7 |
| MS.gene22224.t1 | MTR_2g042750 | 45.455 | 121 | 39 | 4 | 5 | 122 | 186 | 282 | 5.22e-20 | 87.4 |
| MS.gene22224.t1 | MTR_5g043350 | 35.028 | 177 | 99 | 5 | 27 | 203 | 115 | 275 | 1.55e-19 | 87.4 |
| MS.gene22224.t1 | MTR_3g084380 | 33.702 | 181 | 98 | 5 | 34 | 210 | 115 | 277 | 1.80e-19 | 87.4 |
| MS.gene22224.t1 | MTR_6g048610 | 43.243 | 111 | 53 | 2 | 120 | 229 | 20 | 121 | 9.36e-19 | 81.3 |
| MS.gene22224.t1 | MTR_4g084050 | 39.683 | 126 | 67 | 3 | 22 | 147 | 107 | 223 | 5.88e-18 | 82.8 |
| MS.gene22224.t1 | MTR_6g005630 | 31.522 | 184 | 102 | 5 | 34 | 196 | 133 | 313 | 1.31e-17 | 82.0 |
| MS.gene22224.t1 | MTR_6g028080 | 36.364 | 165 | 89 | 4 | 23 | 187 | 116 | 264 | 2.11e-17 | 81.3 |
| MS.gene22224.t1 | MTR_3g054320 | 33.793 | 145 | 90 | 3 | 34 | 176 | 123 | 263 | 4.98e-17 | 80.5 |
| MS.gene22224.t1 | MTR_1g012390 | 29.379 | 177 | 111 | 3 | 43 | 217 | 125 | 289 | 5.68e-16 | 77.4 |
| MS.gene22224.t1 | MTR_8g077320 | 29.289 | 239 | 145 | 8 | 24 | 253 | 97 | 320 | 6.93e-16 | 76.6 |
| MS.gene22224.t1 | MTR_4g083660 | 33.862 | 189 | 102 | 7 | 23 | 206 | 88 | 258 | 8.58e-15 | 73.6 |
| MS.gene22224.t1 | MTR_8g010080 | 31.544 | 149 | 85 | 3 | 44 | 192 | 127 | 258 | 8.76e-15 | 73.6 |
| MS.gene22224.t1 | MTR_5g033680 | 31.169 | 154 | 95 | 3 | 21 | 164 | 134 | 286 | 1.37e-14 | 73.6 |
| MS.gene22224.t1 | MTR_6g005630 | 30.909 | 165 | 105 | 4 | 34 | 196 | 133 | 290 | 4.26e-14 | 71.6 |
| MS.gene22224.t1 | MTR_4g094715 | 34.586 | 133 | 74 | 4 | 44 | 164 | 163 | 294 | 4.60e-14 | 72.0 |
| MS.gene22224.t1 | MTR_8g009810 | 35.754 | 179 | 96 | 7 | 32 | 206 | 121 | 284 | 4.66e-14 | 71.6 |
| MS.gene22224.t1 | MTR_7g110050 | 32.075 | 159 | 84 | 4 | 43 | 189 | 166 | 312 | 2.53e-13 | 69.7 |
| MS.gene22224.t1 | MTR_8g008700 | 33.577 | 137 | 73 | 3 | 44 | 180 | 51 | 169 | 3.16e-13 | 68.6 |
| MS.gene22224.t1 | MTR_8g008765 | 33.577 | 137 | 73 | 3 | 44 | 180 | 128 | 246 | 4.50e-13 | 68.6 |
| MS.gene22224.t1 | MTR_3g030540 | 33.562 | 146 | 83 | 5 | 5 | 147 | 137 | 271 | 6.40e-13 | 68.6 |
| MS.gene22224.t1 | MTR_1g088160 | 29.960 | 247 | 136 | 8 | 36 | 265 | 124 | 350 | 6.42e-13 | 68.2 |
| MS.gene22224.t1 | MTR_2g049400 | 33.117 | 154 | 92 | 3 | 44 | 187 | 122 | 274 | 6.95e-13 | 68.2 |
| MS.gene22224.t1 | MTR_7g035415 | 28.889 | 180 | 103 | 5 | 24 | 203 | 126 | 280 | 8.39e-13 | 67.8 |
| MS.gene22224.t1 | MTR_8g010050 | 26.500 | 200 | 128 | 5 | 44 | 243 | 129 | 309 | 8.47e-13 | 67.8 |
| MS.gene22224.t1 | MTR_2g103410 | 32.370 | 173 | 93 | 6 | 29 | 192 | 143 | 300 | 1.11e-12 | 67.4 |
| MS.gene22224.t1 | MTR_2g060350 | 29.630 | 189 | 101 | 7 | 32 | 206 | 157 | 327 | 1.17e-12 | 67.8 |
| MS.gene22224.t1 | MTR_5g034090 | 26.396 | 197 | 99 | 6 | 43 | 206 | 217 | 400 | 1.22e-12 | 67.8 |
| MS.gene22224.t1 | MTR_5g034090 | 26.396 | 197 | 99 | 6 | 43 | 206 | 217 | 400 | 1.47e-12 | 67.4 |
| MS.gene22224.t1 | MTR_1g052315 | 31.361 | 169 | 101 | 7 | 32 | 187 | 149 | 315 | 1.56e-12 | 67.4 |
| MS.gene22224.t1 | MTR_8g010070 | 32.117 | 137 | 76 | 3 | 44 | 180 | 129 | 248 | 1.94e-12 | 67.0 |
| MS.gene22224.t1 | MTR_2g103410 | 31.414 | 191 | 100 | 7 | 29 | 203 | 143 | 318 | 2.02e-12 | 67.0 |
| MS.gene22224.t1 | MTR_1g086390 | 35.821 | 134 | 73 | 4 | 43 | 164 | 180 | 312 | 3.04e-12 | 66.6 |
| MS.gene22224.t1 | MTR_2g032710 | 28.824 | 170 | 97 | 5 | 36 | 196 | 157 | 311 | 5.67e-12 | 65.5 |
| MS.gene22224.t1 | MTR_7g091840 | 27.329 | 161 | 101 | 4 | 34 | 191 | 154 | 301 | 9.74e-12 | 64.7 |
| MS.gene22224.t1 | MTR_8g065010 | 26.904 | 197 | 99 | 6 | 43 | 206 | 203 | 387 | 2.87e-11 | 63.5 |
| MS.gene22224.t1 | MTR_7g092470 | 31.008 | 129 | 75 | 2 | 31 | 146 | 132 | 259 | 3.38e-11 | 63.5 |
| MS.gene22224.t1 | MTR_8g010090 | 33.088 | 136 | 79 | 4 | 34 | 164 | 117 | 245 | 4.42e-11 | 62.8 |
