Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27009.t1 | XP_003589343.2 | 96.2 | 496 | 19 | 0 | 1 | 496 | 1 | 496 | 3.40E-271 | 943.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27009.t1 | Q851Q6 | 63.5 | 436 | 151 | 3 | 62 | 489 | 67 | 502 | 1.5e-155 | 550.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27009.t1 | G7I5V4 | 96.2 | 496 | 19 | 0 | 1 | 496 | 1 | 496 | 2.4e-271 | 943.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene27009 | 0.805826 | 1.11E-49 | -1.69E-46 |
| MS.gene049151 | MS.gene27009 | 0.810188 | 1.30E-50 | -1.69E-46 |
| MS.gene049153 | MS.gene27009 | 0.812987 | 3.21E-51 | -1.69E-46 |
| MS.gene049260 | MS.gene27009 | 0.823521 | 1.32E-53 | -1.69E-46 |
| MS.gene049284 | MS.gene27009 | 0.803857 | 2.85E-49 | -1.69E-46 |
| MS.gene049297 | MS.gene27009 | 0.853456 | 2.36E-61 | -1.69E-46 |
| MS.gene049491 | MS.gene27009 | 0.800003 | 1.77E-48 | -1.69E-46 |
| MS.gene049758 | MS.gene27009 | 0.83465 | 2.65E-56 | -1.69E-46 |
| MS.gene049910 | MS.gene27009 | 0.816351 | 5.78E-52 | -1.69E-46 |
| MS.gene050099 | MS.gene27009 | 0.834741 | 2.51E-56 | -1.69E-46 |
| MS.gene050168 | MS.gene27009 | 0.800057 | 1.72E-48 | -1.69E-46 |
| MS.gene050226 | MS.gene27009 | 0.809236 | 2.09E-50 | -1.69E-46 |
| MS.gene050227 | MS.gene27009 | 0.81472 | 1.33E-51 | -1.69E-46 |
| MS.gene050228 | MS.gene27009 | 0.805535 | 1.27E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene27009 | 0.863381 | 2.59E-64 | -1.69E-46 |
| MS.gene050330 | MS.gene27009 | -0.810656 | 1.03E-50 | -1.69E-46 |
| MS.gene050404 | MS.gene27009 | 0.819518 | 1.11E-52 | -1.69E-46 |
| MS.gene050406 | MS.gene27009 | 0.813878 | 2.05E-51 | -1.69E-46 |
| MS.gene050529 | MS.gene27009 | 0.824158 | 9.39E-54 | -1.69E-46 |
| MS.gene050558 | MS.gene27009 | 0.817346 | 3.46E-52 | -1.69E-46 |
| MS.gene050623 | MS.gene27009 | -0.807029 | 6.17E-50 | -1.69E-46 |
| MS.gene050642 | MS.gene27009 | 0.875074 | 4.10E-68 | -1.69E-46 |
| MS.gene050812 | MS.gene27009 | 0.813619 | 2.34E-51 | -1.69E-46 |
| MS.gene05101 | MS.gene27009 | 0.803178 | 3.95E-49 | -1.69E-46 |
| MS.gene051171 | MS.gene27009 | 0.808821 | 2.57E-50 | -1.69E-46 |
| MS.gene051240 | MS.gene27009 | 0.83191 | 1.28E-55 | -1.69E-46 |
| MS.gene051242 | MS.gene27009 | 0.835424 | 1.69E-56 | -1.69E-46 |
| MS.gene051471 | MS.gene27009 | 0.841245 | 5.34E-58 | -1.69E-46 |
| MS.gene051582 | MS.gene27009 | 0.815032 | 1.14E-51 | -1.69E-46 |
| MS.gene051662 | MS.gene27009 | 0.841662 | 4.15E-58 | -1.69E-46 |
| MS.gene051663 | MS.gene27009 | 0.832676 | 8.25E-56 | -1.69E-46 |
| MS.gene051860 | MS.gene27009 | 0.806097 | 9.71E-50 | -1.69E-46 |
| MS.gene051983 | MS.gene27009 | 0.878864 | 1.99E-69 | -1.69E-46 |
| MS.gene052077 | MS.gene27009 | 0.804235 | 2.38E-49 | -1.69E-46 |
| MS.gene052078 | MS.gene27009 | 0.810482 | 1.13E-50 | -1.69E-46 |
| MS.gene052176 | MS.gene27009 | 0.81197 | 5.36E-51 | -1.69E-46 |
| MS.gene052178 | MS.gene27009 | 0.830777 | 2.43E-55 | -1.69E-46 |
| MS.gene052188 | MS.gene27009 | 0.846276 | 2.41E-59 | -1.69E-46 |
| MS.gene052253 | MS.gene27009 | 0.807947 | 3.94E-50 | -1.69E-46 |
| MS.gene052309 | MS.gene27009 | -0.814263 | 1.68E-51 | -1.69E-46 |
| MS.gene052310 | MS.gene27009 | 0.806178 | 9.33E-50 | -1.69E-46 |
| MS.gene052340 | MS.gene27009 | 0.850442 | 1.69E-60 | -1.69E-46 |
| MS.gene052600 | MS.gene27009 | 0.871737 | 5.44E-67 | -1.69E-46 |
| MS.gene053330 | MS.gene27009 | 0.812368 | 4.39E-51 | -1.69E-46 |
| MS.gene053557 | MS.gene27009 | 0.843833 | 1.10E-58 | -1.69E-46 |
| MS.gene053836 | MS.gene27009 | 0.868466 | 6.40E-66 | -1.69E-46 |
| MS.gene053907 | MS.gene27009 | 0.862332 | 5.46E-64 | -1.69E-46 |
| MS.gene053928 | MS.gene27009 | 0.820404 | 6.98E-53 | -1.69E-46 |
| MS.gene053971 | MS.gene27009 | 0.808722 | 2.69E-50 | -1.69E-46 |
| MS.gene054123 | MS.gene27009 | 0.804269 | 2.34E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene27009 | 0.815543 | 8.76E-52 | -1.69E-46 |
| MS.gene054942 | MS.gene27009 | 0.854839 | 9.42E-62 | -1.69E-46 |
| MS.gene054983 | MS.gene27009 | 0.814357 | 1.61E-51 | -1.69E-46 |
| MS.gene055277 | MS.gene27009 | 0.818071 | 2.37E-52 | -1.69E-46 |
| MS.gene055390 | MS.gene27009 | 0.808155 | 3.56E-50 | -1.69E-46 |
| MS.gene055422 | MS.gene27009 | 0.855999 | 4.33E-62 | -1.69E-46 |
| MS.gene055428 | MS.gene27009 | 0.854579 | 1.12E-61 | -1.69E-46 |
| MS.gene05553 | MS.gene27009 | 0.853064 | 3.06E-61 | -1.69E-46 |
| MS.gene055604 | MS.gene27009 | 0.807141 | 5.84E-50 | -1.69E-46 |
| MS.gene056451 | MS.gene27009 | 0.815336 | 9.74E-52 | -1.69E-46 |
| MS.gene056612 | MS.gene27009 | 0.853421 | 2.42E-61 | -1.69E-46 |
| MS.gene056659 | MS.gene27009 | 0.834586 | 2.75E-56 | -1.69E-46 |
| MS.gene056664 | MS.gene27009 | 0.800713 | 1.27E-48 | -1.69E-46 |
| MS.gene056723 | MS.gene27009 | 0.809946 | 1.47E-50 | -1.69E-46 |
| MS.gene056979 | MS.gene27009 | 0.88073 | 4.31E-70 | -1.69E-46 |
| MS.gene05702 | MS.gene27009 | 0.838206 | 3.30E-57 | -1.69E-46 |
| MS.gene057121 | MS.gene27009 | 0.880406 | 5.64E-70 | -1.69E-46 |
| MS.gene057245 | MS.gene27009 | 0.805998 | 1.02E-49 | -1.69E-46 |
| MS.gene057439 | MS.gene27009 | 0.830618 | 2.65E-55 | -1.69E-46 |
| MS.gene058002 | MS.gene27009 | 0.862512 | 4.81E-64 | -1.69E-46 |
| MS.gene05811 | MS.gene27009 | 0.857289 | 1.81E-62 | -1.69E-46 |
| MS.gene058142 | MS.gene27009 | 0.90415 | 1.66E-79 | -1.69E-46 |
| MS.gene058233 | MS.gene27009 | 0.822384 | 2.44E-53 | -1.69E-46 |
| MS.gene058276 | MS.gene27009 | 0.905378 | 4.57E-80 | -1.69E-46 |
| MS.gene058365 | MS.gene27009 | 0.804476 | 2.12E-49 | -1.69E-46 |
| MS.gene058743 | MS.gene27009 | 0.822392 | 2.43E-53 | -1.69E-46 |
| MS.gene058749 | MS.gene27009 | 0.822518 | 2.27E-53 | -1.69E-46 |
| MS.gene058833 | MS.gene27009 | 0.854262 | 1.38E-61 | -1.69E-46 |
| MS.gene058845 | MS.gene27009 | 0.813047 | 3.12E-51 | -1.69E-46 |
| MS.gene05886 | MS.gene27009 | 0.809695 | 1.67E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene27009 | 0.832834 | 7.54E-56 | -1.69E-46 |
| MS.gene059247 | MS.gene27009 | 0.829535 | 4.88E-55 | -1.69E-46 |
| MS.gene059285 | MS.gene27009 | 0.80584 | 1.10E-49 | -1.69E-46 |
| MS.gene059518 | MS.gene27009 | 0.828512 | 8.63E-55 | -1.69E-46 |
| MS.gene059597 | MS.gene27009 | 0.812332 | 4.47E-51 | -1.69E-46 |
| MS.gene05984 | MS.gene27009 | 0.863141 | 3.08E-64 | -1.69E-46 |
| MS.gene059894 | MS.gene27009 | 0.883567 | 4.02E-71 | -1.69E-46 |
