Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30882.t1 | XP_004497439.1 | 59.9 | 284 | 97 | 6 | 1 | 278 | 1 | 273 | 4.30E-58 | 235 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30882.t1 | A0A1S2Y0M2 | 59.9 | 284 | 97 | 6 | 1 | 278 | 1 | 273 | 3.1e-58 | 235.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene30882 | 0.822498 | 2.29E-53 | -1.69E-46 |
| MS.gene049159 | MS.gene30882 | 0.811665 | 6.25E-51 | -1.69E-46 |
| MS.gene049254 | MS.gene30882 | 0.806133 | 9.54E-50 | -1.69E-46 |
| MS.gene049404 | MS.gene30882 | 0.813816 | 2.11E-51 | -1.69E-46 |
| MS.gene049435 | MS.gene30882 | 0.802186 | 6.32E-49 | -1.69E-46 |
| MS.gene049501 | MS.gene30882 | 0.834475 | 2.93E-56 | -1.69E-46 |
| MS.gene049711 | MS.gene30882 | 0.818342 | 2.06E-52 | -1.69E-46 |
| MS.gene049821 | MS.gene30882 | 0.824126 | 9.56E-54 | -1.69E-46 |
| MS.gene049850 | MS.gene30882 | 0.849815 | 2.54E-60 | -1.69E-46 |
| MS.gene050020 | MS.gene30882 | 0.823107 | 1.66E-53 | -1.69E-46 |
| MS.gene050026 | MS.gene30882 | 0.815289 | 9.98E-52 | -1.69E-46 |
| MS.gene050442 | MS.gene30882 | 0.800411 | 1.46E-48 | -1.69E-46 |
| MS.gene05045 | MS.gene30882 | 0.812732 | 3.66E-51 | -1.69E-46 |
| MS.gene050719 | MS.gene30882 | 0.800264 | 1.56E-48 | -1.69E-46 |
| MS.gene050807 | MS.gene30882 | 0.817756 | 2.80E-52 | -1.69E-46 |
| MS.gene050901 | MS.gene30882 | 0.823821 | 1.13E-53 | -1.69E-46 |
| MS.gene051018 | MS.gene30882 | 0.80291 | 4.48E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene30882 | 0.822783 | 1.97E-53 | -1.69E-46 |
| MS.gene051199 | MS.gene30882 | 0.80477 | 1.84E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene30882 | 0.854784 | 9.77E-62 | -1.69E-46 |
| MS.gene051279 | MS.gene30882 | 0.80944 | 1.89E-50 | -1.69E-46 |
| MS.gene051328 | MS.gene30882 | 0.80875 | 2.66E-50 | -1.69E-46 |
| MS.gene051388 | MS.gene30882 | 0.832617 | 8.53E-56 | -1.69E-46 |
| MS.gene05157 | MS.gene30882 | 0.83699 | 6.77E-57 | -1.69E-46 |
| MS.gene051594 | MS.gene30882 | 0.809168 | 2.16E-50 | -1.69E-46 |
| MS.gene051700 | MS.gene30882 | 0.807402 | 5.14E-50 | -1.69E-46 |
| MS.gene051719 | MS.gene30882 | 0.883998 | 2.79E-71 | -1.69E-46 |
| MS.gene051720 | MS.gene30882 | 0.874232 | 7.93E-68 | -1.69E-46 |
| MS.gene051744 | MS.gene30882 | 0.831285 | 1.82E-55 | -1.69E-46 |
| MS.gene051957 | MS.gene30882 | 0.809787 | 1.59E-50 | -1.69E-46 |
| MS.gene052020 | MS.gene30882 | 0.836168 | 1.10E-56 | -1.69E-46 |
| MS.gene052133 | MS.gene30882 | 0.813218 | 2.86E-51 | -1.69E-46 |
| MS.gene052463 | MS.gene30882 | 0.804185 | 2.44E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene30882 | 0.839723 | 1.34E-57 | -1.69E-46 |
| MS.gene052519 | MS.gene30882 | 0.829787 | 4.23E-55 | -1.69E-46 |
| MS.gene052561 | MS.gene30882 | 0.822574 | 2.20E-53 | -1.69E-46 |
