Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40565.t1 | XP_013464591.1 | 97.2 | 1352 | 38 | 0 | 1 | 1352 | 1 | 1352 | 0.00E+00 | 2586.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40565.t1 | F4IXE7 | 36.7 | 1271 | 648 | 25 | 1 | 1266 | 7 | 1125 | 9.5e-192 | 672.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40565.t1 | A0A072VAI1 | 97.2 | 1352 | 38 | 0 | 1 | 1352 | 1 | 1352 | 0.0e+00 | 2586.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene40565.t1 | TR | PHD |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene40565 | 0.845756 | 3.33E-59 | -1.69E-46 |
| MS.gene049159 | MS.gene40565 | 0.838919 | 2.16E-57 | -1.69E-46 |
| MS.gene049254 | MS.gene40565 | 0.802505 | 5.44E-49 | -1.69E-46 |
| MS.gene049368 | MS.gene40565 | 0.802772 | 4.79E-49 | -1.69E-46 |
| MS.gene049404 | MS.gene40565 | 0.801079 | 1.07E-48 | -1.69E-46 |
| MS.gene049435 | MS.gene40565 | 0.813235 | 2.84E-51 | -1.69E-46 |
| MS.gene049501 | MS.gene40565 | 0.856353 | 3.41E-62 | -1.69E-46 |
| MS.gene049850 | MS.gene40565 | 0.805957 | 1.04E-49 | -1.69E-46 |
| MS.gene050156 | MS.gene40565 | 0.805392 | 1.36E-49 | -1.69E-46 |
| MS.gene050442 | MS.gene40565 | 0.806638 | 7.46E-50 | -1.69E-46 |
| MS.gene05045 | MS.gene40565 | 0.802811 | 4.70E-49 | -1.69E-46 |
| MS.gene050551 | MS.gene40565 | 0.803945 | 2.74E-49 | -1.69E-46 |
| MS.gene050657 | MS.gene40565 | 0.805161 | 1.53E-49 | -1.69E-46 |
| MS.gene050689 | MS.gene40565 | 0.804835 | 1.79E-49 | -1.69E-46 |
| MS.gene050759 | MS.gene40565 | 0.804224 | 2.39E-49 | -1.69E-46 |
| MS.gene050807 | MS.gene40565 | 0.836415 | 9.48E-57 | -1.69E-46 |
| MS.gene051102 | MS.gene40565 | 0.80288 | 4.55E-49 | -1.69E-46 |
| MS.gene051180 | MS.gene40565 | 0.827451 | 1.55E-54 | -1.69E-46 |
| MS.gene051198 | MS.gene40565 | 0.830272 | 3.22E-55 | -1.69E-46 |
| MS.gene051247 | MS.gene40565 | 0.823219 | 1.56E-53 | -1.69E-46 |
| MS.gene051328 | MS.gene40565 | 0.802613 | 5.16E-49 | -1.69E-46 |
| MS.gene051577 | MS.gene40565 | 0.802933 | 4.43E-49 | -1.69E-46 |
| MS.gene05157 | MS.gene40565 | 0.803582 | 3.25E-49 | -1.69E-46 |
| MS.gene051700 | MS.gene40565 | 0.804808 | 1.81E-49 | -1.69E-46 |
| MS.gene051719 | MS.gene40565 | 0.819219 | 1.30E-52 | -1.69E-46 |
| MS.gene051720 | MS.gene40565 | 0.812682 | 3.75E-51 | -1.69E-46 |
| MS.gene051744 | MS.gene40565 | 0.812074 | 5.09E-51 | -1.69E-46 |
| MS.gene052020 | MS.gene40565 | 0.812298 | 4.55E-51 | -1.69E-46 |
| MS.gene05215 | MS.gene40565 | 0.800134 | 1.66E-48 | -1.69E-46 |
| MS.gene052307 | MS.gene40565 | 0.807716 | 4.41E-50 | -1.69E-46 |
| MS.gene052323 | MS.gene40565 | 0.817178 | 3.77E-52 | -1.69E-46 |
| MS.gene052397 | MS.gene40565 | 0.800136 | 1.66E-48 | -1.69E-46 |
| MS.gene052516 | MS.gene40565 | 0.836888 | 7.19E-57 | -1.69E-46 |
| MS.gene052582 | MS.gene40565 | 0.811063 | 8.44E-51 | -1.69E-46 |
| MS.gene052584 | MS.gene40565 | 0.822807 | 1.94E-53 | -1.69E-46 |
| MS.gene052611 | MS.gene40565 | 0.820299 | 7.38E-53 | -1.69E-46 |
| MS.gene052665 | MS.gene40565 | 0.836518 | 8.93E-57 | -1.69E-46 |
| MS.gene052773 | MS.gene40565 | 0.800535 | 1.38E-48 | -1.69E-46 |
| MS.gene052863 | MS.gene40565 | 0.829675 | 4.51E-55 | -1.69E-46 |
| MS.gene052896 | MS.gene40565 | 0.845458 | 4.01E-59 | -1.69E-46 |
| MS.gene053008 | MS.gene40565 | 0.809222 | 2.10E-50 | -1.69E-46 |
| MS.gene053079 | MS.gene40565 | 0.841569 | 4.39E-58 | -1.69E-46 |
| MS.gene053226 | MS.gene40565 | 0.811146 | 8.10E-51 | -1.69E-46 |
| MS.gene05364 | MS.gene40565 | 0.806355 | 8.56E-50 | -1.69E-46 |
| MS.gene054139 | MS.gene40565 | 0.814633 | 1.39E-51 | -1.69E-46 |
| MS.gene054467 | MS.gene40565 | 0.804756 | 1.85E-49 | -1.69E-46 |
| MS.gene054472 | MS.gene40565 | 0.81935 | 1.22E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene40565 | 0.826125 | 3.22E-54 | -1.69E-46 |
| MS.gene054775 | MS.gene40565 | 0.807906 | 4.02E-50 | -1.69E-46 |
| MS.gene05517 | MS.gene40565 | 0.821878 | 3.19E-53 | -1.69E-46 |
| MS.gene055227 | MS.gene40565 | 0.808967 | 2.39E-50 | -1.69E-46 |
| MS.gene055313 | MS.gene40565 | 0.801653 | 8.14E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene40565 | 0.825403 | 4.78E-54 | -1.69E-46 |
| MS.gene055466 | MS.gene40565 | 0.832056 | 1.18E-55 | -1.69E-46 |
| MS.gene055468 | MS.gene40565 | 0.816324 | 5.86E-52 | -1.69E-46 |
| MS.gene055469 | MS.gene40565 | 0.820113 | 8.14E-53 | -1.69E-46 |
| MS.gene055512 | MS.gene40565 | 0.803994 | 2.67E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene40565 | 0.830778 | 2.42E-55 | -1.69E-46 |
| MS.gene055623 | MS.gene40565 | 0.800596 | 1.34E-48 | -1.69E-46 |
| MS.gene055818 | MS.gene40565 | 0.820213 | 7.73E-53 | -1.69E-46 |
| MS.gene055926 | MS.gene40565 | 0.833622 | 4.80E-56 | -1.69E-46 |
| MS.gene05604 | MS.gene40565 | 0.83668 | 8.12E-57 | -1.69E-46 |
| MS.gene056050 | MS.gene40565 | 0.805479 | 1.31E-49 | -1.69E-46 |