| MS.gene059899 | MS.gene27009 | 0.830091 | 3.57E-55 | -1.69E-46 |
| MS.gene060083 | MS.gene27009 | 0.840563 | 8.07E-58 | -1.69E-46 |
| MS.gene060407 | MS.gene27009 | 0.868258 | 7.46E-66 | -1.69E-46 |
| MS.gene060476 | MS.gene27009 | 0.817959 | 2.52E-52 | -1.69E-46 |
| MS.gene06090 | MS.gene27009 | 0.803843 | 2.87E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene27009 | 0.854297 | 1.35E-61 | -1.69E-46 |
| MS.gene061159 | MS.gene27009 | 0.84567 | 3.51E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27009.t1 | MTR_1g023160 | 96.169 | 496 | 19 | 0 | 1 | 496 | 1 | 496 | 0.0 | 970 |
| MS.gene27009.t1 | MTR_2g019790 | 36.491 | 285 | 154 | 5 | 136 | 419 | 203 | 461 | 3.03e-51 | 184 |
| MS.gene27009.t1 | MTR_1g073010 | 40.376 | 213 | 105 | 5 | 202 | 400 | 250 | 454 | 1.08e-37 | 145 |
| MS.gene27009.t1 | MTR_2g030370 | 31.387 | 137 | 75 | 3 | 272 | 389 | 27 | 163 | 2.26e-15 | 78.2 |
| MS.gene27009.t1 | MTR_2g030335 | 34.653 | 101 | 57 | 2 | 272 | 363 | 27 | 127 | 6.09e-12 | 65.5 |
| MS.gene27009.t1 | MTR_3g094880 | 37.069 | 116 | 59 | 3 | 270 | 383 | 65 | 168 | 1.92e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27009.t1 | AT5G18570 | 34.857 | 350 | 187 | 6 | 69 | 417 | 209 | 518 | 7.54e-47 | 173 |
| MS.gene27009.t1 | AT1G07615 | 38.793 | 232 | 116 | 4 | 202 | 415 | 225 | 448 | 3.05e-37 | 143 |
| MS.gene27009.t1 | AT1G30580 | 33.088 | 136 | 72 | 3 | 272 | 388 | 27 | 162 | 1.56e-15 | 79.0 |
| MS.gene27009.t1 | AT4G39520 | 36.842 | 114 | 58 | 3 | 272 | 383 | 68 | 169 | 4.53e-11 | 65.1 |
Find 120 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGGCATTAATGTTGTAAA+TGG | 0.168245 | 1.3:+2212100 | None:intergenic |
| CCACGACCTCACTCTGTTAT+TGG | 0.196696 | 1.3:-2210484 | MS.gene27009:CDS |
| GTTCGTATTCCTGTTCCTTT+AGG | 0.240911 | 1.3:-2215154 | MS.gene27009:intron |
| TTATTGGAAAAGCGCGTTTC+GGG | 0.247186 | 1.3:+2215652 | None:intergenic |
| TGGTAGTTGCGTAGGGTTTA+AGG | 0.250524 | 1.3:+2215552 | None:intergenic |
| ACAGTTCTGTAGTCATTTAC+AGG | 0.252618 | 1.3:+2211800 | None:intergenic |
| AGGAGATAAGGGCCGCTTTA+AGG | 0.264646 | 1.3:-2210260 | MS.gene27009:CDS |
| TAGAAATGCCACGGCATAAT+AGG | 0.302506 | 1.3:-2213273 | MS.gene27009:CDS |
| AAATGGATAATCAGCAATAT+CGG | 0.307095 | 1.3:+2212117 | None:intergenic |
| TTGTTATTCGTTTGTGTTGT+TGG | 0.323888 | 1.3:+2215593 | None:intergenic |
| ACTCAAGAAATTATGAGAAT+TGG | 0.328796 | 1.3:-2210607 | MS.gene27009:CDS |
| ATTATTGGAAAAGCGCGTTT+CGG | 0.340664 | 1.3:+2215651 | None:intergenic |
| CCATCAAGGCGTCCAAGATT+TGG | 0.342473 | 1.3:+2212082 | None:intergenic |
| GAAACTTCAGAGCTTGGTTT+TGG | 0.342930 | 1.3:+2210562 | None:intergenic |
| AGCGTTGATTTCCCAGCATT+TGG | 0.349531 | 1.3:+2212166 | None:intergenic |
| ACAACATTAATGCCAAATCT+TGG | 0.357348 | 1.3:-2212094 | MS.gene27009:CDS |
| TGCTGGGAAATCAACGCTTC+TGG | 0.366085 | 1.3:-2212161 | MS.gene27009:CDS |
| TGAAGGAAAAGATACGTTAT+TGG | 0.376575 | 1.3:-2215278 | MS.gene27009:CDS |
| AAAACCAAGCTCTGAAGTTT+CGG | 0.377456 | 1.3:-2210560 | MS.gene27009:CDS |
| CATGGTTAGCGAGATGTTAA+AGG | 0.379680 | 1.3:-2210280 | MS.gene27009:CDS |
| CACGAACGGTGATGATTACT+TGG | 0.395278 | 1.3:+2215488 | None:intergenic |
| CCAAATCTTGGACGCCTTGA+TGG | 0.397530 | 1.3:-2212082 | MS.gene27009:CDS |
| GATTTGCCTGGTCTTATAGA+AGG | 0.401210 | 1.3:-2212010 | MS.gene27009:CDS |
| AAGTTGAAGGAAGTGATTAT+TGG | 0.401545 | 1.3:+2215636 | None:intergenic |
| TGGAGTTTCATAGTAAGAAT+AGG | 0.401600 | 1.3:-2215258 | MS.gene27009:CDS |
| CACAGTTGTGAAAAGCAAAC+GGG | 0.420716 | 1.3:-2213710 | MS.gene27009:CDS |
| TACATCCCTGCTCCCAAGTT+GGG | 0.426129 | 1.3:+2212055 | None:intergenic |
| ACTAGAAACCAACGGTTCCT+TGG | 0.430294 | 1.3:+2210224 | None:intergenic |
| TATGGTCGTTCAAGGTAATC+AGG | 0.432822 | 1.3:+2210983 | None:intergenic |
| TTGTAGGGACTTCCAAATGC+TGG | 0.444567 | 1.3:-2212178 | MS.gene27009:intron |
| GGTGATCCCAACTTGGGAGC+AGG | 0.459574 | 1.3:-2212061 | MS.gene27009:CDS |
| CGAGATGTTAAAGGAGATAA+GGG | 0.460007 | 1.3:-2210271 | MS.gene27009:CDS |
| GCAAACAAACCTAAAGGAAC+AGG | 0.461494 | 1.3:+2215145 | None:intergenic |
| TCTTATAGAAGGTGCTCACT+TGG | 0.464858 | 1.3:-2211999 | MS.gene27009:CDS |
| CCTTGATGGTGATCCCAACT+TGG | 0.465028 | 1.3:-2212068 | MS.gene27009:CDS |
| CAACAATGTATGGTCGTTCA+AGG | 0.466565 | 1.3:+2210975 | None:intergenic |
| TGAGCCGAAACTTCAGAGCT+TGG | 0.472376 | 1.3:+2210556 | None:intergenic |
| GCTACATTGGCAGATTTGCC+TGG | 0.472873 | 1.3:-2212022 | MS.gene27009:CDS |
| TCTAAGAAGGACCCGGCTAC+TGG | 0.473999 | 1.3:-2211852 | MS.gene27009:CDS |
| ATCGGGTTTCGCAAGCGTAA+TGG | 0.482247 | 1.3:+2212135 | None:intergenic |
| GCACAGTTGTGAAAAGCAAA+CGG | 0.484997 | 1.3:-2213711 | MS.gene27009:CDS |
| GTTGATGGTGGTAGTTGCGT+AGG | 0.485221 | 1.3:+2215544 | None:intergenic |
| GATGAGAGATGACTCGGATA+AGG | 0.486698 | 1.3:-2213221 | MS.gene27009:intron |
| AACAACATGGACCAGTAGCC+GGG | 0.486773 | 1.3:+2211841 | None:intergenic |
| TTATTCAAAACAACAATGTA+TGG | 0.487346 | 1.3:+2210965 | None:intergenic |
| GCGAGATGTTAAAGGAGATA+AGG | 0.492991 | 1.3:-2210272 | MS.gene27009:CDS |
| ATAATTTCTTGAGTCAATGT+TGG | 0.494238 | 1.3:+2210616 | None:intergenic |
| CGCAACAAGAACTTCATCAC+CGG | 0.498936 | 1.3:+2213660 | None:intergenic |
| ACCTGGGGAGGAAGTTAAGT+TGG | 0.499431 | 1.3:-2212636 | MS.gene27009:CDS |
| TTTACTTCTTACTTGAGGAA+TGG | 0.500469 | 1.3:-2215193 | MS.gene27009:CDS |
| TTTGTGTTGTTGGAATTTGA+AGG | 0.509342 | 1.3:+2215603 | None:intergenic |
| AAGGCAGTGCGTTGATTCCA+AGG | 0.513530 | 1.3:-2210241 | MS.gene27009:CDS |
| TGGGTCTTTGATACTTCCAA+TGG | 0.513837 | 1.3:-2215335 | MS.gene27009:CDS |
| CGTTGATTCCAAGGAACCGT+TGG | 0.514117 | 1.3:-2210232 | MS.gene27009:CDS |
| GTGATTATTTATGCTGATGA+AGG | 0.516366 | 1.3:-2215295 | MS.gene27009:CDS |
| GTTGCGAGGGGTGGACAAGG+AGG | 0.518059 | 1.3:-2213643 | MS.gene27009:CDS |
| TTGCGAGGGGTGGACAAGGA+GGG | 0.520295 | 1.3:-2213642 | MS.gene27009:CDS |
| AATGGATAATCAGCAATATC+GGG | 0.521649 | 1.3:+2212118 | None:intergenic |
| CAAGTAATCATCACCGTTCG+TGG | 0.521768 | 1.3:-2215487 | MS.gene27009:CDS |
| ATACTTCCAATGGGTGGTCA+TGG | 0.522317 | 1.3:-2215325 | MS.gene27009:CDS |
| GTGATGAAGTTCTTGTTGCG+AGG | 0.528670 | 1.3:-2213657 | MS.gene27009:CDS |
| CAGTTCTGTAGTCATTTACA+GGG | 0.534642 | 1.3:+2211801 | None:intergenic |
| TTTGGTTCATGGTCAACCTG+GGG | 0.544159 | 1.3:-2212651 | MS.gene27009:CDS |
