Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48899.t1 | XP_024638485.1 | 97.2 | 713 | 20 | 0 | 2 | 714 | 1 | 713 | 0.00E+00 | 1362.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48899.t1 | Q9MA15 | 73.3 | 703 | 173 | 3 | 23 | 713 | 8 | 707 | 4.1e-295 | 1015.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48899.t1 | G7JFX0 | 97.2 | 713 | 20 | 0 | 2 | 714 | 1 | 713 | 0.0e+00 | 1362.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049149 | MS.gene48899 | 0.815189 | 1.05E-51 | -1.69E-46 |
| MS.gene049150 | MS.gene48899 | 0.858529 | 7.74E-63 | -1.69E-46 |
| MS.gene049151 | MS.gene48899 | 0.809157 | 2.17E-50 | -1.69E-46 |
| MS.gene049153 | MS.gene48899 | 0.85238 | 4.79E-61 | -1.69E-46 |
| MS.gene049260 | MS.gene48899 | 0.802981 | 4.33E-49 | -1.69E-46 |
| MS.gene049297 | MS.gene48899 | 0.846499 | 2.09E-59 | -1.69E-46 |
| MS.gene049346 | MS.gene48899 | 0.812629 | 3.85E-51 | -1.69E-46 |
| MS.gene049378 | MS.gene48899 | 0.846178 | 2.56E-59 | -1.69E-46 |
| MS.gene049758 | MS.gene48899 | 0.809748 | 1.62E-50 | -1.69E-46 |
| MS.gene049910 | MS.gene48899 | 0.812957 | 3.26E-51 | -1.69E-46 |
| MS.gene049993 | MS.gene48899 | 0.834729 | 2.53E-56 | -1.69E-46 |
| MS.gene050168 | MS.gene48899 | 0.800458 | 1.43E-48 | -1.69E-46 |
| MS.gene050226 | MS.gene48899 | 0.8265 | 2.62E-54 | -1.69E-46 |
| MS.gene050227 | MS.gene48899 | 0.833004 | 6.84E-56 | -1.69E-46 |
| MS.gene050228 | MS.gene48899 | 0.832889 | 7.31E-56 | -1.69E-46 |
| MS.gene050301 | MS.gene48899 | 0.809723 | 1.64E-50 | -1.69E-46 |
| MS.gene050330 | MS.gene48899 | -0.831302 | 1.80E-55 | -1.69E-46 |
| MS.gene050426 | MS.gene48899 | -0.851564 | 8.17E-61 | -1.69E-46 |
| MS.gene050558 | MS.gene48899 | 0.821883 | 3.19E-53 | -1.69E-46 |
| MS.gene050623 | MS.gene48899 | -0.817398 | 3.37E-52 | -1.69E-46 |
| MS.gene050642 | MS.gene48899 | 0.896217 | 4.56E-76 | -1.69E-46 |
| MS.gene050820 | MS.gene48899 | 0.829459 | 5.09E-55 | -1.69E-46 |
| MS.gene051171 | MS.gene48899 | 0.809068 | 2.27E-50 | -1.69E-46 |
| MS.gene051208 | MS.gene48899 | 0.825703 | 4.06E-54 | -1.69E-46 |
| MS.gene051240 | MS.gene48899 | 0.807949 | 3.94E-50 | -1.69E-46 |
| MS.gene051257 | MS.gene48899 | 0.800764 | 1.24E-48 | -1.69E-46 |
| MS.gene05137 | MS.gene48899 | 0.805559 | 1.26E-49 | -1.69E-46 |
| MS.gene051525 | MS.gene48899 | 0.828567 | 8.37E-55 | -1.69E-46 |
| MS.gene051582 | MS.gene48899 | 0.830419 | 2.97E-55 | -1.69E-46 |
| MS.gene051860 | MS.gene48899 | 0.842991 | 1.84E-58 | -1.69E-46 |
| MS.gene051983 | MS.gene48899 | 0.908854 | 1.08E-81 | -1.69E-46 |
| MS.gene052011 | MS.gene48899 | -0.863309 | 2.73E-64 | -1.69E-46 |
| MS.gene052077 | MS.gene48899 | 0.85388 | 1.78E-61 | -1.69E-46 |
| MS.gene052135 | MS.gene48899 | 0.800488 | 1.41E-48 | -1.69E-46 |
| MS.gene052176 | MS.gene48899 | 0.858777 | 6.53E-63 | -1.69E-46 |
| MS.gene052188 | MS.gene48899 | 0.811379 | 7.21E-51 | -1.69E-46 |
| MS.gene052253 | MS.gene48899 | 0.823877 | 1.09E-53 | -1.69E-46 |
| MS.gene052255 | MS.gene48899 | 0.801208 | 1.00E-48 | -1.69E-46 |
| MS.gene052309 | MS.gene48899 | -0.814944 | 1.19E-51 | -1.69E-46 |
| MS.gene052340 | MS.gene48899 | 0.824686 | 7.06E-54 | -1.69E-46 |
| MS.gene052389 | MS.gene48899 | 0.853359 | 2.52E-61 | -1.69E-46 |
| MS.gene052590 | MS.gene48899 | 0.818035 | 2.42E-52 | -1.69E-46 |
| MS.gene052600 | MS.gene48899 | 0.85241 | 4.70E-61 | -1.69E-46 |
| MS.gene053330 | MS.gene48899 | 0.846341 | 2.31E-59 | -1.69E-46 |
| MS.gene053836 | MS.gene48899 | 0.860932 | 1.46E-63 | -1.69E-46 |
| MS.gene053928 | MS.gene48899 | 0.840182 | 1.01E-57 | -1.69E-46 |
| MS.gene054102 | MS.gene48899 | 0.804561 | 2.04E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene48899 | 0.853205 | 2.79E-61 | -1.69E-46 |
| MS.gene054349 | MS.gene48899 | 0.813195 | 2.89E-51 | -1.69E-46 |
| MS.gene054473 | MS.gene48899 | 0.806425 | 8.28E-50 | -1.69E-46 |
| MS.gene054556 | MS.gene48899 | 0.802158 | 6.41E-49 | -1.69E-46 |
| MS.gene054719 | MS.gene48899 | 0.867846 | 1.01E-65 | -1.69E-46 |
| MS.gene054918 | MS.gene48899 | 0.800143 | 1.65E-48 | -1.69E-46 |
| MS.gene054930 | MS.gene48899 | 0.835072 | 2.08E-56 | -1.69E-46 |
| MS.gene054942 | MS.gene48899 | 0.846937 | 1.59E-59 | -1.69E-46 |
| MS.gene054983 | MS.gene48899 | 0.840791 | 7.03E-58 | -1.69E-46 |
| MS.gene055217 | MS.gene48899 | 0.83381 | 4.31E-56 | -1.69E-46 |
| MS.gene055356 | MS.gene48899 | 0.818871 | 1.56E-52 | -1.69E-46 |
| MS.gene055358 | MS.gene48899 | 0.821872 | 3.20E-53 | -1.69E-46 |
| MS.gene055367 | MS.gene48899 | 0.823766 | 1.16E-53 | -1.69E-46 |
| MS.gene055428 | MS.gene48899 | 0.80836 | 3.22E-50 | -1.69E-46 |
| MS.gene05553 | MS.gene48899 | 0.879623 | 1.07E-69 | -1.69E-46 |
| MS.gene055604 | MS.gene48899 | 0.806995 | 6.27E-50 | -1.69E-46 |
| MS.gene055701 | MS.gene48899 | 0.827689 | 1.36E-54 | -1.69E-46 |
| MS.gene056087 | MS.gene48899 | 0.825969 | 3.51E-54 | -1.69E-46 |