| MS.gene056173 | MS.gene40565 | 0.840756 | 7.18E-58 | -1.69E-46 |
| MS.gene056181 | MS.gene40565 | 0.810095 | 1.37E-50 | -1.69E-46 |
| MS.gene056308 | MS.gene40565 | 0.824006 | 1.02E-53 | -1.69E-46 |
| MS.gene056366 | MS.gene40565 | 0.802583 | 5.24E-49 | -1.69E-46 |
| MS.gene056507 | MS.gene40565 | 0.82542 | 4.73E-54 | -1.69E-46 |
| MS.gene056595 | MS.gene40565 | 0.800917 | 1.15E-48 | -1.69E-46 |
| MS.gene057444 | MS.gene40565 | 0.82015 | 7.98E-53 | -1.69E-46 |
| MS.gene057446 | MS.gene40565 | 0.805537 | 1.27E-49 | -1.69E-46 |
| MS.gene057869 | MS.gene40565 | 0.837364 | 5.43E-57 | -1.69E-46 |
| MS.gene057915 | MS.gene40565 | 0.819933 | 8.95E-53 | -1.69E-46 |
| MS.gene058010 | MS.gene40565 | 0.819086 | 1.40E-52 | -1.69E-46 |
| MS.gene058625 | MS.gene40565 | 0.810002 | 1.43E-50 | -1.69E-46 |
| MS.gene058636 | MS.gene40565 | 0.861262 | 1.16E-63 | -1.69E-46 |
| MS.gene058638 | MS.gene40565 | 0.801306 | 9.58E-49 | -1.69E-46 |
| MS.gene058639 | MS.gene40565 | 0.807051 | 6.10E-50 | -1.69E-46 |
| MS.gene058852 | MS.gene40565 | 0.813452 | 2.54E-51 | -1.69E-46 |
| MS.gene059331 | MS.gene40565 | 0.818104 | 2.33E-52 | -1.69E-46 |
| MS.gene059335 | MS.gene40565 | 0.807535 | 4.82E-50 | -1.69E-46 |
| MS.gene059570 | MS.gene40565 | 0.829349 | 5.41E-55 | -1.69E-46 |
| MS.gene059713 | MS.gene40565 | 0.820066 | 8.35E-53 | -1.69E-46 |
| MS.gene059725 | MS.gene40565 | 0.886933 | 2.22E-72 | -1.69E-46 |
| MS.gene059842 | MS.gene40565 | 0.84438 | 7.84E-59 | -1.69E-46 |
| MS.gene059937 | MS.gene40565 | 0.803991 | 2.68E-49 | -1.69E-46 |
| MS.gene060296 | MS.gene40565 | 0.836452 | 9.28E-57 | -1.69E-46 |
| MS.gene060310 | MS.gene40565 | 0.800466 | 1.42E-48 | -1.69E-46 |
| MS.gene060322 | MS.gene40565 | 0.800863 | 1.18E-48 | -1.69E-46 |
| MS.gene06052 | MS.gene40565 | 0.826472 | 2.66E-54 | -1.69E-46 |
| MS.gene060572 | MS.gene40565 | 0.803798 | 2.94E-49 | -1.69E-46 |
| MS.gene060587 | MS.gene40565 | 0.805352 | 1.39E-49 | -1.69E-46 |
| MS.gene060637 | MS.gene40565 | 0.889975 | 1.50E-73 | -1.69E-46 |
| MS.gene060683 | MS.gene40565 | 0.806722 | 7.16E-50 | -1.69E-46 |
| MS.gene060685 | MS.gene40565 | 0.808649 | 2.79E-50 | -1.69E-46 |
| MS.gene060689 | MS.gene40565 | 0.810334 | 1.21E-50 | -1.69E-46 |
| MS.gene060802 | MS.gene40565 | 0.806013 | 1.01E-49 | -1.69E-46 |
| MS.gene060803 | MS.gene40565 | 0.833468 | 5.24E-56 | -1.69E-46 |
| MS.gene060998 | MS.gene40565 | 0.812969 | 3.24E-51 | -1.69E-46 |
| MS.gene061006 | MS.gene40565 | 0.808384 | 3.18E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40565.t1 | MTR_2g078040 | 97.559 | 1352 | 33 | 0 | 1 | 1352 | 1 | 1352 | 0.0 | 2739 |
| MS.gene40565.t1 | MTR_1g103830 | 39.859 | 567 | 302 | 12 | 726 | 1282 | 573 | 1110 | 5.45e-117 | 403 |
| MS.gene40565.t1 | MTR_1g072130 | 39.198 | 449 | 261 | 3 | 726 | 1166 | 776 | 1220 | 6.92e-99 | 349 |
| MS.gene40565.t1 | MTR_5g071340 | 35.317 | 521 | 312 | 12 | 685 | 1189 | 598 | 1109 | 4.60e-84 | 300 |
| MS.gene40565.t1 | MTR_3g464550 | 36.029 | 408 | 256 | 5 | 762 | 1166 | 603 | 1008 | 2.77e-80 | 288 |
| MS.gene40565.t1 | MTR_7g109640 | 35.422 | 415 | 249 | 6 | 761 | 1166 | 383 | 787 | 1.54e-75 | 268 |
| MS.gene40565.t1 | MTR_5g024390 | 34.499 | 429 | 245 | 9 | 762 | 1166 | 3 | 419 | 4.88e-72 | 248 |
| MS.gene40565.t1 | MTR_3g103110 | 32.688 | 465 | 243 | 8 | 761 | 1166 | 338 | 791 | 2.41e-71 | 256 |
| MS.gene40565.t1 | MTR_5g024500 | 34.266 | 429 | 246 | 9 | 762 | 1166 | 3 | 419 | 6.46e-71 | 244 |
| MS.gene40565.t1 | MTR_3g103120 | 35.892 | 443 | 261 | 9 | 741 | 1170 | 404 | 836 | 8.10e-67 | 243 |
| MS.gene40565.t1 | MTR_7g095140 | 34.501 | 371 | 215 | 7 | 861 | 1218 | 8 | 363 | 6.80e-64 | 222 |
| MS.gene40565.t1 | MTR_4g099530 | 28.859 | 447 | 256 | 14 | 738 | 1167 | 98 | 499 | 3.30e-49 | 184 |
| MS.gene40565.t1 | MTR_1g068930 | 29.665 | 418 | 223 | 16 | 797 | 1164 | 458 | 854 | 1.01e-44 | 176 |
| MS.gene40565.t1 | MTR_1g068930 | 29.665 | 418 | 223 | 16 | 797 | 1164 | 495 | 891 | 1.10e-44 | 176 |
| MS.gene40565.t1 | MTR_7g102610 | 26.667 | 435 | 231 | 13 | 798 | 1164 | 531 | 945 | 3.65e-35 | 146 |
| MS.gene40565.t1 | MTR_4g050090 | 26.376 | 436 | 242 | 11 | 794 | 1166 | 222 | 641 | 8.69e-34 | 141 |
| MS.gene40565.t1 | MTR_4g056990 | 25.412 | 425 | 238 | 10 | 794 | 1166 | 222 | 619 | 4.01e-33 | 137 |
| MS.gene40565.t1 | MTR_3g103160 | 28.534 | 382 | 213 | 9 | 788 | 1166 | 112 | 436 | 2.52e-32 | 132 |
| MS.gene40565.t1 | MTR_1g062330 | 25.556 | 450 | 235 | 14 | 791 | 1166 | 379 | 802 | 2.40e-31 | 133 |
| MS.gene40565.t1 | MTR_4g057290 | 25.694 | 432 | 219 | 11 | 794 | 1151 | 122 | 525 | 2.77e-31 | 131 |
| MS.gene40565.t1 | MTR_2g084425 | 36.601 | 153 | 94 | 2 | 1015 | 1166 | 868 | 1018 | 2.73e-19 | 95.1 |
| MS.gene40565.t1 | MTR_2g084425 | 29.237 | 236 | 100 | 9 | 798 | 984 | 495 | 712 | 5.21e-18 | 90.9 |
