Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39143.t1 | XP_013442577.1 | 97.4 | 344 | 9 | 0 | 1 | 344 | 1 | 344 | 7.50E-193 | 682.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39143.t1 | O95433 | 33.3 | 351 | 209 | 8 | 1 | 343 | 1 | 334 | 9.9e-45 | 182.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39143.t1 | A0A072TGU9 | 97.4 | 344 | 9 | 0 | 1 | 344 | 1 | 344 | 5.4e-193 | 682.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene39143 | 0.851934 | 6.42E-61 | -1.69E-46 |
| MS.gene049159 | MS.gene39143 | 0.817077 | 3.98E-52 | -1.69E-46 |
| MS.gene049350 | MS.gene39143 | 0.803084 | 4.13E-49 | -1.69E-46 |
| MS.gene049368 | MS.gene39143 | 0.827341 | 1.65E-54 | -1.69E-46 |
| MS.gene049807 | MS.gene39143 | 0.801671 | 8.07E-49 | -1.69E-46 |
| MS.gene049850 | MS.gene39143 | 0.809185 | 2.14E-50 | -1.69E-46 |
| MS.gene049887 | MS.gene39143 | 0.807614 | 4.64E-50 | -1.69E-46 |
| MS.gene049983 | MS.gene39143 | 0.823692 | 1.21E-53 | -1.69E-46 |
| MS.gene050384 | MS.gene39143 | 0.830494 | 2.85E-55 | -1.69E-46 |
| MS.gene050386 | MS.gene39143 | 0.832498 | 9.14E-56 | -1.69E-46 |
| MS.gene050551 | MS.gene39143 | 0.82453 | 7.68E-54 | -1.69E-46 |
| MS.gene050646 | MS.gene39143 | 0.813808 | 2.12E-51 | -1.69E-46 |
| MS.gene050654 | MS.gene39143 | 0.843911 | 1.05E-58 | -1.69E-46 |
| MS.gene050689 | MS.gene39143 | 0.847464 | 1.14E-59 | -1.69E-46 |
| MS.gene050759 | MS.gene39143 | 0.801705 | 7.94E-49 | -1.69E-46 |
| MS.gene050838 | MS.gene39143 | 0.843106 | 1.72E-58 | -1.69E-46 |
| MS.gene050941 | MS.gene39143 | 0.841158 | 5.63E-58 | -1.69E-46 |
| MS.gene051003 | MS.gene39143 | 0.839795 | 1.28E-57 | -1.69E-46 |
| MS.gene051102 | MS.gene39143 | 0.8114 | 7.14E-51 | -1.69E-46 |
| MS.gene051233 | MS.gene39143 | 0.804071 | 2.58E-49 | -1.69E-46 |
| MS.gene051234 | MS.gene39143 | 0.834656 | 2.64E-56 | -1.69E-46 |
| MS.gene051328 | MS.gene39143 | 0.828453 | 8.91E-55 | -1.69E-46 |
| MS.gene051343 | MS.gene39143 | 0.804986 | 1.66E-49 | -1.69E-46 |
| MS.gene051381 | MS.gene39143 | 0.803254 | 3.81E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene39143 | 0.816053 | 6.74E-52 | -1.69E-46 |
| MS.gene051975 | MS.gene39143 | 0.817612 | 3.01E-52 | -1.69E-46 |
| MS.gene052307 | MS.gene39143 | 0.835152 | 1.98E-56 | -1.69E-46 |
| MS.gene052335 | MS.gene39143 | 0.844923 | 5.59E-59 | -1.69E-46 |
| MS.gene052342 | MS.gene39143 | 0.832801 | 7.68E-56 | -1.69E-46 |
| MS.gene052397 | MS.gene39143 | 0.800787 | 1.22E-48 | -1.69E-46 |
| MS.gene052434 | MS.gene39143 | 0.820792 | 5.69E-53 | -1.69E-46 |
| MS.gene052459 | MS.gene39143 | 0.824503 | 7.79E-54 | -1.69E-46 |
| MS.gene052463 | MS.gene39143 | 0.857576 | 1.49E-62 | -1.69E-46 |
| MS.gene052516 | MS.gene39143 | 0.865917 | 4.17E-65 | -1.69E-46 |
| MS.gene052609 | MS.gene39143 | 0.834197 | 3.45E-56 | -1.69E-46 |
| MS.gene052863 | MS.gene39143 | 0.82047 | 6.75E-53 | -1.69E-46 |
| MS.gene052896 | MS.gene39143 | 0.814114 | 1.82E-51 | -1.69E-46 |
| MS.gene053008 | MS.gene39143 | 0.802473 | 5.52E-49 | -1.69E-46 |
| MS.gene053058 | MS.gene39143 | 0.827608 | 1.42E-54 | -1.69E-46 |
| MS.gene053079 | MS.gene39143 | 0.819702 | 1.01E-52 | -1.69E-46 |
| MS.gene053143 | MS.gene39143 | 0.819487 | 1.13E-52 | -1.69E-46 |
| MS.gene053144 | MS.gene39143 | 0.814106 | 1.82E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene39143 | 0.80431 | 2.30E-49 | -1.69E-46 |
| MS.gene05350 | MS.gene39143 | 0.806067 | 9.85E-50 | -1.69E-46 |
| MS.gene053581 | MS.gene39143 | 0.831107 | 2.01E-55 | -1.69E-46 |
| MS.gene05423 | MS.gene39143 | 0.802416 | 5.67E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene39143 | 0.804889 | 1.74E-49 | -1.69E-46 |
| MS.gene05458 | MS.gene39143 | 0.828912 | 6.90E-55 | -1.69E-46 |
| MS.gene05462 | MS.gene39143 | 0.811969 | 5.37E-51 | -1.69E-46 |
| MS.gene054651 | MS.gene39143 | 0.802489 | 5.48E-49 | -1.69E-46 |
| MS.gene05517 | MS.gene39143 | 0.810222 | 1.28E-50 | -1.69E-46 |
| MS.gene055311 | MS.gene39143 | 0.848364 | 6.43E-60 | -1.69E-46 |
| MS.gene055313 | MS.gene39143 | 0.851548 | 8.26E-61 | -1.69E-46 |
| MS.gene055314 | MS.gene39143 | 0.812768 | 3.59E-51 | -1.69E-46 |
| MS.gene055465 | MS.gene39143 | 0.812295 | 4.56E-51 | -1.69E-46 |
| MS.gene055466 | MS.gene39143 | 0.811741 | 6.02E-51 | -1.69E-46 |