| ATACATCCCTGCTCCCAAGT+TGG | 0.545507 | 1.3:+2212054 | None:intergenic |
| TGTAGGGACTTCCAAATGCT+GGG | 0.545787 | 1.3:-2212177 | MS.gene27009:intron |
| TTATTGCAGAAAGCGTATCA+TGG | 0.546103 | 1.3:-2210298 | MS.gene27009:intron |
| CAACAACATGGACCAGTAGC+CGG | 0.547834 | 1.3:+2211840 | None:intergenic |
| TGCGAGGGGTGGACAAGGAG+GGG | 0.550722 | 1.3:-2213641 | MS.gene27009:intron |
| CCAATAACAGAGTGAGGTCG+TGG | 0.551059 | 1.3:+2210484 | None:intergenic |
| ATCACCGTTCGTGGCGGAGA+CGG | 0.553180 | 1.3:-2215478 | MS.gene27009:CDS |
| GTGATCCCAACTTGGGAGCA+GGG | 0.553268 | 1.3:-2212060 | MS.gene27009:CDS |
| TCCAACTTAACTTCCTCCCC+AGG | 0.554908 | 1.3:+2212635 | None:intergenic |
| CTTGTTGCGAGGGGTGGACA+AGG | 0.554974 | 1.3:-2213646 | MS.gene27009:CDS |
| TGATGAAGTTCTTGTTGCGA+GGG | 0.555435 | 1.3:-2213656 | MS.gene27009:CDS |
| GGGTCTTTGATACTTCCAAT+GGG | 0.556011 | 1.3:-2215334 | MS.gene27009:CDS |
| CTTATAGAAGGTGCTCACTT+GGG | 0.556651 | 1.3:-2211998 | MS.gene27009:CDS |
| AAGTTAAATGAGAGAAATGA+AGG | 0.556816 | 1.3:+2215676 | None:intergenic |
| TTGATGGTGGTAGTTGCGTA+GGG | 0.558642 | 1.3:+2215545 | None:intergenic |
| CGTGGCGGAGACGGTGGTCA+CGG | 0.559725 | 1.3:-2215469 | MS.gene27009:CDS |
| CAGTAGATGCGTCAACAACA+TGG | 0.566647 | 1.3:+2211828 | None:intergenic |
| TCACCACCATGACCACCCAT+TGG | 0.575301 | 1.3:+2215319 | None:intergenic |
| GGAACAGGAATACGAACAGT+AGG | 0.577522 | 1.3:+2215160 | None:intergenic |
| CTACGAGTTGTAGCCGACGT+TGG | 0.577677 | 1.3:-2212605 | MS.gene27009:CDS |
| GTATTCGTCTGAAGCTACAT+TGG | 0.579587 | 1.3:-2212035 | MS.gene27009:CDS |
| CCAAGTTGGGATCACCATCA+AGG | 0.581733 | 1.3:+2212068 | None:intergenic |
| ATTATGAGAATTGGCAGCGA+TGG | 0.582383 | 1.3:-2210598 | MS.gene27009:CDS |
| GGTTCATGGTCAACCTGGGG+AGG | 0.582643 | 1.3:-2212648 | MS.gene27009:CDS |
| GACTGAAGAAAGTGACCCAA+AGG | 0.583497 | 1.3:-2210527 | MS.gene27009:CDS |
| TGAGGCATCTAAGAAGGACC+CGG | 0.584490 | 1.3:-2211859 | MS.gene27009:CDS |
| GGTGGTAATGTTGATGCTGT+TGG | 0.588083 | 1.3:-2215220 | MS.gene27009:CDS |
| GAAGTTCTTGTTGCGAGGGG+TGG | 0.596690 | 1.3:-2213652 | MS.gene27009:CDS |
| CTTGATGGTGATCCCAACTT+GGG | 0.597546 | 1.3:-2212067 | MS.gene27009:CDS |
| ACCACCGTCTCCGCCACGAA+CGG | 0.600216 | 1.3:+2215474 | None:intergenic |
| GGAAACTACATACCTCTGGC+AGG | 0.603249 | 1.3:+2210936 | None:intergenic |
| AGAAGGTGCTCACTTGGGAA+AGG | 0.609931 | 1.3:-2211993 | MS.gene27009:intron |
| ACCGTTCGTGGCGGAGACGG+TGG | 0.613535 | 1.3:-2215475 | MS.gene27009:CDS |
| TCTTTGATACTTCCAATGGG+TGG | 0.614114 | 1.3:-2215331 | MS.gene27009:CDS |
| TTAGCTGATTTAGCACGACC+CGG | 0.616899 | 1.3:-2213679 | MS.gene27009:CDS |
| TTAGCTTGTTAGAAATGCCA+CGG | 0.620564 | 1.3:-2213282 | MS.gene27009:CDS |
| TTTGTTAAGGCTGTTGATGG+TGG | 0.622985 | 1.3:+2215532 | None:intergenic |
| CTTCCAATGGGTGGTCATGG+TGG | 0.633367 | 1.3:-2215322 | MS.gene27009:CDS |
| TGAGCACCTTCTATAAGACC+AGG | 0.641306 | 1.3:+2212004 | None:intergenic |
| ATCAACGCACTGCCTTAAAG+CGG | 0.642286 | 1.3:+2210248 | None:intergenic |
| TAACGTGATGAGAGATGACT+CGG | 0.642615 | 1.3:-2213227 | MS.gene27009:CDS |
| GCAACAAGAACTTCATCACC+GGG | 0.643404 | 1.3:+2213661 | None:intergenic |
| AATGAGAGAAATGAAGGTGG+TGG | 0.643964 | 1.3:+2215682 | None:intergenic |
| ACTTGGTCGAAGAATTTGTG+AGG | 0.646457 | 1.3:+2215505 | None:intergenic |
| GAATAAGATTGACCTGCCAG+AGG | 0.647898 | 1.3:-2210948 | MS.gene27009:intron |
| AGGTTTAATGCGAAACGTGG+TGG | 0.659737 | 1.3:-2215238 | MS.gene27009:CDS |
| GTAATCATCACCGTTCGTGG+CGG | 0.663242 | 1.3:-2215484 | MS.gene27009:CDS |
| CAACGTCGGCTACAACTCGT+AGG | 0.664807 | 1.3:+2212606 | None:intergenic |
| CTAACTCCAATAACAGAGTG+AGG | 0.666857 | 1.3:+2210478 | None:intergenic |
| AATAGGTTTAATGCGAAACG+TGG | 0.677121 | 1.3:-2215241 | MS.gene27009:CDS |
| TTAAATGAGAGAAATGAAGG+TGG | 0.681222 | 1.3:+2215679 | None:intergenic |
| ACTTACAATTAAACCAACGT+CGG | 0.682305 | 1.3:+2212592 | None:intergenic |
| TGTGGCACACTAGAAACCAA+CGG | 0.704503 | 1.3:+2210216 | None:intergenic |
| GATGAAGTTCTTGTTGCGAG+GGG | 0.705915 | 1.3:-2213655 | MS.gene27009:CDS |
| ACAGTTGTGAAAAGCAAACG+GGG | 0.706082 | 1.3:-2213709 | MS.gene27009:CDS |
| CCCAAAGGAAAAGAAACTTG+AGG | 0.715840 | 1.3:-2210512 | MS.gene27009:CDS |
| ATAGGATGCAAATCTCACTG+TGG | 0.804712 | 1.3:+2210198 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACTTGATTAAAAATTCAA+CGG | + | chr1.3:2214608-2214627 | None:intergenic | 15.0% |
| !! | AATAATATCATATAAGATGT+TGG | + | chr1.3:2211337-2211356 | None:intergenic | 15.0% |
| !! | ATAAATAAATTCATACTCAT+TGG | - | chr1.3:2212457-2212476 | MS.gene27009:intron | 15.0% |
| !! | ATTATGTTTGATTAATTGAT+TGG | - | chr1.3:2211100-2211119 | MS.gene27009:intron | 15.0% |
| !! | TTGCTTCTTAAAAAAAATAA+TGG | + | chr1.3:2214245-2214264 | None:intergenic | 15.0% |
| !!! | AAATCAAGTTTAGTTTTTTA+TGG | + | chr1.3:2212153-2212172 | None:intergenic | 15.0% |
| !!! | AATCAAGTTTAGTTTTTTAT+GGG | + | chr1.3:2212152-2212171 | None:intergenic | 15.0% |
| !!! | AATGTTGTTATGTTTTTATT+AGG | - | chr1.3:2211066-2211085 | MS.gene27009:intron | 15.0% |
| !!! | AATTTCATTTTTTGATGTTA+TGG | - | chr1.3:2210794-2210813 | MS.gene27009:intron | 15.0% |
| !!! | AATTTCCTATTATTTTGTAA+AGG | - | chr1.3:2215039-2215058 | MS.gene27009:intron | 15.0% |
| !!! | ATGATAATTTTGAGATTTAT+GGG | - | chr1.3:2213463-2213482 | MS.gene27009:intron | 15.0% |
| !!! | ATTTCCTATTATTTTGTAAA+GGG | - | chr1.3:2215040-2215059 | MS.gene27009:intron | 15.0% |
| !!! | ATTTTTTAACTTCATATCAA+TGG | + | chr1.3:2214535-2214554 | None:intergenic | 15.0% |
| !!! | GATTTTTTTTTAATCTTTCA+GGG | - | chr1.3:2214016-2214035 | MS.gene27009:intron | 15.0% |
| !!! | GTCTAAATCTTTTTTTAATA+TGG | - | chr1.3:2213588-2213607 | MS.gene27009:intron | 15.0% |
| !!! | TGATTTTTTTTTAATCTTTC+AGG | - | chr1.3:2214015-2214034 | MS.gene27009:intron | 15.0% |
| !!! | TGTTCATTAATTTTAATTTC+AGG | - | chr1.3:2215262-2215281 | MS.gene27009:CDS | 15.0% |
| !!! | TTATATTAGTTGACTTTTTT+TGG | + | chr1.3:2211611-2211630 | None:intergenic | 15.0% |
| !! | AATCTCAAAATTATCATCAT+TGG | + | chr1.3:2213460-2213479 | None:intergenic | 20.0% |
| !! | AGTTTATTATTGTGAATTAC+AGG | - | chr1.3:2212182-2212201 | MS.gene27009:intron | 20.0% |
| !! | ATATTTAATAAGCAGCTATA+TGG | + | chr1.3:2213996-2214015 | None:intergenic | 20.0% |
| !! | ATGCAATCTATAAGATTATT+CGG | + | chr1.3:2214434-2214453 | None:intergenic | 20.0% |