| MS.gene22224.t1 | MTR_8g010110 | 31.757 | 148 | 83 | 4 | 34 | 180 | 117 | 247 | 5.53e-11 | 62.4 |
| MS.gene22224.t1 | MTR_2g103650 | 29.592 | 196 | 105 | 9 | 27 | 211 | 117 | 290 | 8.27e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22224.t1 | AT4G23820 | 73.004 | 263 | 43 | 1 | 3 | 237 | 113 | 375 | 1.26e-138 | 397 |
| MS.gene22224.t1 | AT5G41870 | 69.847 | 262 | 51 | 2 | 5 | 238 | 120 | 381 | 9.32e-127 | 367 |
| MS.gene22224.t1 | AT3G62110 | 54.198 | 262 | 91 | 2 | 4 | 236 | 116 | 377 | 1.11e-94 | 286 |
| MS.gene22224.t1 | AT3G62110 | 54.198 | 262 | 91 | 2 | 4 | 236 | 116 | 377 | 1.11e-94 | 286 |
| MS.gene22224.t1 | AT4G33440 | 55.385 | 260 | 85 | 3 | 5 | 234 | 146 | 404 | 7.59e-84 | 259 |
| MS.gene22224.t1 | AT3G48950 | 46.743 | 261 | 107 | 4 | 5 | 234 | 119 | 378 | 6.30e-77 | 241 |
| MS.gene22224.t1 | AT3G16850 | 46.970 | 264 | 109 | 3 | 4 | 237 | 113 | 375 | 3.69e-76 | 238 |
| MS.gene22224.t1 | AT3G61490 | 47.148 | 263 | 108 | 3 | 2 | 234 | 131 | 392 | 1.02e-75 | 238 |
| MS.gene22224.t1 | AT3G61490 | 47.148 | 263 | 108 | 3 | 2 | 234 | 116 | 377 | 1.03e-75 | 238 |
| MS.gene22224.t1 | AT3G61490 | 47.148 | 263 | 108 | 3 | 2 | 234 | 116 | 377 | 1.03e-75 | 238 |
| MS.gene22224.t1 | AT3G61490 | 47.148 | 263 | 108 | 3 | 2 | 234 | 116 | 377 | 1.03e-75 | 238 |
| MS.gene22224.t1 | AT3G61490 | 47.148 | 263 | 108 | 3 | 2 | 234 | 229 | 490 | 3.22e-75 | 239 |
| MS.gene22224.t1 | AT4G23500 | 47.510 | 261 | 106 | 3 | 4 | 234 | 141 | 400 | 3.58e-75 | 237 |
| MS.gene22224.t1 | AT1G19170 | 44.485 | 272 | 119 | 5 | 5 | 244 | 162 | 433 | 3.12e-73 | 232 |
| MS.gene22224.t1 | AT2G23900 | 47.059 | 255 | 105 | 4 | 5 | 229 | 130 | 384 | 7.72e-71 | 225 |
| MS.gene22224.t1 | AT3G42950 | 45.420 | 262 | 113 | 4 | 5 | 236 | 140 | 401 | 1.56e-70 | 224 |
| MS.gene22224.t1 | AT3G06770 | 40.824 | 267 | 119 | 4 | 4 | 236 | 29 | 290 | 1.48e-64 | 206 |
| MS.gene22224.t1 | AT5G49215 | 41.065 | 263 | 124 | 3 | 4 | 236 | 114 | 375 | 2.84e-64 | 207 |
| MS.gene22224.t1 | AT3G06770 | 40.824 | 267 | 119 | 4 | 4 | 236 | 47 | 308 | 2.94e-64 | 206 |
| MS.gene22224.t1 | AT3G06770 | 40.824 | 267 | 119 | 4 | 4 | 236 | 47 | 308 | 2.94e-64 | 206 |
| MS.gene22224.t1 | AT5G49215 | 41.573 | 267 | 117 | 4 | 4 | 236 | 116 | 377 | 3.93e-64 | 207 |
| MS.gene22224.t1 | AT3G06770 | 40.824 | 267 | 119 | 4 | 4 | 236 | 117 | 378 | 7.52e-64 | 206 |
| MS.gene22224.t1 | AT3G06770 | 40.824 | 267 | 119 | 4 | 4 | 236 | 116 | 377 | 8.25e-64 | 206 |
| MS.gene22224.t1 | AT3G15720 | 35.028 | 177 | 91 | 6 | 34 | 206 | 48 | 204 | 6.64e-20 | 88.6 |
| MS.gene22224.t1 | AT5G17200 | 38.194 | 144 | 80 | 3 | 23 | 164 | 116 | 252 | 1.12e-19 | 88.2 |
| MS.gene22224.t1 | AT3G15720 | 35.028 | 177 | 91 | 6 | 34 | 206 | 112 | 268 | 1.28e-19 | 88.2 |
| MS.gene22224.t1 | AT3G15720 | 35.028 | 177 | 91 | 6 | 34 | 206 | 111 | 267 | 1.31e-19 | 88.2 |
| MS.gene22224.t1 | AT3G15720 | 35.028 | 177 | 88 | 7 | 34 | 206 | 111 | 264 | 1.32e-17 | 82.4 |
| MS.gene22224.t1 | AT4G32380 | 32.124 | 193 | 112 | 7 | 32 | 223 | 116 | 290 | 1.33e-16 | 79.3 |
| MS.gene22224.t1 | AT4G32380 | 32.759 | 174 | 99 | 6 | 32 | 205 | 116 | 271 | 2.39e-16 | 78.6 |
| MS.gene22224.t1 | AT5G14650 | 27.700 | 213 | 127 | 5 | 7 | 198 | 117 | 323 | 7.32e-16 | 77.0 |
| MS.gene22224.t1 | AT5G14650 | 30.625 | 160 | 103 | 3 | 7 | 164 | 117 | 270 | 8.23e-16 | 76.3 |
| MS.gene22224.t1 | AT4G32375 | 29.651 | 172 | 103 | 4 | 34 | 205 | 19 | 172 | 1.64e-15 | 76.3 |
| MS.gene22224.t1 | AT5G44840 | 33.333 | 159 | 90 | 4 | 43 | 201 | 123 | 265 | 3.20e-15 | 75.1 |
| MS.gene22224.t1 | AT4G35670 | 31.953 | 169 | 98 | 5 | 34 | 202 | 8 | 159 | 3.22e-15 | 74.3 |
| MS.gene22224.t1 | AT4G35670 | 32.738 | 168 | 96 | 5 | 34 | 201 | 115 | 265 | 4.97e-15 | 74.7 |
| MS.gene22224.t1 | AT2G41850 | 35.256 | 156 | 85 | 5 | 29 | 180 | 150 | 293 | 6.46e-15 | 74.3 |