| MS.gene055468 | MS.gene39143 | 0.808666 | 2.77E-50 | -1.69E-46 |
| MS.gene055469 | MS.gene39143 | 0.824102 | 9.68E-54 | -1.69E-46 |
| MS.gene055513 | MS.gene39143 | 0.875397 | 3.18E-68 | -1.69E-46 |
| MS.gene055864 | MS.gene39143 | 0.83322 | 6.04E-56 | -1.69E-46 |
| MS.gene055926 | MS.gene39143 | 0.816568 | 5.17E-52 | -1.69E-46 |
| MS.gene055979 | MS.gene39143 | 0.836688 | 8.08E-57 | -1.69E-46 |
| MS.gene056045 | MS.gene39143 | 0.806495 | 8.00E-50 | -1.69E-46 |
| MS.gene056181 | MS.gene39143 | 0.84992 | 2.37E-60 | -1.69E-46 |
| MS.gene056308 | MS.gene39143 | 0.82679 | 2.24E-54 | -1.69E-46 |
| MS.gene056390 | MS.gene39143 | 0.834692 | 2.59E-56 | -1.69E-46 |
| MS.gene056507 | MS.gene39143 | 0.805806 | 1.12E-49 | -1.69E-46 |
| MS.gene056699 | MS.gene39143 | 0.834217 | 3.41E-56 | -1.69E-46 |
| MS.gene056831 | MS.gene39143 | 0.803633 | 3.18E-49 | -1.69E-46 |
| MS.gene057034 | MS.gene39143 | 0.825118 | 5.58E-54 | -1.69E-46 |
| MS.gene057102 | MS.gene39143 | 0.804756 | 1.85E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene39143 | 0.850331 | 1.82E-60 | -1.69E-46 |
| MS.gene058010 | MS.gene39143 | 0.810362 | 1.20E-50 | -1.69E-46 |
| MS.gene058339 | MS.gene39143 | 0.805397 | 1.36E-49 | -1.69E-46 |
| MS.gene058758 | MS.gene39143 | 0.820125 | 8.09E-53 | -1.69E-46 |
| MS.gene059146 | MS.gene39143 | 0.817187 | 3.76E-52 | -1.69E-46 |
| MS.gene059170 | MS.gene39143 | 0.856475 | 3.14E-62 | -1.69E-46 |
| MS.gene059283 | MS.gene39143 | 0.827134 | 1.85E-54 | -1.69E-46 |
| MS.gene059290 | MS.gene39143 | 0.80914 | 2.19E-50 | -1.69E-46 |
| MS.gene059725 | MS.gene39143 | 0.814257 | 1.69E-51 | -1.69E-46 |
| MS.gene059842 | MS.gene39143 | 0.812014 | 5.25E-51 | -1.69E-46 |
| MS.gene059965 | MS.gene39143 | 0.813252 | 2.81E-51 | -1.69E-46 |
| MS.gene060259 | MS.gene39143 | 0.809994 | 1.44E-50 | -1.69E-46 |
| MS.gene060803 | MS.gene39143 | 0.822134 | 2.79E-53 | -1.69E-46 |
| MS.gene060932 | MS.gene39143 | 0.847477 | 1.13E-59 | -1.69E-46 |
| MS.gene061006 | MS.gene39143 | 0.831883 | 1.30E-55 | -1.69E-46 |
| MS.gene061100 | MS.gene39143 | 0.848914 | 4.52E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39143.t1 | MTR_0136s0060 | 97.384 | 344 | 9 | 0 | 1 | 344 | 1 | 344 | 0.0 | 677 |
| MS.gene39143.t1 | MTR_7g093500 | 69.859 | 355 | 95 | 3 | 1 | 344 | 1 | 354 | 5.85e-177 | 494 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39143.t1 | AT3G12050 | 67.867 | 361 | 98 | 3 | 1 | 344 | 1 | 360 | 8.92e-176 | 492 |
| MS.gene39143.t1 | AT3G12050 | 60.942 | 361 | 84 | 4 | 1 | 344 | 1 | 321 | 1.06e-148 | 422 |
Find 94 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGATGAAGATCCTGAAATT+AGG | 0.214851 | 1.2:-41563536 | MS.gene39143:CDS |
| ATTCGATCTGTGTTTGGTTT+TGG | 0.228632 | 1.2:-41561503 | MS.gene39143:CDS |
| GAAAGGGAAAGGGTTGATTT+TGG | 0.239317 | 1.2:-41563457 | MS.gene39143:CDS |
| TTTGGAGAAGGTTAGGATTT+GGG | 0.256205 | 1.2:-41563439 | MS.gene39143:CDS |
| GTCTGTTACAGGGACGAATT+TGG | 0.286496 | 1.2:-41563130 | MS.gene39143:CDS |
| TTAACACTAACCCTAATTTC+AGG | 0.309839 | 1.2:+41563525 | None:intergenic |
| CCCAATTTCATGGCGAAATA+CGG | 0.334838 | 1.2:-41563906 | None:intergenic |
| CAGAGGATTCGATCTGTGTT+TGG | 0.353659 | 1.2:-41561509 | MS.gene39143:CDS |
| CTCTCAAGATCATCCTTAAC+AGG | 0.365405 | 1.2:+41563393 | None:intergenic |
| ATTGTTCAGAGATGGAGATT+TGG | 0.368974 | 1.2:-41563087 | MS.gene39143:CDS |
| TTCCCTTTCTCCTTCGCAAT+CGG | 0.370102 | 1.2:+41563309 | None:intergenic |
| TTGTGGACGTTTGTTCCGTC+TGG | 0.386272 | 1.2:+41563849 | None:intergenic |
| TTTAGACCATTCTAAACAAT+TGG | 0.390977 | 1.2:+41563809 | None:intergenic |
| GTGTTTGAGGAGCCTGAATC+TGG | 0.392808 | 1.2:-41561720 | MS.gene39143:CDS |
| TGAATGAAAAGTTTAATTGT+AGG | 0.394528 | 1.2:-41563263 | MS.gene39143:CDS |
| CCATTCTAAACAATTGGTTT+CGG | 0.396900 | 1.2:+41563815 | None:intergenic |
| ACGAATTTGGAGTTGGAAGA+AGG | 0.406217 | 1.2:-41563117 | MS.gene39143:CDS |
| TAATGATGGATGAGAATAGA+TGG | 0.417162 | 1.2:-41563221 | MS.gene39143:CDS |
| GCATTCTCATCAGAGATATA+CGG | 0.417274 | 1.2:+41563558 | None:intergenic |
| AGGGTTAGTGTTAAAGAAGA+AGG | 0.422944 | 1.2:-41563516 | MS.gene39143:CDS |
| GGAAGTTGATTGTTCAGAGA+TGG | 0.424875 | 1.2:-41563095 | MS.gene39143:CDS |