| MS.gene052582 | MS.gene30882 | 0.818684 | 1.72E-52 | -1.69E-46 |
| MS.gene052584 | MS.gene30882 | 0.826678 | 2.38E-54 | -1.69E-46 |
| MS.gene052611 | MS.gene30882 | 0.820674 | 6.06E-53 | -1.69E-46 |
| MS.gene052665 | MS.gene30882 | 0.825748 | 3.96E-54 | -1.69E-46 |
| MS.gene052732 | MS.gene30882 | 0.800195 | 1.61E-48 | -1.69E-46 |
| MS.gene052773 | MS.gene30882 | 0.819932 | 8.96E-53 | -1.69E-46 |
| MS.gene052863 | MS.gene30882 | 0.821435 | 4.04E-53 | -1.69E-46 |
| MS.gene052896 | MS.gene30882 | 0.829881 | 4.02E-55 | -1.69E-46 |
| MS.gene053079 | MS.gene30882 | 0.800171 | 1.63E-48 | -1.69E-46 |
| MS.gene053144 | MS.gene30882 | 0.854577 | 1.12E-61 | -1.69E-46 |
| MS.gene053164 | MS.gene30882 | 0.808143 | 3.58E-50 | -1.69E-46 |
| MS.gene053221 | MS.gene30882 | 0.804748 | 1.86E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene30882 | 0.856477 | 3.13E-62 | -1.69E-46 |
| MS.gene053296 | MS.gene30882 | 0.812396 | 4.33E-51 | -1.69E-46 |
| MS.gene053581 | MS.gene30882 | 0.826932 | 2.07E-54 | -1.69E-46 |
| MS.gene053599 | MS.gene30882 | 0.807379 | 5.20E-50 | -1.69E-46 |
| MS.gene053883 | MS.gene30882 | 0.830342 | 3.10E-55 | -1.69E-46 |
| MS.gene054236 | MS.gene30882 | 0.806751 | 7.07E-50 | -1.69E-46 |
| MS.gene05423 | MS.gene30882 | 0.829287 | 5.60E-55 | -1.69E-46 |
| MS.gene054584 | MS.gene30882 | 0.849166 | 3.85E-60 | -1.69E-46 |
| MS.gene05458 | MS.gene30882 | 0.817993 | 2.47E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene30882 | 0.838848 | 2.25E-57 | -1.69E-46 |
| MS.gene054775 | MS.gene30882 | 0.85375 | 1.94E-61 | -1.69E-46 |
| MS.gene054801 | MS.gene30882 | 0.822074 | 2.88E-53 | -1.69E-46 |
| MS.gene054991 | MS.gene30882 | 0.811335 | 7.37E-51 | -1.69E-46 |
| MS.gene055465 | MS.gene30882 | 0.872419 | 3.23E-67 | -1.69E-46 |
| MS.gene055466 | MS.gene30882 | 0.880418 | 5.58E-70 | -1.69E-46 |
| MS.gene055468 | MS.gene30882 | 0.862923 | 3.59E-64 | -1.69E-46 |
| MS.gene055469 | MS.gene30882 | 0.833738 | 4.49E-56 | -1.69E-46 |
| MS.gene055512 | MS.gene30882 | 0.806231 | 9.09E-50 | -1.69E-46 |
| MS.gene055537 | MS.gene30882 | 0.824241 | 8.98E-54 | -1.69E-46 |
| MS.gene055580 | MS.gene30882 | -0.838359 | 3.01E-57 | -1.69E-46 |
| MS.gene055608 | MS.gene30882 | 0.828335 | 9.52E-55 | -1.69E-46 |
| MS.gene055778 | MS.gene30882 | 0.832896 | 7.28E-56 | -1.69E-46 |
| MS.gene055818 | MS.gene30882 | 0.829873 | 4.03E-55 | -1.69E-46 |
| MS.gene055890 | MS.gene30882 | 0.819232 | 1.29E-52 | -1.69E-46 |
| MS.gene055891 | MS.gene30882 | 0.8227 | 2.06E-53 | -1.69E-46 |
| MS.gene056043 | MS.gene30882 | -0.819838 | 9.41E-53 | -1.69E-46 |
| MS.gene056050 | MS.gene30882 | 0.812019 | 5.23E-51 | -1.69E-46 |
| MS.gene056173 | MS.gene30882 | 0.810165 | 1.32E-50 | -1.69E-46 |