| MS.gene22224.t1 | AT2G43870 | 31.050 | 219 | 124 | 7 | 7 | 221 | 88 | 283 | 8.61e-15 | 73.9 |
| MS.gene22224.t1 | AT3G59850 | 31.963 | 219 | 122 | 7 | 7 | 221 | 90 | 285 | 9.53e-15 | 73.6 |
| MS.gene22224.t1 | AT3G59850 | 31.963 | 219 | 122 | 7 | 7 | 221 | 134 | 329 | 1.27e-14 | 73.6 |
| MS.gene22224.t1 | AT1G02790 | 32.886 | 149 | 85 | 4 | 34 | 180 | 135 | 270 | 1.79e-14 | 73.2 |
| MS.gene22224.t1 | AT3G07970 | 34.646 | 127 | 76 | 3 | 44 | 164 | 167 | 292 | 2.45e-14 | 72.8 |
| MS.gene22224.t1 | AT3G26610 | 29.586 | 169 | 108 | 3 | 43 | 203 | 163 | 328 | 2.63e-14 | 72.8 |
| MS.gene22224.t1 | AT3G57790 | 36.434 | 129 | 68 | 2 | 31 | 146 | 125 | 252 | 7.44e-14 | 71.2 |
| MS.gene22224.t1 | AT3G57790 | 36.434 | 129 | 68 | 2 | 31 | 146 | 125 | 252 | 7.44e-14 | 71.2 |
| MS.gene22224.t1 | AT4G32370 | 30.508 | 177 | 104 | 5 | 33 | 205 | 123 | 284 | 9.31e-14 | 70.5 |
| MS.gene22224.t1 | AT5G27530 | 35.256 | 156 | 72 | 5 | 25 | 180 | 138 | 264 | 3.72e-13 | 69.3 |
| MS.gene22224.t1 | AT1G80140 | 29.444 | 180 | 103 | 6 | 32 | 206 | 59 | 219 | 4.48e-13 | 68.6 |
| MS.gene22224.t1 | AT1G56710 | 35.075 | 134 | 74 | 3 | 43 | 164 | 147 | 279 | 1.22e-12 | 67.8 |
| MS.gene22224.t1 | AT4G18180 | 34.400 | 125 | 78 | 2 | 44 | 164 | 137 | 261 | 1.29e-12 | 67.4 |
| MS.gene22224.t1 | AT1G70500 | 30.286 | 175 | 96 | 5 | 43 | 203 | 163 | 325 | 1.30e-12 | 67.8 |
| MS.gene22224.t1 | AT1G48100 | 30.827 | 133 | 79 | 3 | 44 | 164 | 178 | 309 | 1.91e-12 | 67.0 |
| MS.gene22224.t1 | AT1G65570 | 30.612 | 147 | 96 | 3 | 33 | 176 | 119 | 262 | 2.08e-12 | 67.0 |
| MS.gene22224.t1 | AT1G05650 | 30.769 | 169 | 96 | 5 | 44 | 206 | 122 | 275 | 2.26e-12 | 66.6 |
| MS.gene22224.t1 | AT3G57510 | 33.846 | 130 | 79 | 5 | 41 | 164 | 163 | 291 | 2.84e-12 | 66.6 |
| MS.gene22224.t1 | AT5G44830 | 32.278 | 158 | 81 | 5 | 44 | 201 | 75 | 206 | 6.55e-12 | 65.1 |
| MS.gene22224.t1 | AT5G39910 | 31.220 | 205 | 104 | 7 | 7 | 206 | 104 | 276 | 8.20e-12 | 65.1 |
| MS.gene22224.t1 | AT1G02460 | 32.484 | 157 | 84 | 3 | 34 | 180 | 181 | 325 | 9.69e-12 | 65.1 |
| MS.gene22224.t1 | AT4G01890 | 32.192 | 146 | 79 | 2 | 44 | 180 | 167 | 301 | 2.92e-11 | 63.5 |
| MS.gene22224.t1 | AT1G05660 | 30.178 | 169 | 97 | 6 | 44 | 206 | 122 | 275 | 4.69e-11 | 62.8 |
| MS.gene22224.t1 | AT2G43880 | 34.000 | 150 | 83 | 3 | 44 | 189 | 125 | 262 | 4.88e-11 | 62.4 |
| MS.gene22224.t1 | AT2G43880 | 34.000 | 150 | 83 | 3 | 44 | 189 | 125 | 262 | 4.91e-11 | 62.8 |
| MS.gene22224.t1 | AT1G60590 | 23.214 | 224 | 116 | 7 | 22 | 206 | 199 | 405 | 8.07e-11 | 62.4 |
Find 72 sgRNAs with CRISPR-Local
Find 145 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGAAATAATAATATTTC+TGG | 0.187682 | 3.4:-39852370 | None:intergenic |
| TGTTCGATATGTCACGATTT+TGG | 0.231140 | 3.4:+39852585 | MS.gene22224:CDS |
| TCTTTATTCTTTAGAGGTTA+TGG | 0.259465 | 3.4:+39851708 | None:intergenic |
| ATTGCACCTTTACCATCTTA+TGG | 0.281917 | 3.4:+39851743 | MS.gene22224:CDS |
| GATGGTAAAGGTGCAATTAA+AGG | 0.313514 | 3.4:-39851737 | None:intergenic |
| TTCTTTAGAGGTTATGGAAT+TGG | 0.313836 | 3.4:+39851714 | None:intergenic |
| GAATTACAATTAAGAGTGTT+TGG | 0.330158 | 3.4:+39853373 | MS.gene22224:CDS |
| AATTACAATTAAGAGTGTTT+GGG | 0.348788 | 3.4:+39853374 | MS.gene22224:CDS |
| ATCACGATCCGACGTATAAC+CGG | 0.387708 | 3.4:+39853092 | MS.gene22224:CDS |
| GGTGAGAATGGAACAATTGA+TGG | 0.402464 | 3.4:+39852267 | MS.gene22224:intron |
| CCTACGGCAATGCCGGCAAA+TGG | 0.426213 | 3.4:-39853122 | None:intergenic |
| ATTGTAATTCCCTTCACAAC+TGG | 0.439300 | 3.4:-39853360 | None:intergenic |
| GGGTCAATTCCATCAGTGTT+AGG | 0.443337 | 3.4:-39852622 | None:intergenic |
| ACCGGATCGTCTCCATTTGC+CGG | 0.454556 | 3.4:+39853110 | MS.gene22224:CDS |
| GAGGACTCATACATATCAAC+AGG | 0.465287 | 3.4:+39852999 | MS.gene22224:CDS |
| CGCGACTCTCCTAACACTGA+TGG | 0.487424 | 3.4:+39852613 | MS.gene22224:CDS |