| CTAGGATTAGTAAAGAGGTT+GGG | 0.438628 | 1.2:-41563176 | MS.gene39143:CDS |
| AGAGATGGAGATTTGGAAGT+TGG | 0.439510 | 1.2:-41563080 | MS.gene39143:CDS |
| TGATGAAGATCCTGAAATTA+GGG | 0.441615 | 1.2:-41563535 | MS.gene39143:CDS |
| GTTCCGATTGCGAAGGAGAA+AGG | 0.444491 | 1.2:-41563312 | MS.gene39143:CDS |
| ACGGAACAAACGTCCACAAC+TGG | 0.451199 | 1.2:-41563845 | MS.gene39143:CDS |
| CCGAAACCAATTGTTTAGAA+TGG | 0.453161 | 1.2:-41563815 | MS.gene39143:CDS |
| GGTTGCGGTGGAGAAGAAAA+AGG | 0.455227 | 1.2:-41563346 | MS.gene39143:CDS |
| GCGAAGGAGAAAGGGAAGAA+GGG | 0.462652 | 1.2:-41563303 | MS.gene39143:CDS |
| GCTAGGATTAGTAAAGAGGT+TGG | 0.463455 | 1.2:-41563177 | MS.gene39143:CDS |
| ACCATTGATTGCATTCCATC+AGG | 0.464756 | 1.2:+41563057 | None:intergenic |
| AAATCAGCGTTAATCTTACC+TGG | 0.478445 | 1.2:-41563644 | MS.gene39143:CDS |
| GGTGAAGAGATTGTTGAAGA+AGG | 0.479610 | 1.2:+41563785 | None:intergenic |
| GGGTTGAGAGTATGTCGAAA+GGG | 0.482056 | 1.2:-41563419 | MS.gene39143:CDS |
| TAATGCTAGGATTAGTAAAG+AGG | 0.482426 | 1.2:-41563181 | MS.gene39143:CDS |
| GGATGATCTTGAGAGTAAGA+AGG | 0.484093 | 1.2:-41563385 | MS.gene39143:CDS |
| CGAATTTGGAGTTGGAAGAA+GGG | 0.486824 | 1.2:-41563116 | MS.gene39143:CDS |
| GTGATGAATTTGAAAGGGAA+AGG | 0.487842 | 1.2:-41563468 | MS.gene39143:CDS |
| GACATTAACGTAGGCTTCGC+CGG | 0.490050 | 1.2:+41563695 | None:intergenic |
| GAATGAAAAGTTTAATTGTA+GGG | 0.492311 | 1.2:-41563262 | MS.gene39143:CDS |
| AACACTTACCTGTCTTCCTC+AGG | 0.492323 | 1.2:+41561663 | None:intergenic |
| CTGATGTGCCTGAGGAAGAC+AGG | 0.498106 | 1.2:-41561671 | MS.gene39143:intron |
| GGATTTGTTTGAGATAATGA+TGG | 0.499387 | 1.2:-41563235 | MS.gene39143:CDS |
| TGCGAAGGAGAAAGGGAAGA+AGG | 0.505112 | 1.2:-41563304 | MS.gene39143:CDS |
| TTCCGATTGCGAAGGAGAAA+GGG | 0.512442 | 1.2:-41563311 | MS.gene39143:CDS |
| TAGGATTAGTAAAGAGGTTG+GGG | 0.512998 | 1.2:-41563175 | MS.gene39143:CDS |
| GTAGGTGAGAATTGTGTTTG+AGG | 0.517328 | 1.2:-41561733 | MS.gene39143:intron |
| TCCACCGCAACCGAATTCTT+CGG | 0.534007 | 1.2:+41563357 | None:intergenic |
| CAAACGTCCACAACTGGCAC+TGG | 0.540509 | 1.2:-41563839 | MS.gene39143:CDS |
| ACAACCGTAACTCCAGATTC+AGG | 0.541200 | 1.2:+41561708 | None:intergenic |
| GTCACGCGATTCACCTTCCC+AGG | 0.543146 | 1.2:+41563626 | None:intergenic |
| TACAGGGACGAATTTGGAGT+TGG | 0.543461 | 1.2:-41563124 | MS.gene39143:CDS |
| AGGGATGTGATGAATTTGAA+AGG | 0.544348 | 1.2:-41563474 | MS.gene39143:CDS |
| AAAGTTTAATTGTAGGGCGA+AGG | 0.545260 | 1.2:-41563256 | MS.gene39143:CDS |
| TTTGCCGAAGAATTCGGTTG+CGG | 0.548653 | 1.2:-41563361 | MS.gene39143:CDS |
| CGAAGGAGAAAGGGAAGAAG+GGG | 0.550986 | 1.2:-41563302 | MS.gene39143:CDS |
| CAAACACAGATCGAATCCTC+TGG | 0.557147 | 1.2:+41561510 | None:intergenic |
| TTTCGGACCAGTGCCAGTTG+TGG | 0.558239 | 1.2:+41563832 | None:intergenic |
| GCGAAGCCTACGTTAATGTC+CGG | 0.558433 | 1.2:-41563692 | MS.gene39143:CDS |
| CGGAAGGGTAAAATCATCCC+TGG | 0.564473 | 1.2:-41563672 | MS.gene39143:CDS |
| GGAGCCTGAATCTGGAGTTA+CGG | 0.567314 | 1.2:-41561712 | MS.gene39143:CDS |
| AGCGTTAATCTTACCTGGGA+AGG | 0.567591 | 1.2:-41563639 | MS.gene39143:CDS |
| GGTGAATCGCGTGACTCTGA+AGG | 0.573999 | 1.2:-41563618 | MS.gene39143:CDS |
| TGATGAATTTGAAAGGGAAA+GGG | 0.578004 | 1.2:-41563467 | MS.gene39143:CDS |
| ATGGATGAGAATAGATGGAA+GGG | 0.581087 | 1.2:-41563216 | MS.gene39143:CDS |
| GCCGAAGAATTCGGTTGCGG+TGG | 0.581339 | 1.2:-41563358 | MS.gene39143:CDS |
| GGTTGAGAGTATGTCGAAAG+GGG | 0.585528 | 1.2:-41563418 | MS.gene39143:CDS |
| GATGGATGAGAATAGATGGA+AGG | 0.585625 | 1.2:-41563217 | MS.gene39143:CDS |
| TGGGTTGAGAGTATGTCGAA+AGG | 0.592875 | 1.2:-41563420 | MS.gene39143:CDS |
| AGATTTGGAAGTTGGCCTGA+TGG | 0.599447 | 1.2:-41563072 | MS.gene39143:CDS |
| GGGATGTGATGAATTTGAAA+GGG | 0.599850 | 1.2:-41563473 | MS.gene39143:CDS |
| TTAACGCTGATTTCGTAACC+AGG | 0.601353 | 1.2:+41563654 | None:intergenic |
| ATCGCGTGACTCTGAAGGAA+AGG | 0.603713 | 1.2:-41563613 | MS.gene39143:CDS |
| GCCTGATGGAATGCAATCAA+TGG | 0.604990 | 1.2:-41563058 | MS.gene39143:intron |
| ATTCGGGAATGCGACTGTGG+TGG | 0.607444 | 1.2:-41561567 | MS.gene39143:CDS |
| AGCCTACGTTAATGTCCGGA+AGG | 0.620834 | 1.2:-41563688 | MS.gene39143:CDS |
| GGAAGTTGTTCCGATTGCGA+AGG | 0.626149 | 1.2:-41563319 | MS.gene39143:CDS |
