Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene42080.t1 | XP_003623567.1 | 87.2 | 312 | 18 | 1 | 1 | 290 | 1 | 312 | 6.40E-145 | 523.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene42080.t1 | P22195 | 62.5 | 312 | 95 | 1 | 1 | 290 | 5 | 316 | 7.2e-105 | 381.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene42080.t1 | G7KX25 | 87.2 | 312 | 18 | 1 | 1 | 290 | 1 | 312 | 4.6e-145 | 523.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049137 | MS.gene42080 | -0.816247 | 6.10E-52 | -1.69E-46 |
MS.gene04932 | MS.gene42080 | 0.821099 | 4.83E-53 | -1.69E-46 |
MS.gene049549 | MS.gene42080 | 0.864693 | 1.01E-64 | -1.69E-46 |
MS.gene049634 | MS.gene42080 | 0.802922 | 4.46E-49 | -1.69E-46 |
MS.gene050095 | MS.gene42080 | 0.831411 | 1.69E-55 | -1.69E-46 |
MS.gene050096 | MS.gene42080 | 0.849788 | 2.58E-60 | -1.69E-46 |
MS.gene050529 | MS.gene42080 | -0.807116 | 5.92E-50 | -1.69E-46 |
MS.gene050647 | MS.gene42080 | 0.802009 | 6.87E-49 | -1.69E-46 |
MS.gene050670 | MS.gene42080 | -0.801227 | 9.94E-49 | -1.69E-46 |
MS.gene050720 | MS.gene42080 | 0.80956 | 1.78E-50 | -1.69E-46 |
MS.gene05104 | MS.gene42080 | 0.816398 | 5.65E-52 | -1.69E-46 |
MS.gene051131 | MS.gene42080 | 0.821438 | 4.04E-53 | -1.69E-46 |
MS.gene051158 | MS.gene42080 | 0.820873 | 5.45E-53 | -1.69E-46 |
MS.gene051632 | MS.gene42080 | 0.819106 | 1.38E-52 | -1.69E-46 |
MS.gene051666 | MS.gene42080 | -0.800839 | 1.19E-48 | -1.69E-46 |
MS.gene051996 | MS.gene42080 | 0.810113 | 1.35E-50 | -1.69E-46 |
MS.gene052211 | MS.gene42080 | 0.844554 | 7.04E-59 | -1.69E-46 |
MS.gene052223 | MS.gene42080 | 0.800751 | 1.24E-48 | -1.69E-46 |
MS.gene05240 | MS.gene42080 | 0.86175 | 8.24E-64 | -1.69E-46 |
MS.gene05244 | MS.gene42080 | 0.811754 | 5.98E-51 | -1.69E-46 |
MS.gene052501 | MS.gene42080 | -0.800026 | 1.75E-48 | -1.69E-46 |
MS.gene052505 | MS.gene42080 | -0.805296 | 1.43E-49 | -1.69E-46 |
MS.gene052606 | MS.gene42080 | 0.823768 | 1.16E-53 | -1.69E-46 |
MS.gene052702 | MS.gene42080 | 0.82361 | 1.26E-53 | -1.69E-46 |
MS.gene052706 | MS.gene42080 | 0.803238 | 3.84E-49 | -1.69E-46 |
MS.gene052805 | MS.gene42080 | 0.81482 | 1.27E-51 | -1.69E-46 |
MS.gene053030 | MS.gene42080 | 0.830034 | 3.69E-55 | -1.69E-46 |
MS.gene053031 | MS.gene42080 | 0.853788 | 1.89E-61 | -1.69E-46 |
MS.gene053033 | MS.gene42080 | 0.838651 | 2.53E-57 | -1.69E-46 |
MS.gene053403 | MS.gene42080 | 0.814121 | 1.81E-51 | -1.69E-46 |
MS.gene053406 | MS.gene42080 | 0.8804 | 5.67E-70 | -1.69E-46 |
MS.gene053420 | MS.gene42080 | 0.80087 | 1.18E-48 | -1.69E-46 |
MS.gene053887 | MS.gene42080 | 0.804182 | 2.44E-49 | -1.69E-46 |
MS.gene054146 | MS.gene42080 | 0.840833 | 6.85E-58 | -1.69E-46 |
MS.gene054181 | MS.gene42080 | 0.836288 | 1.02E-56 | -1.69E-46 |
MS.gene054277 | MS.gene42080 | 0.835842 | 1.33E-56 | -1.69E-46 |
MS.gene054290 | MS.gene42080 | 0.836167 | 1.10E-56 | -1.69E-46 |
MS.gene054421 | MS.gene42080 | 0.810312 | 1.23E-50 | -1.69E-46 |
MS.gene054742 | MS.gene42080 | 0.850144 | 2.05E-60 | -1.69E-46 |
MS.gene05483 | MS.gene42080 | 0.830075 | 3.60E-55 | -1.69E-46 |
MS.gene054884 | MS.gene42080 | 0.810527 | 1.10E-50 | -1.69E-46 |
MS.gene055154 | MS.gene42080 | 0.800134 | 1.66E-48 | -1.69E-46 |
MS.gene055240 | MS.gene42080 | 0.839036 | 2.01E-57 | -1.69E-46 |
MS.gene055533 | MS.gene42080 | -0.800618 | 1.32E-48 | -1.69E-46 |
MS.gene055601 | MS.gene42080 | 0.833647 | 4.73E-56 | -1.69E-46 |
MS.gene056224 | MS.gene42080 | 0.808423 | 3.12E-50 | -1.69E-46 |
MS.gene056330 | MS.gene42080 | 0.820822 | 5.60E-53 | -1.69E-46 |
MS.gene056590 | MS.gene42080 | 0.826805 | 2.22E-54 | -1.69E-46 |
MS.gene056591 | MS.gene42080 | 0.826588 | 2.50E-54 | -1.69E-46 |
MS.gene056691 | MS.gene42080 | 0.802176 | 6.35E-49 | -1.69E-46 |
MS.gene056697 | MS.gene42080 | 0.805179 | 1.51E-49 | -1.69E-46 |
MS.gene056748 | MS.gene42080 | 0.816067 | 6.69E-52 | -1.69E-46 |
MS.gene056856 | MS.gene42080 | 0.81423 | 1.71E-51 | -1.69E-46 |
MS.gene056899 | MS.gene42080 | 0.820687 | 6.01E-53 | -1.69E-46 |
MS.gene056920 | MS.gene42080 | 0.838619 | 2.58E-57 | -1.69E-46 |
MS.gene056922 | MS.gene42080 | 0.821171 | 4.65E-53 | -1.69E-46 |
MS.gene056923 | MS.gene42080 | 0.802024 | 6.83E-49 | -1.69E-46 |
MS.gene057146 | MS.gene42080 | -0.81965 | 1.04E-52 | -1.69E-46 |
MS.gene057261 | MS.gene42080 | 0.837831 | 4.12E-57 | -1.69E-46 |
MS.gene057544 | MS.gene42080 | 0.842634 | 2.29E-58 | -1.69E-46 |
MS.gene057547 | MS.gene42080 | 0.810012 | 1.42E-50 | -1.69E-46 |
MS.gene058177 | MS.gene42080 | 0.827097 | 1.89E-54 | -1.69E-46 |
MS.gene058218 | MS.gene42080 | 0.829123 | 6.14E-55 | -1.69E-46 |
MS.gene058603 | MS.gene42080 | 0.837579 | 4.78E-57 | -1.69E-46 |
MS.gene058928 | MS.gene42080 | -0.811894 | 5.57E-51 | -1.69E-46 |
MS.gene059043 | MS.gene42080 | 0.815751 | 7.87E-52 | -1.69E-46 |
MS.gene059402 | MS.gene42080 | 0.843239 | 1.58E-58 | -1.69E-46 |
MS.gene059944 | MS.gene42080 | 0.804698 | 1.91E-49 | -1.69E-46 |
MS.gene059953 | MS.gene42080 | 0.842724 | 2.17E-58 | -1.69E-46 |
MS.gene059955 | MS.gene42080 | 0.864847 | 9.05E-65 | -1.69E-46 |
MS.gene060087 | MS.gene42080 | 0.834413 | 3.04E-56 | -1.69E-46 |
MS.gene060593 | MS.gene42080 | 0.805632 | 1.22E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene42080.t1 | MTR_7g072510 | 87.179 | 312 | 18 | 1 | 1 | 290 | 1 | 312 | 0.0 | 540 |
MS.gene42080.t1 | MTR_7g072480 | 66.026 | 312 | 84 | 1 | 1 | 290 | 5 | 316 | 4.56e-151 | 425 |