| TAAGAGTGTTTGGGGTGTGA+AGG | 0.492885 | 3.4:+39853383 | MS.gene22224:CDS |
| TTCACTGCCTACGGCAATGC+CGG | 0.494196 | 3.4:-39853129 | None:intergenic |
| TCCCTTCCTCTTCCATAAGA+TGG | 0.498572 | 3.4:-39851755 | None:intergenic |
| CCTTTACCATCTTATGGAAG+AGG | 0.498720 | 3.4:+39851749 | MS.gene22224:CDS |
| AAACTGATATACCTTCCTCC+TGG | 0.504242 | 3.4:-39851782 | None:intergenic |
| TTTCACAAAAGGTTAGTCCT+TGG | 0.506890 | 3.4:+39853538 | MS.gene22224:CDS |
| GCCGGCAAATGGAGACGATC+CGG | 0.511985 | 3.4:-39853111 | None:intergenic |
| ATGTTGAAGGTTGATGTGTT+CGG | 0.515146 | 3.4:-39853180 | None:intergenic |
| TTGTGGCTGTGAAGAGTGGA+TGG | 0.529310 | 3.4:+39853030 | MS.gene22224:CDS |
| CCATTTGCCGGCATTGCCGT+AGG | 0.539892 | 3.4:+39853122 | MS.gene22224:CDS |
| AAATGCTCTACCAGTTGTGA+AGG | 0.542168 | 3.4:+39853350 | MS.gene22224:CDS |
| CCTCTTCCATAAGATGGTAA+AGG | 0.544572 | 3.4:-39851749 | None:intergenic |
| GCCGTAGGCAGTGAAACATC+AGG | 0.545753 | 3.4:+39853137 | MS.gene22224:CDS |
| TACCATCTTATGGAAGAGGA+AGG | 0.549191 | 3.4:+39851753 | MS.gene22224:CDS |
| GCCTGATGTTTCACTGCCTA+CGG | 0.550163 | 3.4:-39853138 | None:intergenic |
| TGGCTGCTCAGCTGAGAACA+TGG | 0.555382 | 3.4:-39853561 | None:intergenic |
| TCGTGATGCCATTGCTAGGA+CGG | 0.555883 | 3.4:-39853076 | None:intergenic |
| AACTGGATGTATATTCCAGA+AGG | 0.565675 | 3.4:-39852412 | None:intergenic |
| AACTGATATACCTTCCTCCT+GGG | 0.566298 | 3.4:-39851781 | None:intergenic |
| AAGAGTGGATGGGATGAATA+CGG | 0.568218 | 3.4:+39853041 | MS.gene22224:CDS |
| CGGATCGTGATGCCATTGCT+AGG | 0.571230 | 3.4:-39853080 | None:intergenic |
| ATATACATCCAGTTTACTGC+AGG | 0.571488 | 3.4:+39852421 | MS.gene22224:CDS |
| ATTACAATTAAGAGTGTTTG+GGG | 0.579707 | 3.4:+39853375 | MS.gene22224:CDS |
| AACACATCAACCTTCAACAT+GGG | 0.582078 | 3.4:+39853183 | MS.gene22224:CDS |
| GTTCGCGATGTGATCATCAC+AGG | 0.583823 | 3.4:+39851821 | MS.gene22224:CDS |
| CTCAGCTGAGAACATGGCCA+AGG | 0.585760 | 3.4:-39853555 | None:intergenic |
| GAAGGGAGCTCCCAGGAGGA+AGG | 0.586526 | 3.4:+39851771 | MS.gene22224:CDS |
| AAGTTCAAATGTCTGCATAG+AGG | 0.586689 | 3.4:+39852980 | MS.gene22224:CDS |
| TGGTGATGTAGGTGACCATC+CGG | 0.592460 | 3.4:+39853311 | MS.gene22224:CDS |
| AATGGAACAATTGATGGGCA+AGG | 0.593507 | 3.4:+39852273 | MS.gene22224:CDS |
| ACCATCTTATGGAAGAGGAA+GGG | 0.599680 | 3.4:+39851754 | MS.gene22224:CDS |
| GGAAGAGGAAGGGAGCTCCC+AGG | 0.601338 | 3.4:+39851764 | MS.gene22224:CDS |
| TCAACCTTCAACATGGGAGT+TGG | 0.604851 | 3.4:+39853189 | MS.gene22224:CDS |
| GATGAATACGGTATTTCATA+CGG | 0.605569 | 3.4:+39853053 | MS.gene22224:CDS |
| TCATACGGCCGTCCTAGCAA+TGG | 0.608461 | 3.4:+39853068 | MS.gene22224:CDS |
| GTGAGAATGGAACAATTGAT+GGG | 0.611373 | 3.4:+39852268 | MS.gene22224:CDS |
| GAACACATCAACCTTCAACA+TGG | 0.615050 | 3.4:+39853182 | MS.gene22224:CDS |
| GATCTTGTGGCTGTGAAGAG+TGG | 0.616644 | 3.4:+39853026 | MS.gene22224:CDS |
| GAGATGTATGGTGGAACATG+TGG | 0.617873 | 3.4:+39852295 | MS.gene22224:CDS |
| AATGCTCTACCAGTTGTGAA+GGG | 0.622542 | 3.4:+39853351 | MS.gene22224:CDS |
| AAAACATCAGAACACTTCCA+AGG | 0.628023 | 3.4:-39853510 | None:intergenic |
| ATCAACAGGAGATGATCTTG+TGG | 0.639297 | 3.4:+39853013 | MS.gene22224:CDS |
| GATCAGGTAGATCTCCACCT+TGG | 0.642012 | 3.4:+39853493 | MS.gene22224:CDS |
| GATACCAACTCCCATGTTGA+AGG | 0.648751 | 3.4:-39853193 | None:intergenic |
| TTGATGGGCAAGGAGATGTA+TGG | 0.649620 | 3.4:+39852283 | MS.gene22224:CDS |
| AACACTGATGGAATTGACCC+AGG | 0.651883 | 3.4:+39852625 | MS.gene22224:CDS |
| ACTGGATGTATATTCCAGAA+GGG | 0.663404 | 3.4:-39852411 | None:intergenic |
| ATGTATGGTGGAACATGTGG+AGG | 0.680192 | 3.4:+39852298 | MS.gene22224:CDS |
| ACATCAGAACACTTCCAAGG+TGG | 0.689498 | 3.4:-39853507 | None:intergenic |
| ATGGGCAAGGAGATGTATGG+TGG | 0.690153 | 3.4:+39852286 | MS.gene22224:CDS |