| TTCATGGCGAAATACGGCGA+AGG | 0.644564 | 1.2:-41563900 | MS.gene39143:CDS |
| GCCTACGTTAATGTCCGGAA+GGG | 0.648817 | 1.2:-41563687 | MS.gene39143:CDS |
| AACACACACTGATGTGCCTG+AGG | 0.650288 | 1.2:-41561679 | MS.gene39143:CDS |
| ATCGTAGAAGACAGACCAGA+CGG | 0.651665 | 1.2:-41563864 | MS.gene39143:CDS |
| TTGAGAGTATGTCGAAAGGG+GGG | 0.658641 | 1.2:-41563416 | MS.gene39143:CDS |
| TGTGGTGGAGAATACAGAGA+GGG | 0.658921 | 1.2:-41561552 | MS.gene39143:CDS |
| TAACGCTGATTTCGTAACCA+GGG | 0.666634 | 1.2:+41563655 | None:intergenic |
| CAGATTCGGGAATGCGACTG+TGG | 0.673043 | 1.2:-41561570 | MS.gene39143:CDS |
| AATCAGCGTTAATCTTACCT+GGG | 0.675444 | 1.2:-41563643 | MS.gene39143:CDS |
| GGAGGGATCTCATATTCCAG+AGG | 0.690910 | 1.2:-41561526 | MS.gene39143:CDS |
| ACGGCGAAGGAGACAAACGT+TGG | 0.691467 | 1.2:-41563887 | MS.gene39143:CDS |
| ACCCTTCCGGACATTAACGT+AGG | 0.692824 | 1.2:+41563686 | None:intergenic |
| GTTGAGAGTATGTCGAAAGG+GGG | 0.694915 | 1.2:-41563417 | MS.gene39143:CDS |
| TGGTGGAGAATACAGAGAGG+GGG | 0.719678 | 1.2:-41561550 | MS.gene39143:CDS |
| CTGTGGTGGAGAATACAGAG+AGG | 0.727134 | 1.2:-41561553 | MS.gene39143:CDS |
| GTGGTGGAGAATACAGAGAG+GGG | 0.732260 | 1.2:-41561551 | MS.gene39143:CDS |
| AGGATTAGTAAAGAGGTTGG+GGG | 0.750169 | 1.2:-41563174 | MS.gene39143:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAACTGTTAAATTTTAAAAT+AGG | - | chr1.2:41563227-41563246 | MS.gene39143:CDS | 10.0% |
| !!! | AACTGTTAAATTTTAAAATA+GGG | - | chr1.2:41563228-41563247 | MS.gene39143:CDS | 10.0% |
| !!! | AACTTTTAGATTTTAAAATA+CGG | + | chr1.2:41562754-41562773 | None:intergenic | 10.0% |
| !!! | ATATAATTTTTACAATAGTT+TGG | - | chr1.2:41563310-41563329 | MS.gene39143:CDS | 10.0% |
| !!! | ATTGTTAAATTTTAAAATAG+AGG | - | chr1.2:41563200-41563219 | MS.gene39143:CDS | 10.0% |
| !!! | ATTTTAAAATCTAAAAGTTT+TGG | - | chr1.2:41562755-41562774 | MS.gene39143:intron | 10.0% |
| !!! | TCTATTTTAAAATTTAACAA+TGG | + | chr1.2:41563201-41563220 | None:intergenic | 10.0% |
| !! | AATGTAAAATTGTTCTATTT+AGG | + | chr1.2:41563069-41563088 | None:intergenic | 15.0% |
| !! | ATAGCTTATCAAAATAATTT+AGG | - | chr1.2:41562676-41562695 | MS.gene39143:intron | 15.0% |
| !! | TTTGTTTATGTTTGAATTAA+GGG | - | chr1.2:41562374-41562393 | MS.gene39143:intron | 15.0% |
| !!! | AAACTGTCAAATTTTAAAAT+TGG | - | chr1.2:41562943-41562962 | MS.gene39143:intron | 15.0% |
| !!! | AACTGTCAAATTTTAAAATT+GGG | - | chr1.2:41562944-41562963 | MS.gene39143:intron | 15.0% |
| !!! | AATTTTAAAATTTGACAGTT+TGG | + | chr1.2:41562944-41562963 | None:intergenic | 15.0% |
| !!! | ACTGTTAAATTTTAAAATAG+GGG | - | chr1.2:41563229-41563248 | MS.gene39143:CDS | 15.0% |
| !!! | ACTTATTTCTATAAACTTTT+AGG | - | chr1.2:41562649-41562668 | MS.gene39143:intron | 15.0% |
| !!! | ATTTTAAAATTTGACAGTTT+GGG | + | chr1.2:41562943-41562962 | None:intergenic | 15.0% |
| !!! | TAAATAGAACAATTTTACAT+TGG | - | chr1.2:41563068-41563087 | MS.gene39143:CDS | 15.0% |
| !!! | TTTAATTATTTTGGTTTTGA+TGG | - | chr1.2:41563751-41563770 | MS.gene39143:CDS | 15.0% |
| !!! | TTTTGTTTATGTTTGAATTA+AGG | - | chr1.2:41562373-41562392 | MS.gene39143:intron | 15.0% |
| !! | AATGATATAAGCTCTTAATT+AGG | - | chr1.2:41563350-41563369 | MS.gene39143:CDS | 20.0% |
| !! | ATAGAAATACACATATCAAA+AGG | + | chr1.2:41563133-41563152 | None:intergenic | 20.0% |
| !! | ATCTGCAAAATAATGAAAAT+AGG | + | chr1.2:41562724-41562743 | None:intergenic | 20.0% |
| !! | GAATGAAAAGTTTAATTGTA+GGG | - | chr1.2:41562131-41562150 | MS.gene39143:intron | 20.0% |
| !! | TAATTAAGAGCTTATATCAT+TGG | + | chr1.2:41563351-41563370 | None:intergenic | 20.0% |
| !! | TATGCAAAATGATGAAAATA+GGG | - | chr1.2:41563259-41563278 | MS.gene39143:CDS | 20.0% |
| !! | TCTGCAAAATAATGAAAATA+GGG | + | chr1.2:41562723-41562742 | None:intergenic | 20.0% |
| !! | TGAATGAAAAGTTTAATTGT+AGG | - | chr1.2:41562130-41562149 | MS.gene39143:intron | 20.0% |
| !! | TTAGATCAAATATTTGATAG+AGG | - | chr1.2:41562983-41563002 | MS.gene39143:intron | 20.0% |
| !! | TTATGCAAAATGATGAAAAT+AGG | - | chr1.2:41563258-41563277 | MS.gene39143:CDS | 20.0% |
| !!! | AAATCAGTGTTTAACTTTTT+CGG | - | chr1.2:41563435-41563454 | MS.gene39143:CDS | 20.0% |
| !!! | ACTGTCAAATTTTAAAATTG+GGG | - | chr1.2:41562945-41562964 | MS.gene39143:intron | 20.0% |