MS.gene42080.t1 | MTR_3g466180 | 60.656 | 305 | 98 | 1 | 8 | 290 | 19 | 323 | 2.12e-117 | 340 |
MS.gene42080.t1 | MTR_5g083860 | 54.723 | 307 | 115 | 2 | 8 | 290 | 19 | 325 | 2.94e-117 | 340 |
MS.gene42080.t1 | MTR_3g094650 | 55.263 | 304 | 112 | 2 | 8 | 287 | 16 | 319 | 8.65e-117 | 338 |
MS.gene42080.t1 | MTR_4g029190 | 52.134 | 328 | 112 | 4 | 8 | 290 | 13 | 340 | 1.99e-115 | 336 |
MS.gene42080.t1 | MTR_4g029200 | 50.606 | 330 | 120 | 2 | 4 | 290 | 9 | 338 | 4.36e-115 | 335 |
MS.gene42080.t1 | MTR_2g084080 | 52.751 | 309 | 124 | 1 | 4 | 290 | 9 | 317 | 7.83e-115 | 333 |
MS.gene42080.t1 | MTR_2g084110 | 54.730 | 296 | 112 | 1 | 17 | 290 | 22 | 317 | 2.33e-114 | 332 |
MS.gene42080.t1 | MTR_2g084010 | 52.903 | 310 | 123 | 2 | 4 | 290 | 9 | 318 | 1.67e-113 | 330 |
MS.gene42080.t1 | MTR_1g115900 | 54.369 | 309 | 114 | 5 | 8 | 290 | 14 | 321 | 2.07e-113 | 330 |
MS.gene42080.t1 | MTR_2g084020 | 54.730 | 296 | 111 | 2 | 18 | 290 | 23 | 318 | 2.75e-113 | 330 |
MS.gene42080.t1 | MTR_3g466200 | 52.885 | 312 | 122 | 4 | 4 | 290 | 9 | 320 | 1.60e-111 | 325 |
MS.gene42080.t1 | MTR_3g094670 | 53.822 | 314 | 121 | 2 | 1 | 290 | 9 | 322 | 8.32e-111 | 323 |
MS.gene42080.t1 | MTR_3g072190 | 54.422 | 294 | 112 | 1 | 19 | 290 | 25 | 318 | 8.39e-110 | 321 |
MS.gene42080.t1 | MTR_3g094630 | 54.459 | 314 | 117 | 3 | 1 | 290 | 11 | 322 | 1.14e-108 | 318 |
MS.gene42080.t1 | MTR_5g074970 | 54.515 | 299 | 110 | 3 | 18 | 290 | 28 | 326 | 9.69e-108 | 316 |
MS.gene42080.t1 | MTR_2g084000 | 49.838 | 309 | 130 | 3 | 5 | 290 | 13 | 319 | 1.01e-107 | 315 |
MS.gene42080.t1 | MTR_7g026990 | 54.237 | 295 | 111 | 3 | 19 | 290 | 29 | 322 | 7.04e-107 | 313 |
MS.gene42080.t1 | MTR_3g072190 | 61.134 | 247 | 96 | 0 | 44 | 290 | 5 | 251 | 5.03e-106 | 308 |
MS.gene42080.t1 | MTR_2g084090 | 52.027 | 296 | 119 | 2 | 18 | 290 | 23 | 318 | 2.51e-104 | 307 |
MS.gene42080.t1 | MTR_4g029170 | 52.203 | 295 | 117 | 3 | 20 | 290 | 27 | 321 | 4.05e-103 | 304 |
MS.gene42080.t1 | MTR_4g083710 | 50.314 | 318 | 128 | 5 | 3 | 290 | 7 | 324 | 7.28e-102 | 301 |
MS.gene42080.t1 | MTR_4g029180 | 50.000 | 292 | 122 | 3 | 23 | 290 | 30 | 321 | 1.63e-97 | 290 |
MS.gene42080.t1 | MTR_4g074995 | 49.521 | 313 | 117 | 6 | 5 | 290 | 10 | 308 | 5.79e-95 | 283 |
MS.gene42080.t1 | MTR_5g074760 | 47.785 | 316 | 134 | 6 | 5 | 290 | 7 | 321 | 1.73e-94 | 282 |
MS.gene42080.t1 | MTR_5g074740 | 47.785 | 316 | 134 | 6 | 5 | 290 | 7 | 321 | 8.02e-94 | 280 |
MS.gene42080.t1 | MTR_3g467600 | 50.166 | 301 | 123 | 5 | 17 | 290 | 24 | 324 | 1.06e-93 | 280 |
MS.gene42080.t1 | MTR_4g074990 | 49.338 | 302 | 112 | 4 | 15 | 290 | 19 | 305 | 1.55e-93 | 279 |
MS.gene42080.t1 | MTR_5g074710 | 47.152 | 316 | 136 | 6 | 5 | 290 | 7 | 321 | 1.70e-93 | 280 |
MS.gene42080.t1 | MTR_5g074860 | 47.950 | 317 | 129 | 6 | 8 | 289 | 9 | 324 | 9.17e-93 | 278 |
MS.gene42080.t1 | MTR_4g122640 | 48.161 | 299 | 127 | 3 | 20 | 290 | 38 | 336 | 1.86e-88 | 267 |
MS.gene42080.t1 | MTR_8g076820 | 44.904 | 314 | 142 | 4 | 7 | 290 | 18 | 330 | 5.92e-88 | 266 |
MS.gene42080.t1 | MTR_2g029750 | 43.385 | 325 | 145 | 4 | 5 | 290 | 6 | 330 | 1.07e-85 | 261 |
MS.gene42080.t1 | MTR_5g021060 | 44.850 | 301 | 136 | 3 | 20 | 290 | 30 | 330 | 1.18e-85 | 259 |
MS.gene42080.t1 | MTR_2g040000 | 45.631 | 309 | 132 | 4 | 16 | 290 | 25 | 331 | 2.93e-85 | 259 |
MS.gene42080.t1 | MTR_1g022970 | 44.118 | 306 | 140 | 4 | 16 | 290 | 42 | 347 | 3.74e-85 | 259 |
MS.gene42080.t1 | MTR_4g074980 | 46.753 | 308 | 115 | 7 | 8 | 290 | 11 | 294 | 9.59e-85 | 256 |
MS.gene42080.t1 | MTR_5g014100 | 44.337 | 309 | 137 | 3 | 17 | 290 | 23 | 331 | 2.41e-84 | 256 |
MS.gene42080.t1 | MTR_2g029860 | 44.795 | 317 | 141 | 5 | 8 | 290 | 14 | 330 | 2.41e-84 | 257 |
MS.gene42080.t1 | MTR_4g125940 | 45.016 | 311 | 130 | 5 | 16 | 290 | 24 | 329 | 9.08e-84 | 255 |
MS.gene42080.t1 | MTR_2g029815 | 41.975 | 324 | 149 | 5 | 6 | 290 | 7 | 330 | 4.36e-82 | 251 |
MS.gene42080.t1 | MTR_7g093370 | 41.379 | 319 | 155 | 4 | 4 | 290 | 53 | 371 | 4.96e-82 | 252 |
MS.gene42080.t1 | MTR_2g029800 | 42.812 | 320 | 144 | 4 | 10 | 290 | 11 | 330 | 4.96e-82 | 251 |
MS.gene42080.t1 | MTR_5g049280 | 41.830 | 306 | 144 | 5 | 19 | 290 | 32 | 337 | 1.57e-81 | 249 |
MS.gene42080.t1 | MTR_2g029560 | 44.408 | 304 | 138 | 3 | 18 | 290 | 22 | 325 | 3.06e-81 | 249 |
MS.gene42080.t1 | MTR_2g029830 | 45.066 | 304 | 136 | 5 | 18 | 290 | 26 | 329 | 3.51e-81 | 249 |
MS.gene42080.t1 | MTR_2g029850 | 42.812 | 320 | 144 | 4 | 10 | 290 | 11 | 330 | 1.08e-80 | 248 |
MS.gene42080.t1 | MTR_5g017860 | 44.237 | 321 | 145 | 5 | 3 | 290 | 7 | 326 | 1.08e-80 | 247 |
MS.gene42080.t1 | MTR_2g028980 | 42.331 | 326 | 147 | 5 | 5 | 290 | 6 | 330 | 2.52e-80 | 247 |
MS.gene42080.t1 | MTR_1g054205 | 41.745 | 321 | 153 | 5 | 2 | 290 | 8 | 326 | 2.66e-80 | 246 |
MS.gene42080.t1 | MTR_2g029730 | 44.079 | 304 | 139 | 3 | 18 | 290 | 23 | 326 | 1.25e-79 | 245 |
MS.gene42080.t1 | MTR_4g074980 | 52.263 | 243 | 88 | 4 | 8 | 222 | 11 | 253 | 1.69e-79 | 241 |
MS.gene42080.t1 | MTR_5g017850 | 43.925 | 321 | 146 | 5 | 3 | 290 | 7 | 326 | 2.03e-79 | 244 |
MS.gene42080.t1 | MTR_2g029740 | 41.104 | 326 | 154 | 5 | 3 | 290 | 5 | 330 | 7.17e-79 | 243 |
MS.gene42080.t1 | MTR_2g029830 | 47.656 | 256 | 125 | 2 | 44 | 290 | 6 | 261 | 3.16e-78 | 239 |
MS.gene42080.t1 | MTR_2g029820 | 41.049 | 324 | 152 | 4 | 6 | 290 | 7 | 330 | 4.87e-78 | 241 |
MS.gene42080.t1 | MTR_4g125940 | 49.425 | 261 | 113 | 4 | 44 | 290 | 19 | 274 | 8.70e-78 | 238 |