| !! | CATATTACAAGATAGTAATA+CGG | + | chr1.3:2215216-2215235 | None:intergenic | 20.0% |
| !! | GTAAGATAAAATTTAACTGA+TGG | + | chr1.3:2211957-2211976 | None:intergenic | 20.0% |
| !! | TAAATTATCAGAGCTAATAA+AGG | + | chr1.3:2214670-2214689 | None:intergenic | 20.0% |
| !! | TTAATATGGTGAACTAAAAT+TGG | - | chr1.3:2213602-2213621 | MS.gene27009:intron | 20.0% |
| !! | TTATTCAAAACAACAATGTA+TGG | + | chr1.3:2214953-2214972 | None:intergenic | 20.0% |
| !! | TTTATTCGTAAGTACAAAAA+TGG | + | chr1.3:2211443-2211462 | None:intergenic | 20.0% |
| !!! | AAAAAATAATGGAGTCTATA+AGG | + | chr1.3:2214234-2214253 | None:intergenic | 20.0% |
| !!! | AAAAATAATGGAGTCTATAA+GGG | + | chr1.3:2214233-2214252 | None:intergenic | 20.0% |
| !!! | AAGATACATTTTAAAATGAC+AGG | + | chr1.3:2213116-2213135 | None:intergenic | 20.0% |
| !!! | ATGTCTTTTCATATTTTAAC+TGG | - | chr1.3:2211755-2211774 | MS.gene27009:intron | 20.0% |
| !!! | ATTTCATATTCAGTTTTATC+AGG | - | chr1.3:2212970-2212989 | MS.gene27009:intron | 20.0% |
| !!! | CTGTAACAATTTTAAAATAC+AGG | + | chr1.3:2213242-2213261 | None:intergenic | 20.0% |
| !!! | CTGTATTTTAAAATTGTTAC+AGG | - | chr1.3:2213240-2213259 | MS.gene27009:CDS | 20.0% |
| !!! | GATGATAATTTTGAGATTTA+TGG | - | chr1.3:2213462-2213481 | MS.gene27009:intron | 20.0% |
| !!! | GTTTTATCTTACATTAAGAT+AGG | + | chr1.3:2213092-2213111 | None:intergenic | 20.0% |
| !!! | TAAATTTTATCTTACCACTT+TGG | - | chr1.3:2211962-2211981 | MS.gene27009:intron | 20.0% |
| !!! | TTAATTTTAATTTCAGGTTG+AGG | - | chr1.3:2215268-2215287 | MS.gene27009:CDS | 20.0% |
| !!! | TTTAAAATTGTTACAGGTTT+TGG | - | chr1.3:2213246-2213265 | MS.gene27009:CDS | 20.0% |
| !!! | TTTAGATTCAAGTTTTTTCT+TGG | - | chr1.3:2214167-2214186 | MS.gene27009:intron | 20.0% |
| ! | AAAGTGAAATATCCCTTTAA+AGG | + | chr1.3:2214488-2214507 | None:intergenic | 25.0% |
| ! | AAATGGATAATCAGCAATAT+CGG | + | chr1.3:2213801-2213820 | None:intergenic | 25.0% |
| ! | AAATTTGCAAACAAACCTAA+AGG | + | chr1.3:2210779-2210798 | None:intergenic | 25.0% |
| ! | AACAAACAGAGAACTAAATA+AGG | + | chr1.3:2213368-2213387 | None:intergenic | 25.0% |
| ! | AAGTTAAATGAGAGAAATGA+AGG | + | chr1.3:2210242-2210261 | None:intergenic | 25.0% |
| ! | AATTTCACTTGGACAAAAAA+AGG | + | chr1.3:2213635-2213654 | None:intergenic | 25.0% |
| ! | ACAAAATTACTAACCATACA+TGG | + | chr1.3:2211988-2212007 | None:intergenic | 25.0% |
| ! | ACAACAATAATAACCAAGAT+AGG | + | chr1.3:2212574-2212593 | None:intergenic | 25.0% |
| ! | ACTCAAGAAATTATGAGAAT+TGG | - | chr1.3:2215308-2215327 | MS.gene27009:CDS | 25.0% |
| ! | ATAATTTCTTGAGTCAATGT+TGG | + | chr1.3:2215302-2215321 | None:intergenic | 25.0% |
| ! | ATCTTCATAATAAATAACCG+TGG | - | chr1.3:2213398-2213417 | MS.gene27009:intron | 25.0% |
| ! | ATGTGGATAAGATTAGAATA+AGG | - | chr1.3:2211415-2211434 | MS.gene27009:intron | 25.0% |
| ! | ATTAAAAACTCCAAAACATG+AGG | + | chr1.3:2214860-2214879 | None:intergenic | 25.0% |
| ! | ATTGTGCATAAAGTAATTTG+TGG | - | chr1.3:2214814-2214833 | MS.gene27009:intron | 25.0% |
| ! | ATTTCACTTGGACAAAAAAA+GGG | + | chr1.3:2213634-2213653 | None:intergenic | 25.0% |
| ! | CACAATAATAAACTCAATGA+GGG | + | chr1.3:2212176-2212195 | None:intergenic | 25.0% |
| ! | CAGAAAATGAAATGAAAACA+AGG | + | chr1.3:2212078-2212097 | None:intergenic | 25.0% |
| ! | GAAATTTGGTTGATCAATTA+TGG | + | chr1.3:2212879-2212898 | None:intergenic | 25.0% |
| ! | GATATATAGACTGTCTAAAT+CGG | + | chr1.3:2211007-2211026 | None:intergenic | 25.0% |
| ! | GATTTACATTGTAATGTTAG+AGG | - | chr1.3:2211154-2211173 | MS.gene27009:intron | 25.0% |
| ! | TCACAATAATAAACTCAATG+AGG | + | chr1.3:2212177-2212196 | None:intergenic | 25.0% |
| ! | TGTTCAAAAACTATTGTTTC+TGG | + | chr1.3:2213017-2213036 | None:intergenic | 25.0% |
| ! | TTAAAAACTCCAAAACATGA+GGG | + | chr1.3:2214859-2214878 | None:intergenic | 25.0% |
| ! | TTACATTAAGATAGGAACAA+AGG | + | chr1.3:2213084-2213103 | None:intergenic | 25.0% |
| ! | TTATAAGTTCTTCCAATTAG+TGG | - | chr1.3:2210942-2210961 | MS.gene27009:intron | 25.0% |
| ! | TTTGGCATTAATGTTGTAAA+TGG | + | chr1.3:2213818-2213837 | None:intergenic | 25.0% |
| !! | ATGAAGTTAATCTTGTTGTA+GGG | - | chr1.3:2213722-2213741 | MS.gene27009:intron | 25.0% |
| !! | TGACAAATTAGCAAGTATTT+TGG | + | chr1.3:2212905-2212924 | None:intergenic | 25.0% |
| !!! | AAGCTATTTTTGATAACTTG+TGG | - | chr1.3:2210871-2210890 | MS.gene27009:intron | 25.0% |
| !!! | AAGTATTTTGGACAGAAATT+TGG | + | chr1.3:2212893-2212912 | None:intergenic | 25.0% |
| !!! | AAGTTTTTTCTTGGTTTAAC+AGG | - | chr1.3:2214176-2214195 | MS.gene27009:intron | 25.0% |
| !!! | ACATAATAAGTACTGAAAAG+TGG | + | chr1.3:2211560-2211579 | None:intergenic | 25.0% |
| !!! | AGTTTTAAAAACATTGGTCA+TGG | - | chr1.3:2211794-2211813 | MS.gene27009:CDS | 25.0% |
| !!! | ATAATAAGTACTGAAAAGTG+GGG | + | chr1.3:2211558-2211577 | None:intergenic | 25.0% |
| !!! | CAATGTTTTAAAAACTGAAC+TGG | - | chr1.3:2211640-2211659 | MS.gene27009:intron | 25.0% |
| !!! | CATAATAAGTACTGAAAAGT+GGG | + | chr1.3:2211559-2211578 | None:intergenic | 25.0% |
| !!! | GCTTTTTTCGTTTTTGATTT+TGG | + | chr1.3:2210512-2210531 | None:intergenic | 25.0% |
| !!! | GGTTTTTCAATTTCCTTTTT+GGG | + | chr1.3:2210491-2210510 | None:intergenic | 25.0% |
| !!! | TGGTTTTTCAATTTCCTTTT+TGG | + | chr1.3:2210492-2210511 | None:intergenic | 25.0% |
| !!! | TTTTTGATAACTTGTGGTTT+TGG | - | chr1.3:2210877-2210896 | MS.gene27009:intron | 25.0% |
| AAAAGACATTGTTCACGATT+CGG | + | chr1.3:2211744-2211763 | None:intergenic | 30.0% | |
| AAGAACAAACAGGAAATTTG+TGG | + | chr1.3:2214716-2214735 | None:intergenic | 30.0% | |
| AAGTTGAAGGAAGTGATTAT+TGG | + | chr1.3:2210282-2210301 | None:intergenic | 30.0% | |
| AATCCAAAAGCAAAAGAAAG+AGG | + | chr1.3:2214747-2214766 | None:intergenic | 30.0% | |
| AATGGATAATCAGCAATATC+GGG | + | chr1.3:2213800-2213819 | None:intergenic | 30.0% | |
| AATTTGTGGCTATCAATAGA+TGG | + | chr1.3:2214702-2214721 | None:intergenic | 30.0% | |
| ACAACATTAATGCCAAATCT+TGG | - | chr1.3:2213821-2213840 | MS.gene27009:intron | 30.0% | |
| ACTAAACCAAAAACCCAAAA+AGG | - | chr1.3:2210475-2210494 | MS.gene27009:CDS | 30.0% | |
| ACTTACAATTAAACCAACGT+CGG | + | chr1.3:2213326-2213345 | None:intergenic | 30.0% | |
| AGTATAGCTTAGATGGTAAA+AGG | - | chr1.3:2211485-2211504 | MS.gene27009:intron | 30.0% | |
| ATATACTCAAACTCAGATTG+AGG | + | chr1.3:2215014-2215033 | None:intergenic | 30.0% | |