| MS.gene056174 | MS.gene30882 | 0.828931 | 6.83E-55 | -1.69E-46 |
| MS.gene056215 | MS.gene30882 | 0.807683 | 4.48E-50 | -1.69E-46 |
| MS.gene056308 | MS.gene30882 | 0.821084 | 4.87E-53 | -1.69E-46 |
| MS.gene056595 | MS.gene30882 | 0.822306 | 2.54E-53 | -1.69E-46 |
| MS.gene056859 | MS.gene30882 | 0.804558 | 2.04E-49 | -1.69E-46 |
| MS.gene057314 | MS.gene30882 | 0.808764 | 2.64E-50 | -1.69E-46 |
| MS.gene057414 | MS.gene30882 | 0.81224 | 4.68E-51 | -1.69E-46 |
| MS.gene057444 | MS.gene30882 | 0.838583 | 2.64E-57 | -1.69E-46 |
| MS.gene057915 | MS.gene30882 | 0.834467 | 2.95E-56 | -1.69E-46 |
| MS.gene058010 | MS.gene30882 | 0.801538 | 8.59E-49 | -1.69E-46 |
| MS.gene058087 | MS.gene30882 | 0.803409 | 3.53E-49 | -1.69E-46 |
| MS.gene058339 | MS.gene30882 | 0.802266 | 6.09E-49 | -1.69E-46 |
| MS.gene05847 | MS.gene30882 | 0.817076 | 3.98E-52 | -1.69E-46 |
| MS.gene058625 | MS.gene30882 | 0.854743 | 1.00E-61 | -1.69E-46 |
| MS.gene058636 | MS.gene30882 | 0.812362 | 4.41E-51 | -1.69E-46 |
| MS.gene058979 | MS.gene30882 | 0.81869 | 1.72E-52 | -1.69E-46 |
| MS.gene059015 | MS.gene30882 | 0.802339 | 5.88E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene30882 | 0.832119 | 1.13E-55 | -1.69E-46 |
| MS.gene059460 | MS.gene30882 | 0.808603 | 2.86E-50 | -1.69E-46 |
| MS.gene059570 | MS.gene30882 | 0.80127 | 9.75E-49 | -1.69E-46 |
| MS.gene059625 | MS.gene30882 | 0.86665 | 2.44E-65 | -1.69E-46 |
| MS.gene059842 | MS.gene30882 | 0.811292 | 7.53E-51 | -1.69E-46 |
| MS.gene059937 | MS.gene30882 | 0.816527 | 5.28E-52 | -1.69E-46 |
| MS.gene060137 | MS.gene30882 | -0.813 | 3.19E-51 | -1.69E-46 |
| MS.gene060429 | MS.gene30882 | 0.83153 | 1.58E-55 | -1.69E-46 |
| MS.gene060519 | MS.gene30882 | 0.819348 | 1.22E-52 | -1.69E-46 |
| MS.gene060587 | MS.gene30882 | 0.845205 | 4.70E-59 | -1.69E-46 |
| MS.gene060803 | MS.gene30882 | 0.813328 | 2.71E-51 | -1.69E-46 |
| MS.gene060884 | MS.gene30882 | 0.832788 | 7.74E-56 | -1.69E-46 |
| MS.gene060886 | MS.gene30882 | 0.824711 | 6.96E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30882.t1 | MTR_1g067220 | 95.102 | 245 | 7 | 3 | 35 | 278 | 1 | 241 | 6.92e-161 | 447 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30882.t1 | AT2G37300 | 66.667 | 48 | 16 | 0 | 45 | 92 | 13 | 60 | 7.50e-14 | 68.6 |
| MS.gene30882.t1 | AT2G37300 | 66.667 | 48 | 16 | 0 | 45 | 92 | 13 | 60 | 7.50e-14 | 68.6 |
| MS.gene30882.t1 | AT2G37300 | 66.667 | 48 | 16 | 0 | 45 | 92 | 35 | 82 | 8.19e-14 | 68.9 |
| MS.gene30882.t1 | AT2G37300 | 66.667 | 48 | 16 | 0 | 45 | 92 | 35 | 82 | 8.19e-14 | 68.9 |
| MS.gene30882.t1 | AT2G37300 | 66.667 | 48 | 16 | 0 | 45 | 92 | 35 | 82 | 8.19e-14 | 68.9 |
| MS.gene30882.t1 | AT2G37300 | 66.667 | 48 | 16 | 0 | 45 | 92 | 92 | 139 | 3.11e-13 | 68.2 |