| MS.gene056612 | MS.gene48899 | 0.802323 | 5.92E-49 | -1.69E-46 |
| MS.gene056659 | MS.gene48899 | 0.806773 | 6.99E-50 | -1.69E-46 |
| MS.gene056723 | MS.gene48899 | 0.837484 | 5.06E-57 | -1.69E-46 |
| MS.gene056899 | MS.gene48899 | -0.818603 | 1.80E-52 | -1.69E-46 |
| MS.gene056979 | MS.gene48899 | 0.893685 | 4.99E-75 | -1.69E-46 |
| MS.gene057121 | MS.gene48899 | 0.842839 | 2.02E-58 | -1.69E-46 |
| MS.gene057396 | MS.gene48899 | 0.821913 | 3.14E-53 | -1.69E-46 |
| MS.gene057469 | MS.gene48899 | 0.805158 | 1.53E-49 | -1.69E-46 |
| MS.gene057639 | MS.gene48899 | 0.821549 | 3.81E-53 | -1.69E-46 |
| MS.gene058002 | MS.gene48899 | 0.847802 | 9.18E-60 | -1.69E-46 |
| MS.gene05811 | MS.gene48899 | 0.836014 | 1.20E-56 | -1.69E-46 |
| MS.gene058139 | MS.gene48899 | 0.822971 | 1.78E-53 | -1.69E-46 |
| MS.gene058142 | MS.gene48899 | 0.917203 | 7.06E-86 | -1.69E-46 |
| MS.gene058276 | MS.gene48899 | 0.863297 | 2.75E-64 | -1.69E-46 |
| MS.gene058710 | MS.gene48899 | 0.846814 | 1.71E-59 | -1.69E-46 |
| MS.gene058746 | MS.gene48899 | 0.804329 | 2.28E-49 | -1.69E-46 |
| MS.gene058749 | MS.gene48899 | 0.82355 | 1.30E-53 | -1.69E-46 |
| MS.gene058833 | MS.gene48899 | 0.830058 | 3.64E-55 | -1.69E-46 |
| MS.gene05886 | MS.gene48899 | 0.821145 | 4.72E-53 | -1.69E-46 |
| MS.gene05907 | MS.gene48899 | 0.819198 | 1.32E-52 | -1.69E-46 |
| MS.gene059247 | MS.gene48899 | 0.936372 | 1.93E-97 | -1.69E-46 |
| MS.gene059285 | MS.gene48899 | 0.836837 | 7.40E-57 | -1.69E-46 |
| MS.gene059420 | MS.gene48899 | 0.843125 | 1.70E-58 | -1.69E-46 |
| MS.gene05984 | MS.gene48899 | 0.85114 | 1.08E-60 | -1.69E-46 |
| MS.gene059894 | MS.gene48899 | 0.81565 | 8.29E-52 | -1.69E-46 |
| MS.gene059899 | MS.gene48899 | 0.813744 | 2.19E-51 | -1.69E-46 |
| MS.gene060083 | MS.gene48899 | 0.808094 | 3.67E-50 | -1.69E-46 |
| MS.gene060407 | MS.gene48899 | 0.844914 | 5.63E-59 | -1.69E-46 |
| MS.gene061040 | MS.gene48899 | -0.803066 | 4.16E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene48899 | 0.835465 | 1.65E-56 | -1.69E-46 |
| MS.gene061114 | MS.gene48899 | -0.876291 | 1.57E-68 | -1.69E-46 |
| MS.gene061159 | MS.gene48899 | 0.829144 | 6.07E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48899.t1 | MTR_4g026450 | 97.195 | 713 | 20 | 0 | 2 | 714 | 1 | 713 | 0.0 | 1414 |
| MS.gene48899.t1 | MTR_0053s0030 | 78.205 | 702 | 144 | 3 | 14 | 714 | 8 | 701 | 0.0 | 1092 |
| MS.gene48899.t1 | MTR_6g038750 | 41.273 | 550 | 294 | 8 | 102 | 639 | 78 | 610 | 1.18e-139 | 426 |
| MS.gene48899.t1 | MTR_1g046620 | 42.457 | 464 | 258 | 5 | 101 | 561 | 132 | 589 | 1.35e-129 | 402 |
| MS.gene48899.t1 | MTR_1g009860 | 38.286 | 525 | 314 | 6 | 65 | 582 | 37 | 558 | 1.21e-126 | 390 |
| MS.gene48899.t1 | MTR_1g009860 | 35.437 | 618 | 367 | 12 | 65 | 673 | 37 | 631 | 3.23e-126 | 390 |
| MS.gene48899.t1 | MTR_3g105760 | 37.328 | 509 | 272 | 7 | 168 | 642 | 136 | 631 | 7.71e-114 | 359 |
| MS.gene48899.t1 | MTR_1g095480 | 35.516 | 504 | 290 | 10 | 102 | 579 | 139 | 633 | 7.87e-88 | 293 |
| MS.gene48899.t1 | MTR_1g095480 | 35.593 | 472 | 276 | 8 | 101 | 547 | 138 | 606 | 1.86e-86 | 285 |
| MS.gene48899.t1 | MTR_3g094740 | 33.853 | 449 | 253 | 9 | 144 | 556 | 191 | 631 | 1.29e-72 | 250 |
| MS.gene48899.t1 | MTR_3g094740 | 33.853 | 449 | 253 | 9 | 144 | 556 | 191 | 631 | 1.82e-72 | 250 |
| MS.gene48899.t1 | MTR_8g091710 | 32.211 | 475 | 270 | 10 | 122 | 556 | 160 | 622 | 1.87e-71 | 247 |
| MS.gene48899.t1 | MTR_3g082750 | 34.872 | 390 | 241 | 5 | 149 | 531 | 197 | 580 | 2.06e-68 | 238 |
| MS.gene48899.t1 | MTR_0224s0030 | 35.021 | 237 | 142 | 4 | 349 | 579 | 19 | 249 | 4.38e-42 | 155 |
| MS.gene48899.t1 | MTR_5g068050 | 25.381 | 394 | 261 | 5 | 156 | 519 | 128 | 518 | 1.05e-36 | 145 |
| MS.gene48899.t1 | MTR_5g077080 | 34.241 | 257 | 153 | 6 | 167 | 415 | 98 | 346 | 5.30e-35 | 140 |
| MS.gene48899.t1 | MTR_1g008980 | 31.930 | 285 | 166 | 6 | 167 | 433 | 65 | 339 | 6.07e-35 | 142 |
| MS.gene48899.t1 | MTR_4g104070 | 26.010 | 396 | 264 | 10 | 137 | 516 | 59 | 441 | 2.09e-33 | 134 |
| MS.gene48899.t1 | MTR_8g464860 | 25.917 | 409 | 263 | 7 | 143 | 521 | 199 | 597 | 1.53e-28 | 121 |
| MS.gene48899.t1 | MTR_3g070410 | 28.125 | 288 | 186 | 6 | 140 | 409 | 74 | 358 | 3.24e-27 | 117 |
| MS.gene48899.t1 | MTR_0092s0090 | 61.739 | 115 | 9 | 1 | 202 | 316 | 214 | 293 | 4.93e-23 | 101 |
| MS.gene48899.t1 | MTR_0092s0090 | 92.683 | 41 | 3 | 0 | 391 | 431 | 302 | 342 | 6.04e-17 | 83.2 |
| MS.gene48899.t1 | MTR_4g091510 | 24.190 | 401 | 263 | 9 | 151 | 519 | 208 | 599 | 5.12e-22 | 101 |
| MS.gene48899.t1 | MTR_4g091510 | 24.190 | 401 | 263 | 9 | 151 | 519 | 213 | 604 | 5.43e-22 | 101 |
| MS.gene48899.t1 | MTR_2g011640 | 27.090 | 299 | 185 | 6 | 162 | 435 | 275 | 565 | 6.45e-22 | 101 |
| MS.gene48899.t1 | MTR_1g085610 | 29.110 | 292 | 174 | 9 | 168 | 444 | 242 | 515 | 7.21e-21 | 97.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48899.t1 | AT1G79600 | 72.896 | 701 | 181 | 1 | 23 | 714 | 8 | 708 | 0.0 | 1041 |