| MS.gene40565.t1 | MTR_2g084425 | 29.237 | 236 | 100 | 9 | 798 | 984 | 495 | 712 | 5.81e-18 | 90.5 |
| MS.gene40565.t1 | MTR_4g055920 | 39.759 | 83 | 36 | 2 | 850 | 918 | 387 | 469 | 3.79e-11 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40565.t1 | AT3G14980 | 51.453 | 585 | 261 | 5 | 595 | 1176 | 427 | 991 | 0.0 | 609 |
| MS.gene40565.t1 | AT3G14980 | 34.375 | 256 | 161 | 5 | 147 | 400 | 74 | 324 | 1.56e-35 | 148 |
| MS.gene40565.t1 | AT3G14980 | 51.453 | 585 | 261 | 5 | 595 | 1176 | 472 | 1036 | 0.0 | 608 |
| MS.gene40565.t1 | AT3G14980 | 31.436 | 404 | 232 | 9 | 1 | 400 | 7 | 369 | 1.45e-42 | 171 |
| MS.gene40565.t1 | AT3G14980 | 51.453 | 585 | 261 | 5 | 595 | 1176 | 472 | 1036 | 0.0 | 608 |
| MS.gene40565.t1 | AT3G14980 | 31.436 | 404 | 232 | 9 | 1 | 400 | 7 | 369 | 1.45e-42 | 171 |
| MS.gene40565.t1 | AT3G14980 | 51.453 | 585 | 261 | 5 | 595 | 1176 | 472 | 1036 | 0.0 | 608 |
| MS.gene40565.t1 | AT3G14980 | 31.436 | 404 | 232 | 9 | 1 | 400 | 7 | 369 | 1.45e-42 | 171 |
| MS.gene40565.t1 | AT3G14980 | 52.007 | 573 | 255 | 4 | 595 | 1167 | 472 | 1024 | 0.0 | 605 |
| MS.gene40565.t1 | AT3G14980 | 31.436 | 404 | 232 | 9 | 1 | 400 | 7 | 369 | 8.53e-43 | 171 |
| MS.gene40565.t1 | AT3G14980 | 48.033 | 483 | 231 | 4 | 595 | 1077 | 472 | 934 | 8.05e-144 | 462 |
| MS.gene40565.t1 | AT3G14980 | 31.436 | 404 | 232 | 9 | 1 | 400 | 7 | 369 | 4.57e-43 | 171 |
| MS.gene40565.t1 | AT5G36740 | 34.975 | 609 | 360 | 9 | 701 | 1297 | 489 | 1073 | 6.18e-114 | 386 |
| MS.gene40565.t1 | AT5G36740 | 34.975 | 609 | 360 | 9 | 701 | 1297 | 489 | 1073 | 6.18e-114 | 386 |
| MS.gene40565.t1 | AT1G05380 | 42.727 | 440 | 241 | 4 | 733 | 1166 | 491 | 925 | 9.47e-112 | 380 |
| MS.gene40565.t1 | AT1G05380 | 42.727 | 440 | 241 | 4 | 733 | 1166 | 491 | 925 | 9.47e-112 | 380 |
| MS.gene40565.t1 | AT1G05380 | 42.727 | 440 | 241 | 4 | 733 | 1166 | 491 | 925 | 9.47e-112 | 380 |
| MS.gene40565.t1 | AT5G36740 | 34.249 | 619 | 361 | 10 | 701 | 1297 | 336 | 930 | 1.28e-110 | 374 |
| MS.gene40565.t1 | AT4G14920 | 38.717 | 452 | 268 | 4 | 730 | 1177 | 548 | 994 | 2.53e-104 | 358 |
| MS.gene40565.t1 | AT4G14920 | 38.717 | 452 | 268 | 4 | 730 | 1177 | 548 | 994 | 2.54e-104 | 358 |
| MS.gene40565.t1 | AT4G14920 | 38.717 | 452 | 268 | 4 | 730 | 1177 | 548 | 994 | 2.54e-104 | 358 |
| MS.gene40565.t1 | AT5G36670 | 32.640 | 625 | 367 | 11 | 701 | 1297 | 489 | 1087 | 1.15e-100 | 349 |
| MS.gene40565.t1 | AT5G36670 | 32.640 | 625 | 367 | 11 | 701 | 1297 | 489 | 1087 | 1.15e-100 | 349 |
| MS.gene40565.t1 | AT5G36670 | 31.969 | 635 | 368 | 12 | 701 | 1297 | 336 | 944 | 1.94e-97 | 337 |
| MS.gene40565.t1 | AT5G36670 | 31.969 | 635 | 368 | 12 | 701 | 1297 | 489 | 1097 | 1.14e-96 | 338 |
| MS.gene40565.t1 | AT5G36740 | 37.864 | 412 | 243 | 5 | 701 | 1108 | 489 | 891 | 5.72e-90 | 313 |
| MS.gene40565.t1 | AT5G36740 | 37.864 | 412 | 243 | 5 | 701 | 1108 | 489 | 891 | 5.72e-90 | 313 |
| MS.gene40565.t1 | AT5G36670 | 37.864 | 412 | 243 | 5 | 701 | 1108 | 489 | 891 | 5.72e-90 | 313 |
| MS.gene40565.t1 | AT5G58610 | 36.077 | 413 | 257 | 4 | 760 | 1166 | 366 | 777 | 2.60e-82 | 290 |
| MS.gene40565.t1 | AT5G58610 | 36.077 | 413 | 257 | 4 | 760 | 1166 | 597 | 1008 | 1.61e-80 | 289 |
| MS.gene40565.t1 | AT5G58610 | 36.077 | 413 | 257 | 4 | 760 | 1166 | 597 | 1008 | 1.65e-80 | 288 |
| MS.gene40565.t1 | AT5G58610 | 36.077 | 413 | 257 | 4 | 760 | 1166 | 597 | 1008 | 1.65e-80 | 288 |
| MS.gene40565.t1 | AT5G58610 | 36.077 | 413 | 257 | 4 | 760 | 1166 | 588 | 999 | 1.74e-80 | 288 |
| MS.gene40565.t1 | AT5G58610 | 36.077 | 413 | 257 | 4 | 760 | 1166 | 588 | 999 | 2.34e-80 | 288 |
| MS.gene40565.t1 | AT5G58610 | 36.165 | 412 | 232 | 7 | 760 | 1166 | 588 | 973 | 1.40e-74 | 270 |
| MS.gene40565.t1 | AT5G58610 | 36.165 | 412 | 232 | 7 | 760 | 1166 | 588 | 973 | 1.86e-74 | 270 |
| MS.gene40565.t1 | AT5G58610 | 35.475 | 358 | 224 | 4 | 760 | 1111 | 597 | 953 | 9.93e-68 | 248 |
| MS.gene40565.t1 | AT5G58610 | 35.475 | 358 | 224 | 4 | 760 | 1111 | 588 | 944 | 1.32e-67 | 248 |
| MS.gene40565.t1 | AT5G58610 | 34.675 | 323 | 204 | 4 | 760 | 1076 | 588 | 909 | 1.05e-56 | 214 |
| MS.gene40565.t1 | AT2G37520 | 29.176 | 449 | 223 | 16 | 798 | 1181 | 410 | 828 | 7.20e-46 | 179 |
| MS.gene40565.t1 | AT3G53680 | 27.990 | 418 | 239 | 12 | 798 | 1166 | 427 | 831 | 4.51e-45 | 177 |
| MS.gene40565.t1 | AT3G53680 | 27.990 | 418 | 239 | 12 | 798 | 1166 | 429 | 833 | 5.60e-45 | 177 |
| MS.gene40565.t1 | AT5G63900 | 32.615 | 325 | 190 | 10 | 864 | 1181 | 253 | 555 | 3.26e-41 | 161 |
| MS.gene40565.t1 | AT2G27980 | 27.294 | 436 | 235 | 11 | 798 | 1166 | 637 | 1057 | 1.72e-36 | 150 |
| MS.gene40565.t1 | AT2G36720 | 26.328 | 433 | 239 | 14 | 798 | 1166 | 557 | 973 | 3.53e-33 | 140 |
| MS.gene40565.t1 | AT2G36720 | 26.328 | 433 | 239 | 14 | 798 | 1166 | 557 | 973 | 3.53e-33 | 140 |