| CATCGCGAACTCCATCGCCG+TGG | 0.694091 | 3.4:-39851808 | None:intergenic |
| TGTGGCTGTGAAGAGTGGAT+GGG | 0.695217 | 3.4:+39853031 | MS.gene22224:CDS |
| AGAGGAAGGGAGCTCCCAGG+AGG | 0.696203 | 3.4:+39851767 | MS.gene22224:CDS |
| GAGACGATCCGGTTATACGT+CGG | 0.721010 | 3.4:-39853100 | None:intergenic |
| GTAGGCAGTGAAACATCAGG+CGG | 0.764061 | 3.4:+39853140 | MS.gene22224:CDS |
| TCAGTGTTAGGAGAGTCGCG+AGG | 0.797208 | 3.4:-39852610 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTGAAATAATAATATTTC+TGG | - | chr3.4:39852373-39852392 | None:intergenic | 10.0% |
| !! | TATATAGATTAAGTTATGTT+TGG | + | chr3.4:39852759-39852778 | MS.gene22224:intron | 15.0% |
| !! | TTACAAATGTTAACTTTATA+TGG | - | chr3.4:39852918-39852937 | None:intergenic | 15.0% |
| !!! | AAAGTTTTGAATTACATTTT+AGG | - | chr3.4:39852541-39852560 | None:intergenic | 15.0% |
| !!! | AATGAATCTAAAATGTTTAT+TGG | + | chr3.4:39852078-39852097 | MS.gene22224:intron | 15.0% |
| !!! | ATGAATCTAAAATGTTTATT+GGG | + | chr3.4:39852079-39852098 | MS.gene22224:intron | 15.0% |
| !!! | TTTTTGTTAAATTTTTCATC+CGG | - | chr3.4:39853333-39853352 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAATGCATCGT+AGG | + | chr3.4:39852501-39852520 | MS.gene22224:intron | 20.0% |
| !! | AAAAAAAAAAATGCATCGTA+GGG | + | chr3.4:39852502-39852521 | MS.gene22224:intron | 20.0% |
| !! | TAGAAACAAATATCAGTAAA+AGG | - | chr3.4:39853447-39853466 | None:intergenic | 20.0% |
| !!! | AAGCTTGGTTTTAATTTTAT+AGG | - | chr3.4:39852198-39852217 | None:intergenic | 20.0% |
| !!! | AATTACAATTAAGAGTGTTT+GGG | + | chr3.4:39853374-39853393 | MS.gene22224:CDS | 20.0% |
| !!! | AGATTCATTTTAGTATAGTT+GGG | - | chr3.4:39852067-39852086 | None:intergenic | 20.0% |
| !!! | CATTTTTTTTAGATGCTATT+AGG | - | chr3.4:39852033-39852052 | None:intergenic | 20.0% |
| !!! | TAGATTCATTTTAGTATAGT+TGG | - | chr3.4:39852068-39852087 | None:intergenic | 20.0% |
| ! | ACAGAACATTGAATCAATTA+TGG | - | chr3.4:39852155-39852174 | None:intergenic | 25.0% |
| ! | ACCTATAAAAATAAGAGTGA+AGG | - | chr3.4:39852250-39852269 | None:intergenic | 25.0% |
| ! | AGAGATTAGATTTCAAAGAT+TGG | - | chr3.4:39852222-39852241 | None:intergenic | 25.0% |
| ! | ATGTGTATATCGAAAATTCA+AGG | + | chr3.4:39853271-39853290 | MS.gene22224:intron | 25.0% |
| ! | CTAAAACCTTAATATTACTG+CGG | + | chr3.4:39851992-39852011 | MS.gene22224:intron | 25.0% |
| ! | TAAAACCTTAATATTACTGC+GGG | + | chr3.4:39851993-39852012 | MS.gene22224:intron | 25.0% |
| ! | TATAAAAATAAGAGTGAAGG+AGG | - | chr3.4:39852247-39852266 | None:intergenic | 25.0% |
| ! | TGGAATTCAAAAATTCAACA+AGG | - | chr3.4:39852353-39852372 | None:intergenic | 25.0% |
| ! | TGGATAAATGATCTTTACAA+TGG | + | chr3.4:39852719-39852738 | MS.gene22224:intron | 25.0% |
| ! | TTCAAAAATTCAACAAGGTT+TGG | - | chr3.4:39852348-39852367 | None:intergenic | 25.0% |
| ! | TTCTATGATATAAACCTTCA+TGG | + | chr3.4:39853462-39853481 | MS.gene22224:intron | 25.0% |
| !! | AAGATCATTTATCCATGTTT+TGG | - | chr3.4:39852714-39852733 | None:intergenic | 25.0% |
| !! | GCAGGTAAAAATTTGATTTA+TGG | + | chr3.4:39852439-39852458 | MS.gene22224:intron | 25.0% |
| !!! | ATTACAATTAAGAGTGTTTG+GGG | + | chr3.4:39853375-39853394 | MS.gene22224:CDS | 25.0% |
| !!! | CAGTAATATTAAGGTTTTAG+AGG | - | chr3.4:39851992-39852011 | None:intergenic | 25.0% |
| !!! | CTTATTTTTATAGGTGAGAA+TGG | + | chr3.4:39852255-39852274 | MS.gene22224:intron | 25.0% |
| !!! | GAATTACAATTAAGAGTGTT+TGG | + | chr3.4:39853373-39853392 | MS.gene22224:CDS | 25.0% |
| !!! | TCCTTCACTCTTATTTTTAT+AGG | + | chr3.4:39852246-39852265 | MS.gene22224:intron | 25.0% |
| !!! | TGTTTTTGGATTTTCACAAA+AGG | + | chr3.4:39853527-39853546 | MS.gene22224:CDS | 25.0% |
| !!! | TTAATGTTGATTCCAAAACA+TGG | + | chr3.4:39852699-39852718 | MS.gene22224:intron | 25.0% |