| MS.gene48899.t1 | AT1G71810 | 43.053 | 511 | 271 | 5 | 111 | 611 | 78 | 578 | 1.87e-139 | 426 |
| MS.gene48899.t1 | AT3G24190 | 43.319 | 464 | 254 | 6 | 101 | 561 | 140 | 597 | 5.29e-131 | 407 |
| MS.gene48899.t1 | AT4G31390 | 40.412 | 485 | 282 | 3 | 102 | 582 | 113 | 594 | 2.95e-126 | 391 |
| MS.gene48899.t1 | AT5G24970 | 38.545 | 550 | 281 | 9 | 102 | 606 | 93 | 630 | 8.58e-121 | 378 |
| MS.gene48899.t1 | AT5G24970 | 38.545 | 550 | 281 | 9 | 102 | 606 | 132 | 669 | 3.67e-120 | 377 |
| MS.gene48899.t1 | AT4G31390 | 39.175 | 485 | 263 | 4 | 102 | 582 | 113 | 569 | 3.76e-117 | 366 |
| MS.gene48899.t1 | AT5G24970 | 38.000 | 550 | 281 | 10 | 102 | 606 | 93 | 627 | 2.12e-116 | 366 |
| MS.gene48899.t1 | AT4G31390 | 41.709 | 398 | 228 | 2 | 186 | 582 | 1 | 395 | 1.03e-109 | 341 |
| MS.gene48899.t1 | AT2G39190 | 33.578 | 545 | 302 | 13 | 101 | 596 | 145 | 678 | 6.37e-85 | 285 |
| MS.gene48899.t1 | AT3G07700 | 34.586 | 399 | 254 | 4 | 138 | 531 | 171 | 567 | 1.53e-70 | 244 |
| MS.gene48899.t1 | AT3G07700 | 34.586 | 399 | 254 | 4 | 138 | 531 | 171 | 567 | 1.53e-70 | 244 |
| MS.gene48899.t1 | AT3G07700 | 34.586 | 399 | 254 | 4 | 138 | 531 | 171 | 567 | 1.53e-70 | 244 |
| MS.gene48899.t1 | AT5G64940 | 33.480 | 454 | 256 | 9 | 141 | 556 | 203 | 648 | 2.14e-69 | 242 |
| MS.gene48899.t1 | AT5G64940 | 33.480 | 454 | 256 | 9 | 141 | 556 | 203 | 648 | 2.14e-69 | 242 |
| MS.gene48899.t1 | AT3G07700 | 33.100 | 429 | 249 | 6 | 138 | 531 | 171 | 596 | 7.10e-68 | 237 |
| MS.gene48899.t1 | AT5G05200 | 26.010 | 396 | 256 | 5 | 156 | 519 | 129 | 519 | 4.03e-39 | 152 |
| MS.gene48899.t1 | AT4G24810 | 27.848 | 316 | 201 | 7 | 137 | 437 | 13 | 316 | 5.82e-37 | 141 |
| MS.gene48899.t1 | AT4G24810 | 29.054 | 296 | 183 | 7 | 137 | 417 | 13 | 296 | 1.16e-36 | 140 |
| MS.gene48899.t1 | AT4G24810 | 24.709 | 429 | 266 | 10 | 137 | 532 | 13 | 417 | 2.59e-36 | 142 |
| MS.gene48899.t1 | AT4G24810 | 24.709 | 429 | 266 | 10 | 137 | 532 | 13 | 417 | 2.59e-36 | 142 |
| MS.gene48899.t1 | AT4G24810 | 24.709 | 429 | 266 | 10 | 137 | 532 | 56 | 460 | 6.40e-36 | 142 |
| MS.gene48899.t1 | AT4G24810 | 24.541 | 436 | 265 | 11 | 137 | 532 | 13 | 424 | 3.09e-34 | 136 |
| MS.gene48899.t1 | AT5G24810 | 32.667 | 300 | 167 | 9 | 137 | 418 | 89 | 371 | 4.17e-34 | 140 |
| MS.gene48899.t1 | AT2G39190 | 37.788 | 217 | 129 | 4 | 101 | 314 | 145 | 358 | 1.31e-33 | 133 |
| MS.gene48899.t1 | AT1G65950 | 32.411 | 253 | 163 | 4 | 167 | 415 | 113 | 361 | 3.50e-33 | 134 |
| MS.gene48899.t1 | AT1G65950 | 32.411 | 253 | 163 | 4 | 167 | 415 | 113 | 361 | 1.42e-32 | 133 |
| MS.gene48899.t1 | AT5G50330 | 28.527 | 319 | 201 | 9 | 137 | 440 | 56 | 362 | 1.54e-32 | 132 |
| MS.gene48899.t1 | AT5G24810 | 29.909 | 331 | 166 | 10 | 137 | 418 | 89 | 402 | 2.79e-29 | 125 |
| MS.gene48899.t1 | AT2G40090 | 29.373 | 303 | 189 | 9 | 153 | 435 | 89 | 386 | 4.16e-28 | 119 |
| MS.gene48899.t1 | AT5G50330 | 26.646 | 319 | 191 | 10 | 137 | 440 | 56 | 346 | 1.86e-26 | 114 |
| MS.gene48899.t1 | AT1G11390 | 25.000 | 404 | 257 | 10 | 150 | 519 | 207 | 598 | 1.85e-24 | 109 |
| MS.gene48899.t1 | AT1G61640 | 24.121 | 398 | 253 | 9 | 156 | 519 | 213 | 595 | 9.98e-24 | 107 |
| MS.gene48899.t1 | AT1G61640 | 26.774 | 310 | 186 | 7 | 156 | 435 | 213 | 511 | 1.60e-23 | 106 |
| MS.gene48899.t1 | AT4G01660 | 27.491 | 291 | 184 | 9 | 168 | 446 | 240 | 515 | 5.31e-19 | 92.0 |
| MS.gene48899.t1 | AT1G61640 | 27.317 | 205 | 126 | 4 | 156 | 345 | 213 | 409 | 7.48e-15 | 78.2 |
Find 136 sgRNAs with CRISPR-Local
Find 378 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCAGATTGTGTTTAATT+TGG | 0.146085 | 4.3:+72324610 | MS.gene48899:CDS |
| TTGTATCAATATCCATTTAA+TGG | 0.197786 | 4.3:+72327399 | MS.gene48899:CDS |
| CAACTTGTTGCTTCAAGATA+TGG | 0.207079 | 4.3:+72323918 | MS.gene48899:CDS |
| GAAGCGAGATTTGCAATAAT+TGG | 0.217043 | 4.3:+72327186 | MS.gene48899:CDS |
| TGCAGCAAGCACCTTAAAAT+TGG | 0.225494 | 4.3:-72327800 | None:intergenic |
| TTCTACCTCATTAGAGGTTT+AGG | 0.250334 | 4.3:+72326116 | MS.gene48899:CDS |
| GAATGCATTGAGAGGGAATT+AGG | 0.251683 | 4.3:+72325939 | MS.gene48899:CDS |
| ATTGCAAATCTCGCTTCTTC+TGG | 0.262758 | 4.3:-72327180 | None:intergenic |
| GTGTTTAATTTGGGTTCATT+TGG | 0.267830 | 4.3:+72324620 | MS.gene48899:CDS |
| TTTCAGATTGTGTTTAATTT+GGG | 0.276250 | 4.3:+72324611 | MS.gene48899:CDS |
| TCTACCTCATTAGAGGTTTA+GGG | 0.280854 | 4.3:+72326117 | MS.gene48899:CDS |
| CATACTATGCGTTGATATTA+AGG | 0.284829 | 4.3:+72327737 | MS.gene48899:CDS |
| ATGCTCTTGATTTCTTATCT+AGG | 0.293725 | 4.3:+72327262 | MS.gene48899:CDS |
| CCCATTTCTCCATGGATTCA+TGG | 0.303060 | 4.3:+72323648 | MS.gene48899:CDS |
| AACATTATCTCACCATTAAA+TGG | 0.304241 | 4.3:-72327411 | None:intergenic |
| CGCTTTCTTATGCAATTACT+TGG | 0.319801 | 4.3:+72329495 | MS.gene48899:CDS |
| TCCTCATCCTGGTAATCTTT+TGG | 0.321004 | 4.3:+72327104 | MS.gene48899:CDS |