| ATCAACATTATCTTCTTTCC+TGG | - | chr1.3:2212526-2212545 | MS.gene27009:intron | 30.0% | |
| ATTCTTCAACAATCAGAGAA+GGG | - | chr1.3:2214452-2214471 | MS.gene27009:intron | 30.0% | |
| ATTGAAGGATTGAATCAACA+AGG | - | chr1.3:2212803-2212822 | MS.gene27009:intron | 30.0% | |
| CACAATCTTCACTAAAATCA+TGG | + | chr1.3:2213509-2213528 | None:intergenic | 30.0% | |
| CAGCTATATGGTTTAAAAGA+TGG | + | chr1.3:2213984-2214003 | None:intergenic | 30.0% | |
| CATTGTAATGTTAGAGGATT+TGG | - | chr1.3:2211160-2211179 | MS.gene27009:intron | 30.0% | |
| GAAGCAATTTATTCACGAAA+TGG | + | chr1.3:2212019-2212038 | None:intergenic | 30.0% | |
| GGAAAGAATAAAGAACAAAC+AGG | + | chr1.3:2214726-2214745 | None:intergenic | 30.0% | |
| GTGATTATTTATGCTGATGA+AGG | - | chr1.3:2210620-2210639 | MS.gene27009:CDS | 30.0% | |
| TAAGTTGTACAGATTCACAT+TGG | - | chr1.3:2212401-2212420 | MS.gene27009:intron | 30.0% | |
| TACAAGATAGTAATACGGAA+GGG | + | chr1.3:2215211-2215230 | None:intergenic | 30.0% | |
| TACCATCTAAGCTATACTTA+CGG | + | chr1.3:2211483-2211502 | None:intergenic | 30.0% | |
| TATACTCAAACTCAGATTGA+GGG | + | chr1.3:2215013-2215032 | None:intergenic | 30.0% | |
| TCTCTCAGTTCAATTAATGT+TGG | - | chr1.3:2212838-2212857 | MS.gene27009:intron | 30.0% | |
| TGAAGGAAAAGATACGTTAT+TGG | - | chr1.3:2210637-2210656 | MS.gene27009:intron | 30.0% | |
| TGGAGTTTCATAGTAAGAAT+AGG | - | chr1.3:2210657-2210676 | MS.gene27009:intron | 30.0% | |
| TGTGAAATGAAATGCTATGA+AGG | + | chr1.3:2215518-2215537 | None:intergenic | 30.0% | |
| TTAAATGAGAGAAATGAAGG+TGG | + | chr1.3:2210239-2210258 | None:intergenic | 30.0% | |
| TTACAAGATAGTAATACGGA+AGG | + | chr1.3:2215212-2215231 | None:intergenic | 30.0% | |
| TTTACTTCTTACTTGAGGAA+TGG | - | chr1.3:2210722-2210741 | MS.gene27009:intron | 30.0% | |
| TTTGAAAAGCAGTATAAGCA+TGG | + | chr1.3:2211679-2211698 | None:intergenic | 30.0% | |
| ! | GATGAAGTTAATCTTGTTGT+AGG | - | chr1.3:2213721-2213740 | MS.gene27009:intron | 30.0% |
| ! | TCATTCTAATTCTGTTTTGC+AGG | - | chr1.3:2214892-2214911 | MS.gene27009:intron | 30.0% |
| ! | TTATCATTTCCCTCATGTTT+TGG | - | chr1.3:2214847-2214866 | MS.gene27009:intron | 30.0% |
| ! | TTGTTATTCGTTTGTGTTGT+TGG | + | chr1.3:2210325-2210344 | None:intergenic | 30.0% |
| ! | TTTCCTCTTTCTTTTGCTTT+TGG | - | chr1.3:2214741-2214760 | MS.gene27009:intron | 30.0% |
| ! | TTTGTGAGGTTCTTTTGTTA+AGG | + | chr1.3:2210399-2210418 | None:intergenic | 30.0% |
| ! | TTTGTGTTGTTGGAATTTGA+AGG | + | chr1.3:2210315-2210334 | None:intergenic | 30.0% |
| ! | TTTTAGTCAAATGCTTGGAA+GGG | - | chr1.3:2214626-2214645 | MS.gene27009:intron | 30.0% |
| ! | TTTTTAATCTTTCAGGGTCT+TGG | - | chr1.3:2214022-2214041 | MS.gene27009:intron | 30.0% |
| !! | GATTTTAGTGAAGATTGTGA+AGG | - | chr1.3:2213510-2213529 | MS.gene27009:intron | 30.0% |
| !! | GTGTTTTTACTTCTTACTTG+AGG | - | chr1.3:2210717-2210736 | MS.gene27009:intron | 30.0% |
| !! | TAATAAGTACTGAAAAGTGG+GGG | + | chr1.3:2211557-2211576 | None:intergenic | 30.0% |
| !! | TCAAGTGTGTCACTTAATAT+GGG | + | chr1.3:2211206-2211225 | None:intergenic | 30.0% |
| !! | TCCTATTATTTTGTAAAGGG+AGG | - | chr1.3:2215043-2215062 | MS.gene27009:intron | 30.0% |
| !! | TTTTTAGTCAAATGCTTGGA+AGG | - | chr1.3:2214625-2214644 | MS.gene27009:intron | 30.0% |
| !!! | ATTTTTTGAGGCATCTAAGA+AGG | - | chr1.3:2214050-2214069 | MS.gene27009:intron | 30.0% |
| !!! | CAAGTTTTTAGTCAAATGCT+TGG | - | chr1.3:2214621-2214640 | MS.gene27009:intron | 30.0% |
| !!! | CAATTTCCTTTTTGGGTTTT+TGG | + | chr1.3:2210484-2210503 | None:intergenic | 30.0% |
| !!! | GACCAATGTTTTTAAAACTG+AGG | + | chr1.3:2211793-2211812 | None:intergenic | 30.0% |
| !!! | GTTTTTGAGTTCATCATAGT+TGG | - | chr1.3:2211125-2211144 | MS.gene27009:intron | 30.0% |
| !!! | TGCCTCAGTTTTAAAAACAT+TGG | - | chr1.3:2211788-2211807 | MS.gene27009:intron | 30.0% |
| !!! | TGGAATTTGAAGGTTTTTTG+TGG | + | chr1.3:2210305-2210324 | None:intergenic | 30.0% |
| AACAGGTTTACTTGAAGTTG+TGG | - | chr1.3:2214193-2214212 | MS.gene27009:intron | 35.0% | |
| AACCACAACTAATACTTTCC+AGG | + | chr1.3:2212547-2212566 | None:intergenic | 35.0% | |
| AATACTTGATTGCATCTCTC+TGG | - | chr1.3:2212749-2212768 | MS.gene27009:intron | 35.0% | |
| AATAGGTTTAATGCGAAACG+TGG | - | chr1.3:2210674-2210693 | MS.gene27009:intron | 35.0% | |
| ACAGGTTTACTTGAAGTTGT+GGG | - | chr1.3:2214194-2214213 | MS.gene27009:intron | 35.0% | |
| ACAGTTCTGTAGTCATTTAC+AGG | + | chr1.3:2214118-2214137 | None:intergenic | 35.0% | |
| ACATGAGGGAAATGATAAGT+TGG | + | chr1.3:2214845-2214864 | None:intergenic | 35.0% | |
| ACCATCTAAGCTATACTTAC+GGG | + | chr1.3:2211482-2211501 | None:intergenic | 35.0% | |
| ACTTCATATCAATGGTTGAG+AGG | + | chr1.3:2214527-2214546 | None:intergenic | 35.0% | |
| ATACATTTAGCCCCTGAAAT+GGG | - | chr1.3:2215110-2215129 | MS.gene27009:intron | 35.0% | |
| ATCATAGTTCCAGAGAGATT+TGG | + | chr1.3:2212938-2212957 | None:intergenic | 35.0% | |
| ATTAATTGAACTGAGAGAGC+AGG | + | chr1.3:2212836-2212855 | None:intergenic | 35.0% | |
| CAGTTCTGTAGTCATTTACA+GGG | + | chr1.3:2214117-2214136 | None:intergenic | 35.0% | |
| CATTCTTCAACAATCAGAGA+AGG | - | chr1.3:2214451-2214470 | MS.gene27009:intron | 35.0% | |
| CATTGTACTCCATTCTATGT+TGG | - | chr1.3:2211390-2211409 | MS.gene27009:intron | 35.0% | |
| CCATCATTAGAGACTTCATT+AGG | - | chr1.3:2212775-2212794 | MS.gene27009:intron | 35.0% | |
| CCTAATGAAGTCTCTAATGA+TGG | + | chr1.3:2212778-2212797 | None:intergenic | 35.0% | |
| CGAGATGTTAAAGGAGATAA+GGG | - | chr1.3:2215644-2215663 | MS.gene27009:CDS | 35.0% | |
| CGGCAAACATTATGTATACA+TGG | + | chr1.3:2214588-2214607 | None:intergenic | 35.0% | |
| CTAGTGTAAAGTAGATGTCA+CGG | - | chr1.3:2213048-2213067 | MS.gene27009:intron | 35.0% | |
| CTTCATTAGGCATGTATTGA+AGG | - | chr1.3:2212788-2212807 | MS.gene27009:intron | 35.0% | |
| GAATCTGTACAACTTACCTA+CGG | + | chr1.3:2212397-2212416 | None:intergenic | 35.0% | |
| GCATTTCTAACAAGCTAATC+TGG | + | chr1.3:2212631-2212650 | None:intergenic | 35.0% | |
| GCCTCCCTTTACAAAATAAT+AGG | + | chr1.3:2215047-2215066 | None:intergenic | 35.0% | |
| GGTAATGTACTCTGTAACTA+AGG | - | chr1.3:2212478-2212497 | MS.gene27009:intron | 35.0% | |
| TCCACATTTCCAACATAGAA+TGG | + | chr1.3:2211402-2211421 | None:intergenic | 35.0% | |
| TCCATTCTATGTTGGAAATG+TGG | - | chr1.3:2211398-2211417 | MS.gene27009:intron | 35.0% | |
| TTCTTCAACAATCAGAGAAG+GGG | - | chr1.3:2214453-2214472 | MS.gene27009:intron | 35.0% | |