MS.gene42080.t1 | MTR_2g029910 | 42.056 | 321 | 146 | 5 | 10 | 290 | 12 | 332 | 3.76e-76 | 236 |
MS.gene42080.t1 | MTR_7g072490 | 55.263 | 228 | 48 | 2 | 44 | 271 | 2 | 175 | 5.57e-76 | 231 |
MS.gene42080.t1 | MTR_0155s0040 | 40.461 | 304 | 152 | 7 | 11 | 290 | 17 | 315 | 1.07e-70 | 221 |
MS.gene42080.t1 | MTR_3g092990 | 40.523 | 306 | 163 | 3 | 4 | 290 | 10 | 315 | 7.10e-70 | 219 |
MS.gene42080.t1 | MTR_5g074700 | 51.121 | 223 | 93 | 5 | 71 | 290 | 5 | 214 | 1.62e-69 | 214 |
MS.gene42080.t1 | MTR_4g031140 | 40.984 | 305 | 148 | 4 | 15 | 290 | 23 | 324 | 5.94e-69 | 217 |
MS.gene42080.t1 | MTR_4g030890 | 42.244 | 303 | 143 | 5 | 17 | 290 | 97 | 396 | 2.79e-68 | 218 |
MS.gene42080.t1 | MTR_3g092990 | 39.117 | 317 | 163 | 3 | 4 | 290 | 10 | 326 | 4.22e-68 | 214 |
MS.gene42080.t1 | MTR_5g074860 | 40.063 | 317 | 115 | 7 | 8 | 289 | 9 | 285 | 1.71e-66 | 209 |
MS.gene42080.t1 | MTR_4g046713 | 37.421 | 318 | 168 | 5 | 3 | 290 | 10 | 326 | 3.55e-66 | 210 |
MS.gene42080.t1 | MTR_1g077000 | 39.550 | 311 | 159 | 7 | 4 | 290 | 22 | 327 | 1.94e-64 | 205 |
MS.gene42080.t1 | MTR_2g008710 | 41.196 | 301 | 137 | 7 | 24 | 290 | 31 | 325 | 2.22e-64 | 205 |
MS.gene42080.t1 | MTR_2g088770 | 38.413 | 315 | 160 | 8 | 8 | 290 | 13 | 325 | 1.03e-63 | 203 |
MS.gene42080.t1 | MTR_2g008730 | 41.060 | 302 | 153 | 7 | 6 | 290 | 8 | 301 | 3.72e-63 | 201 |
MS.gene42080.t1 | MTR_1g086320 | 37.987 | 308 | 156 | 5 | 17 | 290 | 27 | 333 | 9.55e-63 | 201 |
MS.gene42080.t1 | MTR_1g101830 | 38.170 | 317 | 159 | 7 | 5 | 290 | 12 | 322 | 1.45e-62 | 200 |
MS.gene42080.t1 | MTR_1g038680 | 39.333 | 300 | 149 | 5 | 24 | 290 | 33 | 332 | 3.61e-62 | 199 |
MS.gene42080.t1 | MTR_7g107520 | 38.019 | 313 | 160 | 7 | 8 | 290 | 12 | 320 | 1.24e-61 | 198 |
MS.gene42080.t1 | MTR_1g086490 | 37.580 | 314 | 156 | 4 | 17 | 290 | 27 | 340 | 1.87e-61 | 198 |
MS.gene42080.t1 | MTR_8g075100 | 37.667 | 300 | 152 | 5 | 20 | 290 | 26 | 319 | 2.84e-61 | 197 |
MS.gene42080.t1 | MTR_7g029030 | 37.793 | 299 | 157 | 5 | 19 | 290 | 24 | 320 | 9.34e-61 | 196 |
MS.gene42080.t1 | MTR_3g072210 | 52.973 | 185 | 85 | 2 | 108 | 290 | 54 | 238 | 5.25e-60 | 191 |
MS.gene42080.t1 | MTR_4g133800 | 38.667 | 300 | 146 | 8 | 21 | 290 | 42 | 333 | 1.52e-59 | 193 |
MS.gene42080.t1 | MTR_6g027440 | 38.050 | 318 | 165 | 8 | 1 | 290 | 1 | 314 | 1.54e-58 | 190 |
MS.gene42080.t1 | MTR_5g016010 | 36.275 | 306 | 161 | 5 | 17 | 289 | 24 | 328 | 1.74e-58 | 190 |
MS.gene42080.t1 | MTR_7g086820 | 36.667 | 300 | 158 | 5 | 18 | 290 | 18 | 312 | 3.64e-58 | 189 |
MS.gene42080.t1 | MTR_1g025980 | 35.759 | 316 | 167 | 7 | 4 | 289 | 8 | 317 | 5.64e-58 | 188 |
MS.gene42080.t1 | MTR_7g086870 | 35.714 | 294 | 162 | 5 | 20 | 290 | 22 | 311 | 3.07e-57 | 186 |
MS.gene42080.t1 | MTR_4g095450 | 36.422 | 313 | 169 | 6 | 6 | 289 | 12 | 323 | 3.17e-57 | 187 |
MS.gene42080.t1 | MTR_6g043460 | 37.113 | 291 | 157 | 5 | 20 | 286 | 36 | 324 | 4.58e-57 | 187 |
MS.gene42080.t1 | MTR_5g022870 | 35.577 | 312 | 166 | 5 | 8 | 290 | 11 | 316 | 6.19e-57 | 186 |
MS.gene42080.t1 | MTR_4g114210 | 35.494 | 324 | 170 | 6 | 1 | 290 | 2 | 320 | 7.37e-57 | 186 |
MS.gene42080.t1 | MTR_0286s0010 | 37.061 | 313 | 165 | 5 | 9 | 290 | 23 | 334 | 1.45e-56 | 185 |
MS.gene42080.t1 | MTR_6g008075 | 37.061 | 313 | 165 | 5 | 9 | 290 | 23 | 334 | 1.45e-56 | 185 |
MS.gene42080.t1 | MTR_4g087965 | 35.410 | 305 | 163 | 6 | 16 | 286 | 38 | 342 | 2.24e-55 | 182 |
MS.gene42080.t1 | MTR_1g090760 | 37.255 | 306 | 160 | 6 | 17 | 290 | 25 | 330 | 2.06e-54 | 180 |
MS.gene42080.t1 | MTR_2g437770 | 35.880 | 301 | 154 | 8 | 20 | 290 | 50 | 341 | 4.07e-54 | 179 |
MS.gene42080.t1 | MTR_8g062780 | 34.076 | 314 | 176 | 4 | 8 | 290 | 11 | 324 | 6.82e-54 | 178 |
MS.gene42080.t1 | MTR_6g043280 | 36.364 | 297 | 158 | 7 | 20 | 290 | 41 | 332 | 4.36e-53 | 176 |
MS.gene42080.t1 | MTR_4g127670 | 35.216 | 301 | 158 | 5 | 19 | 286 | 23 | 319 | 4.97e-53 | 176 |
MS.gene42080.t1 | MTR_1g009750 | 35.831 | 307 | 162 | 6 | 17 | 290 | 24 | 328 | 5.97e-53 | 176 |
MS.gene42080.t1 | MTR_1g066380 | 31.667 | 300 | 177 | 4 | 18 | 290 | 25 | 323 | 6.84e-53 | 176 |
MS.gene42080.t1 | MTR_1g066710 | 31.561 | 301 | 178 | 4 | 17 | 290 | 24 | 323 | 1.54e-52 | 174 |
MS.gene42080.t1 | MTR_4g132490 | 34.177 | 316 | 177 | 5 | 4 | 290 | 14 | 327 | 2.66e-52 | 174 |
MS.gene42080.t1 | MTR_2g067440 | 35.599 | 309 | 156 | 8 | 22 | 289 | 81 | 387 | 1.25e-51 | 174 |
MS.gene42080.t1 | MTR_2g099175 | 31.454 | 337 | 179 | 8 | 1 | 290 | 4 | 335 | 2.40e-51 | 172 |
MS.gene42080.t1 | MTR_2g077990 | 36.149 | 296 | 149 | 6 | 30 | 286 | 108 | 402 | 4.21e-51 | 173 |
MS.gene42080.t1 | MTR_2g008160 | 34.853 | 307 | 163 | 6 | 17 | 290 | 21 | 323 | 9.94e-51 | 170 |
MS.gene42080.t1 | MTR_1g066380 | 34.661 | 251 | 158 | 3 | 45 | 290 | 6 | 255 | 5.96e-50 | 166 |
MS.gene42080.t1 | MTR_1g066640 | 31.229 | 301 | 179 | 4 | 17 | 290 | 24 | 323 | 8.15e-50 | 167 |
MS.gene42080.t1 | MTR_2g078610 | 35.135 | 296 | 152 | 6 | 30 | 286 | 108 | 402 | 3.41e-49 | 168 |
MS.gene42080.t1 | MTR_6g043240 | 34.459 | 296 | 163 | 7 | 20 | 290 | 42 | 331 | 4.50e-48 | 164 |
MS.gene42080.t1 | MTR_2g067450 | 33.121 | 314 | 156 | 8 | 18 | 289 | 9 | 310 | 2.93e-47 | 160 |
MS.gene42080.t1 | MTR_3g105790 | 31.761 | 318 | 182 | 3 | 4 | 290 | 9 | 322 | 1.02e-46 | 159 |
MS.gene42080.t1 | MTR_5g033470 | 35.691 | 311 | 166 | 7 | 14 | 290 | 67 | 377 | 1.29e-46 | 160 |
MS.gene42080.t1 | MTR_0147s0010 | 34.754 | 305 | 158 | 8 | 20 | 286 | 77 | 378 | 2.63e-46 | 160 |