| !!! | AGGTAAGTGTTTAATTATTT+TGG | - | chr1.2:41563742-41563761 | MS.gene39143:CDS | 20.0% |
| !!! | ATTTCTATAAACTTTTAGGA+TGG | - | chr1.2:41562653-41562672 | MS.gene39143:intron | 20.0% |
| !!! | CCAATTTTTAGTTCAAAAAT+AGG | + | chr1.2:41562789-41562808 | None:intergenic | 20.0% |
| !!! | CCTATTTTTGAACTAAAAAT+TGG | - | chr1.2:41562786-41562805 | MS.gene39143:intron | 20.0% |
| !!! | CTGTTAAATTTTAAAATAGG+GGG | - | chr1.2:41563230-41563249 | MS.gene39143:CDS | 20.0% |
| !!! | GTTTTAAACGATGTTTTTAA+GGG | + | chr1.2:41562892-41562911 | None:intergenic | 20.0% |
| !!! | TGTTTTAAACGATGTTTTTA+AGG | + | chr1.2:41562893-41562912 | None:intergenic | 20.0% |
| !!! | TTTGAATATTTGTTTCTGAA+TGG | - | chr1.2:41563626-41563645 | MS.gene39143:CDS | 20.0% |
| !!! | TTTGATCTAAAATGCATAAT+TGG | + | chr1.2:41562973-41562992 | None:intergenic | 20.0% |
| !!! | TTTTCATCATTTTGCATAAT+TGG | + | chr1.2:41563257-41563276 | None:intergenic | 20.0% |
| !!! | TTTTCATTATTTTGCAGATT+TGG | - | chr1.2:41562725-41562744 | MS.gene39143:intron | 20.0% |
| ! | AAAAATTGCGAATAGTTTGA+GGG | - | chr1.2:41561900-41561919 | MS.gene39143:intron | 25.0% |
| ! | AGCTTCAATTGCAATTATAT+TGG | + | chr1.2:41563466-41563485 | None:intergenic | 25.0% |
| ! | ATCAAATATTTGATAGAGGA+GGG | - | chr1.2:41562987-41563006 | MS.gene39143:intron | 25.0% |
| ! | ATGCAAAATGATGAAAATAG+GGG | - | chr1.2:41563260-41563279 | MS.gene39143:CDS | 25.0% |
| ! | CTGCAAAATAATGAAAATAG+GGG | + | chr1.2:41562722-41562741 | None:intergenic | 25.0% |
| ! | TGCAAAATAATGAAAATAGG+GGG | + | chr1.2:41562721-41562740 | None:intergenic | 25.0% |
| ! | TTTAGACCATTCTAAACAAT+TGG | + | chr1.2:41561587-41561606 | None:intergenic | 25.0% |
| !! | AACTATTTTACTAGTTCACT+CGG | + | chr1.2:41562603-41562622 | None:intergenic | 25.0% |
| !! | AATTGACTTATTCGAGTATA+TGG | - | chr1.2:41562518-41562537 | MS.gene39143:intron | 25.0% |
| !! | CATTAGGTAATTTAGAATTC+TGG | - | chr1.2:41563510-41563529 | MS.gene39143:CDS | 25.0% |
| !! | CTTTTGTTCAAAACCTTTTT+CGG | - | chr1.2:41563596-41563615 | MS.gene39143:CDS | 25.0% |
| !! | TTAATTAGGTTGTATCCAAA+CGG | - | chr1.2:41563364-41563383 | MS.gene39143:CDS | 25.0% |
| !! | TTTGGGTTTGATCTAAAATA+TGG | + | chr1.2:41562926-41562945 | None:intergenic | 25.0% |
| !!! | GTGAGTTTAGTATTTTTGAT+GGG | - | chr1.2:41562241-41562260 | MS.gene39143:intron | 25.0% |
| !!! | GTTGATGACATGTTAATAAT+TGG | - | chr1.2:41562620-41562639 | MS.gene39143:intron | 25.0% |
| !!! | TATTGGCTTAATTGCAATTT+TGG | + | chr1.2:41563288-41563307 | None:intergenic | 25.0% |
| !!! | TTTGATGGATAATTTTGTGT+CGG | - | chr1.2:41563766-41563785 | MS.gene39143:CDS | 25.0% |
| !!! | TTTTGCAAGGTTTTAGATTA+CGG | - | chr1.2:41562405-41562424 | MS.gene39143:intron | 25.0% |
| AAAAAAGTCGAAAAGCTTTC+CGG | - | chr1.2:41561679-41561698 | MS.gene39143:CDS | 30.0% | |
| AACAAGACCCTTTAACAATT+TGG | + | chr1.2:41563015-41563034 | None:intergenic | 30.0% | |
| CGGATATTTGTGGTTAAATA+CGG | - | chr1.2:41563400-41563419 | MS.gene39143:CDS | 30.0% | |
| GAAAAATTGCGAATAGTTTG+AGG | - | chr1.2:41561899-41561918 | MS.gene39143:intron | 30.0% | |
| GATCAAATATTTGATAGAGG+AGG | - | chr1.2:41562986-41563005 | MS.gene39143:intron | 30.0% | |
| TGATGAAGATCCTGAAATTA+GGG | - | chr1.2:41561858-41561877 | MS.gene39143:intron | 30.0% | |
| TGATGAATTTGAAAGGGAAA+GGG | - | chr1.2:41561926-41561945 | MS.gene39143:intron | 30.0% | |
| TGCATTTGATTGTAAGCATT+AGG | - | chr1.2:41563494-41563513 | MS.gene39143:CDS | 30.0% | |
| TGTAATATTGCGGATATTTG+TGG | - | chr1.2:41563390-41563409 | MS.gene39143:CDS | 30.0% | |
| TGTGATTTATGATATGACGA+TGG | - | chr1.2:41562831-41562850 | MS.gene39143:intron | 30.0% | |
| TTAACACTAACCCTAATTTC+AGG | + | chr1.2:41561871-41561890 | None:intergenic | 30.0% | |
| TTGTGTGACACTTGTATATT+AGG | - | chr1.2:41562556-41562575 | MS.gene39143:intron | 30.0% | |
| ! | AAGGGTTTTTCTATTTTGCA+AGG | - | chr1.2:41562392-41562411 | MS.gene39143:intron | 30.0% |
| ! | CCATTCTAAACAATTGGTTT+CGG | + | chr1.2:41561581-41561600 | None:intergenic | 30.0% |
| ! | GATTGACTTATTCGAGTTTA+TGG | - | chr1.2:41562456-41562475 | MS.gene39143:intron | 30.0% |
| ! | GGATTTGTTTGAGATAATGA+TGG | - | chr1.2:41562158-41562177 | MS.gene39143:intron | 30.0% |
| ! | TAATGCTAGGATTAGTAAAG+AGG | - | chr1.2:41562212-41562231 | MS.gene39143:intron | 30.0% |