| CAACCTGAGGCCCGTAAACT+TGG | 0.330945 | 4.3:+72329432 | MS.gene48899:CDS |
| GCCATGAATCCATGGAGAAA+TGG | 0.337735 | 4.3:-72323649 | None:intergenic |
| ATTAAGGTCTCTCACTGTTC+TGG | 0.337948 | 4.3:+72327753 | MS.gene48899:CDS |
| TTGGACTTCTACCTCATTAG+AGG | 0.338286 | 4.3:+72326110 | MS.gene48899:CDS |
| GCTTGAAAACCTTCTAGTTC+AGG | 0.339166 | 4.3:+72328275 | MS.gene48899:CDS |
| CCGATAGCTGCTGCTAGTTT+AGG | 0.342246 | 4.3:+72326002 | MS.gene48899:CDS |
| TGTTTAATTTGGGTTCATTT+GGG | 0.356535 | 4.3:+72324621 | MS.gene48899:CDS |
| GAGTTGCTGATCAGAATAAA+AGG | 0.357382 | 4.3:+72324672 | MS.gene48899:CDS |
| TTTCGAAGTGCAGGAACAAT+TGG | 0.368170 | 4.3:-72327300 | None:intergenic |
| AGAAATGGGTTGTTGATATA+TGG | 0.368325 | 4.3:-72323634 | None:intergenic |
| GCATCTCTTAGATATGGATT+TGG | 0.372745 | 4.3:-72327859 | None:intergenic |
| TTGAGGAACCTTGTCTTCAA+TGG | 0.379397 | 4.3:+72328471 | MS.gene48899:CDS |
| TACTCAGATGGACAAATATC+AGG | 0.388127 | 4.3:-72324776 | None:intergenic |
| ATCAGAGCATCTCTTAGATA+TGG | 0.388348 | 4.3:-72327865 | None:intergenic |
| ACGAAACTGTGAATTCAATA+AGG | 0.388723 | 4.3:-72323727 | None:intergenic |
| GAGATCAAGTGATTAGGATA+TGG | 0.389231 | 4.3:+72328553 | MS.gene48899:CDS |
| AAGACGATTGTGGACGGTCT+CGG | 0.394059 | 4.3:+72327369 | MS.gene48899:CDS |
| ATATGGTTCTAAACCCTTCA+AGG | 0.397792 | 4.3:+72323935 | MS.gene48899:CDS |
| CATTCAAAGGCGTCCTCGTC+AGG | 0.401484 | 4.3:-72325921 | None:intergenic |
| GAAACTGAACTTTGTGATGA+TGG | 0.402520 | 4.3:-72323771 | None:intergenic |
| GCCTTAAGGGAACCATCTTT+AGG | 0.402827 | 4.3:-72323807 | None:intergenic |
| TTCACAGTTTCGTGCTGCTT+TGG | 0.406279 | 4.3:+72323737 | MS.gene48899:CDS |
| TGGAAGTGCAAGAGCCTTAA+GGG | 0.410212 | 4.3:-72323820 | None:intergenic |
| TGATGAGGTGAGATTTGAAA+TGG | 0.422742 | 4.3:-72323679 | None:intergenic |
| TGCTCTTGATTTCTTATCTA+GGG | 0.422756 | 4.3:+72327263 | MS.gene48899:CDS |
| TGACCCAATTTGACAAAAGT+TGG | 0.428903 | 4.3:-72324737 | None:intergenic |
| AGCTGCTGCTAGTTTAGGTC+AGG | 0.429613 | 4.3:+72326007 | MS.gene48899:CDS |
| TCAGTTTCTGACATCATAAG+TGG | 0.430403 | 4.3:-72328507 | None:intergenic |
| AGAAATATATTCACTAAGCT+TGG | 0.434347 | 4.3:+72324713 | MS.gene48899:CDS |
| TTGGAAGTGCAAGAGCCTTA+AGG | 0.438124 | 4.3:-72323821 | None:intergenic |
| TCATGCTGAGGCAAAAGCTT+TGG | 0.439035 | 4.3:+72323863 | MS.gene48899:CDS |
| CTTGAAAACCTTCTAGTTCA+GGG | 0.442279 | 4.3:+72328276 | MS.gene48899:CDS |
| AGGAACATACCGGTATGTTT+CGG | 0.445651 | 4.3:-72328442 | None:intergenic |
| TACCTTCAGGACAGGTTGTA+AGG | 0.451984 | 4.3:-72328331 | None:intergenic |
| GAGGCAAGGGCTTAACGTCT+TGG | 0.458687 | 4.3:+72327014 | MS.gene48899:CDS |
| ACCTAAAGATGGTTCCCTTA+AGG | 0.465316 | 4.3:+72323806 | MS.gene48899:CDS |
| AACCTGAGGCCCGTAAACTT+GGG | 0.465701 | 4.3:+72329433 | MS.gene48899:CDS |
| TTATCAACATCACCTAAAGA+TGG | 0.471856 | 4.3:+72323795 | MS.gene48899:CDS |
| GCGGTCAAGGTCCAACGCCC+TGG | 0.472478 | 4.3:+72326068 | MS.gene48899:CDS |
| AGCTCAGAGATCAAGTGATT+AGG | 0.475418 | 4.3:+72328547 | MS.gene48899:CDS |
| CCATGAATCCATGGAGAAAT+GGG | 0.476332 | 4.3:-72323648 | None:intergenic |
| GAAATATCACAAAACCTTGA+AGG | 0.478269 | 4.3:-72323949 | None:intergenic |
| GCAGCAAGCACCTTAAAATT+GGG | 0.485400 | 4.3:-72327799 | None:intergenic |
| TAAGGCTCTTGCACTTCCAA+TGG | 0.486887 | 4.3:+72323824 | MS.gene48899:CDS |
| CCTATAGCTTCTTCAATGCC+AGG | 0.489261 | 4.3:-72326086 | None:intergenic |
| TCAAGAGCTTAATTATGTGC+AGG | 0.492075 | 4.3:+72326217 | MS.gene48899:CDS |
| GGGCAAAGTTGTTGCGGTCA+AGG | 0.500027 | 4.3:+72326055 | MS.gene48899:CDS |
| TTCCTCAGAACTTCACCATC+AGG | 0.502663 | 4.3:-72328363 | None:intergenic |
| GATGAGGTGAGATTTGAAAT+GGG | 0.504597 | 4.3:-72323678 | None:intergenic |
| AAAGCTCGGTTGAAGCGGTC+GGG | 0.505739 | 4.3:+72326035 | MS.gene48899:CDS |
| CCTGGCATTGAAGAAGCTAT+AGG | 0.507063 | 4.3:+72326086 | MS.gene48899:CDS |
| CGAAGGTACTAACGATCGAT+TGG | 0.507393 | 4.3:+72326953 | MS.gene48899:CDS |
| CTTCTTCAATGCCAGGGCGT+TGG | 0.511436 | 4.3:-72326079 | None:intergenic |
| TGTTGTGTAGGTTGCGGGAA+GGG | 0.512424 | 4.3:+72324586 | MS.gene48899:intron |
| AATATCAACGCATAGTATGC+TGG | 0.512574 | 4.3:-72327733 | None:intergenic |
| CTAACGATCGATTGGGTCGA+AGG | 0.517986 | 4.3:+72326961 | MS.gene48899:CDS |
| GCTTAACTTCAAGACGATTG+TGG | 0.518649 | 4.3:+72327359 | MS.gene48899:CDS |
| TAGGTCAGGTTTATAAAGCT+CGG | 0.519929 | 4.3:+72326021 | MS.gene48899:CDS |
| TGTTGATATATGGTGGAAGA+AGG | 0.522138 | 4.3:-72323624 | None:intergenic |
| CTCAGACAACTGCTCGAGTA+CGG | 0.524488 | 4.3:+72327066 | MS.gene48899:CDS |
| ATATCATCAGCACGGTCCAT+TGG | 0.525714 | 4.3:-72323840 | None:intergenic |
| TAAAGCTCGGTTGAAGCGGT+CGG | 0.526705 | 4.3:+72326034 | MS.gene48899:CDS |
| TGGGTCAAGGGCTGTCTACT+AGG | 0.529031 | 4.3:+72324753 | MS.gene48899:CDS |
| TAGAGATTTCTCTGCTAAAG+AGG | 0.529315 | 4.3:+72328308 | MS.gene48899:CDS |
| TTGTTGTGTAGGTTGCGGGA+AGG | 0.536381 | 4.3:+72324585 | MS.gene48899:intron |