MS.gene42080.t1 | MTR_1g066680 | 29.667 | 300 | 184 | 4 | 17 | 290 | 24 | 322 | 4.94e-46 | 157 |
MS.gene42080.t1 | MTR_2g078280 | 35.315 | 286 | 145 | 6 | 30 | 276 | 108 | 392 | 7.57e-45 | 156 |
MS.gene42080.t1 | MTR_4g132110 | 29.866 | 298 | 181 | 4 | 20 | 290 | 32 | 328 | 1.02e-42 | 149 |
MS.gene42080.t1 | MTR_1g009750 | 32.787 | 305 | 157 | 7 | 17 | 290 | 24 | 311 | 2.05e-41 | 145 |
MS.gene42080.t1 | MTR_2g029880 | 41.451 | 193 | 88 | 5 | 110 | 290 | 9 | 188 | 2.55e-41 | 142 |
MS.gene42080.t1 | MTR_4g132110 | 29.373 | 303 | 181 | 5 | 20 | 290 | 32 | 333 | 1.96e-40 | 143 |
MS.gene42080.t1 | MTR_3g105790 | 35.319 | 235 | 143 | 1 | 65 | 290 | 12 | 246 | 1.12e-39 | 139 |
MS.gene42080.t1 | MTR_2g008160 | 31.561 | 301 | 146 | 6 | 17 | 290 | 21 | 288 | 1.88e-37 | 134 |
MS.gene42080.t1 | MTR_2g078560 | 31.532 | 222 | 114 | 4 | 103 | 286 | 95 | 316 | 5.34e-29 | 113 |
MS.gene42080.t1 | MTR_3g072260 | 49.091 | 110 | 34 | 1 | 19 | 106 | 25 | 134 | 1.24e-28 | 107 |
MS.gene42080.t1 | MTR_2g008160 | 37.572 | 173 | 82 | 4 | 17 | 167 | 21 | 189 | 2.16e-28 | 108 |
MS.gene42080.t1 | MTR_2g077980 | 30.072 | 276 | 147 | 9 | 60 | 290 | 11 | 285 | 2.05e-25 | 102 |
MS.gene42080.t1 | MTR_3g462850 | 39.007 | 141 | 74 | 4 | 162 | 290 | 9 | 149 | 1.10e-23 | 94.4 |
MS.gene42080.t1 | MTR_7g086790 | 40.476 | 126 | 71 | 2 | 39 | 164 | 11 | 132 | 1.01e-22 | 93.2 |
MS.gene42080.t1 | MTR_5g058120 | 35.065 | 154 | 96 | 2 | 133 | 286 | 6 | 155 | 3.76e-22 | 93.2 |
MS.gene42080.t1 | MTR_4g031040 | 36.145 | 166 | 69 | 3 | 59 | 224 | 3 | 131 | 3.61e-21 | 87.4 |
MS.gene42080.t1 | MTR_5g074770 | 42.222 | 90 | 49 | 2 | 202 | 289 | 20 | 108 | 1.77e-19 | 82.0 |
MS.gene42080.t1 | MTR_1g098320 | 46.154 | 78 | 42 | 0 | 213 | 290 | 47 | 124 | 4.02e-18 | 79.3 |
MS.gene42080.t1 | MTR_7g107500 | 41.667 | 84 | 48 | 1 | 207 | 290 | 15 | 97 | 1.03e-14 | 68.9 |
MS.gene42080.t1 | MTR_6g048160 | 61.905 | 63 | 20 | 2 | 44 | 106 | 29 | 87 | 1.72e-14 | 68.2 |
MS.gene42080.t1 | MTR_1g089005 | 54.839 | 62 | 27 | 1 | 48 | 109 | 71 | 131 | 2.92e-12 | 63.9 |
MS.gene42080.t1 | MTR_7g086785 | 41.667 | 72 | 41 | 1 | 44 | 115 | 4 | 74 | 1.24e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene42080.t1 | AT5G05340 | 55.405 | 296 | 108 | 2 | 15 | 286 | 25 | 320 | 3.84e-114 | 332 |
MS.gene42080.t1 | AT5G58400 | 52.548 | 314 | 124 | 3 | 2 | 290 | 12 | 325 | 1.02e-109 | 321 |
MS.gene42080.t1 | AT5G58390 | 48.418 | 316 | 137 | 4 | 1 | 290 | 1 | 316 | 3.66e-100 | 296 |
MS.gene42080.t1 | AT1G14550 | 45.794 | 321 | 143 | 5 | 1 | 290 | 1 | 321 | 2.04e-96 | 287 |
MS.gene42080.t1 | AT5G06720 | 44.795 | 317 | 144 | 3 | 5 | 290 | 17 | 333 | 8.37e-88 | 265 |
MS.gene42080.t1 | AT3G32980 | 46.032 | 315 | 137 | 5 | 9 | 290 | 20 | 334 | 1.80e-87 | 265 |
MS.gene42080.t1 | AT1G14540 | 44.839 | 310 | 147 | 3 | 5 | 290 | 6 | 315 | 2.09e-87 | 264 |
MS.gene42080.t1 | AT1G44970 | 45.130 | 308 | 138 | 4 | 14 | 290 | 39 | 346 | 1.09e-86 | 263 |
MS.gene42080.t1 | AT2G38390 | 44.720 | 322 | 146 | 5 | 1 | 290 | 12 | 333 | 4.03e-86 | 261 |
MS.gene42080.t1 | AT5G06730 | 44.164 | 317 | 146 | 3 | 5 | 290 | 18 | 334 | 7.93e-86 | 261 |
MS.gene42080.t1 | AT4G36430 | 42.405 | 316 | 151 | 4 | 5 | 290 | 16 | 330 | 1.32e-85 | 259 |
MS.gene42080.t1 | AT3G49110 | 45.886 | 316 | 137 | 6 | 8 | 290 | 22 | 336 | 8.07e-85 | 258 |
MS.gene42080.t1 | AT2G18150 | 44.444 | 297 | 135 | 4 | 24 | 290 | 40 | 336 | 1.13e-84 | 258 |
MS.gene42080.t1 | AT2G18140 | 45.515 | 301 | 134 | 4 | 20 | 290 | 35 | 335 | 3.42e-84 | 256 |
MS.gene42080.t1 | AT4G08780 | 44.051 | 311 | 141 | 4 | 13 | 290 | 17 | 327 | 4.56e-84 | 256 |
MS.gene42080.t1 | AT4G08770 | 45.016 | 311 | 138 | 5 | 13 | 290 | 17 | 327 | 9.43e-84 | 255 |
MS.gene42080.t1 | AT3G49120 | 43.125 | 320 | 149 | 4 | 4 | 290 | 16 | 335 | 2.93e-83 | 254 |
MS.gene42080.t1 | AT5G66390 | 42.222 | 315 | 151 | 4 | 7 | 290 | 19 | 333 | 1.88e-82 | 252 |
MS.gene42080.t1 | AT2G38380 | 46.078 | 306 | 133 | 4 | 17 | 290 | 28 | 333 | 2.59e-82 | 252 |
MS.gene42080.t1 | AT3G50990 | 41.250 | 320 | 154 | 4 | 5 | 290 | 22 | 341 | 2.94e-81 | 249 |
MS.gene42080.t1 | AT1G68850 | 41.830 | 306 | 143 | 5 | 20 | 290 | 30 | 335 | 3.80e-81 | 248 |
MS.gene42080.t1 | AT5G19890 | 44.805 | 308 | 131 | 6 | 16 | 290 | 26 | 327 | 9.21e-81 | 247 |
MS.gene42080.t1 | AT2G35380 | 44.444 | 306 | 135 | 4 | 20 | 290 | 30 | 335 | 1.02e-80 | 247 |
MS.gene42080.t1 | AT4G16270 | 52.918 | 257 | 107 | 4 | 44 | 290 | 96 | 348 | 1.74e-80 | 247 |
MS.gene42080.t1 | AT2G22420 | 41.066 | 319 | 156 | 4 | 1 | 290 | 4 | 319 | 1.45e-75 | 234 |
MS.gene42080.t1 | AT2G35380 | 48.770 | 244 | 112 | 3 | 60 | 290 | 4 | 247 | 5.69e-74 | 227 |
MS.gene42080.t1 | AT5G19880 | 43.034 | 323 | 145 | 8 | 4 | 290 | 10 | 329 | 4.99e-72 | 225 |
MS.gene42080.t1 | AT1G49570 | 41.254 | 303 | 146 | 4 | 16 | 286 | 44 | 346 | 2.88e-70 | 221 |
MS.gene42080.t1 | AT3G03670 | 40.317 | 315 | 158 | 3 | 5 | 290 | 8 | 321 | 5.66e-69 | 217 |
MS.gene42080.t1 | AT5G17820 | 38.750 | 320 | 154 | 8 | 2 | 290 | 5 | 313 | 2.41e-65 | 207 |
MS.gene42080.t1 | AT5G15180 | 36.449 | 321 | 167 | 7 | 4 | 290 | 12 | 329 | 5.82e-65 | 207 |
MS.gene42080.t1 | AT3G01190 | 40.256 | 313 | 152 | 7 | 8 | 290 | 14 | 321 | 7.45e-65 | 206 |
MS.gene42080.t1 | AT4G33420 | 38.854 | 314 | 159 | 7 | 5 | 290 | 17 | 325 | 1.40e-64 | 206 |
MS.gene42080.t1 | AT5G40150 | 40.667 | 300 | 150 | 5 | 18 | 290 | 30 | 328 | 1.61e-64 | 206 |