| TTTGTCCAAGTGAAATTCGT+TGG | - | chr1.3:2213638-2213657 | MS.gene27009:intron | 35.0% | |
| ! | ATGGCTCTGTTTGGATAAAT+AGG | - | chr1.3:2210813-2210832 | MS.gene27009:intron | 35.0% |
| ! | ATTATTGGAAAAGCGCGTTT+CGG | + | chr1.3:2210267-2210286 | None:intergenic | 35.0% |
| ! | CCTCAAGTTTCTTTTCCTTT+GGG | + | chr1.3:2215406-2215425 | None:intergenic | 35.0% |
| ! | GCTTTTCAAATGCTAGAATC+CGG | - | chr1.3:2211689-2211708 | MS.gene27009:intron | 35.0% |
| ! | GGGAATTTGGTTCCTTTAAA+GGG | - | chr1.3:2214473-2214492 | MS.gene27009:intron | 35.0% |
| ! | TACTTTTCATAGTACCCAGT+CGG | - | chr1.3:2215570-2215589 | MS.gene27009:CDS | 35.0% |
| ! | TATTTCTGTCCAAATCTCTC+TGG | - | chr1.3:2212926-2212945 | MS.gene27009:intron | 35.0% |
| ! | TCCTCAAGTTTCTTTTCCTT+TGG | + | chr1.3:2215407-2215426 | None:intergenic | 35.0% |
| ! | TCTTTTGTTAAGGCTGTTGA+TGG | + | chr1.3:2210389-2210408 | None:intergenic | 35.0% |
| ! | TGGCTCTGTTTGGATAAATA+GGG | - | chr1.3:2210814-2210833 | MS.gene27009:intron | 35.0% |
| ! | TTATTGCAGAAAGCGTATCA+TGG | - | chr1.3:2215617-2215636 | MS.gene27009:CDS | 35.0% |
| ! | TTTAAGACTAATCAAGCCGT+AGG | - | chr1.3:2212378-2212397 | MS.gene27009:intron | 35.0% |
| ! | TTTGATGTTATGGCTCTGTT+TGG | - | chr1.3:2210804-2210823 | MS.gene27009:intron | 35.0% |
| !! | AAAACCAAGCTCTGAAGTTT+CGG | - | chr1.3:2215355-2215374 | MS.gene27009:CDS | 35.0% |
| !! | ACGGCTTGATTAGTCTTAAA+TGG | + | chr1.3:2212378-2212397 | None:intergenic | 35.0% |
| !! | CGTTGAAGAGAGATTTTGAT+GGG | - | chr1.3:2210561-2210580 | MS.gene27009:CDS | 35.0% |
| !! | GAATTGATGACAGTTTTGTC+CGG | + | chr1.3:2211711-2211730 | None:intergenic | 35.0% |
| !! | GGTACTCGTTTGATTAGTTT+GGG | + | chr1.3:2214413-2214432 | None:intergenic | 35.0% |
| !! | GTCAAGTGTGTCACTTAATA+TGG | + | chr1.3:2211207-2211226 | None:intergenic | 35.0% |
| !! | TGTTGATACAGTAGTTCTGA+AGG | + | chr1.3:2212513-2212532 | None:intergenic | 35.0% |
| !! | TTAGCTTGTTAGAAATGCCA+CGG | - | chr1.3:2212633-2212652 | MS.gene27009:CDS | 35.0% |
| !! | TTCCTGGAAAGTATTAGTTG+TGG | - | chr1.3:2212542-2212561 | MS.gene27009:intron | 35.0% |
| !! | TTGGATTTTGAGTCAAAAGC+AGG | - | chr1.3:2214760-2214779 | MS.gene27009:intron | 35.0% |
| !!! | AGGTTTTTTGTGGAAGTTGA+AGG | + | chr1.3:2210295-2210314 | None:intergenic | 35.0% |
| !!! | GTGTTGGTTTTTCTAGTCAT+GGG | + | chr1.3:2214372-2214391 | None:intergenic | 35.0% |
| !!! | GTTTTTTTCCTATTATGCCG+TGG | + | chr1.3:2212653-2212672 | None:intergenic | 35.0% |
| !!! | TACCTTTTGCTGTTCACTAT+TGG | + | chr1.3:2214285-2214304 | None:intergenic | 35.0% |
| !!! | TGTGTTGGTTTTTCTAGTCA+TGG | + | chr1.3:2214373-2214392 | None:intergenic | 35.0% |
| !!! | TGTTGGTTTTTCTAGTCATG+GGG | + | chr1.3:2214371-2214390 | None:intergenic | 35.0% |
| !!! | TTGTTACAGGTTTTGGTTCA+TGG | - | chr1.3:2213253-2213272 | MS.gene27009:CDS | 35.0% |
| AACCACTCATCAACATTCCA+CGG | + | chr1.3:2213418-2213437 | None:intergenic | 40.0% | |
| AATGAGAGAAATGAAGGTGG+TGG | + | chr1.3:2210236-2210255 | None:intergenic | 40.0% | |
| ACAATCAGAGAAGGGGAATT+TGG | - | chr1.3:2214460-2214479 | MS.gene27009:intron | 40.0% | |
| ACAGTTGTGAAAAGCAAACG+GGG | - | chr1.3:2212206-2212225 | MS.gene27009:intron | 40.0% | |
| ACTGAACTGGTGTGAACATT+AGG | - | chr1.3:2211653-2211672 | MS.gene27009:intron | 40.0% | |
| ACTTGGTCGAAGAATTTGTG+AGG | + | chr1.3:2210413-2210432 | None:intergenic | 40.0% | |
| AGTAGGAAACTACATACCTC+TGG | + | chr1.3:2214986-2215005 | None:intergenic | 40.0% | |
| ATTATGAGAATTGGCAGCGA+TGG | - | chr1.3:2215317-2215336 | MS.gene27009:CDS | 40.0% | |
| CAACAATGTATGGTCGTTCA+AGG | + | chr1.3:2214943-2214962 | None:intergenic | 40.0% | |
| CACAGTTGTGAAAAGCAAAC+GGG | - | chr1.3:2212205-2212224 | MS.gene27009:intron | 40.0% | |
| CACCAATAGTGAACAGCAAA+AGG | - | chr1.3:2214280-2214299 | MS.gene27009:intron | 40.0% | |
| CATACATTTAGCCCCTGAAA+TGG | - | chr1.3:2215109-2215128 | MS.gene27009:intron | 40.0% | |
| CATGGTTAGCGAGATGTTAA+AGG | - | chr1.3:2215635-2215654 | MS.gene27009:CDS | 40.0% | |
| CCCAAAGGAAAAGAAACTTG+AGG | - | chr1.3:2215403-2215422 | MS.gene27009:CDS | 40.0% | |
| CTAACTCCAATAACAGAGTG+AGG | + | chr1.3:2215440-2215459 | None:intergenic | 40.0% | |
| GAAGATTGTGAAGGATAGTG+TGG | - | chr1.3:2213519-2213538 | MS.gene27009:intron | 40.0% | |
| GCAAACAAACCTAAAGGAAC+AGG | + | chr1.3:2210773-2210792 | None:intergenic | 40.0% | |
| GCACAGTTGTGAAAAGCAAA+CGG | - | chr1.3:2212204-2212223 | MS.gene27009:intron | 40.0% | |
| GCGAGATGTTAAAGGAGATA+AGG | - | chr1.3:2215643-2215662 | MS.gene27009:CDS | 40.0% | |
| GGGTCTTTGATACTTCCAAT+GGG | - | chr1.3:2210581-2210600 | MS.gene27009:CDS | 40.0% | |
| GTGAAAGACTGCTTTGTAGA+AGG | - | chr1.3:2213672-2213691 | MS.gene27009:CDS | 40.0% | |
| GTTCGTATTCCTGTTCCTTT+AGG | - | chr1.3:2210761-2210780 | MS.gene27009:intron | 40.0% | |
| GTTGTACAGATTCACATTGG+TGG | - | chr1.3:2212404-2212423 | MS.gene27009:intron | 40.0% | |
| GTTGTGGTTTACACCTATCT+TGG | - | chr1.3:2212558-2212577 | MS.gene27009:intron | 40.0% | |
| TAACGTGATGAGAGATGACT+CGG | - | chr1.3:2212688-2212707 | MS.gene27009:intron | 40.0% | |
| TACAGCCAACGAATTTCACT+TGG | + | chr1.3:2213646-2213665 | None:intergenic | 40.0% | |
| TACTTGAAGTTGTGGGTGTT+TGG | - | chr1.3:2214201-2214220 | MS.gene27009:intron | 40.0% | |
| TAGAAATGCCACGGCATAAT+AGG | - | chr1.3:2212642-2212661 | MS.gene27009:CDS | 40.0% | |
| TAGCTTAGATGGTAAAAGGC+TGG | - | chr1.3:2211489-2211508 | MS.gene27009:intron | 40.0% | |
| TATGGTCGTTCAAGGTAATC+AGG | + | chr1.3:2214935-2214954 | None:intergenic | 40.0% | |
| TCCCGTAAGTATAGCTTAGA+TGG | - | chr1.3:2211478-2211497 | MS.gene27009:intron | 40.0% | |
| TCTTTGATACTTCCAATGGG+TGG | - | chr1.3:2210584-2210603 | MS.gene27009:CDS | 40.0% | |
| TGATGAAGTTCTTGTTGCGA+GGG | - | chr1.3:2212259-2212278 | MS.gene27009:intron | 40.0% | |
| TGCTTGGAAGGGAGTTTAAT+TGG | - | chr1.3:2214637-2214656 | MS.gene27009:intron | 40.0% | |
| TGGAGGGACATTTGATATGT+TGG | - | chr1.3:2211509-2211528 | MS.gene27009:intron | 40.0% | |
| TGGGTCTTTGATACTTCCAA+TGG | - | chr1.3:2210580-2210599 | MS.gene27009:CDS | 40.0% | |
| TTAGATGGTAAAAGGCTGGA+GGG | - | chr1.3:2211493-2211512 | MS.gene27009:intron | 40.0% | |
| ! | CGGTACTCGTTTGATTAGTT+TGG | + | chr1.3:2214414-2214433 | None:intergenic | 40.0% |
| ! | GAAACTTCAGAGCTTGGTTT+TGG | + | chr1.3:2215356-2215375 | None:intergenic | 40.0% |