| MS.gene40565.t1 | AT5G22760 | 40.000 | 80 | 43 | 2 | 844 | 921 | 393 | 469 | 3.33e-11 | 68.9 |
| MS.gene40565.t1 | AT5G22760 | 40.000 | 80 | 43 | 2 | 844 | 921 | 393 | 469 | 6.61e-11 | 67.8 |
| MS.gene40565.t1 | AT5G22760 | 40.000 | 80 | 43 | 2 | 844 | 921 | 118 | 194 | 6.92e-11 | 67.8 |
Find 290 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTCAGAGGCGTGTTATTTC+TGG | 0.153312 | 2.3:+19720065 | MS.gene40565:CDS |
| GCAACCTGCAACGGCCTTTA+TGG | 0.163393 | 2.3:-19722161 | None:intergenic |
| TCTTACAAGCTCTGGAAATT+TGG | 0.177960 | 2.3:+19721564 | MS.gene40565:CDS |
| TCTTTGTTGGCACTTGTTCT+TGG | 0.233184 | 2.3:-19727770 | None:intergenic |
| GATTTACCTCGGATTATCTT+TGG | 0.239558 | 2.3:-19722093 | None:intergenic |
| CTTACAAACAATACCGTCTT+TGG | 0.249129 | 2.3:-19722355 | None:intergenic |
| CATCATAGAAAACCGATTAA+TGG | 0.261943 | 2.3:+19721444 | MS.gene40565:CDS |
| AGATTGGAAATTACTACTTT+TGG | 0.262401 | 2.3:-19720374 | None:intergenic |
| TGTATTGCAAACTGCCTTTA+GGG | 0.264548 | 2.3:-19725840 | None:intergenic |
| GCCTGTTTGCCGAGCTCTCC+TGG | 0.266619 | 2.3:-19720622 | None:intergenic |
| TTGTATTGCAAACTGCCTTT+AGG | 0.269161 | 2.3:-19725841 | None:intergenic |
| CTTCGACATACATATCTTCT+TGG | 0.269910 | 2.3:-19721408 | None:intergenic |
| GGCTTATCAATGGTGGATTA+TGG | 0.282618 | 2.3:+19721084 | MS.gene40565:CDS |
| TGCGGGAATTTACAAAAGTT+TGG | 0.284793 | 2.3:+19720906 | MS.gene40565:CDS |
| CAGAATTATCTTTAGGGTTT+CGG | 0.291247 | 2.3:-19722311 | None:intergenic |
| TTGTCGGATTTGTGGAAATT+TGG | 0.293006 | 2.3:+19723437 | MS.gene40565:CDS |
| TCTCAAACCCCTTGATTTGC+CGG | 0.296305 | 2.3:-19722127 | None:intergenic |
| TAGTGACAGAATTATCTTTA+GGG | 0.301426 | 2.3:-19722317 | None:intergenic |
| TTAGTGACAGAATTATCTTT+AGG | 0.306142 | 2.3:-19722318 | None:intergenic |
| AGGCATTTCCTCAGTTCTTA+AGG | 0.307406 | 2.3:-19720693 | None:intergenic |
| AGCAGATATTTCTGTGGTTC+TGG | 0.307947 | 2.3:-19721341 | None:intergenic |
| GGAAGCATCAACGGCCTTCT+AGG | 0.311431 | 2.3:+19720840 | MS.gene40565:CDS |
| GGGGATCCTCTTGGTCCAGC+TGG | 0.316151 | 2.3:-19720760 | None:intergenic |
| AGTTTCTAGTAAGGGTAAAA+TGG | 0.318918 | 2.3:+19721192 | MS.gene40565:CDS |
| CTCTTTACCTGCTTGTGCAT+TGG | 0.321273 | 2.3:+19721501 | MS.gene40565:CDS |
| AGGGTTTCAATCTTCTAATA+TGG | 0.322799 | 2.3:+19720718 | MS.gene40565:CDS |
| GTCAGCAATACTCAAGAATA+AGG | 0.324948 | 2.3:+19722062 | MS.gene40565:CDS |
| GGTATCAGCCATTCCGGATT+TGG | 0.327959 | 2.3:+19727041 | MS.gene40565:CDS |
| ACGATGTCAGGATGGTCTAT+TGG | 0.345468 | 2.3:+19720818 | MS.gene40565:CDS |
| TGTTGAAGAGTCGCAGAAAA+TGG | 0.348382 | 2.3:-19721314 | None:intergenic |
| AGGAATAAGAAGAAGTTATC+AGG | 0.349234 | 2.3:+19721943 | MS.gene40565:CDS |
| TCTTTACCTGCTTGTGCATT+GGG | 0.350138 | 2.3:+19721502 | MS.gene40565:CDS |
| ATTTACCTCGGATTATCTTT+GGG | 0.353678 | 2.3:-19722092 | None:intergenic |
| TTTGATGTTCTTACAAGCTC+TGG | 0.353731 | 2.3:+19721556 | MS.gene40565:CDS |
| TCCACATTGTTTCCTTCAAA+AGG | 0.353806 | 2.3:-19727743 | None:intergenic |
| ACATAGCAGCGGTCTCTGGC+TGG | 0.354391 | 2.3:-19721060 | None:intergenic |
| GTCAGTGAGCAAAAGTAGTA+TGG | 0.356687 | 2.3:+19721471 | MS.gene40565:CDS |
| GAGACTTGGACCAAGGGCTT+TGG | 0.358747 | 2.3:+19727066 | MS.gene40565:CDS |
| TGCCCAGTGGTTTGCCCTAA+AGG | 0.364177 | 2.3:+19725826 | MS.gene40565:CDS |
| GGCATTTCCTCAGTTCTTAA+GGG | 0.364655 | 2.3:-19720692 | None:intergenic |
| CCTGGCTTGTTTGTCCGCTC+AGG | 0.376452 | 2.3:+19722641 | MS.gene40565:CDS |
| TTCTTCACAACAGTGATTGA+TGG | 0.378982 | 2.3:-19720659 | None:intergenic |
| TCACTGACATTTCCATTAAT+CGG | 0.381706 | 2.3:-19721456 | None:intergenic |
| GGATTCATGTTCAAGGTTGA+TGG | 0.381848 | 2.3:-19720090 | None:intergenic |
| CACTTTGCCTCCTTCAAGCT+TGG | 0.382263 | 2.3:+19722481 | MS.gene40565:CDS |
| GAGGACAAGAATATCAATAT+AGG | 0.382323 | 2.3:+19727821 | MS.gene40565:CDS |
| CGATGTCAGGATGGTCTATT+GGG | 0.382324 | 2.3:+19720819 | MS.gene40565:CDS |
| GTTATACCACAGTGACATAC+TGG | 0.382734 | 2.3:+19721813 | MS.gene40565:CDS |
| GACTCCATCCACCGCCTAGA+AGG | 0.382818 | 2.3:-19720854 | None:intergenic |
| GTCTTCAATATGGCATCTAT+TGG | 0.383368 | 2.3:-19722025 | None:intergenic |
| CCCCTCTTCCTCACTGCATT+CGG | 0.383952 | 2.3:-19721671 | None:intergenic |
| TTACTTACAGACACCTCCTT+TGG | 0.385712 | 2.3:-19720578 | None:intergenic |
| ATAGATCGTCGTCTTCAATA+TGG | 0.391308 | 2.3:-19722035 | None:intergenic |
| AGAAAGCTTAAAAGCCATAA+AGG | 0.391365 | 2.3:+19722147 | MS.gene40565:CDS |
| CTAGCCGTTGAAATGGCATT+AGG | 0.395663 | 2.3:+19727668 | MS.gene40565:CDS |
| AGATTCAGTGCCATCTTTGT+TGG | 0.396173 | 2.3:-19727783 | None:intergenic |
| GCCAACATAGCAGCGGTCTC+TGG | 0.399885 | 2.3:-19721064 | None:intergenic |
| AACAAAGATGGCACTGAATC+TGG | 0.401221 | 2.3:+19727785 | MS.gene40565:CDS |
| AAAGCCATAAAGGCCGTTGC+AGG | 0.401617 | 2.3:+19722157 | MS.gene40565:CDS |