| !! | GGTGAGTTTAGTATTTTTGA+TGG | - | chr1.2:41562240-41562259 | MS.gene39143:intron | 30.0% |
| !! | TAATGATGGATGAGAATAGA+TGG | - | chr1.2:41562172-41562191 | MS.gene39143:intron | 30.0% |
| AAAGTTTAATTGTAGGGCGA+AGG | - | chr1.2:41562137-41562156 | MS.gene39143:intron | 35.0% | |
| AAATCAGCGTTAATCTTACC+TGG | - | chr1.2:41561749-41561768 | MS.gene39143:intron | 35.0% | |
| AATCAGCGTTAATCTTACCT+GGG | - | chr1.2:41561750-41561769 | MS.gene39143:intron | 35.0% | |
| AGGGATGTGATGAATTTGAA+AGG | - | chr1.2:41561919-41561938 | MS.gene39143:intron | 35.0% | |
| ATGGATGAGAATAGATGGAA+GGG | - | chr1.2:41562177-41562196 | MS.gene39143:intron | 35.0% | |
| ATTGTTCAGAGATGGAGATT+TGG | - | chr1.2:41562306-41562325 | MS.gene39143:intron | 35.0% | |
| CCGAAACCAATTGTTTAGAA+TGG | - | chr1.2:41561578-41561597 | MS.gene39143:intron | 35.0% | |
| CTGATGAAGATCCTGAAATT+AGG | - | chr1.2:41561857-41561876 | MS.gene39143:intron | 35.0% | |
| CTTATTCGAGTATATGGACT+AGG | - | chr1.2:41562524-41562543 | MS.gene39143:intron | 35.0% | |
| GAGGGATCCAAATTGTTAAA+GGG | - | chr1.2:41563005-41563024 | MS.gene39143:intron | 35.0% | |
| GCATTCTCATCAGAGATATA+CGG | + | chr1.2:41561838-41561857 | None:intergenic | 35.0% | |
| GGGATGTGATGAATTTGAAA+GGG | - | chr1.2:41561920-41561939 | MS.gene39143:intron | 35.0% | |
| GTGATGAATTTGAAAGGGAA+AGG | - | chr1.2:41561925-41561944 | MS.gene39143:intron | 35.0% | |
| GTTGTGTTCAAATGCAGATT+CGG | - | chr1.2:41563809-41563828 | MS.gene39143:CDS | 35.0% | |
| TATCTTAACATGTGCCTTGA+GGG | - | chr1.2:41563159-41563178 | MS.gene39143:CDS | 35.0% | |
| TCGAATAAGTCAATCCAAAC+AGG | + | chr1.2:41562451-41562470 | None:intergenic | 35.0% | |
| TTCAAATCACGTTCCGAAAA+AGG | + | chr1.2:41563612-41563631 | None:intergenic | 35.0% | |
| TTGTGTTCAAATGCAGATTC+GGG | - | chr1.2:41563810-41563829 | MS.gene39143:CDS | 35.0% | |
| TTTAGATTACGGTTGTGTTG+CGG | - | chr1.2:41562416-41562435 | MS.gene39143:intron | 35.0% | |
| TTTGGAGAAGGTTAGGATTT+GGG | - | chr1.2:41561954-41561973 | MS.gene39143:intron | 35.0% | |
| ! | AAAGGTTTTGCAGAAGGTTA+AGG | - | chr1.2:41561798-41561817 | MS.gene39143:intron | 35.0% |
| ! | AAGGTTTTGCAGAAGGTTAA+GGG | - | chr1.2:41561799-41561818 | MS.gene39143:intron | 35.0% |
| ! | AGGGTTAGTGTTAAAGAAGA+AGG | - | chr1.2:41561877-41561896 | MS.gene39143:intron | 35.0% |
| ! | CTAGGATTAGTAAAGAGGTT+GGG | - | chr1.2:41562217-41562236 | MS.gene39143:intron | 35.0% |
| ! | CTTATTCGAGTTTATGGACT+AGG | - | chr1.2:41562462-41562481 | MS.gene39143:intron | 35.0% |
| ! | TAGGATTAGTAAAGAGGTTG+GGG | - | chr1.2:41562218-41562237 | MS.gene39143:intron | 35.0% |
| ! | TGAATGGCTGTGAATTTTGT+AGG | - | chr1.2:41563642-41563661 | MS.gene39143:CDS | 35.0% |
| !! | ATTCGATCTGTGTTTGGTTT+TGG | - | chr1.2:41563890-41563909 | MS.gene39143:CDS | 35.0% |
| !! | ATTTTTGATGGGTCTGTTAC+AGG | - | chr1.2:41562252-41562271 | MS.gene39143:intron | 35.0% |
| !! | TGATTTGGAGGTTATTTTCG+TGG | + | chr1.2:41561654-41561673 | None:intergenic | 35.0% |
| !! | TTTTGGAGAAGGTTAGGATT+TGG | - | chr1.2:41561953-41561972 | MS.gene39143:intron | 35.0% |
| !! | TTTTTGATGGGTCTGTTACA+GGG | - | chr1.2:41562253-41562272 | MS.gene39143:intron | 35.0% |
| !!! | CGACTTTTTTGACAGTGATT+TGG | + | chr1.2:41561669-41561688 | None:intergenic | 35.0% |
| !!! | CTTTTTTGACAGTGATTTGG+AGG | + | chr1.2:41561666-41561685 | None:intergenic | 35.0% |
| !!! | GTCATCGATGATTTTGAGAT+TGG | + | chr1.2:41561632-41561651 | None:intergenic | 35.0% |
| AGAGATGGAGATTTGGAAGT+TGG | - | chr1.2:41562313-41562332 | MS.gene39143:intron | 40.0% | |
| CAAACGGCGTTGTAATATTG+CGG | - | chr1.2:41563380-41563399 | MS.gene39143:CDS | 40.0% | |
| CTCTCAAGATCATCCTTAAC+AGG | + | chr1.2:41562003-41562022 | None:intergenic | 40.0% | |
| GATGGATGAGAATAGATGGA+AGG | - | chr1.2:41562176-41562195 | MS.gene39143:intron | 40.0% | |
| GGAGGGATCCAAATTGTTAA+AGG | - | chr1.2:41563004-41563023 | MS.gene39143:intron | 40.0% | |
| GGATGATCTTGAGAGTAAGA+AGG | - | chr1.2:41562008-41562027 | MS.gene39143:intron | 40.0% | |
| GGTGAAGAGATTGTTGAAGA+AGG | + | chr1.2:41561611-41561630 | None:intergenic | 40.0% | |
| GTAGGTGAGAATTGTGTTTG+AGG | - | chr1.2:41563660-41563679 | MS.gene39143:CDS | 40.0% | |
| GTATCTTAACATGTGCCTTG+AGG | - | chr1.2:41563158-41563177 | MS.gene39143:CDS | 40.0% | |