| AAATTCCCGCAGTAATATTA+AGG | - | chr3.4:39852001-39852020 | None:intergenic | 30.0% | |
| ATCCACATTAAGACAAACAT+TGG | + | chr3.4:39853213-39853232 | MS.gene22224:intron | 30.0% | |
| ATTAAGACAAACATTGGAAG+AGG | + | chr3.4:39853219-39853238 | MS.gene22224:intron | 30.0% | |
| ATTTCAAAGATTGGTAAGCT+TGG | - | chr3.4:39852213-39852232 | None:intergenic | 30.0% | |
| GATGAATACGGTATTTCATA+CGG | + | chr3.4:39853053-39853072 | MS.gene22224:CDS | 30.0% | |
| TATATCGAAAATTCAAGGCA+AGG | + | chr3.4:39853276-39853295 | MS.gene22224:intron | 30.0% | |
| TCTCGTTAAAAGAAGAAGTT+AGG | + | chr3.4:39852805-39852824 | MS.gene22224:intron | 30.0% | |
| TTCCAATGTTTGTCTTAATG+TGG | - | chr3.4:39853218-39853237 | None:intergenic | 30.0% | |
| TTTAAGGAAGAAAGTTCCAT+CGG | - | chr3.4:39852663-39852682 | None:intergenic | 30.0% | |
| ! | AATTTTTACCTGCAGTAAAC+TGG | - | chr3.4:39852432-39852451 | None:intergenic | 30.0% |
| ! | ATAAAAATTGCTGGTGATGT+AGG | + | chr3.4:39853300-39853319 | MS.gene22224:CDS | 30.0% |
| ! | CAAGTTTGAAGCTAGATTTA+AGG | - | chr3.4:39852679-39852698 | None:intergenic | 30.0% |
| ! | TGTTAAATTTTTCATCCGGA+TGG | - | chr3.4:39853329-39853348 | None:intergenic | 30.0% |
| !! | AGCATGCAATTTTCTTGTTT+TGG | - | chr3.4:39852110-39852129 | None:intergenic | 30.0% |
| !! | AGGTATATCAGTTTTATCCA+CGG | + | chr3.4:39851791-39851810 | MS.gene22224:CDS | 30.0% |
| !!! | TTTTCTAGTTCATATCTCAC+CGG | + | chr3.4:39851877-39851896 | MS.gene22224:intron | 30.0% |
| AAAACATCAGAACACTTCCA+AGG | - | chr3.4:39853513-39853532 | None:intergenic | 35.0% | |
| AACACATCAACCTTCAACAT+GGG | + | chr3.4:39853183-39853202 | MS.gene22224:CDS | 35.0% | |
| AACTGGATGTATATTCCAGA+AGG | - | chr3.4:39852415-39852434 | None:intergenic | 35.0% | |
| AAGTTCAAATGTCTGCATAG+AGG | + | chr3.4:39852980-39852999 | MS.gene22224:CDS | 35.0% | |
| ACTGGATGTATATTCCAGAA+GGG | - | chr3.4:39852414-39852433 | None:intergenic | 35.0% | |
| AGGCAAGGAATAAAAATTGC+TGG | + | chr3.4:39853291-39853310 | MS.gene22224:intron | 35.0% | |
| ATATACATCCAGTTTACTGC+AGG | + | chr3.4:39852421-39852440 | MS.gene22224:CDS | 35.0% | |
| ATCGGTATAGGTATTTACCT+GGG | - | chr3.4:39852645-39852664 | None:intergenic | 35.0% | |
| ATTGCACCTTTACCATCTTA+TGG | + | chr3.4:39851743-39851762 | MS.gene22224:CDS | 35.0% | |
| ATTGTAATTCCCTTCACAAC+TGG | - | chr3.4:39853363-39853382 | None:intergenic | 35.0% | |
| CTCTTCAGAAAGTAGTTTAG+AGG | + | chr3.4:39852886-39852905 | MS.gene22224:intron | 35.0% | |
| GTGAGAATGGAACAATTGAT+GGG | + | chr3.4:39852268-39852287 | MS.gene22224:CDS | 35.0% | |
| TCTATATAGTAAACCTGCCA+AGG | - | chr3.4:39852747-39852766 | None:intergenic | 35.0% | |
| ! | GATGGTAAAGGTGCAATTAA+AGG | - | chr3.4:39851740-39851759 | None:intergenic | 35.0% |
| ! | TGTTCGATATGTCACGATTT+TGG | + | chr3.4:39852585-39852604 | MS.gene22224:CDS | 35.0% |
| ! | TTTCACAAAAGGTTAGTCCT+TGG | + | chr3.4:39853538-39853557 | MS.gene22224:CDS | 35.0% |
| !! | ATGTTGAAGGTTGATGTGTT+CGG | - | chr3.4:39853183-39853202 | None:intergenic | 35.0% |
| !! | TTTTCAAGAATTCTCCCTTC+TGG | + | chr3.4:39852397-39852416 | MS.gene22224:CDS | 35.0% |
| !!! | TGGAAGTGTTCTGATGTTTT+TGG | + | chr3.4:39853513-39853532 | MS.gene22224:CDS | 35.0% |
| AAAATGCATCGTAGGGATAG+AGG | + | chr3.4:39852509-39852528 | MS.gene22224:intron | 40.0% | |
| AAACTGATATACCTTCCTCC+TGG | - | chr3.4:39851785-39851804 | None:intergenic | 40.0% | |
| AAATGCTCTACCAGTTGTGA+AGG | + | chr3.4:39853350-39853369 | MS.gene22224:CDS | 40.0% | |
| AACTGATATACCTTCCTCCT+GGG | - | chr3.4:39851784-39851803 | None:intergenic | 40.0% | |
| AAGACAAACATTGGAAGAGG+AGG | + | chr3.4:39853222-39853241 | MS.gene22224:intron | 40.0% | |
| AAGAGTGGATGGGATGAATA+CGG | + | chr3.4:39853041-39853060 | MS.gene22224:CDS | 40.0% | |
| AATGCTCTACCAGTTGTGAA+GGG | + | chr3.4:39853351-39853370 | MS.gene22224:CDS | 40.0% | |