MS.gene42080.t1 | AT5G17820 | 38.750 | 320 | 154 | 8 | 2 | 290 | 58 | 366 | 2.26e-64 | 206 |
MS.gene42080.t1 | AT4G33420 | 38.854 | 314 | 159 | 7 | 5 | 290 | 64 | 372 | 5.77e-64 | 206 |
MS.gene42080.t1 | AT5G14130 | 36.335 | 322 | 165 | 6 | 7 | 290 | 11 | 330 | 2.15e-63 | 202 |
MS.gene42080.t1 | AT5G14130 | 36.335 | 322 | 165 | 6 | 7 | 290 | 52 | 371 | 4.02e-63 | 203 |
MS.gene42080.t1 | AT3G28200 | 40.803 | 299 | 150 | 5 | 18 | 290 | 19 | 316 | 1.32e-62 | 200 |
MS.gene42080.t1 | AT5G64120 | 38.644 | 295 | 148 | 5 | 24 | 290 | 39 | 328 | 5.92e-62 | 199 |
MS.gene42080.t1 | AT4G11290 | 37.267 | 322 | 169 | 7 | 1 | 290 | 6 | 326 | 1.68e-61 | 198 |
MS.gene42080.t1 | AT1G05260 | 37.061 | 313 | 164 | 6 | 9 | 290 | 15 | 325 | 2.02e-61 | 197 |
MS.gene42080.t1 | AT5G67400 | 37.778 | 315 | 162 | 5 | 9 | 290 | 16 | 329 | 2.27e-61 | 197 |
MS.gene42080.t1 | AT5G51890 | 37.383 | 321 | 162 | 8 | 4 | 290 | 7 | 322 | 9.59e-61 | 196 |
MS.gene42080.t1 | AT5G39580 | 38.924 | 316 | 159 | 6 | 4 | 290 | 9 | 319 | 1.26e-60 | 195 |
MS.gene42080.t1 | AT3G49960 | 37.538 | 325 | 164 | 6 | 4 | 290 | 6 | 329 | 1.27e-60 | 196 |
MS.gene42080.t1 | AT1G71695 | 38.926 | 298 | 153 | 6 | 20 | 290 | 44 | 339 | 2.08e-60 | 196 |
MS.gene42080.t1 | AT3G21770 | 37.748 | 302 | 155 | 6 | 18 | 288 | 27 | 326 | 2.45e-59 | 192 |
MS.gene42080.t1 | AT4G33870 | 35.759 | 316 | 157 | 5 | 16 | 286 | 83 | 397 | 5.67e-59 | 194 |
MS.gene42080.t1 | AT1G34510 | 36.928 | 306 | 163 | 7 | 9 | 290 | 10 | 309 | 1.42e-58 | 190 |
MS.gene42080.t1 | AT4G37530 | 36.129 | 310 | 166 | 4 | 13 | 290 | 20 | 329 | 1.56e-58 | 190 |
MS.gene42080.t1 | AT2G18980 | 36.562 | 320 | 165 | 6 | 4 | 290 | 9 | 323 | 1.71e-58 | 190 |
MS.gene42080.t1 | AT4G26010 | 36.808 | 307 | 164 | 8 | 8 | 290 | 9 | 309 | 4.07e-57 | 186 |
MS.gene42080.t1 | AT4G26010 | 36.808 | 307 | 164 | 8 | 8 | 290 | 37 | 337 | 7.64e-57 | 186 |
MS.gene42080.t1 | AT5G47000 | 36.190 | 315 | 168 | 6 | 4 | 290 | 21 | 330 | 9.37e-57 | 186 |
MS.gene42080.t1 | AT2G41480 | 36.335 | 322 | 165 | 8 | 4 | 290 | 12 | 328 | 1.47e-56 | 185 |
MS.gene42080.t1 | AT1G05240 | 39.921 | 253 | 139 | 5 | 44 | 286 | 72 | 321 | 5.55e-56 | 184 |
MS.gene42080.t1 | AT1G05250 | 39.921 | 253 | 139 | 5 | 44 | 286 | 72 | 321 | 5.55e-56 | 184 |
MS.gene42080.t1 | AT5G42180 | 36.538 | 312 | 163 | 7 | 8 | 289 | 10 | 316 | 1.62e-55 | 182 |
MS.gene42080.t1 | AT4G17690 | 37.248 | 298 | 159 | 5 | 20 | 290 | 26 | 322 | 2.04e-55 | 182 |
MS.gene42080.t1 | AT4G30170 | 36.246 | 309 | 157 | 7 | 16 | 290 | 23 | 325 | 2.21e-55 | 182 |
MS.gene42080.t1 | AT1G24110 | 36.304 | 303 | 161 | 6 | 15 | 286 | 17 | 318 | 2.70e-55 | 182 |
MS.gene42080.t1 | AT4G37520 | 35.410 | 305 | 165 | 4 | 18 | 290 | 25 | 329 | 7.12e-55 | 181 |
MS.gene42080.t1 | AT2G34060 | 36.928 | 306 | 157 | 8 | 19 | 289 | 41 | 345 | 3.49e-54 | 179 |
MS.gene42080.t1 | AT4G37520 | 35.082 | 305 | 163 | 5 | 18 | 290 | 25 | 326 | 4.79e-53 | 176 |
MS.gene42080.t1 | AT5G64110 | 41.176 | 272 | 142 | 6 | 30 | 290 | 66 | 330 | 5.49e-53 | 176 |
MS.gene42080.t1 | AT1G77100 | 34.985 | 323 | 173 | 10 | 1 | 290 | 1 | 319 | 4.08e-52 | 173 |
MS.gene42080.t1 | AT1G30870 | 36.120 | 299 | 151 | 8 | 20 | 286 | 51 | 341 | 8.26e-51 | 171 |
MS.gene42080.t1 | AT4G25980 | 31.056 | 322 | 184 | 6 | 3 | 290 | 9 | 326 | 1.09e-50 | 170 |
MS.gene42080.t1 | AT4G31760 | 35.161 | 310 | 156 | 7 | 17 | 290 | 26 | 326 | 5.41e-50 | 168 |
MS.gene42080.t1 | AT5G64100 | 38.745 | 271 | 148 | 6 | 30 | 290 | 69 | 331 | 2.51e-49 | 166 |
MS.gene42080.t1 | AT5G24070 | 36.525 | 282 | 158 | 7 | 24 | 290 | 60 | 335 | 6.56e-49 | 166 |
MS.gene42080.t1 | AT4G37530 | 37.066 | 259 | 131 | 4 | 13 | 239 | 20 | 278 | 2.56e-48 | 162 |
MS.gene42080.t1 | AT2G43480 | 35.816 | 282 | 160 | 7 | 24 | 290 | 60 | 335 | 2.78e-48 | 164 |
MS.gene42080.t1 | AT2G24800 | 34.713 | 314 | 151 | 8 | 18 | 290 | 29 | 329 | 1.36e-47 | 162 |
MS.gene42080.t1 | AT2G37130 | 30.667 | 300 | 179 | 5 | 19 | 290 | 29 | 327 | 1.57e-47 | 162 |
MS.gene42080.t1 | AT2G39040 | 34.824 | 313 | 166 | 9 | 14 | 290 | 40 | 350 | 8.45e-47 | 160 |
MS.gene42080.t1 | AT2G37130 | 30.743 | 296 | 176 | 5 | 23 | 290 | 2 | 296 | 8.53e-47 | 159 |
MS.gene42080.t1 | AT4G21960 | 31.879 | 298 | 175 | 5 | 20 | 290 | 31 | 327 | 1.51e-45 | 157 |
MS.gene42080.t1 | AT5G22410 | 33.987 | 306 | 155 | 11 | 19 | 287 | 27 | 322 | 7.55e-44 | 152 |
MS.gene42080.t1 | AT3G17070 | 31.438 | 299 | 172 | 5 | 20 | 286 | 38 | 335 | 8.99e-41 | 144 |
MS.gene42080.t1 | AT3G17070 | 33.992 | 253 | 156 | 4 | 44 | 286 | 21 | 272 | 2.24e-39 | 139 |
MS.gene42080.t1 | AT5G39580 | 35.023 | 217 | 110 | 5 | 4 | 198 | 9 | 216 | 2.05e-27 | 107 |
MS.gene42080.t1 | AT4G25980 | 31.351 | 185 | 101 | 4 | 3 | 165 | 54 | 234 | 2.69e-25 | 102 |
MS.gene42080.t1 | AT2G24800 | 32.051 | 234 | 111 | 7 | 18 | 224 | 29 | 241 | 5.35e-23 | 95.1 |
MS.gene42080.t1 | AT3G42570 | 40.000 | 95 | 56 | 1 | 70 | 163 | 53 | 147 | 3.31e-16 | 74.7 |
MS.gene42080.t1 | AT4G32320 | 27.148 | 291 | 140 | 8 | 8 | 271 | 76 | 321 | 1.39e-14 | 73.2 |
Find 62 sgRNAs with CRISPR-Local
Find 123 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCCTCTAGTGCAGTCTTTA+TGG | 0.118664 | 7.2:+31901933 | None:intergenic |
TGCTAATGCAATGGTCAAAA+TGG | 0.164196 | 7.2:-31900825 | MS.gene42080:CDS |
CCAACAAAGCATAAGATTAT+TGG | 0.222126 | 7.2:+31903274 | None:intergenic |
TGATAAAGCAACCATTTCTT+TGG | 0.230750 | 7.2:+31901473 | None:intergenic |
AAAGAAATGGTTGCTTTATC+AGG | 0.238869 | 7.2:-31901471 | MS.gene42080:intron |