| CAGGACTCAACAATACCTTC+AGG | 0.537914 | 4.3:-72328344 | None:intergenic |
| TTCCATGCAGATCCTCATCC+TGG | 0.539915 | 4.3:+72327093 | MS.gene48899:CDS |
| CTAGCAGCAGCTATCGGCGA+TGG | 0.540209 | 4.3:-72325996 | None:intergenic |
| CGCCTTTGAATGCATTGAGA+GGG | 0.540213 | 4.3:+72325932 | MS.gene48899:CDS |
| GCACAATTTCCGAAACATAC+CGG | 0.540600 | 4.3:+72328433 | MS.gene48899:CDS |
| CCTAAACTAGCAGCAGCTAT+CGG | 0.540644 | 4.3:-72326002 | None:intergenic |
| TTTATAAAGCTCGGTTGAAG+CGG | 0.541624 | 4.3:+72326030 | MS.gene48899:CDS |
| CATTGAAGAAGCTATAGGAT+TGG | 0.543334 | 4.3:+72326091 | MS.gene48899:CDS |
| GGCCTTACAACCTGTCCTGA+AGG | 0.543439 | 4.3:+72328329 | MS.gene48899:CDS |
| GAGCCATAGCTTCGTAGTCT+CGG | 0.545454 | 4.3:-72327230 | None:intergenic |
| ACCTGAGGCCCGTAAACTTG+GGG | 0.549273 | 4.3:+72329434 | MS.gene48899:CDS |
| GTTTCTAATAAATAAATATG+TGG | 0.549328 | 4.3:+72326139 | MS.gene48899:CDS |
| CTCAACAATACCTTCAGGAC+AGG | 0.549422 | 4.3:-72328339 | None:intergenic |
| GGAATTGAGCCATGAATCCA+TGG | 0.549749 | 4.3:-72323657 | None:intergenic |
| TTGCATTGCCATTGAAGACA+AGG | 0.554912 | 4.3:-72328479 | None:intergenic |
| AGGTCTCTCACTGTTCTGGA+AGG | 0.557957 | 4.3:+72327757 | MS.gene48899:CDS |
| AAATATCACAAAACCTTGAA+GGG | 0.558354 | 4.3:-72323948 | None:intergenic |
| GCCAAAAGATTACCAGGATG+AGG | 0.558707 | 4.3:-72327105 | None:intergenic |
| GAAGGTACTAACGATCGATT+GGG | 0.560592 | 4.3:+72326954 | MS.gene48899:CDS |
| TTCCCTCTCAATGCATTCAA+AGG | 0.562534 | 4.3:-72325934 | None:intergenic |
| AATGGGTTGTTGATATATGG+TGG | 0.573903 | 4.3:-72323631 | None:intergenic |
| ATCAACAACCCATTTCTCCA+TGG | 0.574049 | 4.3:+72323640 | MS.gene48899:CDS |
| CAAGAAGCAATTGAGAGGCA+AGG | 0.576159 | 4.3:+72327000 | MS.gene48899:CDS |
| TAACCGAGACTACGAAGCTA+TGG | 0.578460 | 4.3:+72327227 | MS.gene48899:CDS |
| AAGAAGCAATTGAGAGGCAA+GGG | 0.580778 | 4.3:+72327001 | MS.gene48899:CDS |
| GCGTCCTCGTCAGGAAATGT+TGG | 0.582997 | 4.3:-72325912 | None:intergenic |
| GAAACCCTAAACCTCTAATG+AGG | 0.585397 | 4.3:-72326121 | None:intergenic |
| GGTGTTGCCAAAAGATTACC+AGG | 0.588144 | 4.3:-72327111 | None:intergenic |
| TTGTCCATCTGAGTATCTTG+AGG | 0.589362 | 4.3:+72324784 | MS.gene48899:CDS |
| TATCTTGAAGCAACAAGTTG+AGG | 0.593723 | 4.3:-72323915 | None:intergenic |
| ACGCCTTTGAATGCATTGAG+AGG | 0.599528 | 4.3:+72325931 | MS.gene48899:CDS |
| AACTTCAAGACGATTGTGGA+CGG | 0.600151 | 4.3:+72327363 | MS.gene48899:CDS |
| TTATGATGTCAGAAACTGAA+AGG | 0.603481 | 4.3:+72328511 | MS.gene48899:CDS |
| CTATAGCTTCTTCAATGCCA+GGG | 0.605574 | 4.3:-72326085 | None:intergenic |
| CCTGAGGCCCGTAAACTTGG+GGG | 0.608957 | 4.3:+72329435 | MS.gene48899:CDS |
| AGCTCCTCAAGATACTCAGA+TGG | 0.610256 | 4.3:-72324788 | None:intergenic |
| TGCAGGAGGGACAAAATGCA+AGG | 0.613387 | 4.3:+72326860 | MS.gene48899:intron |
| TATCGGCGATGGAGATATTG+TGG | 0.615296 | 4.3:-72325985 | None:intergenic |
| AAGGTATTGTTGAGTCCTGA+TGG | 0.620888 | 4.3:+72328348 | MS.gene48899:CDS |
| TGTCTTCAATGGCAATGCAA+AGG | 0.625326 | 4.3:+72328482 | MS.gene48899:CDS |
| AGTATCGGTAGCAAAAGAGA+TGG | 0.625690 | 4.3:-72328606 | None:intergenic |
| TTGAAAACCTTCTAGTTCAG+GGG | 0.625717 | 4.3:+72328277 | MS.gene48899:CDS |
| TACCAGGATGAGGATCTGCA+TGG | 0.634417 | 4.3:-72327095 | None:intergenic |
| ATGATCAAGAAGCAATTGAG+AGG | 0.643370 | 4.3:+72326995 | MS.gene48899:CDS |
| TTTGCCAACATTTCCTGACG+AGG | 0.644621 | 4.3:+72325908 | MS.gene48899:CDS |
| CTGAGGCCCGTAAACTTGGG+GGG | 0.652407 | 4.3:+72329436 | MS.gene48899:CDS |
| TTGGGACTATACAAGTGCGA+AGG | 0.655685 | 4.3:+72326936 | MS.gene48899:CDS |
| TGCTGATGATATTCATGCTG+AGG | 0.656845 | 4.3:+72323851 | MS.gene48899:CDS |
| TGATTTGAAAGAGAGTGATG+AGG | 0.668048 | 4.3:-72323694 | None:intergenic |
| CAGCATGAATATCATCAGCA+CGG | 0.670970 | 4.3:-72323848 | None:intergenic |
| GTCCTGATGGTGAAGTTCTG+AGG | 0.671724 | 4.3:+72328361 | MS.gene48899:CDS |
| GCGGTCGGGCAAAGTTGTTG+CGG | 0.688582 | 4.3:+72326049 | MS.gene48899:CDS |
| ACAGGTGCTTCAGCAACCTG+AGG | 0.706045 | 4.3:+72329419 | MS.gene48899:intron |
| GTCTTGGATCTAGTAAACAG+CGG | 0.723373 | 4.3:+72327030 | MS.gene48899:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAAATAATAAATTGTTA+AGG | + | chr4.3:72328127-72328146 | MS.gene48899:intron | 10.0% |
| !!! | ATTATATTAGATTTTTCTTT+TGG | + | chr4.3:72326809-72326828 | MS.gene48899:intron | 10.0% |
| !!! | TGAAATATATTTTTTTTGAA+TGG | + | chr4.3:72329340-72329359 | MS.gene48899:intron | 10.0% |
| !!! | TTATATTAGATTTTTCTTTT+GGG | + | chr4.3:72326810-72326829 | MS.gene48899:intron | 10.0% |
| !! | ACAAAATATATTCACAAAAA+AGG | - | chr4.3:72324043-72324062 | None:intergenic | 15.0% |
| !! | CAAAATATATTCACAAAAAA+GGG | - | chr4.3:72324042-72324061 | None:intergenic | 15.0% |
| !! | GTTTCTAATAAATAAATATG+TGG | + | chr4.3:72326139-72326158 | MS.gene48899:CDS | 15.0% |
| !! | TAAATTGTTAAGGATATTAT+AGG | + | chr4.3:72328137-72328156 | MS.gene48899:intron | 15.0% |