| TTCTCCAAGGCTGAATCAAC+TGG | 0.404150 | 2.3:-19721253 | None:intergenic |
| GATGGGAAGAAGTATTATCT+TGG | 0.404793 | 2.3:+19722222 | MS.gene40565:CDS |
| GCTTGTGGTATCAGCCATTC+CGG | 0.405683 | 2.3:+19727035 | MS.gene40565:CDS |
| TCACTGTCGGCCCTATTGTC+TGG | 0.406621 | 2.3:-19727623 | None:intergenic |
| ATCTTTCTTCTTGCCATACA+AGG | 0.409056 | 2.3:-19727175 | None:intergenic |
| TTGTAGCTTAGTTTCTAGTA+AGG | 0.414170 | 2.3:+19721183 | MS.gene40565:CDS |
| TGTAAATCTAAAACAGAAGA+TGG | 0.414639 | 2.3:+19720548 | MS.gene40565:CDS |
| CTCAAATTCATTGTCCCAGC+TGG | 0.416591 | 2.3:+19720745 | MS.gene40565:CDS |
| AACTGCACTTGTCGGATTTG+TGG | 0.417174 | 2.3:+19723429 | MS.gene40565:CDS |
| AGTACATGGTCTTCCTCTAA+TGG | 0.417552 | 2.3:+19721730 | MS.gene40565:CDS |
| CCCAGGAGAGCTCGGCAAAC+AGG | 0.418100 | 2.3:+19720621 | MS.gene40565:CDS |
| GCATTCCAATGAGACTGCTC+TGG | 0.418538 | 2.3:+19720220 | MS.gene40565:CDS |
| TTAGAAGATTGAAACCCTTC+AGG | 0.419051 | 2.3:-19720713 | None:intergenic |
| TAATCTCTGTAGCGTCTATC+AGG | 0.419990 | 2.3:+19726187 | MS.gene40565:CDS |
| GTAATGAAAACTCGGTCATA+TGG | 0.420439 | 2.3:+19720144 | MS.gene40565:CDS |
| GCCGAGCTCTCCTGGGATAC+AGG | 0.421895 | 2.3:-19720614 | None:intergenic |
| CCACATTGTTTCCTTCAAAA+GGG | 0.424436 | 2.3:-19727742 | None:intergenic |
| AACACTCCTCCATGATTGTA+AGG | 0.425031 | 2.3:-19725877 | None:intergenic |
| TAATGGAGGGAAGCACAATA+TGG | 0.426611 | 2.3:+19722200 | MS.gene40565:CDS |
| TTATGCGATGATAACTTTGA+AGG | 0.431195 | 2.3:+19719981 | MS.gene40565:CDS |
| TTCCGGATTTGGTGGAGACT+TGG | 0.432477 | 2.3:+19727052 | MS.gene40565:CDS |
| ATGCAGTACCAGTTGCCATC+GGG | 0.435695 | 2.3:-19723405 | None:intergenic |
| CGAGGCGTCGGCACATTCCT+TGG | 0.436112 | 2.3:-19726530 | None:intergenic |
| CAAAAGAGGAAGCACTTGAA+TGG | 0.439006 | 2.3:-19721537 | None:intergenic |
| AGCTGTTGCCCTTACAATCA+TGG | 0.439519 | 2.3:+19725868 | MS.gene40565:CDS |
| GAGCTAAATCCGGCAAATCA+AGG | 0.439675 | 2.3:+19722118 | MS.gene40565:CDS |
| CTATGTATTGAAGCATAACT+TGG | 0.442380 | 2.3:+19720481 | MS.gene40565:CDS |
| TACTTACAGACACCTCCTTT+GGG | 0.442900 | 2.3:-19720577 | None:intergenic |
| ATGGGAAGAAGTATTATCTT+GGG | 0.444935 | 2.3:+19722223 | MS.gene40565:CDS |
| AGGAGATCCCCGATGGCAAC+TGG | 0.446236 | 2.3:+19723397 | MS.gene40565:intron |
| GGGAAAGGACTCTCTTGTCC+TGG | 0.450075 | 2.3:+19722244 | MS.gene40565:CDS |
| TAACTAGCCCAACCTGAGAT+TGG | 0.450900 | 2.3:-19725736 | None:intergenic |
| GTCCAAGTCTCCACCAAATC+CGG | 0.451097 | 2.3:-19727054 | None:intergenic |
| CTCAGTTCTTAAGGGAGACT+CGG | 0.453639 | 2.3:-19720684 | None:intergenic |
| ACACCCCAGAGCAGTCTCAT+TGG | 0.454881 | 2.3:-19720225 | None:intergenic |
| TAATATTCTAGCCGTTGAAA+TGG | 0.457114 | 2.3:+19727661 | MS.gene40565:CDS |
| GAAAGGTCGGTGCTCTGAAA+AGG | 0.461188 | 2.3:+19721137 | MS.gene40565:CDS |
| ATAAGCACGCATCAGAAAAT+CGG | 0.464398 | 2.3:+19721647 | MS.gene40565:CDS |
| CCTCCATTACAAGGATTCCT+TGG | 0.464662 | 2.3:-19722186 | None:intergenic |
| AAATGTATAACTACTACAAA+AGG | 0.468270 | 2.3:-19721109 | None:intergenic |
| AAAGGAGGTGTCTGTAAGTA+AGG | 0.469927 | 2.3:+19720580 | MS.gene40565:CDS |
| TTGTGCTTCCCTCCATTACA+AGG | 0.472119 | 2.3:-19722195 | None:intergenic |
| GGGATCAACTATTACTGATC+AGG | 0.473332 | 2.3:+19721834 | MS.gene40565:CDS |
| AATCATTGCCGCTAGATGTT+GGG | 0.474736 | 2.3:+19727537 | MS.gene40565:CDS |
| AGCTAAATCCGGCAAATCAA+GGG | 0.474850 | 2.3:+19722119 | MS.gene40565:CDS |
| TGAAGGAGGCAAAGTGTAAA+GGG | 0.475613 | 2.3:-19722474 | None:intergenic |
| TACTTATTTGCAGAGTGCAC+GGG | 0.476339 | 2.3:+19726457 | MS.gene40565:intron |
| TAATATTGGTCCATTCCTTA+CGG | 0.477055 | 2.3:-19720982 | None:intergenic |
| GCCAGAGACCGCTGCTATGT+TGG | 0.477658 | 2.3:+19721063 | MS.gene40565:CDS |
| GAATCATTGCCGCTAGATGT+TGG | 0.478167 | 2.3:+19727536 | MS.gene40565:CDS |
| CATTCCAATGAGACTGCTCT+GGG | 0.482728 | 2.3:+19720221 | MS.gene40565:CDS |
| ATCTCTGCTGATTTCACTGT+CGG | 0.484434 | 2.3:-19727636 | None:intergenic |
| TCAGAGTTCAAGATTCATGC+TGG | 0.484938 | 2.3:+19722402 | MS.gene40565:CDS |
| CACGATATGAAACTGCAGTA+AGG | 0.485144 | 2.3:-19720786 | None:intergenic |
| ACAAAAGTTTGGAGGTTATG+TGG | 0.488276 | 2.3:+19720917 | MS.gene40565:CDS |
| TGCTCCAGTTGATTCAGCCT+TGG | 0.488276 | 2.3:+19721249 | MS.gene40565:CDS |
| AAATTTGGTCATTGATAAAG+AGG | 0.488780 | 2.3:+19723452 | MS.gene40565:CDS |
| TTTGGTGGAGACTTGGACCA+AGG | 0.489098 | 2.3:+19727059 | MS.gene40565:CDS |
| TATCAATATAGGTGAAGTAA+AGG | 0.490068 | 2.3:+19727832 | MS.gene40565:CDS |
| CTGCCTTTAGGGCAAACCAC+TGG | 0.490234 | 2.3:-19725829 | None:intergenic |
| ATGAAACTGCAGTAAGGGAC+GGG | 0.490288 | 2.3:-19720780 | None:intergenic |
| TCAATGTTAGATCTAAGAAC+AGG | 0.491121 | 2.3:+19725905 | MS.gene40565:CDS |
| TCCTGTATCCCAGGAGAGCT+CGG | 0.492443 | 2.3:+19720613 | MS.gene40565:CDS |
| ATTCAGCTGACCAAGCTTGA+AGG | 0.493841 | 2.3:-19722491 | None:intergenic |