| ! | GCGTTGAAGAGAGATTTTGA+TGG | - | chr1.3:2210560-2210579 | MS.gene27009:CDS | 40.0% |
| ! | GGGGAATTTGGTTCCTTTAA+AGG | - | chr1.3:2214472-2214491 | MS.gene27009:intron | 40.0% |
| ! | GTATTCGTCTGAAGCTACAT+TGG | - | chr1.3:2213880-2213899 | MS.gene27009:intron | 40.0% |
| ! | GTTTCTACATCTAGAACCCA+AGG | - | chr1.3:2215140-2215159 | MS.gene27009:intron | 40.0% |
| ! | TGAACAGCAAAAGGTATGCT+AGG | - | chr1.3:2214289-2214308 | MS.gene27009:intron | 40.0% |
| ! | TTATTGGAAAAGCGCGTTTC+GGG | + | chr1.3:2210266-2210285 | None:intergenic | 40.0% |
| ! | TTTGTTAAGGCTGTTGATGG+TGG | + | chr1.3:2210386-2210405 | None:intergenic | 40.0% |
| !! | AAATTTTGACCTAAGCCGAC+TGG | + | chr1.3:2215588-2215607 | None:intergenic | 40.0% |
| !! | AATTTTGACCTAAGCCGACT+GGG | + | chr1.3:2215587-2215606 | None:intergenic | 40.0% |
| !! | CTAGTGTTGCTTCTATGTGA+AGG | - | chr1.3:2211041-2211060 | MS.gene27009:intron | 40.0% |
| !! | CTTATAGAAGGTGCTCACTT+GGG | - | chr1.3:2213917-2213936 | MS.gene27009:intron | 40.0% |
| !! | CTTCCAATTAGTGGTGTTAC+AGG | - | chr1.3:2210951-2210970 | MS.gene27009:CDS | 40.0% |
| !! | GATGTGTTCTAAAGCATGAG+TGG | - | chr1.3:2213543-2213562 | MS.gene27009:intron | 40.0% |
| !! | GATTTGCCTGGTCTTATAGA+AGG | - | chr1.3:2213905-2213924 | MS.gene27009:intron | 40.0% |
| !! | GTGTGTCACTTAATATGGGA+CGG | + | chr1.3:2211202-2211221 | None:intergenic | 40.0% |
| !! | TCTTATAGAAGGTGCTCACT+TGG | - | chr1.3:2213916-2213935 | MS.gene27009:intron | 40.0% |
| !! | TTTGGGATTTTTGTGCGTTG+AGG | + | chr1.3:2214396-2214415 | None:intergenic | 40.0% |
| !!! | GTCTTGGTCGCAATTTTTTG+AGG | - | chr1.3:2214038-2214057 | MS.gene27009:intron | 40.0% |
| !!! | GTTGGTTTTTCTAGTCATGG+GGG | + | chr1.3:2214370-2214389 | None:intergenic | 40.0% |
| !!! | TTTTGGTTCATGGTCAACCT+GGG | - | chr1.3:2213263-2213282 | MS.gene27009:CDS | 40.0% |
| AAACAGAGCCTCCCATTTCA+GGG | + | chr1.3:2215124-2215143 | None:intergenic | 45.0% | |
| ACTAGAAACCAACGGTTCCT+TGG | + | chr1.3:2215694-2215713 | None:intergenic | 45.0% | |
| AGGTTTAATGCGAAACGTGG+TGG | - | chr1.3:2210677-2210696 | MS.gene27009:intron | 45.0% | |
| ATACTTCCAATGGGTGGTCA+TGG | - | chr1.3:2210590-2210609 | MS.gene27009:CDS | 45.0% | |
| ATCAACGCACTGCCTTAAAG+CGG | + | chr1.3:2215670-2215689 | None:intergenic | 45.0% | |
| ATCATTGCGGAGTCTAGTGA+GGG | - | chr1.3:2215085-2215104 | MS.gene27009:intron | 45.0% | |
| ATGGTAAAGTAGACGCCATG+TGG | + | chr1.3:2215174-2215193 | None:intergenic | 45.0% | |
| CAAGTAATCATCACCGTTCG+TGG | - | chr1.3:2210428-2210447 | MS.gene27009:intron | 45.0% | |
| CACGAACGGTGATGATTACT+TGG | + | chr1.3:2210430-2210449 | None:intergenic | 45.0% | |
| CAGTAGATGCGTCAACAACA+TGG | + | chr1.3:2214090-2214109 | None:intergenic | 45.0% | |
| CGCAACAAGAACTTCATCAC+CGG | + | chr1.3:2212258-2212277 | None:intergenic | 45.0% | |
| CTAACCATACATGGCCAAAG+TGG | + | chr1.3:2211979-2211998 | None:intergenic | 45.0% | |
| CTCAGATTGAGGGTAGTAGT+AGG | + | chr1.3:2215003-2215022 | None:intergenic | 45.0% | |
| CTTACCACTTTGGCCATGTA+TGG | - | chr1.3:2211972-2211991 | MS.gene27009:intron | 45.0% | |
| CTTAGATGGTAAAAGGCTGG+AGG | - | chr1.3:2211492-2211511 | MS.gene27009:intron | 45.0% | |
| GAATAAGATTGACCTGCCAG+AGG | - | chr1.3:2214967-2214986 | MS.gene27009:intron | 45.0% | |
| GACTGAAGAAAGTGACCCAA+AGG | - | chr1.3:2215388-2215407 | MS.gene27009:CDS | 45.0% | |
| GATGAAGTTCTTGTTGCGAG+GGG | - | chr1.3:2212260-2212279 | MS.gene27009:intron | 45.0% | |
| GCAACAAGAACTTCATCACC+GGG | + | chr1.3:2212257-2212276 | None:intergenic | 45.0% | |
| GCACCTGTAACACCACTAAT+TGG | + | chr1.3:2210957-2210976 | None:intergenic | 45.0% | |
| GGAACAGGAATACGAACAGT+AGG | + | chr1.3:2210758-2210777 | None:intergenic | 45.0% | |
| GTCACTTAATATGGGACGGA+GGG | + | chr1.3:2211198-2211217 | None:intergenic | 45.0% | |
| GTGATGAAGTTCTTGTTGCG+AGG | - | chr1.3:2212258-2212277 | MS.gene27009:intron | 45.0% | |
| TAATACGGAAGGGTGAGCTT+TGG | + | chr1.3:2215201-2215220 | None:intergenic | 45.0% | |
| TCACTAGACTCCGCAATGAT+GGG | + | chr1.3:2215085-2215104 | None:intergenic | 45.0% | |
| TGAGCACCTTCTATAAGACC+AGG | + | chr1.3:2213914-2213933 | None:intergenic | 45.0% | |
| TGGTAGTTGCGTAGGGTTTA+AGG | + | chr1.3:2210366-2210385 | None:intergenic | 45.0% | |
| TGTAGGGACTTCCAAATGCT+GGG | - | chr1.3:2213738-2213757 | MS.gene27009:intron | 45.0% | |
| TGTGGCACACTAGAAACCAA+CGG | + | chr1.3:2215702-2215721 | None:intergenic | 45.0% | |
| TTGTAGGGACTTCCAAATGC+TGG | - | chr1.3:2213737-2213756 | MS.gene27009:intron | 45.0% | |
| ! | AACCGTGGAATGTTGATGAG+TGG | - | chr1.3:2213413-2213432 | MS.gene27009:intron | 45.0% |
| ! | GATGAGAGATGACTCGGATA+AGG | - | chr1.3:2212694-2212713 | MS.gene27009:intron | 45.0% |
| ! | GGTGGTAATGTTGATGCTGT+TGG | - | chr1.3:2210695-2210714 | MS.gene27009:intron | 45.0% |
| ! | TGTCACTTAATATGGGACGG+AGG | + | chr1.3:2211199-2211218 | None:intergenic | 45.0% |
| ! | TTAGCTGATTTAGCACGACC+CGG | - | chr1.3:2212236-2212255 | MS.gene27009:intron | 45.0% |
| ! | TTTGGTTCATGGTCAACCTG+GGG | - | chr1.3:2213264-2213283 | MS.gene27009:CDS | 45.0% |
| ! | TTTTGTGCGTTGAGGTGTGT+TGG | + | chr1.3:2214388-2214407 | None:intergenic | 45.0% |
| !! | AGCGTTGATTTCCCAGCATT+TGG | + | chr1.3:2213752-2213771 | None:intergenic | 45.0% |
| !! | CTTGATGGTGATCCCAACTT+GGG | - | chr1.3:2213848-2213867 | MS.gene27009:intron | 45.0% |
| !! | GTCTGCATCGTTTTTGCAGT+GGG | + | chr1.3:2214331-2214350 | None:intergenic | 45.0% |
| !! | TCTGCATCGTTTTTGCAGTG+GGG | + | chr1.3:2214330-2214349 | None:intergenic | 45.0% |
| !! | TGTCTGCATCGTTTTTGCAG+TGG | + | chr1.3:2214332-2214351 | None:intergenic | 45.0% |
| !! | TTGATGGTGGTAGTTGCGTA+GGG | + | chr1.3:2210373-2210392 | None:intergenic | 45.0% |
| !!! | GTTTTGGTTCATGGTCAACC+TGG | - | chr1.3:2213262-2213281 | MS.gene27009:CDS | 45.0% |
| AACAACATGGACCAGTAGCC+GGG | + | chr1.3:2214077-2214096 | None:intergenic | 50.0% | |
| AACAGAGCCTCCCATTTCAG+GGG | + | chr1.3:2215123-2215142 | None:intergenic | 50.0% | |
| ACCTGGGGAGGAAGTTAAGT+TGG | - | chr1.3:2213279-2213298 | MS.gene27009:CDS | 50.0% | |
| ATACATCCCTGCTCCCAAGT+TGG | + | chr1.3:2213864-2213883 | None:intergenic | 50.0% | |
| ATCGGGTTTCGCAAGCGTAA+TGG | + | chr1.3:2213783-2213802 | None:intergenic | 50.0% | |
| CAACAACATGGACCAGTAGC+CGG | + | chr1.3:2214078-2214097 | None:intergenic | 50.0% | |