| !! | TTTAAAAATGACAAATAAGT+AGG | - | chr4.3:72328033-72328052 | None:intergenic | 15.0% |
| !!! | AGTAATAAATTGCTATATTT+TGG | - | chr4.3:72328881-72328900 | None:intergenic | 15.0% |
| !!! | TATATTAGATTTTTCTTTTG+GGG | + | chr4.3:72326811-72326830 | MS.gene48899:intron | 15.0% |
| !!! | TCAAAAATTATTTTACATGT+TGG | + | chr4.3:72328760-72328779 | MS.gene48899:intron | 15.0% |
| !!! | TTTTTGTGAATATATTTTGT+GGG | + | chr4.3:72324043-72324062 | MS.gene48899:intron | 15.0% |
| !!! | TTTTTGTGATTATTTTTTGT+GGG | + | chr4.3:72323988-72324007 | MS.gene48899:intron | 15.0% |
| !!! | TTTTTTGTGAATATATTTTG+TGG | + | chr4.3:72324042-72324061 | MS.gene48899:intron | 15.0% |
| !! | AAACAACAAATAAAAAGGAA+TGG | + | chr4.3:72328194-72328213 | MS.gene48899:intron | 20.0% |
| !! | AAGGTTTAAATGTTAATTGA+GGG | - | chr4.3:72328908-72328927 | None:intergenic | 20.0% |
| !! | AATACTGATCACTATTTATA+GGG | + | chr4.3:72326310-72326329 | MS.gene48899:intron | 20.0% |
| !! | AATGTAAAGTGATTTATGTT+TGG | - | chr4.3:72325103-72325122 | None:intergenic | 20.0% |
| !! | ACAAAAGATAATCACAAAAA+AGG | - | chr4.3:72324521-72324540 | None:intergenic | 20.0% |
| !! | ATTTCAGATTGTGTTTAATT+TGG | + | chr4.3:72324610-72324629 | MS.gene48899:CDS | 20.0% |
| !! | CAAAAGATAATCACAAAAAA+GGG | - | chr4.3:72324520-72324539 | None:intergenic | 20.0% |
| !! | CCTTAAAACAACAAATAAAA+AGG | + | chr4.3:72328189-72328208 | MS.gene48899:intron | 20.0% |
| !! | GATGAAAACAAACATAATAA+AGG | - | chr4.3:72325786-72325805 | None:intergenic | 20.0% |
| !! | TCACAAAAAGATTAAAACTT+TGG | - | chr4.3:72323977-72323996 | None:intergenic | 20.0% |
| !! | TCATTATCAAATACAGATTT+CGG | - | chr4.3:72326262-72326281 | None:intergenic | 20.0% |
| !! | TTGTATCAATATCCATTTAA+TGG | + | chr4.3:72327399-72327418 | MS.gene48899:CDS | 20.0% |
| !!! | AAACAATGATGGATTTAAAA+TGG | - | chr4.3:72327936-72327955 | None:intergenic | 20.0% |
| !!! | AAATTTATATCGATTTAGTG+CGG | + | chr4.3:72325341-72325360 | MS.gene48899:intron | 20.0% |
| !!! | AATAAATTGCTATATTTTGG+TGG | - | chr4.3:72328878-72328897 | None:intergenic | 20.0% |
| !!! | ACTATTTGACTATTTCATTT+TGG | + | chr4.3:72325263-72325282 | MS.gene48899:intron | 20.0% |
| !!! | CCTTTTTATTTGTTGTTTTA+AGG | - | chr4.3:72328192-72328211 | None:intergenic | 20.0% |
| !!! | CTATTTGACTATTTCATTTT+GGG | + | chr4.3:72325264-72325283 | MS.gene48899:intron | 20.0% |
| !!! | CTTTTTGTGATTATTTTTTG+TGG | + | chr4.3:72323987-72324006 | MS.gene48899:intron | 20.0% |
| !!! | GTTTTATTCATTAACATACA+AGG | - | chr4.3:72326776-72326795 | None:intergenic | 20.0% |
| !!! | TCAATTCTGATTACTTTTAT+AGG | + | chr4.3:72325364-72325383 | MS.gene48899:intron | 20.0% |
| !!! | TGTGTAATTTTTTGATGTAT+TGG | + | chr4.3:72329095-72329114 | MS.gene48899:intron | 20.0% |
| !!! | TTAATTCTATGTTCTTTTGA+TGG | + | chr4.3:72328834-72328853 | MS.gene48899:intron | 20.0% |
| !!! | TTTCAGATTGTGTTTAATTT+GGG | + | chr4.3:72324611-72324630 | MS.gene48899:CDS | 20.0% |
| !!! | TTTTGAGTTAAACATTTAAG+TGG | - | chr4.3:72328746-72328765 | None:intergenic | 20.0% |
| !!! | TTTTTGTGAATATCTTTTGT+GGG | + | chr4.3:72324463-72324482 | MS.gene48899:intron | 20.0% |
| !!! | TTTTTGTGATTATCTTTTGT+GGG | + | chr4.3:72324521-72324540 | MS.gene48899:intron | 20.0% |
| !!! | TTTTTTGTGATTATCTTTTG+TGG | + | chr4.3:72324520-72324539 | MS.gene48899:intron | 20.0% |
| ! | AAATACACTCATTATATGCT+TGG | - | chr4.3:72326712-72326731 | None:intergenic | 25.0% |
| ! | AAATATCACAAAACCTTGAA+GGG | - | chr4.3:72323951-72323970 | None:intergenic | 25.0% |
| ! | AACAAATAAAAAGGAATGGA+GGG | + | chr4.3:72328198-72328217 | MS.gene48899:intron | 25.0% |
| ! | AACATTATCTCACCATTAAA+TGG | - | chr4.3:72327414-72327433 | None:intergenic | 25.0% |
| ! | AGAAATATATTCACTAAGCT+TGG | + | chr4.3:72324713-72324732 | MS.gene48899:CDS | 25.0% |
| ! | AGACTCAATCCTTAATAAAT+AGG | + | chr4.3:72326339-72326358 | MS.gene48899:intron | 25.0% |
| ! | ATTACATTCAATTACAGTGT+TGG | - | chr4.3:72324351-72324370 | None:intergenic | 25.0% |
| ! | CAAAAAATTACACATTGTCT+GGG | - | chr4.3:72329089-72329108 | None:intergenic | 25.0% |
| ! | CAAATGAAAAGAAAACCAAA+AGG | - | chr4.3:72324841-72324860 | None:intergenic | 25.0% |
| ! | CAATACTGATCACTATTTAT+AGG | + | chr4.3:72326309-72326328 | MS.gene48899:intron | 25.0% |
| ! | CACAGAGTAATTTAAAAACA+TGG | + | chr4.3:72325717-72325736 | MS.gene48899:intron | 25.0% |
| ! | CTCTAATACAGAAAGAAAAT+TGG | - | chr4.3:72327462-72327481 | None:intergenic | 25.0% |
| ! | GAAGGTTTAAATGTTAATTG+AGG | - | chr4.3:72328909-72328928 | None:intergenic | 25.0% |
| ! | GACTCAATCCTTAATAAATA+GGG | + | chr4.3:72326340-72326359 | MS.gene48899:intron | 25.0% |
| ! | GATATTATGCTAGAATATCT+TGG | - | chr4.3:72326462-72326481 | None:intergenic | 25.0% |
| ! | TAAGATTGAAAACTGATCTT+AGG | + | chr4.3:72326429-72326448 | MS.gene48899:intron | 25.0% |
| ! | TACAAAAACAACGGATAAAA+TGG | - | chr4.3:72327997-72328016 | None:intergenic | 25.0% |