Find 32 sgRNAs with CRISPR-Local
Find 50 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGCTTCTGAATAATATT+TGG | 0.158875 | 1.2:+50576400 | None:intergenic |
| TTCAAAGTTCCTTAGGAATA+AGG | 0.235437 | 1.2:-50575905 | MS.gene30882:CDS |
| TAAGGAACAAGCAGAATTAA+TGG | 0.292596 | 1.2:-50576805 | MS.gene30882:CDS |
| AGATTCCTTTGATAATTCTT+TGG | 0.310548 | 1.2:-50576048 | MS.gene30882:CDS |
| AGCAGAATTAATGGCCAATA+AGG | 0.318363 | 1.2:-50576796 | MS.gene30882:intron |
| ATCCTCCAAATCAAAACAAT+TGG | 0.343305 | 1.2:-50576495 | MS.gene30882:CDS |
| TCCTCCAAATCAAAACAATT+GGG | 0.405024 | 1.2:-50576494 | MS.gene30882:CDS |
| GAAAAGCTTCAAAGTTCCTT+AGG | 0.408448 | 1.2:-50575912 | MS.gene30882:CDS |
| CCAAACAGGACCACTATTGC+AGG | 0.439932 | 1.2:-50577026 | MS.gene30882:intron |
| TGAAGCTCTAGATGCATTGA+GGG | 0.457114 | 1.2:-50575943 | MS.gene30882:CDS |
| CCTGCAATAGTGGTCCTGTT+TGG | 0.464615 | 1.2:+50577026 | None:intergenic |
| ACAGGCTTCAAAAGTAGCTA+AGG | 0.474167 | 1.2:-50576823 | MS.gene30882:CDS |
| AAATTCTCAAACTCAGAGCT+TGG | 0.475080 | 1.2:+50576266 | None:intergenic |
| ATTTGAAGAATGATGAAAGC+AGG | 0.488578 | 1.2:-50576247 | MS.gene30882:intron |
| GAGGTTACTAGCAGAGAGAC+AGG | 0.488693 | 1.2:-50576841 | MS.gene30882:CDS |
| TCGGAGTGAGAAGTTACATT+AGG | 0.490921 | 1.2:+50575865 | None:intergenic |
| AACACTGTGGCATGTCTAAG+AGG | 0.493592 | 1.2:-50576864 | MS.gene30882:CDS |
| CAGAATTGTGAAAATTCTTG+TGG | 0.501754 | 1.2:-50576455 | MS.gene30882:CDS |
| CATAACTGCTAACACCAAAC+AGG | 0.505299 | 1.2:-50577040 | MS.gene30882:CDS |
| AATCGTTCGCCTTATTCCTA+AGG | 0.511083 | 1.2:+50575896 | None:intergenic |
| TTGAAGCTCTAGATGCATTG+AGG | 0.524675 | 1.2:-50575944 | MS.gene30882:CDS |
| GGGAGAGATACCTGCAATAG+TGG | 0.525589 | 1.2:+50577016 | None:intergenic |
| AAGAAAATGGAAGTAGATGA+AGG | 0.533758 | 1.2:-50576897 | MS.gene30882:CDS |
| AGAATTGTGAAAATTCTTGT+GGG | 0.556054 | 1.2:-50576454 | MS.gene30882:CDS |
| GCTGTCACATTCACAGTCAC+AGG | 0.564805 | 1.2:+50576017 | None:intergenic |
| AGATGCATTGAGGGTTGCCA+AGG | 0.577687 | 1.2:-50575934 | MS.gene30882:CDS |
| CCTCCAAATCAAAACAATTG+GGG | 0.608612 | 1.2:-50576493 | MS.gene30882:CDS |
| TAATGCCAAAGAATTATCAA+AGG | 0.628211 | 1.2:+50576043 | None:intergenic |
| ATAAGGCGAACGATTCGCGT+TGG | 0.628535 | 1.2:-50575888 | MS.gene30882:CDS |
| ACACTGTGGCATGTCTAAGA+GGG | 0.632958 | 1.2:-50576863 | MS.gene30882:CDS |
| CTGTGGCATGTCTAAGAGGG+AGG | 0.653297 | 1.2:-50576860 | MS.gene30882:CDS |
| AGGTTTGAATTTGAACACTG+TGG | 0.756754 | 1.2:-50576877 | MS.gene30882:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATATTATTACCTTAT+TGG | + | chr1.2:50576198-50576217 | None:intergenic | 10.0% |
| !! | ATTTGCTTCTGAATAATATT+TGG | + | chr1.2:50576580-50576599 | None:intergenic | 20.0% |