| TTGCTTAACATGTGCCCTAA+GGG | + | chr1.2:41563046-41563065 | None:intergenic | 40.0% | |
| ! | ACCATTGATTGCATTCCATC+AGG | + | chr1.2:41562339-41562358 | None:intergenic | 40.0% |
| ! | ACGAATTTGGAGTTGGAAGA+AGG | - | chr1.2:41562276-41562295 | MS.gene39143:intron | 40.0% |
| ! | AGGATTAGTAAAGAGGTTGG+GGG | - | chr1.2:41562219-41562238 | MS.gene39143:intron | 40.0% |
| ! | CGAATTTGGAGTTGGAAGAA+GGG | - | chr1.2:41562277-41562296 | MS.gene39143:intron | 40.0% |
| ! | GAAGGTTTTGCCGAAGAATT+CGG | - | chr1.2:41562026-41562045 | MS.gene39143:intron | 40.0% |
| ! | GCTAGGATTAGTAAAGAGGT+TGG | - | chr1.2:41562216-41562235 | MS.gene39143:intron | 40.0% |
| ! | GGAAGTTGATTGTTCAGAGA+TGG | - | chr1.2:41562298-41562317 | MS.gene39143:intron | 40.0% |
| ! | GTTTTACGCAGAGTAATGCT+AGG | - | chr1.2:41562199-41562218 | MS.gene39143:intron | 40.0% |
| ! | TGAAGGAAAGGTTTTGCAGA+AGG | - | chr1.2:41561792-41561811 | MS.gene39143:intron | 40.0% |
| !! | AATGTTAACTTGTGCCCTCA+AGG | + | chr1.2:41563176-41563195 | None:intergenic | 40.0% |
| !! | CTTGTTAACTTGTGCCCTTA+GGG | - | chr1.2:41563029-41563048 | MS.gene39143:intron | 40.0% |
| !! | GAAAGGGAAAGGGTTGATTT+TGG | - | chr1.2:41561936-41561955 | MS.gene39143:intron | 40.0% |
| !! | GAAAGGGTTGATTTTGGAGA+AGG | - | chr1.2:41561942-41561961 | MS.gene39143:intron | 40.0% |
| !! | GGTTGATTTTGGAGAAGGTT+AGG | - | chr1.2:41561947-41561966 | MS.gene39143:intron | 40.0% |
| !! | TAACGCTGATTTCGTAACCA+GGG | + | chr1.2:41561741-41561760 | None:intergenic | 40.0% |
| !! | TCTTGTTAACTTGTGCCCTT+AGG | - | chr1.2:41563028-41563047 | MS.gene39143:intron | 40.0% |
| !! | TTAACGCTGATTTCGTAACC+AGG | + | chr1.2:41561742-41561761 | None:intergenic | 40.0% |
| AACACTTACCTGTCTTCCTC+AGG | + | chr1.2:41563733-41563752 | None:intergenic | 45.0% | |
| ACAACCGTAACTCCAGATTC+AGG | + | chr1.2:41563688-41563707 | None:intergenic | 45.0% | |
| ACGGTTGTGTTGCGGTATAT+AGG | - | chr1.2:41562424-41562443 | MS.gene39143:intron | 45.0% | |
| AGCGTTAATCTTACCTGGGA+AGG | - | chr1.2:41561754-41561773 | MS.gene39143:intron | 45.0% | |
| ATCGTAGAAGACAGACCAGA+CGG | - | chr1.2:41561529-41561548 | MS.gene39143:CDS | 45.0% | |
| CAAACACAGATCGAATCCTC+TGG | + | chr1.2:41563886-41563905 | None:intergenic | 45.0% | |
| CAGAGGATTCGATCTGTGTT+TGG | - | chr1.2:41563884-41563903 | MS.gene39143:CDS | 45.0% | |
| CGCAATATTACAACGCCGTT+TGG | + | chr1.2:41563382-41563401 | None:intergenic | 45.0% | |
| CGGTTGTGTTGCGGTATATA+GGG | - | chr1.2:41562425-41562444 | MS.gene39143:intron | 45.0% | |
| GCCTGATGGAATGCAATCAA+TGG | - | chr1.2:41562335-41562354 | MS.gene39143:intron | 45.0% | |
| GTCTGTTACAGGGACGAATT+TGG | - | chr1.2:41562263-41562282 | MS.gene39143:intron | 45.0% | |
| GTTGCTTAACATGTGCCCTA+AGG | + | chr1.2:41563047-41563066 | None:intergenic | 45.0% | |
| TTCCCTTTCTCCTTCGCAAT+CGG | + | chr1.2:41562087-41562106 | None:intergenic | 45.0% | |
| TTCCGATTGCGAAGGAGAAA+GGG | - | chr1.2:41562082-41562101 | MS.gene39143:intron | 45.0% | |
| TTTGCCGAAGAATTCGGTTG+CGG | - | chr1.2:41562032-41562051 | MS.gene39143:intron | 45.0% | |
| ! | AGATTTGGAAGTTGGCCTGA+TGG | - | chr1.2:41562321-41562340 | MS.gene39143:intron | 45.0% |
| ! | CAGGGATGATTTTACCCTTC+CGG | + | chr1.2:41561723-41561742 | None:intergenic | 45.0% |
| ! | GGGTTGAGAGTATGTCGAAA+GGG | - | chr1.2:41561974-41561993 | MS.gene39143:intron | 45.0% |
| ! | GGTTGAGAGTATGTCGAAAG+GGG | - | chr1.2:41561975-41561994 | MS.gene39143:intron | 45.0% |
| ! | GTTGAGAGTATGTCGAAAGG+GGG | - | chr1.2:41561976-41561995 | MS.gene39143:intron | 45.0% |
| ! | TACAGGGACGAATTTGGAGT+TGG | - | chr1.2:41562269-41562288 | MS.gene39143:intron | 45.0% |
| ! | TGGGTTGAGAGTATGTCGAA+AGG | - | chr1.2:41561973-41561992 | MS.gene39143:intron | 45.0% |
| ! | TGTGGTGGAGAATACAGAGA+GGG | - | chr1.2:41563841-41563860 | MS.gene39143:CDS | 45.0% |
| ! | TTGAGAGTATGTCGAAAGGG+GGG | - | chr1.2:41561977-41561996 | MS.gene39143:intron | 45.0% |
| !! | TTGTAAAAATTATATATTAT+TGG | + | chr1.2:41563305-41563324 | None:intergenic | 5.0% |
| AACACACACTGATGTGCCTG+AGG | - | chr1.2:41563714-41563733 | MS.gene39143:CDS | 50.0% | |
| ACCCTTCCGGACATTAACGT+AGG | + | chr1.2:41561710-41561729 | None:intergenic | 50.0% | |