| ! | TCAAAAAATTACACATTGTC+TGG | - | chr4.3:72329090-72329109 | None:intergenic | 25.0% |
| ! | TCTAACTTGAACTTAGAATT+TGG | + | chr4.3:72325029-72325048 | MS.gene48899:intron | 25.0% |
| ! | TCTAGAGATTGATTAATGTT+TGG | + | chr4.3:72324906-72324925 | MS.gene48899:intron | 25.0% |
| ! | TGATAGTAGTTTGATACAAA+AGG | + | chr4.3:72326284-72326303 | MS.gene48899:intron | 25.0% |
| ! | TTGAATATAATCACATGTGT+TGG | + | chr4.3:72324150-72324169 | MS.gene48899:intron | 25.0% |
| !! | ATAATTGATTCTGACATGTT+TGG | + | chr4.3:72324968-72324987 | MS.gene48899:intron | 25.0% |
| !! | CAGATTTTCTACAAAAACAA+CGG | - | chr4.3:72328006-72328025 | None:intergenic | 25.0% |
| !! | CTATACATTTTACTGTTTCA+AGG | - | chr4.3:72329217-72329236 | None:intergenic | 25.0% |
| !! | GTTTTTGCTAATATCTTTTG+CGG | + | chr4.3:72324241-72324260 | MS.gene48899:intron | 25.0% |
| !! | GTTTTTGTGAATATCTTTTG+TGG | + | chr4.3:72324462-72324481 | MS.gene48899:intron | 25.0% |
| !! | TGTAACTTTTGCAAAAATCA+TGG | + | chr4.3:72325492-72325511 | MS.gene48899:intron | 25.0% |
| !! | TTTTTGCAAAAGTTACACTT+TGG | - | chr4.3:72325489-72325508 | None:intergenic | 25.0% |
| !!! | AAACTTGCTTTTCTTGATTT+CGG | + | chr4.3:72327141-72327160 | MS.gene48899:CDS | 25.0% |
| !!! | AGTATTGAATTCTTACCTTT+TGG | + | chr4.3:72324823-72324842 | MS.gene48899:intron | 25.0% |
| !!! | GATTGAATGTTAATTTTGAC+AGG | + | chr4.3:72326833-72326852 | MS.gene48899:intron | 25.0% |
| !!! | TGTTTAATTTGGGTTCATTT+GGG | + | chr4.3:72324621-72324640 | MS.gene48899:CDS | 25.0% |
| !!! | TGTTTTAAGGTTATTTACAC+CGG | - | chr4.3:72328179-72328198 | None:intergenic | 25.0% |
| AAACAACGGATAAAATGGAA+AGG | - | chr4.3:72327992-72328011 | None:intergenic | 30.0% | |
| ACATCAGTGACAAATTTCAA+TGG | - | chr4.3:72325829-72325848 | None:intergenic | 30.0% | |
| ACGAAACTGTGAATTCAATA+AGG | - | chr4.3:72323730-72323749 | None:intergenic | 30.0% | |
| ATAAATATTGAACCCTGTTC+TGG | + | chr4.3:72326526-72326545 | MS.gene48899:intron | 30.0% | |
| ATGCTCTTGATTTCTTATCT+AGG | + | chr4.3:72327262-72327281 | MS.gene48899:CDS | 30.0% | |
| CAAAAAATTGTATGCTGACA+AGG | + | chr4.3:72326888-72326907 | MS.gene48899:CDS | 30.0% | |
| CAAAAACAACATCTACATAG+TGG | + | chr4.3:72329523-72329542 | MS.gene48899:CDS | 30.0% | |
| CAAAGAATCGTATTATACAC+AGG | + | chr4.3:72329401-72329420 | MS.gene48899:intron | 30.0% | |
| CAACAAATAAAAAGGAATGG+AGG | + | chr4.3:72328197-72328216 | MS.gene48899:intron | 30.0% | |
| CAATTGTGTCCTTAGTTAAA+AGG | + | chr4.3:72329010-72329029 | MS.gene48899:intron | 30.0% | |
| CACTAATACAGATATAGACA+CGG | + | chr4.3:72327502-72327521 | MS.gene48899:intron | 30.0% | |
| CATATCTTAGATGATCTCTT+CGG | - | chr4.3:72326408-72326427 | None:intergenic | 30.0% | |
| CCTGATTTCCCTATTTATTA+AGG | - | chr4.3:72326351-72326370 | None:intergenic | 30.0% | |
| CCTTAATAAATAGGGAAATC+AGG | + | chr4.3:72326348-72326367 | MS.gene48899:intron | 30.0% | |
| CTACACAACAAAACCAAAAA+CGG | - | chr4.3:72324576-72324595 | None:intergenic | 30.0% | |
| GAAATATCACAAAACCTTGA+AGG | - | chr4.3:72323952-72323971 | None:intergenic | 30.0% | |
| GCTTCAAATTTGTGAATGTT+TGG | - | chr4.3:72325553-72325572 | None:intergenic | 30.0% | |
| GGATATGTTCAAGTAAAAGT+AGG | - | chr4.3:72325082-72325101 | None:intergenic | 30.0% | |
| TATCTGTATTAGTGCTTCAT+AGG | - | chr4.3:72327496-72327515 | None:intergenic | 30.0% | |
| TCAACAAGTTCAAACAATGA+TGG | - | chr4.3:72327947-72327966 | None:intergenic | 30.0% | |
| TGATGTAGTGTTGTCAATTA+TGG | + | chr4.3:72325760-72325779 | MS.gene48899:intron | 30.0% | |
| TGCTCTTGATTTCTTATCTA+GGG | + | chr4.3:72327263-72327282 | MS.gene48899:CDS | 30.0% | |
| TTATCAACATCACCTAAAGA+TGG | + | chr4.3:72323795-72323814 | MS.gene48899:CDS | 30.0% | |
| TTATGATGTCAGAAACTGAA+AGG | + | chr4.3:72328511-72328530 | MS.gene48899:CDS | 30.0% | |
| TTGAATGTAATCACATGTGT+TGG | + | chr4.3:72324360-72324379 | MS.gene48899:intron | 30.0% | |
| TTTGTGAATGTTTGGATTCA+AGG | - | chr4.3:72325545-72325564 | None:intergenic | 30.0% | |
| ! | ACATTCACAAATTTGAAGCA+TGG | + | chr4.3:72325554-72325573 | MS.gene48899:intron | 30.0% |
| ! | AGAAGCCTTTTAGCAAAATA+GGG | - | chr4.3:72327832-72327851 | None:intergenic | 30.0% |
| ! | ATATGCTGATCCCAATTTTA+AGG | + | chr4.3:72327789-72327808 | MS.gene48899:CDS | 30.0% |
| ! | CATACTATGCGTTGATATTA+AGG | + | chr4.3:72327737-72327756 | MS.gene48899:CDS | 30.0% |
| ! | CATATCCCTATTTTGCTAAA+AGG | + | chr4.3:72327824-72327843 | MS.gene48899:CDS | 30.0% |
| ! | CTTTTTCTTACCTGTAGTAT+CGG | - | chr4.3:72328624-72328643 | None:intergenic | 30.0% |
| ! | TAGAAGCCTTTTAGCAAAAT+AGG | - | chr4.3:72327833-72327852 | None:intergenic | 30.0% |
| ! | TAGGTTGAATAGTAAATTCG+AGG | - | chr4.3:72325063-72325082 | None:intergenic | 30.0% |
| ! | TTCAAGTTAGAACCAATTCA+GGG | - | chr4.3:72325020-72325039 | None:intergenic | 30.0% |
| ! | TTTAGAGCATATAGTTGACT+TGG | + | chr4.3:72329289-72329308 | MS.gene48899:intron | 30.0% |