| GTGCAGTTGCTTACGATGTC+AGG | 0.495290 | 2.3:+19720806 | MS.gene40565:CDS |
| AAAGGTCGGTGCTCTGAAAA+GGG | 0.495460 | 2.3:+19721138 | MS.gene40565:CDS |
| TCTTCACAAGTTAAACTCTC+TGG | 0.495860 | 2.3:-19720251 | None:intergenic |
| GCCGTTGCAGGTTGCTGCCA+AGG | 0.496197 | 2.3:+19722169 | MS.gene40565:CDS |
| GTCCGAATGCAGTGAGGAAG+AGG | 0.497959 | 2.3:+19721669 | MS.gene40565:CDS |
| TGTAGCAGCACAAGTCAGAT+TGG | 0.498335 | 2.3:-19720390 | None:intergenic |
| AAAAGAGGAAGCACTTGAAT+GGG | 0.498815 | 2.3:-19721536 | None:intergenic |
| AAGTTGCTGATGGCTTCGCC+TGG | 0.499966 | 2.3:+19725762 | MS.gene40565:CDS |
| GTACTCTCCAATCTCAGGTT+GGG | 0.502494 | 2.3:+19725729 | MS.gene40565:CDS |
| TAAAGATAATTCTGTCACTA+AGG | 0.505718 | 2.3:+19722320 | MS.gene40565:CDS |
| AAATGCGGAAGAAGTGCAAA+AGG | 0.506972 | 2.3:+19721767 | MS.gene40565:CDS |
| CTAGTTAATCAAGTTGCTGA+TGG | 0.508104 | 2.3:+19725752 | MS.gene40565:CDS |
| GATAATTCTGTCACTAAGGA+TGG | 0.508843 | 2.3:+19722324 | MS.gene40565:CDS |
| CTATGTTGGCTTATCAATGG+TGG | 0.510809 | 2.3:+19721077 | MS.gene40565:CDS |
| AGGTACCTGCTCTGAAGGAA+TGG | 0.513613 | 2.3:+19727505 | MS.gene40565:CDS |
| ACAGAGACAAGTAGGTCTTT+CGG | 0.513765 | 2.3:+19727704 | MS.gene40565:CDS |
| AAGGAGCTGTTTCAGACACT+TGG | 0.514893 | 2.3:+19724014 | MS.gene40565:CDS |
| GTAAGGGACGGGGATCCTCT+TGG | 0.515414 | 2.3:-19720769 | None:intergenic |
| TTGAAGGAGGCAAAGTGTAA+AGG | 0.516368 | 2.3:-19722475 | None:intergenic |
| GGGATCCTCTTGGTCCAGCT+GGG | 0.517919 | 2.3:-19720759 | None:intergenic |
| AGGAAAAGTCAAAATCAAGC+TGG | 0.520615 | 2.3:+19722522 | MS.gene40565:CDS |
| ATCTCCTAATGCCATTTCAA+CGG | 0.521699 | 2.3:-19727672 | None:intergenic |
| ATACTGTACTCTCCAATCTC+AGG | 0.522025 | 2.3:+19725724 | MS.gene40565:CDS |
| TCGTGCGGGATGTGTGGCGA+GGG | 0.522169 | 2.3:+19722576 | MS.gene40565:CDS |
| TTTCAGTGCACTCGATAGAT+CGG | 0.523254 | 2.3:-19721017 | None:intergenic |
| CCTGTTTGCCGAGCTCTCCT+GGG | 0.525134 | 2.3:-19720621 | None:intergenic |
| ACTGCATAAACTGCACTTGT+CGG | 0.525485 | 2.3:+19723421 | MS.gene40565:CDS |
| GAAAAGTGCAATGTAACATA+TGG | 0.527585 | 2.3:+19720956 | MS.gene40565:CDS |
| ACGGCCTTCTAGGCGGTGGA+TGG | 0.528700 | 2.3:+19720850 | MS.gene40565:CDS |
| CACATTGTTTCCTTCAAAAG+GGG | 0.530459 | 2.3:-19727741 | None:intergenic |
| GGAGGGAAGCACAATATGGA+TGG | 0.532829 | 2.3:+19722204 | MS.gene40565:CDS |
| CTGCCAAGGAATCCTTGTAA+TGG | 0.532876 | 2.3:+19722183 | MS.gene40565:CDS |
| ACTGGGCAGAATGAACCTTC+TGG | 0.533301 | 2.3:-19725811 | None:intergenic |
| CATAGCAGCGGTCTCTGGCT+GGG | 0.534441 | 2.3:-19721059 | None:intergenic |
| AGTTGCTTCTCCTGTATCCC+AGG | 0.534835 | 2.3:+19720604 | MS.gene40565:CDS |
| CATTAATGTCCTCCTCGGGA+TGG | 0.535370 | 2.3:-19720190 | None:intergenic |
| TCATTCTACAAGACACCAAA+GGG | 0.537045 | 2.3:+19720875 | MS.gene40565:CDS |
| GTCCTGGTTGATTGAGAATG+AGG | 0.538570 | 2.3:+19722260 | MS.gene40565:CDS |
| TATGTCCATTCCTTCAGAGC+AGG | 0.538738 | 2.3:-19727510 | None:intergenic |
| ATTAATGTCCTCCTCGGGAT+GGG | 0.538952 | 2.3:-19720189 | None:intergenic |
| ACAGATGAATCATTCAAAGT+AGG | 0.539589 | 2.3:+19727485 | MS.gene40565:CDS |
| TGTAGCTTAGTTTCTAGTAA+GGG | 0.540257 | 2.3:+19721184 | MS.gene40565:CDS |
| AAGAATCAACAGAGACAAGT+AGG | 0.542130 | 2.3:+19727696 | MS.gene40565:CDS |
| AGAACAAGTGCCAACAAAGA+TGG | 0.542324 | 2.3:+19727773 | MS.gene40565:CDS |
| GCTTGTAAGAACATCAAAAG+AGG | 0.544988 | 2.3:-19721551 | None:intergenic |
| GGTAAATCTAGAGCTAAATC+CGG | 0.545226 | 2.3:+19722108 | MS.gene40565:CDS |
| GGGAATTTACAAAAGTTTGG+AGG | 0.545872 | 2.3:+19720909 | MS.gene40565:CDS |
| CATATGGAGGCCGTAAGGAA+TGG | 0.545990 | 2.3:+19720972 | MS.gene40565:CDS |
| TATGCAGTACCAGTTGCCAT+CGG | 0.546058 | 2.3:-19723406 | None:intergenic |
| TTACTTATTTGCAGAGTGCA+CGG | 0.546128 | 2.3:+19726456 | MS.gene40565:intron |
| AGATATTTCTGTGGTTCTGG+TGG | 0.546610 | 2.3:-19721338 | None:intergenic |
| AAAGTAGGTACCTGCTCTGA+AGG | 0.547142 | 2.3:+19727500 | MS.gene40565:CDS |
| ATCAGCCATTCCGGATTTGG+TGG | 0.549329 | 2.3:+19727044 | MS.gene40565:CDS |
| AACGCAGCTACCAACGGAGT+TGG | 0.550296 | 2.3:+19727560 | MS.gene40565:CDS |
| TTGGTGGAGACTTGGACCAA+GGG | 0.551309 | 2.3:+19727060 | MS.gene40565:CDS |
| GGTCAGCTGAATACAAAGCC+AGG | 0.551424 | 2.3:+19722502 | MS.gene40565:CDS |
| GAACTGAGGAAATGCCTGAA+GGG | 0.554617 | 2.3:+19720699 | MS.gene40565:CDS |
| CAGAGTTCAAGATTCATGCT+GGG | 0.555544 | 2.3:+19722403 | MS.gene40565:CDS |
| TGTACTCTCCAATCTCAGGT+TGG | 0.558790 | 2.3:+19725728 | MS.gene40565:CDS |
| CAATGCACAAGCAGGTAAAG+AGG | 0.560004 | 2.3:-19721500 | None:intergenic |
| TGCTCTGAAAAGGGGAGAAG+AGG | 0.562026 | 2.3:+19721147 | MS.gene40565:CDS |
| CTGCTATGTTGGCTTATCAA+TGG | 0.562385 | 2.3:+19721074 | MS.gene40565:CDS |
| CCAAGGAATCCTTGTAATGG+AGG | 0.564973 | 2.3:+19722186 | MS.gene40565:CDS |
| TGCGGGATGTGTGGCGAGGG+AGG | 0.566124 | 2.3:+19722579 | MS.gene40565:CDS |