| !!! | AGAGAAAGCTTAAATTTTTA+AGG | - | chr1.2:50576436-50576455 | MS.gene30882:CDS | 20.0% |
| ! | AGAATTGTGAAAATTCTTGT+GGG | - | chr1.2:50576523-50576542 | MS.gene30882:CDS | 25.0% |
| ! | CATTGTTACTATCAGTTAAA+AGG | + | chr1.2:50576222-50576241 | None:intergenic | 25.0% |
| ! | GAATGACATTGTTGAATTAT+TGG | - | chr1.2:50576047-50576066 | MS.gene30882:CDS | 25.0% |
| ! | TAATGCCAAAGAATTATCAA+AGG | + | chr1.2:50576937-50576956 | None:intergenic | 25.0% |
| !! | AGATTCCTTTGATAATTCTT+TGG | - | chr1.2:50576929-50576948 | MS.gene30882:intron | 25.0% |
| !! | TGTTTAGAACATCATCATAA+AGG | - | chr1.2:50576266-50576285 | MS.gene30882:CDS | 25.0% |
| !!! | GAAAGTTATTTTTTGACAGT+TGG | - | chr1.2:50576362-50576381 | MS.gene30882:CDS | 25.0% |
| !!! | TGTTGTCAATTTTGGAATTT+TGG | - | chr1.2:50576837-50576856 | MS.gene30882:CDS | 25.0% |
| AAGAAAATGGAAGTAGATGA+AGG | - | chr1.2:50576080-50576099 | MS.gene30882:CDS | 30.0% | |
| ATCCTCCAAATCAAAACAAT+TGG | - | chr1.2:50576482-50576501 | MS.gene30882:CDS | 30.0% | |
| ATTTGAAGAATGATGAAAGC+AGG | - | chr1.2:50576730-50576749 | MS.gene30882:intron | 30.0% | |
| CAGAATTGTGAAAATTCTTG+TGG | - | chr1.2:50576522-50576541 | MS.gene30882:CDS | 30.0% | |
| TAAGGAACAAGCAGAATTAA+TGG | - | chr1.2:50576172-50576191 | MS.gene30882:intron | 30.0% | |
| TCCTCCAAATCAAAACAATT+GGG | - | chr1.2:50576483-50576502 | MS.gene30882:CDS | 30.0% | |
| TTCAAAGTTCCTTAGGAATA+AGG | - | chr1.2:50577072-50577091 | MS.gene30882:CDS | 30.0% | |
| ! | AGAATCACAATCTTTTGATG+TGG | + | chr1.2:50576658-50576677 | None:intergenic | 30.0% |
| ! | TTTGAGCATGTTGTCAATTT+TGG | - | chr1.2:50576829-50576848 | MS.gene30882:CDS | 30.0% |
| !!! | ATTTTGGTGTCATGTTTTTC+AGG | - | chr1.2:50576853-50576872 | MS.gene30882:CDS | 30.0% |
| !!! | GTCTCTGAAACATTTTGATT+TGG | + | chr1.2:50576621-50576640 | None:intergenic | 30.0% |
| !!! | TGGTTTTAACAGCAAGAAAA+TGG | - | chr1.2:50576067-50576086 | MS.gene30882:CDS | 30.0% |
| AAATTCTCAAACTCAGAGCT+TGG | + | chr1.2:50576714-50576733 | None:intergenic | 35.0% | |
| AGCAGAATTAATGGCCAATA+AGG | - | chr1.2:50576181-50576200 | MS.gene30882:intron | 35.0% | |
| AGGTTTGAATTTGAACACTG+TGG | - | chr1.2:50576100-50576119 | MS.gene30882:CDS | 35.0% | |
| CCTCCAAATCAAAACAATTG+GGG | - | chr1.2:50576484-50576503 | MS.gene30882:CDS | 35.0% | |
| GAAAAGCTTCAAAGTTCCTT+AGG | - | chr1.2:50577065-50577084 | MS.gene30882:CDS | 35.0% | |
| ! | TTTTTGACAGTTGGTTGAGT+TGG | - | chr1.2:50576371-50576390 | MS.gene30882:CDS | 35.0% |
| !! | GTTGGTTGAGTTGGAAAAAT+TGG | - | chr1.2:50576380-50576399 | MS.gene30882:CDS | 35.0% |
| !!! | ATGCCCCAATTGTTTTGATT+TGG | + | chr1.2:50576490-50576509 | None:intergenic | 35.0% |
| ACAGGCTTCAAAAGTAGCTA+AGG | - | chr1.2:50576154-50576173 | MS.gene30882:intron | 40.0% | |