TAGACCCAGTAATTGGATTA+AGG | 0.269312 | 7.2:+31900798 | None:intergenic |
TGACCATTAGACCCAGTAAT+TGG | 0.270051 | 7.2:+31900791 | None:intergenic |
CCAATAATCTTATGCTTTGT+TGG | 0.288120 | 7.2:-31903274 | MS.gene42080:CDS |
CACAGGTGGTGATGACAATT+TGG | 0.308173 | 7.2:-31901014 | MS.gene42080:CDS |
CAATAATCTTATGCTTTGTT+GGG | 0.317431 | 7.2:-31903273 | MS.gene42080:CDS |
CCCCTTAAGGAATTAGCATT+TGG | 0.323613 | 7.2:+31901973 | None:intergenic |
GGGAACCTTAATCCAATTAC+TGG | 0.327940 | 7.2:-31900803 | MS.gene42080:CDS |
TCAGCGCATGAGACAGTTCT+AGG | 0.328783 | 7.2:+31901904 | None:intergenic |
GTTGTAGATTCTTCAGAAAC+AGG | 0.342220 | 7.2:-31901099 | MS.gene42080:CDS |
TAAGAATTGTCAAATGTGTT+TGG | 0.372329 | 7.2:+31900971 | None:intergenic |
GCTAATGCAATGGTCAAAAT+GGG | 0.387898 | 7.2:-31900824 | MS.gene42080:CDS |
GATAAAGCAACCATTTCTTT+GGG | 0.396969 | 7.2:+31901474 | None:intergenic |
TCCAAATGCTAATTCCTTAA+GGG | 0.398970 | 7.2:-31901974 | MS.gene42080:CDS |
ACCTAGTTGGACAGTGCAAT+TGG | 0.399408 | 7.2:-31901607 | MS.gene42080:CDS |
GTCCAAATGCTAATTCCTTA+AGG | 0.399689 | 7.2:-31901975 | MS.gene42080:CDS |
CAGAAGAAAAGAGACCCTTT+TGG | 0.403351 | 7.2:+31900930 | None:intergenic |
AATTACATCAAAACCCCTTA+AGG | 0.410114 | 7.2:+31901960 | None:intergenic |
GAATATAGTAGTGACTCTTC+AGG | 0.410973 | 7.2:-31900863 | MS.gene42080:CDS |
TTAATAGTTGTAAGAACATC+AGG | 0.418546 | 7.2:+31903205 | None:intergenic |
AATCCAATTACTGGGTCTAA+TGG | 0.428661 | 7.2:-31900794 | MS.gene42080:CDS |
CCAGAACTTGCAAAGCCAAA+AGG | 0.428687 | 7.2:-31900945 | MS.gene42080:CDS |
AGGTTTCACACCCAAAGAAA+TGG | 0.428767 | 7.2:-31901484 | MS.gene42080:CDS |
CTGGGTCTAATGGTCAGATT+AGG | 0.477040 | 7.2:-31900784 | MS.gene42080:CDS |
GTCAGATTAGGACCAACTGC+AGG | 0.488668 | 7.2:-31900772 | MS.gene42080:CDS |
TTCAGCTAGGTGGACCTAGT+TGG | 0.491072 | 7.2:-31901620 | MS.gene42080:intron |
TATCCTCTCTGTTGCGGCAA+GGG | 0.495055 | 7.2:-31901881 | MS.gene42080:CDS |
AACACAGATTTACCTGGTCC+TGG | 0.495820 | 7.2:-31901546 | MS.gene42080:CDS |
GGTCCTGGTTCAAATCTAGA+TGG | 0.497489 | 7.2:-31901531 | MS.gene42080:CDS |
CAGAACTTGCAAAGCCAAAA+GGG | 0.501952 | 7.2:-31900944 | MS.gene42080:CDS |
CCAAATGCTAATTCCTTAAG+GGG | 0.502672 | 7.2:-31901973 | MS.gene42080:CDS |
CCTAGTTGGACAGTGCAATT+GGG | 0.503746 | 7.2:-31901606 | MS.gene42080:CDS |
GACGATACAACAAGTTTCAC+AGG | 0.508359 | 7.2:-31902012 | MS.gene42080:CDS |
CCCAATTGCACTGTCCAACT+AGG | 0.517479 | 7.2:+31901606 | None:intergenic |
GTCAAATGTGTTTGGAGTGG+TGG | 0.520829 | 7.2:+31900979 | None:intergenic |
GGACAGTGCAATTGGGCAGA+AGG | 0.526639 | 7.2:-31901599 | MS.gene42080:CDS |
ATATCCTCTCTGTTGCGGCA+AGG | 0.537143 | 7.2:-31901882 | MS.gene42080:CDS |
TCTAGATTTGAACCAGGACC+AGG | 0.557996 | 7.2:+31901534 | None:intergenic |
CGCTGATATCCTCTCTGTTG+CGG | 0.560284 | 7.2:-31901887 | MS.gene42080:CDS |
TCAATTGATTACCCTGCAGT+TGG | 0.561042 | 7.2:+31900760 | None:intergenic |
CACCATAAAGACTGCACTAG+AGG | 0.566881 | 7.2:-31901935 | MS.gene42080:CDS |
AATAATCTTATGCTTTGTTG+GGG | 0.576567 | 7.2:-31903272 | MS.gene42080:CDS |
GACAGTGCAATTGGGCAGAA+GGG | 0.583814 | 7.2:-31901598 | MS.gene42080:CDS |
TTCATCAACATCATCGTCAG+TGG | 0.594027 | 7.2:+31900883 | None:intergenic |
TAATAATAATTTCAGCTAGG+TGG | 0.600170 | 7.2:-31901630 | MS.gene42080:intron |
CAAGCAAATTGTCCTACCAC+AGG | 0.606022 | 7.2:-31901031 | MS.gene42080:CDS |
TTAGCTAACACAGATTTACC+TGG | 0.610114 | 7.2:-31901552 | MS.gene42080:CDS |
CAAATTGTCATCACCACCTG+TGG | 0.610605 | 7.2:+31901015 | None:intergenic |
CAGCGCATGAGACAGTTCTA+GGG | 0.613294 | 7.2:+31901905 | None:intergenic |
TTTGGAGTGGTGGTGTCAAG+TGG | 0.639332 | 7.2:+31900989 | None:intergenic |
GGAACCTTAATCCAATTACT+GGG | 0.644511 | 7.2:-31900802 | MS.gene42080:CDS |
TTGTCATCACCACCTGTGGT+AGG | 0.645092 | 7.2:+31901019 | None:intergenic |
GCAAATTGTCCTACCACAGG+TGG | 0.657034 | 7.2:-31901028 | MS.gene42080:CDS |
ATTGTCAAATGTGTTTGGAG+TGG | 0.663128 | 7.2:+31900976 | None:intergenic |
TCAGATTAGGACCAACTGCA+GGG | 0.665548 | 7.2:-31900771 | MS.gene42080:CDS |
CTAATGCAATGGTCAAAATG+GGG | 0.675770 | 7.2:-31900823 | MS.gene42080:CDS |
AGTCCCTTGCCGCAACAGAG+AGG | 0.682879 | 7.2:+31901878 | None:intergenic |
AGACCATCTAGATTTGAACC+AGG | 0.691335 | 7.2:+31901528 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CAAAATTATAAAAATGAATT+AGG | + | chr7.2:31901829-31901848 | None:intergenic | 10.0% |
!! | TCAAATATTCTATAAAAAAA+AGG | + | chr7.2:31901683-31901702 | None:intergenic | 10.0% |
!!! | AATAACAATTTTTTTTTGAA+AGG | + | chr7.2:31901429-31901448 | None:intergenic | 10.0% |
!!! | CATGTATTTTATAAAATTTA+TGG | + | chr7.2:31901095-31901114 | None:intergenic | 10.0% |
!!! | TCATTTTTATAATTTTGTAA+AGG | - | chr7.2:31901832-31901851 | MS.gene42080:intron | 10.0% |
!!! | TTTTTTCAAAAAAATCATTT+TGG | - | chr7.2:31901967-31901986 | MS.gene42080:CDS | 10.0% |
!! | AAATAATAATAATTTCAGCT+AGG | - | chr7.2:31902419-31902438 | MS.gene42080:intron | 15.0% |
!! | TAAACAATGATTGTAAAATT+AGG | + | chr7.2:31901580-31901599 | None:intergenic | 15.0% |
!!! | TTTTTATAGAATATTTGACT+TGG | - | chr7.2:31901685-31901704 | MS.gene42080:intron | 15.0% |
!! | ATTGCTTATTTATCTTGTAA+AGG | - | chr7.2:31901733-31901752 | MS.gene42080:intron | 20.0% |
!! | TAATTTGATCATCTTCATAA+AGG | - | chr7.2:31901167-31901186 | MS.gene42080:intron | 20.0% |
!! | TGAATTAGGAAATGTTAAAA+AGG | + | chr7.2:31901815-31901834 | None:intergenic | 20.0% |
!! | TTCAGTAAAATATTATTGAG+CGG | - | chr7.2:31901115-31901134 | MS.gene42080:CDS | 20.0% |