| TGTTTGTAAGTGTTGCGGTA+AGG | 0.566558 | 2.3:+19722368 | MS.gene40565:CDS |
| AATTGCATTAATGTCCTCCT+CGG | 0.568030 | 2.3:-19720195 | None:intergenic |
| TCCTTGGCAGCAACCTGCAA+CGG | 0.568056 | 2.3:-19722170 | None:intergenic |
| TGCCTTTAGGGCAAACCACT+GGG | 0.568420 | 2.3:-19725828 | None:intergenic |
| GGTCTATTGGGAAGCATCAA+CGG | 0.572145 | 2.3:+19720831 | MS.gene40565:CDS |
| ATCAACGGCCTTCTAGGCGG+TGG | 0.573019 | 2.3:+19720846 | MS.gene40565:CDS |
| ATTTAGCTCTAGATTTACCT+CGG | 0.576101 | 2.3:-19722104 | None:intergenic |
| TATGGCAAGAAGAAAGATGA+AGG | 0.578063 | 2.3:+19727180 | MS.gene40565:CDS |
| ATTGCATTAATGTCCTCCTC+GGG | 0.578795 | 2.3:-19720194 | None:intergenic |
| TATGCATCTAAGAAGCGTCC+AGG | 0.578923 | 2.3:-19725780 | None:intergenic |
| AGAAGTATTATCTTGGGGAA+AGG | 0.579920 | 2.3:+19722229 | MS.gene40565:CDS |
| TCCGAATGCAGTGAGGAAGA+GGG | 0.582823 | 2.3:+19721670 | MS.gene40565:CDS |
| CCTCTTCGATTGAGCTCACG+AGG | 0.585279 | 2.3:-19726548 | None:intergenic |
| GCAGATGTTAATATCTGTCA+AGG | 0.585666 | 2.3:+19727005 | MS.gene40565:intron |
| GGAAAAGTCAAAATCAAGCT+GGG | 0.586183 | 2.3:+19722523 | MS.gene40565:CDS |
| ACGATATGAAACTGCAGTAA+GGG | 0.588666 | 2.3:-19720785 | None:intergenic |
| GTAAATCTAAAACAGAAGAT+GGG | 0.588848 | 2.3:+19720549 | MS.gene40565:CDS |
| AAGCTCTGGAAATTTGGACT+CGG | 0.589561 | 2.3:+19721570 | MS.gene40565:CDS |
| CATAAAAGCAGATATTTCTG+TGG | 0.590266 | 2.3:-19721347 | None:intergenic |
| GTGCTACCCAATGCACAAGC+AGG | 0.590716 | 2.3:-19721508 | None:intergenic |
| GGTATTGTTTGTAAGTGTTG+CGG | 0.590744 | 2.3:+19722363 | MS.gene40565:CDS |
| AGAACTGAGGAAATGCCTGA+AGG | 0.590783 | 2.3:+19720698 | MS.gene40565:CDS |
| TGCAGTCGGTATCGTCGCCA+AGG | 0.591449 | 2.3:+19726513 | MS.gene40565:CDS |
| ACAAGCCAGGTGAAAAGTAG+AGG | 0.596794 | 2.3:-19722628 | None:intergenic |
| TTCATGAAAAGATTCAAGCA+AGG | 0.598939 | 2.3:-19722441 | None:intergenic |
| GGAGAAAGAGATAAACAAGA+AGG | 0.599516 | 2.3:+19723995 | MS.gene40565:CDS |
| ATAGATCACAAGAAATGCCT+CGG | 0.601206 | 2.3:+19723974 | MS.gene40565:intron |
| TGACTTAGCACCAACTCCGT+TGG | 0.603644 | 2.3:-19727570 | None:intergenic |
| CGACTGCAAGTTGCGATCAG+AGG | 0.604252 | 2.3:-19726498 | None:intergenic |
| TGTAACATATGGAGGCCGTA+AGG | 0.604720 | 2.3:+19720967 | MS.gene40565:CDS |
| CTCTGATCGCAACTTGCAGT+CGG | 0.604744 | 2.3:+19726499 | MS.gene40565:CDS |
| AAGAGTCGCAGAAAATGGCT+TGG | 0.606421 | 2.3:-19721309 | None:intergenic |
| TGGCTCTAGTAATGAAAACT+CGG | 0.607891 | 2.3:+19720136 | MS.gene40565:CDS |
| GAGGGAAGCACAATATGGAT+GGG | 0.610826 | 2.3:+19722205 | MS.gene40565:CDS |
| CAAGGAATCCTTGTAATGGA+GGG | 0.611447 | 2.3:+19722187 | MS.gene40565:CDS |
| GATCAGGTGCAGTCACTGAA+TGG | 0.612010 | 2.3:+19721850 | MS.gene40565:CDS |
| TCATGAAAAGATTCAAGCAA+GGG | 0.612212 | 2.3:-19722440 | None:intergenic |
| GATTATGTAGTTGACAGTGT+GGG | 0.613261 | 2.3:+19721913 | MS.gene40565:CDS |
| ATGCATACATGATGACCAGA+AGG | 0.615544 | 2.3:+19725796 | MS.gene40565:CDS |
| CGATTGAGCTCACGAGGCGT+CGG | 0.616069 | 2.3:-19726542 | None:intergenic |
| ACTTGTAAACAGACATCTGA+CGG | 0.618327 | 2.3:+19721382 | MS.gene40565:CDS |
| CTTGTTTATCTCTTTCTCCG+AGG | 0.619582 | 2.3:-19723991 | None:intergenic |
| CCTGAGCGGACAAACAAGCC+AGG | 0.619982 | 2.3:-19722641 | None:intergenic |
| GTCATTCTACAAGACACCAA+AGG | 0.620823 | 2.3:+19720874 | MS.gene40565:CDS |
| TATGAAACTGCAGTAAGGGA+CGG | 0.621118 | 2.3:-19720781 | None:intergenic |
| TGGGAAGAAGTATTATCTTG+GGG | 0.622625 | 2.3:+19722224 | MS.gene40565:CDS |
| AGAGGGGAGGAAAATCTCAA+TGG | 0.625624 | 2.3:+19721687 | MS.gene40565:CDS |
| AAGTGCAATGTAACATATGG+AGG | 0.626670 | 2.3:+19720959 | MS.gene40565:CDS |
| TTATACCACAGTGACATACT+GGG | 0.629773 | 2.3:+19721814 | MS.gene40565:CDS |
| AGTCTCCACCAAATCCGGAA+TGG | 0.630263 | 2.3:-19727049 | None:intergenic |
| CCTCGTGAGCTCAATCGAAG+AGG | 0.632766 | 2.3:+19726548 | MS.gene40565:CDS |
| AGGTACGAATCCAAAGCCCT+TGG | 0.633630 | 2.3:-19727076 | None:intergenic |
| GTTGGGAACGCAGCTACCAA+CGG | 0.634261 | 2.3:+19727554 | MS.gene40565:CDS |
| TGCAGTACCAGTTGCCATCG+GGG | 0.634578 | 2.3:-19723404 | None:intergenic |
| CAAGCCAGGTGAAAAGTAGA+GGG | 0.635588 | 2.3:-19722627 | None:intergenic |
| TAAGTCAGAGTGTGAGCCTG+TGG | 0.635910 | 2.3:+19727586 | MS.gene40565:CDS |
| CCCCAATTGAATAAAACTTG+GGG | 0.636059 | 2.3:-19725941 | None:intergenic |
| GATGATTCGTGCGGGATGTG+TGG | 0.636535 | 2.3:+19722570 | MS.gene40565:CDS |
| CAGCTGACCAAGCTTGAAGG+AGG | 0.636561 | 2.3:-19722488 | None:intergenic |
| GACAGAAATGATGATTCGTG+CGG | 0.639414 | 2.3:+19722561 | MS.gene40565:CDS |
| GATCAGAGGCATCTCTGCAA+CGG | 0.639829 | 2.3:-19726484 | None:intergenic |
| TTCGTGCGGGATGTGTGGCG+AGG | 0.640997 | 2.3:+19722575 | MS.gene40565:CDS |
| ACACTCCTCCATGATTGTAA+GGG | 0.641759 | 2.3:-19725876 | None:intergenic |
| ATTGTCCCAGCTGGACCAAG+AGG | 0.642028 | 2.3:+19720754 | MS.gene40565:CDS |