| ACGGAACAAACGTCCACAAC+TGG | - | chr1.2:41561548-41561567 | MS.gene39143:CDS | 50.0% | |
| AGCCTACGTTAATGTCCGGA+AGG | - | chr1.2:41561705-41561724 | MS.gene39143:CDS | 50.0% | |
| CGAAGGAGAAAGGGAAGAAG+GGG | - | chr1.2:41562091-41562110 | MS.gene39143:intron | 50.0% | |
| CGGAAGGGTAAAATCATCCC+TGG | - | chr1.2:41561721-41561740 | MS.gene39143:CDS | 50.0% | |
| GACATTAACGTAGGCTTCGC+CGG | + | chr1.2:41561701-41561720 | None:intergenic | 50.0% | |
| GCCTACGTTAATGTCCGGAA+GGG | - | chr1.2:41561706-41561725 | MS.gene39143:CDS | 50.0% | |
| GCGAAGCCTACGTTAATGTC+CGG | - | chr1.2:41561701-41561720 | MS.gene39143:CDS | 50.0% | |
| GCGAAGGAGAAAGGGAAGAA+GGG | - | chr1.2:41562090-41562109 | MS.gene39143:intron | 50.0% | |
| GGAAGTTGTTCCGATTGCGA+AGG | - | chr1.2:41562074-41562093 | MS.gene39143:intron | 50.0% | |
| GGAGGGATCTCATATTCCAG+AGG | - | chr1.2:41563867-41563886 | MS.gene39143:CDS | 50.0% | |
| GGTGGAGAAGAAAAAGGAGG+TGG | - | chr1.2:41562053-41562072 | MS.gene39143:intron | 50.0% | |
| GGTTGCGGTGGAGAAGAAAA+AGG | - | chr1.2:41562047-41562066 | MS.gene39143:intron | 50.0% | |
| GTGTTTGAGGAGCCTGAATC+TGG | - | chr1.2:41563673-41563692 | MS.gene39143:CDS | 50.0% | |
| GTTCCGATTGCGAAGGAGAA+AGG | - | chr1.2:41562081-41562100 | MS.gene39143:intron | 50.0% | |
| TCCACCGCAACCGAATTCTT+CGG | + | chr1.2:41562039-41562058 | None:intergenic | 50.0% | |
| TGATGTTGCGAGCTTAGCTG+TGG | - | chr1.2:41563566-41563585 | MS.gene39143:CDS | 50.0% | |
| TGCGAAGGAGAAAGGGAAGA+AGG | - | chr1.2:41562089-41562108 | MS.gene39143:intron | 50.0% | |
| TGCGGTATATAGGGCCTGTT+TGG | - | chr1.2:41562434-41562453 | MS.gene39143:intron | 50.0% | |
| TGCGGTGGAGAAGAAAAAGG+AGG | - | chr1.2:41562050-41562069 | MS.gene39143:intron | 50.0% | |
| TGGTGGAGAATACAGAGAGG+GGG | - | chr1.2:41563843-41563862 | MS.gene39143:CDS | 50.0% | |
| TTGTGGACGTTTGTTCCGTC+TGG | + | chr1.2:41561547-41561566 | None:intergenic | 50.0% | |
| ! | ATCGCGTGACTCTGAAGGAA+AGG | - | chr1.2:41561780-41561799 | MS.gene39143:intron | 50.0% |
| ! | CTGTGGTGGAGAATACAGAG+AGG | - | chr1.2:41563840-41563859 | MS.gene39143:CDS | 50.0% |
| ! | GGAGCCTGAATCTGGAGTTA+CGG | - | chr1.2:41563681-41563700 | MS.gene39143:CDS | 50.0% |
| ! | GTGGTGGAGAATACAGAGAG+GGG | - | chr1.2:41563842-41563861 | MS.gene39143:CDS | 50.0% |
| ACGGCGAAGGAGACAAACGT+TGG | - | chr1.2:41561506-41561525 | MS.gene39143:CDS | 55.0% | |
| AGAATACAGAGAGGGGGTGG+AGG | - | chr1.2:41563849-41563868 | MS.gene39143:CDS | 55.0% | |
| ATTCGGGAATGCGACTGTGG+TGG | - | chr1.2:41563826-41563845 | MS.gene39143:CDS | 55.0% | |
| CAAACGTCCACAACTGGCAC+TGG | - | chr1.2:41561554-41561573 | MS.gene39143:CDS | 55.0% | |
| CAGATTCGGGAATGCGACTG+TGG | - | chr1.2:41563823-41563842 | MS.gene39143:CDS | 55.0% | |
| CTGATGTGCCTGAGGAAGAC+AGG | - | chr1.2:41563722-41563741 | MS.gene39143:CDS | 55.0% | |
| GAATACAGAGAGGGGGTGGA+GGG | - | chr1.2:41563850-41563869 | MS.gene39143:CDS | 55.0% | |
| GGTGAATCGCGTGACTCTGA+AGG | - | chr1.2:41561775-41561794 | MS.gene39143:intron | 55.0% | |
| TGGAGAATACAGAGAGGGGG+TGG | - | chr1.2:41563846-41563865 | MS.gene39143:CDS | 55.0% | |
| TTTCGGACCAGTGCCAGTTG+TGG | + | chr1.2:41561564-41561583 | None:intergenic | 55.0% | |
| GCCGAAGAATTCGGTTGCGG+TGG | - | chr1.2:41562035-41562054 | MS.gene39143:intron | 60.0% | |
| GTCACGCGATTCACCTTCCC+AGG | + | chr1.2:41561770-41561789 | None:intergenic | 60.0% | |
| GTCGAAAGGGGGGCCTGTTA+AGG | - | chr1.2:41561987-41562006 | MS.gene39143:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 41561496 | 41563919 | 41561496 | ID=MS.gene39143 |
| chr1.2 | mRNA | 41561496 | 41563919 | 41561496 | ID=MS.gene39143.t1;Parent=MS.gene39143 |
| chr1.2 | exon | 41563059 | 41563919 | 41563059 | ID=MS.gene39143.t1.exon1;Parent=MS.gene39143.t1 |
| chr1.2 | CDS | 41563059 | 41563919 | 41563059 | ID=cds.MS.gene39143.t1;Parent=MS.gene39143.t1 |
| chr1.2 | exon | 41561672 | 41561751 | 41561672 | ID=MS.gene39143.t1.exon2;Parent=MS.gene39143.t1 |
| chr1.2 | CDS | 41561672 | 41561751 | 41561672 | ID=cds.MS.gene39143.t1;Parent=MS.gene39143.t1 |
| chr1.2 | exon | 41561496 | 41561589 | 41561496 | ID=MS.gene39143.t1.exon3;Parent=MS.gene39143.t1 |
| chr1.2 | CDS | 41561496 | 41561589 | 41561496 | ID=cds.MS.gene39143.t1;Parent=MS.gene39143.t1 |
| Gene Sequence |
| Protein sequence |