!!! | AATCTTGTGTTTTGAATATA+GGG | - | chr7.2:31901995-31902014 | MS.gene42080:CDS | 20.0% |
!!! | AGCAATTAATTAATTTGCAT+TGG | - | chr7.2:31902373-31902392 | MS.gene42080:intron | 20.0% |
!!! | ATATCTTCTTTTGATAACAA+AGG | - | chr7.2:31902548-31902567 | MS.gene42080:intron | 20.0% |
!!! | TAATCTTGTGTTTTGAATAT+AGG | - | chr7.2:31901994-31902013 | MS.gene42080:CDS | 20.0% |
!!! | TACATGCAAAACAATATTTT+AGG | - | chr7.2:31902907-31902926 | MS.gene42080:intron | 20.0% |
!!! | TATTATCTTTCTTTTTTGAC+AGG | + | chr7.2:31901633-31901652 | None:intergenic | 20.0% |
! | AATTAAAAAATCGTGTGTAG+AGG | + | chr7.2:31901391-31901410 | None:intergenic | 25.0% |
! | ATTAAAAAATCGTGTGTAGA+GGG | + | chr7.2:31901390-31901409 | None:intergenic | 25.0% |
! | ATTAAAAATTGAACAACTGC+AGG | - | chr7.2:31901327-31901346 | MS.gene42080:intron | 25.0% |
! | CATGCTTGAGTATATATAAT+AGG | + | chr7.2:31900999-31901018 | None:intergenic | 25.0% |
! | CTATTACTTTAGTCTATTAG+CGG | + | chr7.2:31901219-31901238 | None:intergenic | 25.0% |
! | TAAGAATTGTCAAATGTGTT+TGG | + | chr7.2:31903084-31903103 | None:intergenic | 25.0% |
! | TAATAATAATTTCAGCTAGG+TGG | - | chr7.2:31902422-31902441 | MS.gene42080:intron | 25.0% |
! | TGAAGATGATCAAATTACAT+CGG | + | chr7.2:31901164-31901183 | None:intergenic | 25.0% |
! | TTAATAGTTGTAAGAACATC+AGG | + | chr7.2:31900850-31900869 | None:intergenic | 25.0% |
! | TTATTTATCTTGTAAAGGCA+TGG | - | chr7.2:31901738-31901757 | MS.gene42080:intron | 25.0% |
!! | AATAATCTTATGCTTTGTTG+GGG | - | chr7.2:31900780-31900799 | MS.gene42080:CDS | 25.0% |
!! | CAATAATCTTATGCTTTGTT+GGG | - | chr7.2:31900779-31900798 | MS.gene42080:CDS | 25.0% |
!! | TTTATAATTTTGTAAAGGCG+TGG | - | chr7.2:31901837-31901856 | MS.gene42080:intron | 25.0% |
!!! | AATGTTCTGTTTTTAATCCA+AGG | + | chr7.2:31901901-31901920 | None:intergenic | 25.0% |
!!! | AGAGATAAATGTTGATAGTT+GGG | + | chr7.2:31901276-31901295 | None:intergenic | 25.0% |
!!! | GCGATAAGTTTTAAAAAACT+CGG | + | chr7.2:31902803-31902822 | None:intergenic | 25.0% |
!!! | GTAAAATTAGGAGCATTTTT+TGG | + | chr7.2:31901568-31901587 | None:intergenic | 25.0% |
AATTACATCAAAACCCCTTA+AGG | + | chr7.2:31902095-31902114 | None:intergenic | 30.0% | |
CCAACAAAGCATAAGATTAT+TGG | + | chr7.2:31900781-31900800 | None:intergenic | 30.0% | |
CCAATAATCTTATGCTTTGT+TGG | - | chr7.2:31900778-31900797 | MS.gene42080:CDS | 30.0% | |
CTAATTCAATAGCATCATGT+TGG | - | chr7.2:31901244-31901263 | MS.gene42080:intron | 30.0% | |
GATAAAGCAACCATTTCTTT+GGG | + | chr7.2:31902581-31902600 | None:intergenic | 30.0% | |
TACAATTTGTAACTTCACAG+TGG | - | chr7.2:31902275-31902294 | MS.gene42080:intron | 30.0% | |
TAGAAGAACATTTCTTTCCT+TGG | - | chr7.2:31901881-31901900 | MS.gene42080:CDS | 30.0% | |
TCCAAATGCTAATTCCTTAA+GGG | - | chr7.2:31902078-31902097 | MS.gene42080:intron | 30.0% | |
TGATAAAGCAACCATTTCTT+TGG | + | chr7.2:31902582-31902601 | None:intergenic | 30.0% | |
TTGCTTGAACAAAACAATCA+TGG | + | chr7.2:31900939-31900958 | None:intergenic | 30.0% | |
! | AAAGAAATGGTTGCTTTATC+AGG | - | chr7.2:31902581-31902600 | MS.gene42080:intron | 30.0% |
!! | AACTGATTTTGCTAATGCAA+TGG | - | chr7.2:31903218-31903237 | MS.gene42080:CDS | 30.0% |
!! | GAGAGATAAATGTTGATAGT+TGG | + | chr7.2:31901277-31901296 | None:intergenic | 30.0% |
!!! | ATTTTAGGATCTCACACAAT+TGG | - | chr7.2:31902922-31902941 | MS.gene42080:intron | 30.0% |
AATCCAATTACTGGGTCTAA+TGG | - | chr7.2:31903258-31903277 | MS.gene42080:CDS | 35.0% | |
AGAGAAATAGATTCTGCTGT+GGG | - | chr7.2:31900871-31900890 | MS.gene42080:CDS | 35.0% | |
ATTGTCAAATGTGTTTGGAG+TGG | + | chr7.2:31903079-31903098 | None:intergenic | 35.0% | |
CCAAATGCTAATTCCTTAAG+GGG | - | chr7.2:31902079-31902098 | MS.gene42080:intron | 35.0% | |
CGTTGTTGAGTAAAAATCAG+TGG | + | chr7.2:31900824-31900843 | None:intergenic | 35.0% | |
CTAATGCAATGGTCAAAATG+GGG | - | chr7.2:31903229-31903248 | MS.gene42080:CDS | 35.0% | |
GAATATAGTAGTGACTCTTC+AGG | - | chr7.2:31903189-31903208 | MS.gene42080:CDS | 35.0% | |
GAGATGAGACTGAAAAGTTA+AGG | + | chr7.2:31902825-31902844 | None:intergenic | 35.0% | |
GCTAATGCAATGGTCAAAAT+GGG | - | chr7.2:31903228-31903247 | MS.gene42080:CDS | 35.0% | |
GGAACCTTAATCCAATTACT+GGG | - | chr7.2:31903250-31903269 | MS.gene42080:CDS | 35.0% | |
GTCCAAATGCTAATTCCTTA+AGG | - | chr7.2:31902077-31902096 | MS.gene42080:intron | 35.0% | |
GTTGTAGATTCTTCAGAAAC+AGG | - | chr7.2:31902953-31902972 | MS.gene42080:intron | 35.0% | |
TAGACCCAGTAATTGGATTA+AGG | + | chr7.2:31903257-31903276 | None:intergenic | 35.0% | |
TGCTAATGCAATGGTCAAAA+TGG | - | chr7.2:31903227-31903246 | MS.gene42080:CDS | 35.0% | |
TTAGCTAACACAGATTTACC+TGG | - | chr7.2:31902500-31902519 | MS.gene42080:intron | 35.0% | |
AAACTTTGTACGACTTAGCC+CGG | + | chr7.2:31902702-31902721 | None:intergenic | 40.0% | |
AGACCATCTAGATTTGAACC+AGG | + | chr7.2:31902527-31902546 | None:intergenic | 40.0% | |
AGCACGATTTGTATCATAGC+AGG | + | chr7.2:31902320-31902339 | None:intergenic | 40.0% | |
AGGTTTCACACCCAAAGAAA+TGG | - | chr7.2:31902568-31902587 | MS.gene42080:intron | 40.0% | |
CAGAACTTGCAAAGCCAAAA+GGG | - | chr7.2:31903108-31903127 | MS.gene42080:intron | 40.0% | |
CCCCTTAAGGAATTAGCATT+TGG | + | chr7.2:31902082-31902101 | None:intergenic | 40.0% | |
GACGATACAACAAGTTTCAC+AGG | - | chr7.2:31902040-31902059 | MS.gene42080:intron | 40.0% | |
GAGAGAAATAGATTCTGCTG+TGG | - | chr7.2:31900870-31900889 | MS.gene42080:CDS | 40.0% | |