| ACCATCTTATGGAAGAGGAA+GGG | + | chr3.4:39851754-39851773 | MS.gene22224:CDS | 40.0% | |
| ATAAACCTTCATGGTGAGAC+AGG | + | chr3.4:39853471-39853490 | MS.gene22224:intron | 40.0% | |
| ATCAACAGGAGATGATCTTG+TGG | + | chr3.4:39853013-39853032 | MS.gene22224:CDS | 40.0% | |
| CAACAACATTGCTGCAATGA+AGG | - | chr3.4:39852567-39852586 | None:intergenic | 40.0% | |
| CAACTTAGAACCATACTCAC+CGG | - | chr3.4:39851899-39851918 | None:intergenic | 40.0% | |
| CAGGTAAATACCTATACCGA+TGG | + | chr3.4:39852644-39852663 | MS.gene22224:intron | 40.0% | |
| CATCGGTATAGGTATTTACC+TGG | - | chr3.4:39852646-39852665 | None:intergenic | 40.0% | |
| CCTCTTCCATAAGATGGTAA+AGG | - | chr3.4:39851752-39851771 | None:intergenic | 40.0% | |
| CCTTTACCATCTTATGGAAG+AGG | + | chr3.4:39851749-39851768 | MS.gene22224:CDS | 40.0% | |
| GAACACATCAACCTTCAACA+TGG | + | chr3.4:39853182-39853201 | MS.gene22224:CDS | 40.0% | |
| GAAGAAAGTTCCATCGGTAT+AGG | - | chr3.4:39852657-39852676 | None:intergenic | 40.0% | |
| GAGGACTCATACATATCAAC+AGG | + | chr3.4:39852999-39853018 | MS.gene22224:CDS | 40.0% | |
| GGTGAGAATGGAACAATTGA+TGG | + | chr3.4:39852267-39852286 | MS.gene22224:intron | 40.0% | |
| TACCATCTTATGGAAGAGGA+AGG | + | chr3.4:39851753-39851772 | MS.gene22224:CDS | 40.0% | |
| TGATCTTTACAATGGCTCCT+TGG | + | chr3.4:39852727-39852746 | MS.gene22224:intron | 40.0% | |
| ! | AATGGAACAATTGATGGGCA+AGG | + | chr3.4:39852273-39852292 | MS.gene22224:CDS | 40.0% |
| !! | ATGGTTCTAAGTTGCAGATG+CGG | + | chr3.4:39851905-39851924 | MS.gene22224:intron | 40.0% |
| !! | TTGCAAGCTGGTTTGATACA+TGG | + | chr3.4:39853408-39853427 | MS.gene22224:intron | 40.0% |
| AACACTGATGGAATTGACCC+AGG | + | chr3.4:39852625-39852644 | MS.gene22224:CDS | 45.0% | |
| ACATCAGAACACTTCCAAGG+TGG | - | chr3.4:39853510-39853529 | None:intergenic | 45.0% | |
| ATCACGATCCGACGTATAAC+CGG | + | chr3.4:39853092-39853111 | MS.gene22224:CDS | 45.0% | |
| GATACCAACTCCCATGTTGA+AGG | - | chr3.4:39853196-39853215 | None:intergenic | 45.0% | |
| GGGTCAATTCCATCAGTGTT+AGG | - | chr3.4:39852625-39852644 | None:intergenic | 45.0% | |
| GTGGTTGTGAAACTGTTGTG+CGG | + | chr3.4:39851965-39851984 | MS.gene22224:intron | 45.0% | |
| TCAACCTTCAACATGGGAGT+TGG | + | chr3.4:39853189-39853208 | MS.gene22224:CDS | 45.0% | |
| TCATATCTCACCGGTGAGTA+TGG | + | chr3.4:39851886-39851905 | MS.gene22224:intron | 45.0% | |
| TCCCTTCCTCTTCCATAAGA+TGG | - | chr3.4:39851758-39851777 | None:intergenic | 45.0% | |
| ! | ATGTATGGTGGAACATGTGG+AGG | + | chr3.4:39852298-39852317 | MS.gene22224:CDS | 45.0% |
| ! | GAGATGTATGGTGGAACATG+TGG | + | chr3.4:39852295-39852314 | MS.gene22224:CDS | 45.0% |
| ! | TTGATGGGCAAGGAGATGTA+TGG | + | chr3.4:39852283-39852302 | MS.gene22224:CDS | 45.0% |
| !! | ATCAGTTTTATCCACGGCGA+TGG | + | chr3.4:39851797-39851816 | MS.gene22224:CDS | 45.0% |
| !! | TAAGAGTGTTTGGGGTGTGA+AGG | + | chr3.4:39853383-39853402 | MS.gene22224:CDS | 45.0% |
| ATGGGCAAGGAGATGTATGG+TGG | + | chr3.4:39852286-39852305 | MS.gene22224:CDS | 50.0% | |
| CGGTCACATGTGAGGAAATG+TGG | + | chr3.4:39851925-39851944 | MS.gene22224:intron | 50.0% | |
| CTGATCCTGTCTCACCATGA+AGG | - | chr3.4:39853479-39853498 | None:intergenic | 50.0% | |
| CTTCATGGTGAGACAGGATC+AGG | + | chr3.4:39853477-39853496 | MS.gene22224:intron | 50.0% | |
| CTTTACAATGGCTCCTTGGC+AGG | + | chr3.4:39852731-39852750 | MS.gene22224:intron | 50.0% | |
| GAGACGATCCGGTTATACGT+CGG | - | chr3.4:39853103-39853122 | None:intergenic | 50.0% | |
| GATCAGGTAGATCTCCACCT+TGG | + | chr3.4:39853493-39853512 | MS.gene22224:CDS | 50.0% | |
| GATCTTGTGGCTGTGAAGAG+TGG | + | chr3.4:39853026-39853045 | MS.gene22224:CDS | 50.0% | |
| GCCTGATGTTTCACTGCCTA+CGG | - | chr3.4:39853141-39853160 | None:intergenic | 50.0% | |
| GCGATGTGATCATCACAGGT+AGG | + | chr3.4:39851825-39851844 | MS.gene22224:intron | 50.0% | |