| CATAACTGCTAACACCAAAC+AGG | - | chr1.2:50575937-50575956 | MS.gene30882:CDS | 40.0% | |
| ! | AATCGTTCGCCTTATTCCTA+AGG | + | chr1.2:50577084-50577103 | None:intergenic | 40.0% |
| !! | TGAAGCTCTAGATGCATTGA+GGG | - | chr1.2:50577034-50577053 | MS.gene30882:CDS | 40.0% |
| !! | TTGAAGCTCTAGATGCATTG+AGG | - | chr1.2:50577033-50577052 | MS.gene30882:CDS | 40.0% |
| !!! | CCCCAATTGTTTTGATTTGG+AGG | + | chr1.2:50576487-50576506 | None:intergenic | 40.0% |
| !!! | GGAACTTTGAAGCTTTTCCT+TGG | + | chr1.2:50577063-50577082 | None:intergenic | 40.0% |
| AACACTGTGGCATGTCTAAG+AGG | - | chr1.2:50576113-50576132 | MS.gene30882:intron | 45.0% | |
| ACACTGTGGCATGTCTAAGA+GGG | - | chr1.2:50576114-50576133 | MS.gene30882:intron | 45.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | + | chr1.2:50575983-50576002 | None:intergenic | 50.0% | |
| AGATGCATTGAGGGTTGCCA+AGG | - | chr1.2:50577043-50577062 | MS.gene30882:CDS | 50.0% | |
| ATAAGGCGAACGATTCGCGT+TGG | - | chr1.2:50577089-50577108 | MS.gene30882:CDS | 50.0% | |
| CCAAACAGGACCACTATTGC+AGG | - | chr1.2:50575951-50575970 | MS.gene30882:CDS | 50.0% | |
| CCTGCAATAGTGGTCCTGTT+TGG | + | chr1.2:50575954-50575973 | None:intergenic | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+GGG | + | chr1.2:50575984-50576003 | None:intergenic | 50.0% | |
| GAGGTTACTAGCAGAGAGAC+AGG | - | chr1.2:50576136-50576155 | MS.gene30882:intron | 50.0% | |
| GCTGTCACATTCACAGTCAC+AGG | + | chr1.2:50576963-50576982 | None:intergenic | 50.0% | |
| GGGAGAGATACCTGCAATAG+TGG | + | chr1.2:50575964-50575983 | None:intergenic | 50.0% | |
| CTGTGGCATGTCTAAGAGGG+AGG | - | chr1.2:50576117-50576136 | MS.gene30882:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 50575878 | 50577121 | 50575878 | ID=MS.gene30882 |
| chr1.2 | mRNA | 50575878 | 50577121 | 50575878 | ID=MS.gene30882.t1;Parent=MS.gene30882 |
| chr1.2 | exon | 50577027 | 50577121 | 50577027 | ID=MS.gene30882.t1.exon1;Parent=MS.gene30882.t1 |
| chr1.2 | CDS | 50577027 | 50577121 | 50577027 | ID=cds.MS.gene30882.t1;Parent=MS.gene30882.t1 |
| chr1.2 | exon | 50576797 | 50576920 | 50576797 | ID=MS.gene30882.t1.exon2;Parent=MS.gene30882.t1 |
| chr1.2 | CDS | 50576797 | 50576920 | 50576797 | ID=cds.MS.gene30882.t1;Parent=MS.gene30882.t1 |
| chr1.2 | exon | 50576248 | 50576618 | 50576248 | ID=MS.gene30882.t1.exon3;Parent=MS.gene30882.t1 |
| chr1.2 | CDS | 50576248 | 50576618 | 50576248 | ID=cds.MS.gene30882.t1;Parent=MS.gene30882.t1 |
| chr1.2 | exon | 50575878 | 50576124 | 50575878 | ID=MS.gene30882.t1.exon4;Parent=MS.gene30882.t1 |
| chr1.2 | CDS | 50575878 | 50576124 | 50575878 | ID=cds.MS.gene30882.t1;Parent=MS.gene30882.t1 |
| Gene Sequence |
| Protein sequence |