GGGAACCTTAATCCAATTAC+TGG | - | chr7.2:31903249-31903268 | MS.gene42080:CDS | 40.0% | |
TCAATTGATTACCCTGCAGT+TGG | + | chr7.2:31903295-31903314 | None:intergenic | 40.0% | |
TCACTCTCATCGTTCATTAG+CGG | + | chr7.2:31902747-31902766 | None:intergenic | 40.0% | |
TGACCATTAGACCCAGTAAT+TGG | + | chr7.2:31903264-31903283 | None:intergenic | 40.0% | |
TTCACAGGTGAAAAAACAGC+AGG | - | chr7.2:31902055-31902074 | MS.gene42080:intron | 40.0% | |
TTCATCAACATCATCGTCAG+TGG | + | chr7.2:31903172-31903191 | None:intergenic | 40.0% | |
TTCCTCTAGTGCAGTCTTTA+TGG | + | chr7.2:31902122-31902141 | None:intergenic | 40.0% | |
! | AAAACTCGGCATTGAGTCTT+AGG | + | chr7.2:31902789-31902808 | None:intergenic | 40.0% |
! | CAGAAGAAAAGAGACCCTTT+TGG | + | chr7.2:31903125-31903144 | None:intergenic | 40.0% |
! | TCTGATCAAGCGCTTTTCAA+TGG | - | chr7.2:31903141-31903160 | MS.gene42080:intron | 40.0% |
AACACAGATTTACCTGGTCC+TGG | - | chr7.2:31902506-31902525 | MS.gene42080:intron | 45.0% | |
ACCTAGTTGGACAGTGCAAT+TGG | - | chr7.2:31902445-31902464 | MS.gene42080:intron | 45.0% | |
AGATTCTGCTGTGGGTAATG+AGG | - | chr7.2:31900879-31900898 | MS.gene42080:CDS | 45.0% | |
CAAATTGTCATCACCACCTG+TGG | + | chr7.2:31903040-31903059 | None:intergenic | 45.0% | |
CAAGCAAATTGTCCTACCAC+AGG | - | chr7.2:31903021-31903040 | MS.gene42080:intron | 45.0% | |
CACCATAAAGACTGCACTAG+AGG | - | chr7.2:31902117-31902136 | MS.gene42080:intron | 45.0% | |
CCAGAACTTGCAAAGCCAAA+AGG | - | chr7.2:31903107-31903126 | MS.gene42080:intron | 45.0% | |
CCTAGTTGGACAGTGCAATT+GGG | - | chr7.2:31902446-31902465 | MS.gene42080:intron | 45.0% | |
CTGGGTCTAATGGTCAGATT+AGG | - | chr7.2:31903268-31903287 | MS.gene42080:CDS | 45.0% | |
GGTCCTGGTTCAAATCTAGA+TGG | - | chr7.2:31902521-31902540 | MS.gene42080:intron | 45.0% | |
TCAGATTAGGACCAACTGCA+GGG | - | chr7.2:31903281-31903300 | MS.gene42080:CDS | 45.0% | |
TCTAGATTTGAACCAGGACC+AGG | + | chr7.2:31902521-31902540 | None:intergenic | 45.0% | |
! | CACAGGTGGTGATGACAATT+TGG | - | chr7.2:31903038-31903057 | MS.gene42080:intron | 45.0% |
! | GATCAAGCGCTTTTCAATGG+AGG | - | chr7.2:31903144-31903163 | MS.gene42080:intron | 45.0% |
! | GTCAAATGTGTTTGGAGTGG+TGG | + | chr7.2:31903076-31903095 | None:intergenic | 45.0% |
! | TAGCCCGGAGAAATTGACTT+CGG | + | chr7.2:31902687-31902706 | None:intergenic | 45.0% |
!!! | CCTTTTGGCTTTGCAAGTTC+TGG | + | chr7.2:31903110-31903129 | None:intergenic | 45.0% |
ATATCCTCTCTGTTGCGGCA+AGG | - | chr7.2:31902170-31902189 | MS.gene42080:intron | 50.0% | |
CAGCGCATGAGACAGTTCTA+GGG | + | chr7.2:31902150-31902169 | None:intergenic | 50.0% | |
CCCAATTGCACTGTCCAACT+AGG | + | chr7.2:31902449-31902468 | None:intergenic | 50.0% | |
CCTCCCGAAGTCAATTTCTC+CGG | - | chr7.2:31902680-31902699 | MS.gene42080:intron | 50.0% | |
CGCTGATATCCTCTCTGTTG+CGG | - | chr7.2:31902165-31902184 | MS.gene42080:intron | 50.0% | |
CTCCCGAAGTCAATTTCTCC+GGG | - | chr7.2:31902681-31902700 | MS.gene42080:intron | 50.0% | |
GACAGTGCAATTGGGCAGAA+GGG | - | chr7.2:31902454-31902473 | MS.gene42080:intron | 50.0% | |
GCAAATTGTCCTACCACAGG+TGG | - | chr7.2:31903024-31903043 | MS.gene42080:intron | 50.0% | |
GTCAGATTAGGACCAACTGC+AGG | - | chr7.2:31903280-31903299 | MS.gene42080:CDS | 50.0% | |
GTGGGTAATGAGGCTCGTAT+GGG | - | chr7.2:31900889-31900908 | MS.gene42080:CDS | 50.0% | |
TATCCTCTCTGTTGCGGCAA+GGG | - | chr7.2:31902171-31902190 | MS.gene42080:intron | 50.0% | |
TCAGCGCATGAGACAGTTCT+AGG | + | chr7.2:31902151-31902170 | None:intergenic | 50.0% | |
TGGGTAATGAGGCTCGTATG+GGG | - | chr7.2:31900890-31900909 | MS.gene42080:CDS | 50.0% | |
TGTGGGTAATGAGGCTCGTA+TGG | - | chr7.2:31900888-31900907 | MS.gene42080:CDS | 50.0% | |
TTCAGCTAGGTGGACCTAGT+TGG | - | chr7.2:31902432-31902451 | MS.gene42080:intron | 50.0% | |
TTGTCATCACCACCTGTGGT+AGG | + | chr7.2:31903036-31903055 | None:intergenic | 50.0% | |
! | AGCCCGGAGAAATTGACTTC+GGG | + | chr7.2:31902686-31902705 | None:intergenic | 50.0% |
! | TTTGGAGTGGTGGTGTCAAG+TGG | + | chr7.2:31903066-31903085 | None:intergenic | 50.0% |
CAACTGCAGGTGAGTCAGTG+TGG | - | chr7.2:31901340-31901359 | MS.gene42080:intron | 55.0% | |
GGACAGTGCAATTGGGCAGA+AGG | - | chr7.2:31902453-31902472 | MS.gene42080:intron | 55.0% | |
GGGTAATGAGGCTCGTATGG+GGG | - | chr7.2:31900891-31900910 | MS.gene42080:CDS | 55.0% | |
! | CCGGAGAAATTGACTTCGGG+AGG | + | chr7.2:31902683-31902702 | None:intergenic | 55.0% |
AGTCCCTTGCCGCAACAGAG+AGG | + | chr7.2:31902177-31902196 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 31900760 | 31903314 | 31900760 | ID=MS.gene42080 |
chr7.2 | mRNA | 31900760 | 31903314 | 31900760 | ID=MS.gene42080.t1;Parent=MS.gene42080 |
chr7.2 | exon | 31903186 | 31903314 | 31903186 | ID=MS.gene42080.t1.exon1;Parent=MS.gene42080.t1 |
chr7.2 | CDS | 31903186 | 31903314 | 31903186 | ID=cds.MS.gene42080.t1;Parent=MS.gene42080.t1 |
chr7.2 | exon | 31901867 | 31902058 | 31901867 | ID=MS.gene42080.t1.exon2;Parent=MS.gene42080.t1 |
chr7.2 | CDS | 31901867 | 31902058 | 31901867 | ID=cds.MS.gene42080.t1;Parent=MS.gene42080.t1 |
chr7.2 | exon | 31901472 | 31901637 | 31901472 | ID=MS.gene42080.t1.exon3;Parent=MS.gene42080.t1 |
chr7.2 | CDS | 31901472 | 31901637 | 31901472 | ID=cds.MS.gene42080.t1;Parent=MS.gene42080.t1 |
chr7.2 | exon | 31900760 | 31901145 | 31900760 | ID=MS.gene42080.t1.exon4;Parent=MS.gene42080.t1 |
chr7.2 | CDS | 31900760 | 31901145 | 31900760 | ID=cds.MS.gene42080.t1;Parent=MS.gene42080.t1 |
Gene Sequence |
Protein sequence |