| GTAGGCAGTGAAACATCAGG+CGG | + | chr3.4:39853140-39853159 | MS.gene22224:CDS | 50.0% | |
| GTTCGCGATGTGATCATCAC+AGG | + | chr3.4:39851821-39851840 | MS.gene22224:CDS | 50.0% | |
| TCGTGATGCCATTGCTAGGA+CGG | - | chr3.4:39853079-39853098 | None:intergenic | 50.0% | |
| TGTGGCTGTGAAGAGTGGAT+GGG | + | chr3.4:39853031-39853050 | MS.gene22224:CDS | 50.0% | |
| TTGGCCATGTTCTCAGCTGA+AGG | + | chr3.4:39853557-39853576 | MS.gene22224:CDS | 50.0% | |
| TTGTGGCTGTGAAGAGTGGA+TGG | + | chr3.4:39853030-39853049 | MS.gene22224:CDS | 50.0% | |
| ! | GGTGTGAAGGTTTTGCAAGC+TGG | + | chr3.4:39853396-39853415 | MS.gene22224:intron | 50.0% |
| ! | TGGTGATGTAGGTGACCATC+CGG | + | chr3.4:39853311-39853330 | MS.gene22224:CDS | 50.0% |
| AACCACTATTGCGACCGCGT+CGG | - | chr3.4:39851951-39851970 | None:intergenic | 55.0% | |
| ACCGGATCGTCTCCATTTGC+CGG | + | chr3.4:39853110-39853129 | MS.gene22224:CDS | 55.0% | |
| CGCGACTCTCCTAACACTGA+TGG | + | chr3.4:39852613-39852632 | MS.gene22224:CDS | 55.0% | |
| CGGATCGTGATGCCATTGCT+AGG | - | chr3.4:39853083-39853102 | None:intergenic | 55.0% | |
| GCCGTAGGCAGTGAAACATC+AGG | + | chr3.4:39853137-39853156 | MS.gene22224:CDS | 55.0% | |
| TCAGTGTTAGGAGAGTCGCG+AGG | - | chr3.4:39852613-39852632 | None:intergenic | 55.0% | |
| TCATACGGCCGTCCTAGCAA+TGG | + | chr3.4:39853068-39853087 | MS.gene22224:CDS | 55.0% | |
| TGCAGATGCGGTCACATGTG+AGG | + | chr3.4:39851917-39851936 | MS.gene22224:intron | 55.0% | |
| TTCACTGCCTACGGCAATGC+CGG | - | chr3.4:39853132-39853151 | None:intergenic | 55.0% | |
| CCATTTGCCGGCATTGCCGT+AGG | + | chr3.4:39853122-39853141 | MS.gene22224:CDS | 60.0% | |
| CCTACGGCAATGCCGGCAAA+TGG | - | chr3.4:39853125-39853144 | None:intergenic | 60.0% | |
| GCCGGCAAATGGAGACGATC+CGG | - | chr3.4:39853114-39853133 | None:intergenic | 60.0% | |
| GTGAGGAAATGTGGCCGACG+CGG | + | chr3.4:39851934-39851953 | MS.gene22224:intron | 60.0% | |
| AGAGGAAGGGAGCTCCCAGG+AGG | + | chr3.4:39851767-39851786 | MS.gene22224:CDS | 65.0% | |
| CATCGCGAACTCCATCGCCG+TGG | - | chr3.4:39851811-39851830 | None:intergenic | 65.0% | |
| GAAGGGAGCTCCCAGGAGGA+AGG | + | chr3.4:39851771-39851790 | MS.gene22224:CDS | 65.0% | |
| GGAAGAGGAAGGGAGCTCCC+AGG | + | chr3.4:39851764-39851783 | MS.gene22224:CDS | 65.0% | |
| GGCCGACGCGGTCGCAATAG+TGG | + | chr3.4:39851946-39851965 | MS.gene22224:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 39851722 | 39853576 | 39851722 | ID=MS.gene22224 |
| chr3.4 | mRNA | 39851722 | 39853576 | 39851722 | ID=MS.gene22224.t1;Parent=MS.gene22224 |
| chr3.4 | exon | 39851722 | 39851842 | 39851722 | ID=MS.gene22224.t1.exon1;Parent=MS.gene22224.t1 |
| chr3.4 | CDS | 39851722 | 39851842 | 39851722 | ID=cds.MS.gene22224.t1;Parent=MS.gene22224.t1 |
| chr3.4 | exon | 39852268 | 39852442 | 39852268 | ID=MS.gene22224.t1.exon2;Parent=MS.gene22224.t1 |
| chr3.4 | CDS | 39852268 | 39852442 | 39852268 | ID=cds.MS.gene22224.t1;Parent=MS.gene22224.t1 |
| chr3.4 | exon | 39852576 | 39852646 | 39852576 | ID=MS.gene22224.t1.exon3;Parent=MS.gene22224.t1 |
| chr3.4 | CDS | 39852576 | 39852646 | 39852576 | ID=cds.MS.gene22224.t1;Parent=MS.gene22224.t1 |
| chr3.4 | exon | 39852976 | 39853210 | 39852976 | ID=MS.gene22224.t1.exon4;Parent=MS.gene22224.t1 |
| chr3.4 | CDS | 39852976 | 39853210 | 39852976 | ID=cds.MS.gene22224.t1;Parent=MS.gene22224.t1 |
| chr3.4 | exon | 39853293 | 39853404 | 39853293 | ID=MS.gene22224.t1.exon5;Parent=MS.gene22224.t1 |
| chr3.4 | CDS | 39853293 | 39853404 | 39853293 | ID=cds.MS.gene22224.t1;Parent=MS.gene22224.t1 |
| chr3.4 | exon | 39853493 | 39853576 | 39853493 | ID=MS.gene22224.t1.exon6;Parent=MS.gene22224.t1 |
| chr3.4 | CDS | 39853493 | 39853576 | 39853493 | ID=cds.MS.gene22224.t1;Parent=MS.gene22224.t1 |
| Gene Sequence |
| Protein sequence |