| CATCATTGCGGAGTCTAGTG+AGG | - | chr1.3:2215084-2215103 | MS.gene27009:intron | 50.0% | |
| CATTTAGCCCCTGAAATGGG+AGG | - | chr1.3:2215113-2215132 | MS.gene27009:intron | 50.0% | |
| CCAAATCTTGGACGCCTTGA+TGG | - | chr1.3:2213833-2213852 | MS.gene27009:intron | 50.0% | |
| CCAATAACAGAGTGAGGTCG+TGG | + | chr1.3:2215434-2215453 | None:intergenic | 50.0% | |
| CCACGACCTCACTCTGTTAT+TGG | - | chr1.3:2215431-2215450 | MS.gene27009:CDS | 50.0% | |
| CTCACTAGACTCCGCAATGA+TGG | + | chr1.3:2215086-2215105 | None:intergenic | 50.0% | |
| GAAACAGAGCCTCCCATTTC+AGG | + | chr1.3:2215125-2215144 | None:intergenic | 50.0% | |
| GCTACATTGGCAGATTTGCC+TGG | - | chr1.3:2213893-2213912 | MS.gene27009:intron | 50.0% | |
| GGAAACTACATACCTCTGGC+AGG | + | chr1.3:2214982-2215001 | None:intergenic | 50.0% | |
| GTAATCATCACCGTTCGTGG+CGG | - | chr1.3:2210431-2210450 | MS.gene27009:intron | 50.0% | |
| TACATCCCTGCTCCCAAGTT+GGG | + | chr1.3:2213863-2213882 | None:intergenic | 50.0% | |
| TCCAACTTAACTTCCTCCCC+AGG | + | chr1.3:2213283-2213302 | None:intergenic | 50.0% | |
| TGAGCCGAAACTTCAGAGCT+TGG | + | chr1.3:2215362-2215381 | None:intergenic | 50.0% | |
| TGCTGGGAAATCAACGCTTC+TGG | - | chr1.3:2213754-2213773 | MS.gene27009:intron | 50.0% | |
| ! | AGGAGATAAGGGCCGCTTTA+AGG | - | chr1.3:2215655-2215674 | MS.gene27009:CDS | 50.0% |
| ! | CCAAGTTGGGATCACCATCA+AGG | + | chr1.3:2213850-2213869 | None:intergenic | 50.0% |
| ! | CCATCAAGGCGTCCAAGATT+TGG | + | chr1.3:2213836-2213855 | None:intergenic | 50.0% |
| ! | TCATAGTACCCAGTCGGCTT+AGG | - | chr1.3:2215576-2215595 | MS.gene27009:CDS | 50.0% |
| ! | TGAGGCATCTAAGAAGGACC+CGG | - | chr1.3:2214056-2214075 | MS.gene27009:intron | 50.0% |
| !! | AAGGCAGTGCGTTGATTCCA+AGG | - | chr1.3:2215674-2215693 | MS.gene27009:CDS | 50.0% |
| !! | AGAAGGTGCTCACTTGGGAA+AGG | - | chr1.3:2213922-2213941 | MS.gene27009:intron | 50.0% |
| !! | CCTTGATGGTGATCCCAACT+TGG | - | chr1.3:2213847-2213866 | MS.gene27009:intron | 50.0% |
| !! | CGTTGATTCCAAGGAACCGT+TGG | - | chr1.3:2215683-2215702 | MS.gene27009:CDS | 50.0% |
| !! | GTTGATGGTGGTAGTTGCGT+AGG | + | chr1.3:2210374-2210393 | None:intergenic | 50.0% |
| AAAGGGAGGCTCAGTGCATG+AGG | - | chr1.3:2215057-2215076 | MS.gene27009:intron | 55.0% | |
| AAAGTAGACGCCATGTGGCG+AGG | + | chr1.3:2215169-2215188 | None:intergenic | 55.0% | |
| CTACGAGTTGTAGCCGACGT+TGG | - | chr1.3:2213310-2213329 | MS.gene27009:intron | 55.0% | |
| CTTCCAATGGGTGGTCATGG+TGG | - | chr1.3:2210593-2210612 | MS.gene27009:CDS | 55.0% | |
| GAAGTTCTTGTTGCGAGGGG+TGG | - | chr1.3:2212263-2212282 | MS.gene27009:intron | 55.0% | |
| GCATGAGGCTCCCATCATTG+CGG | - | chr1.3:2215072-2215091 | MS.gene27009:intron | 55.0% | |
| GTGATCCCAACTTGGGAGCA+GGG | - | chr1.3:2213855-2213874 | MS.gene27009:intron | 55.0% | |
| TCACCACCATGACCACCCAT+TGG | + | chr1.3:2210599-2210618 | None:intergenic | 55.0% | |
| TCTAAGAAGGACCCGGCTAC+TGG | - | chr1.3:2214063-2214082 | MS.gene27009:intron | 55.0% | |
| ! | AAGGGTGAGCTTTGGCGCAA+TGG | + | chr1.3:2215193-2215212 | None:intergenic | 55.0% |
| ! | CAACGTCGGCTACAACTCGT+AGG | + | chr1.3:2213312-2213331 | None:intergenic | 55.0% |
| CTTGTTGCGAGGGGTGGACA+AGG | - | chr1.3:2212269-2212288 | MS.gene27009:intron | 60.0% | |
| GGTGATCCCAACTTGGGAGC+AGG | - | chr1.3:2213854-2213873 | MS.gene27009:intron | 60.0% | |
| GGTTCATGGTCAACCTGGGG+AGG | - | chr1.3:2213267-2213286 | MS.gene27009:CDS | 60.0% | |
| TTGCGAGGGGTGGACAAGGA+GGG | - | chr1.3:2212273-2212292 | MS.gene27009:intron | 60.0% | |
| ! | ATCACCGTTCGTGGCGGAGA+CGG | - | chr1.3:2210437-2210456 | MS.gene27009:intron | 60.0% |
| ACCACCGTCTCCGCCACGAA+CGG | + | chr1.3:2210444-2210463 | None:intergenic | 65.0% | |
| CCATGTGGCGAGGTGGCCTT+GGG | + | chr1.3:2215159-2215178 | None:intergenic | 65.0% | |
| GTAGACGCCATGTGGCGAGG+TGG | + | chr1.3:2215166-2215185 | None:intergenic | 65.0% | |
| GTTGCGAGGGGTGGACAAGG+AGG | - | chr1.3:2212272-2212291 | MS.gene27009:intron | 65.0% | |
| TGCGAGGGGTGGACAAGGAG+GGG | - | chr1.3:2212274-2212293 | MS.gene27009:intron | 65.0% | |
| CCCAAGGCCACCTCGCCACA+TGG | - | chr1.3:2215156-2215175 | MS.gene27009:CDS | 70.0% | |
| GCCATGTGGCGAGGTGGCCT+TGG | + | chr1.3:2215160-2215179 | None:intergenic | 70.0% | |
| ! | ACCGTTCGTGGCGGAGACGG+TGG | - | chr1.3:2210440-2210459 | MS.gene27009:intron | 70.0% |
| ! | CGTGGCGGAGACGGTGGTCA+CGG | - | chr1.3:2210446-2210465 | MS.gene27009:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 2210212 | 2215725 | 2210212 | ID=MS.gene27009 |
| chr1.3 | mRNA | 2210212 | 2215725 | 2210212 | ID=MS.gene27009.t1;Parent=MS.gene27009 |
| chr1.3 | exon | 2215155 | 2215725 | 2215155 | ID=MS.gene27009.t1.exon1;Parent=MS.gene27009.t1 |
| chr1.3 | CDS | 2215155 | 2215725 | 2215155 | ID=cds.MS.gene27009.t1;Parent=MS.gene27009.t1 |
| chr1.3 | exon | 2213642 | 2213733 | 2213642 | ID=MS.gene27009.t1.exon2;Parent=MS.gene27009.t1 |
| chr1.3 | CDS | 2213642 | 2213733 | 2213642 | ID=cds.MS.gene27009.t1;Parent=MS.gene27009.t1 |
| chr1.3 | exon | 2213222 | 2213305 | 2213222 | ID=MS.gene27009.t1.exon3;Parent=MS.gene27009.t1 |
| chr1.3 | CDS | 2213222 | 2213305 | 2213222 | ID=cds.MS.gene27009.t1;Parent=MS.gene27009.t1 |
| chr1.3 | exon | 2212598 | 2212675 | 2212598 | ID=MS.gene27009.t1.exon4;Parent=MS.gene27009.t1 |
| chr1.3 | CDS | 2212598 | 2212675 | 2212598 | ID=cds.MS.gene27009.t1;Parent=MS.gene27009.t1 |
| chr1.3 | exon | 2211994 | 2212194 | 2211994 | ID=MS.gene27009.t1.exon5;Parent=MS.gene27009.t1 |
| chr1.3 | CDS | 2211994 | 2212194 | 2211994 | ID=cds.MS.gene27009.t1;Parent=MS.gene27009.t1 |
| chr1.3 | exon | 2211793 | 2211900 | 2211793 | ID=MS.gene27009.t1.exon6;Parent=MS.gene27009.t1 |
| chr1.3 | CDS | 2211793 | 2211900 | 2211793 | ID=cds.MS.gene27009.t1;Parent=MS.gene27009.t1 |
| chr1.3 | exon | 2210949 | 2211023 | 2210949 | ID=MS.gene27009.t1.exon7;Parent=MS.gene27009.t1 |
| chr1.3 | CDS | 2210949 | 2211023 | 2210949 | ID=cds.MS.gene27009.t1;Parent=MS.gene27009.t1 |
| chr1.3 | exon | 2210472 | 2210653 | 2210472 | ID=MS.gene27009.t1.exon8;Parent=MS.gene27009.t1 |
| chr1.3 | CDS | 2210472 | 2210653 | 2210472 | ID=cds.MS.gene27009.t1;Parent=MS.gene27009.t1 |
| chr1.3 | exon | 2210212 | 2210311 | 2210212 | ID=MS.gene27009.t1.exon9;Parent=MS.gene27009.t1 |
| chr1.3 | CDS | 2210212 | 2210311 | 2210212 | ID=cds.MS.gene27009.t1;Parent=MS.gene27009.t1 |
| Gene Sequence |
| Protein sequence |