| TCACTGTGGTATAACATACT+CGG | 0.642929 | 2.3:-19721805 | None:intergenic |
| TTCAACCCAAAGATAATCCG+AGG | 0.645039 | 2.3:+19722087 | MS.gene40565:CDS |
| GCTGCGTTCCCAACATCTAG+CGG | 0.645233 | 2.3:-19727545 | None:intergenic |
| CCGAATGCAGTGAGGAAGAG+GGG | 0.646708 | 2.3:+19721671 | MS.gene40565:CDS |
| GTACATCAGGAGATCCCCGA+TGG | 0.647931 | 2.3:+19723390 | MS.gene40565:intron |
| GGCTTTGGATTCGTACCTGT+AGG | 0.648737 | 2.3:+19727081 | MS.gene40565:CDS |
| AGTTGCTTACGATGTCAGGA+TGG | 0.648897 | 2.3:+19720810 | MS.gene40565:CDS |
| GATGGCAAGATCACCAAAGA+CGG | 0.649596 | 2.3:+19722342 | MS.gene40565:CDS |
| CGAGTCTCCCTTAAGAACTG+AGG | 0.650233 | 2.3:+19720685 | MS.gene40565:CDS |
| TGAAACTGCAGTAAGGGACG+GGG | 0.651622 | 2.3:-19720779 | None:intergenic |
| AGAAGGTTCATTCTGCCCAG+TGG | 0.652269 | 2.3:+19725813 | MS.gene40565:CDS |
| AGATGGGAACATCCCAAAGG+AGG | 0.652411 | 2.3:+19720565 | MS.gene40565:CDS |
| ATGGGTAATTCTTGAAGACG+AGG | 0.652819 | 2.3:-19720171 | None:intergenic |
| AAAGATGGCACTGAATCTGG+TGG | 0.653852 | 2.3:+19727788 | MS.gene40565:CDS |
| ACAGAAATGATGATTCGTGC+GGG | 0.656042 | 2.3:+19722562 | MS.gene40565:CDS |
| AGTGTGAGACGTATTCTCCA+AGG | 0.656359 | 2.3:-19721266 | None:intergenic |
| TTGTAGTCAAAGTTGTCGGG+AGG | 0.657809 | 2.3:+19724039 | MS.gene40565:CDS |
| GCTAAATCCGGCAAATCAAG+GGG | 0.658194 | 2.3:+19722120 | MS.gene40565:CDS |
| GACCTCATTCTCAATCAACC+AGG | 0.658446 | 2.3:-19722262 | None:intergenic |
| TTCAAGAATTACCCATCCCG+AGG | 0.658849 | 2.3:+19720178 | MS.gene40565:CDS |
| AGCATCAACGGCCTTCTAGG+CGG | 0.659757 | 2.3:+19720843 | MS.gene40565:CDS |
| AAGGTCGGTGCTCTGAAAAG+GGG | 0.660345 | 2.3:+19721139 | MS.gene40565:CDS |
| AAGAATTACCCATCCCGAGG+AGG | 0.661839 | 2.3:+19720181 | MS.gene40565:CDS |
| AGATTATGTAGTTGACAGTG+TGG | 0.662266 | 2.3:+19721912 | MS.gene40565:CDS |
| TGTCAAGGTAGAAAAGCTTG+TGG | 0.662950 | 2.3:+19727020 | MS.gene40565:CDS |
| TCACTGAATGGTGATGTATG+TGG | 0.664461 | 2.3:+19721862 | MS.gene40565:CDS |
| ATGTGGCACTCAGACTGTGT+TGG | 0.664733 | 2.3:+19721879 | MS.gene40565:CDS |
| TCTGAATTAGATCTACTACA+AGG | 0.675132 | 2.3:-19720329 | None:intergenic |
| ATAAAACTTGGGGTATCATG+TGG | 0.677341 | 2.3:-19725931 | None:intergenic |
| AATGCAGTGAGGAAGAGGGG+AGG | 0.683933 | 2.3:+19721674 | MS.gene40565:CDS |
| AGAAGATGGGAACATCCCAA+AGG | 0.696645 | 2.3:+19720562 | MS.gene40565:CDS |
| TTGATAAGCCAACATAGCAG+CGG | 0.700445 | 2.3:-19721071 | None:intergenic |
| TGGGTAATTCTTGAAGACGA+GGG | 0.715551 | 2.3:-19720170 | None:intergenic |
| AAATCGGTCCGAATGCAGTG+AGG | 0.724403 | 2.3:+19721663 | MS.gene40565:CDS |
| CCGAGTGCAACTGACCTGAG+CGG | 0.727239 | 2.3:-19722655 | None:intergenic |
| ACAATTGAATCATCTAAACA+CGG | 0.732878 | 2.3:+19720443 | MS.gene40565:CDS |
| TTGATCCCAGTATGTCACTG+TGG | 0.739707 | 2.3:-19721819 | None:intergenic |
| ATTCCAATGAGACTGCTCTG+GGG | 0.741647 | 2.3:+19720222 | MS.gene40565:CDS |
| TGTTGCCCTTACAATCATGG+AGG | 0.746862 | 2.3:+19725871 | MS.gene40565:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 19719972 | 19727997 | 19719972 | ID=MS.gene40565 |
| chr2.3 | mRNA | 19719972 | 19727997 | 19719972 | ID=MS.gene40565.t1;Parent=MS.gene40565 |
| chr2.3 | exon | 19719972 | 19722662 | 19719972 | ID=MS.gene40565.t1.exon1;Parent=MS.gene40565.t1 |
| chr2.3 | CDS | 19719972 | 19722662 | 19719972 | ID=cds.MS.gene40565.t1;Parent=MS.gene40565.t1 |
| chr2.3 | exon | 19723399 | 19723522 | 19723399 | ID=MS.gene40565.t1.exon2;Parent=MS.gene40565.t1 |
| chr2.3 | CDS | 19723399 | 19723522 | 19723399 | ID=cds.MS.gene40565.t1;Parent=MS.gene40565.t1 |
| chr2.3 | exon | 19723978 | 19724060 | 19723978 | ID=MS.gene40565.t1.exon3;Parent=MS.gene40565.t1 |
| chr2.3 | CDS | 19723978 | 19724060 | 19723978 | ID=cds.MS.gene40565.t1;Parent=MS.gene40565.t1 |
| chr2.3 | exon | 19725722 | 19725963 | 19725722 | ID=MS.gene40565.t1.exon4;Parent=MS.gene40565.t1 |
| chr2.3 | CDS | 19725722 | 19725963 | 19725722 | ID=cds.MS.gene40565.t1;Parent=MS.gene40565.t1 |
| chr2.3 | exon | 19726122 | 19726208 | 19726122 | ID=MS.gene40565.t1.exon5;Parent=MS.gene40565.t1 |
| chr2.3 | CDS | 19726122 | 19726208 | 19726122 | ID=cds.MS.gene40565.t1;Parent=MS.gene40565.t1 |
| chr2.3 | exon | 19726470 | 19726569 | 19726470 | ID=MS.gene40565.t1.exon6;Parent=MS.gene40565.t1 |
| chr2.3 | CDS | 19726470 | 19726569 | 19726470 | ID=cds.MS.gene40565.t1;Parent=MS.gene40565.t1 |
| chr2.3 | exon | 19727009 | 19727201 | 19727009 | ID=MS.gene40565.t1.exon7;Parent=MS.gene40565.t1 |
| chr2.3 | CDS | 19727009 | 19727201 | 19727009 | ID=cds.MS.gene40565.t1;Parent=MS.gene40565.t1 |
| chr2.3 | exon | 19727459 | 19727997 | 19727459 | ID=MS.gene40565.t1.exon8;Parent=MS.gene40565.t1 |
| chr2.3 | CDS | 19727459 | 19727997 | 19727459 | ID=cds.MS.gene40565.t1;Parent=MS.gene40565.t1 |
| Gene Sequence |
| Protein sequence |