| ! | TTTTGCTAAAAGGCTTCTAA+CGG | + | chr4.3:72327834-72327853 | MS.gene48899:CDS | 30.0% |
| !! | AACTTGCTTTTCTTGATTTC+GGG | + | chr4.3:72327142-72327161 | MS.gene48899:CDS | 30.0% |
| !! | ACTATTTCATTTTGGGTGTT+TGG | + | chr4.3:72325271-72325290 | MS.gene48899:intron | 30.0% |
| !! | AGAAATGGGTTGTTGATATA+TGG | - | chr4.3:72323637-72323656 | None:intergenic | 30.0% |
| !! | GTGTTTAATTTGGGTTCATT+TGG | + | chr4.3:72324620-72324639 | MS.gene48899:CDS | 30.0% |
| !! | TTAATGTTTGGTTCCACTTT+TGG | + | chr4.3:72324918-72324937 | MS.gene48899:intron | 30.0% |
| !! | TTACCTTCAATCTGAAGTTT+TGG | + | chr4.3:72328698-72328717 | MS.gene48899:intron | 30.0% |
| !!! | ATGGTTTTAAATTGCGGTTA+CGG | + | chr4.3:72325573-72325592 | MS.gene48899:intron | 30.0% |
| !!! | CTTAGTTCCTGATGTTTTTT+GGG | + | chr4.3:72326918-72326937 | MS.gene48899:CDS | 30.0% |
| !!! | GTGATTATTTTTTGTGGGTT+TGG | + | chr4.3:72323993-72324012 | MS.gene48899:intron | 30.0% |
| !!! | TCTTAGTTCCTGATGTTTTT+TGG | + | chr4.3:72326917-72326936 | MS.gene48899:CDS | 30.0% |
| !!! | TGAAGCATGGTTTTAAATTG+CGG | + | chr4.3:72325567-72325586 | MS.gene48899:intron | 30.0% |
| AACGGATAAAATGGAAAGGA+GGG | - | chr4.3:72327988-72328007 | None:intergenic | 35.0% | |
| AATATCAACGCATAGTATGC+TGG | - | chr4.3:72327736-72327755 | None:intergenic | 35.0% | |
| AGAGTTTGACCAAATTACAG+TGG | + | chr4.3:72325442-72325461 | MS.gene48899:intron | 35.0% | |
| AGCTGATATGGTCTAAATTG+CGG | + | chr4.3:72325639-72325658 | MS.gene48899:intron | 35.0% | |
| AGGAAAAAGACCAATAACTC+CGG | + | chr4.3:72328157-72328176 | MS.gene48899:intron | 35.0% | |
| ATCAGAATCTGCAAGAAAGT+TGG | - | chr4.3:72327668-72327687 | None:intergenic | 35.0% | |
| ATGATCAAGAAGCAATTGAG+AGG | + | chr4.3:72326995-72327014 | MS.gene48899:CDS | 35.0% | |
| ATGTTAGTGTTGTATCTGTG+TGG | + | chr4.3:72327567-72327586 | MS.gene48899:intron | 35.0% | |
| CATTATAAAGACGCCTCATT+GGG | - | chr4.3:72326573-72326592 | None:intergenic | 35.0% | |
| CATTGAAGAAGCTATAGGAT+TGG | + | chr4.3:72326091-72326110 | MS.gene48899:CDS | 35.0% | |
| CGCTTTCTTATGCAATTACT+TGG | + | chr4.3:72329495-72329514 | MS.gene48899:CDS | 35.0% | |
| GAAACTGAACTTTGTGATGA+TGG | - | chr4.3:72323774-72323793 | None:intergenic | 35.0% | |
| GAAGCGAGATTTGCAATAAT+TGG | + | chr4.3:72327186-72327205 | MS.gene48899:CDS | 35.0% | |
| GAGATCAAGTGATTAGGATA+TGG | + | chr4.3:72328553-72328572 | MS.gene48899:CDS | 35.0% | |
| GAGTTGCTGATCAGAATAAA+AGG | + | chr4.3:72324672-72324691 | MS.gene48899:CDS | 35.0% | |
| GCATCTCTTAGATATGGATT+TGG | - | chr4.3:72327862-72327881 | None:intergenic | 35.0% | |
| GTAAAGCACACAAATGATCA+AGG | - | chr4.3:72325874-72325893 | None:intergenic | 35.0% | |
| GTATAGTCCCAAAAAACATC+AGG | - | chr4.3:72326928-72326947 | None:intergenic | 35.0% | |
| GTTATTTACACCGGAGTTAT+TGG | - | chr4.3:72328170-72328189 | None:intergenic | 35.0% | |
| TAACTAAGGACACAATTGTG+AGG | - | chr4.3:72329008-72329027 | None:intergenic | 35.0% | |
| TACTCAGATGGACAAATATC+AGG | - | chr4.3:72324779-72324798 | None:intergenic | 35.0% | |
| TAGAGATTTCTCTGCTAAAG+AGG | + | chr4.3:72328308-72328327 | MS.gene48899:CDS | 35.0% | |
| TAGGTCAGGTTTATAAAGCT+CGG | + | chr4.3:72326021-72326040 | MS.gene48899:CDS | 35.0% | |
| TATCTTGAAGCAACAAGTTG+AGG | - | chr4.3:72323918-72323937 | None:intergenic | 35.0% | |
| TCAAAAAAGTTTCGAAGTGC+AGG | - | chr4.3:72327312-72327331 | None:intergenic | 35.0% | |
| TCAAAAAGTCAGGAACATAC+CGG | - | chr4.3:72328455-72328474 | None:intergenic | 35.0% | |
| TCAAGAGCTTAATTATGTGC+AGG | + | chr4.3:72326217-72326236 | MS.gene48899:CDS | 35.0% | |
| TCAGAATCTGCAAGAAAGTT+GGG | - | chr4.3:72327667-72327686 | None:intergenic | 35.0% | |
| TCAGTTTCTGACATCATAAG+TGG | - | chr4.3:72328510-72328529 | None:intergenic | 35.0% | |
| TCTACCTCATTAGAGGTTTA+GGG | + | chr4.3:72326117-72326136 | MS.gene48899:CDS | 35.0% | |
| TGACCCAATTTGACAAAAGT+TGG | - | chr4.3:72324740-72324759 | None:intergenic | 35.0% | |
| TGATGAGGTGAGATTTGAAA+TGG | - | chr4.3:72323682-72323701 | None:intergenic | 35.0% | |
| TGATTTGAAAGAGAGTGATG+AGG | - | chr4.3:72323697-72323716 | None:intergenic | 35.0% | |
| TTCTACCTCATTAGAGGTTT+AGG | + | chr4.3:72326116-72326135 | MS.gene48899:CDS | 35.0% | |
| TTGAGGTCAAAACACAACAT+TGG | - | chr4.3:72328933-72328952 | None:intergenic | 35.0% | |
| TTTATAAAGCTCGGTTGAAG+CGG | + | chr4.3:72326030-72326049 | MS.gene48899:CDS | 35.0% | |
| ! | AAATTTGCTTCCTCCAAAAG+TGG | - | chr4.3:72324934-72324953 | None:intergenic | 35.0% |
| ! | ACACCTTCAATCTAAAGTGT+CGG | + | chr4.3:72327593-72327612 | MS.gene48899:intron | 35.0% |
| ! | ACTTTTGTCAAATTGGGTCA+AGG | + | chr4.3:72324740-72324759 | MS.gene48899:CDS | 35.0% |
| ! | ATCAGAGCATCTCTTAGATA+TGG | - | chr4.3:72327868-72327887 | None:intergenic | 35.0% |
| ! | ATCATAGTGCCACTGTAATT+TGG | - | chr4.3:72325454-72325473 | None:intergenic | 35.0% |
| ! | CTTTTGTCAAATTGGGTCAA+GGG | + | chr4.3:72324741-72324760 | MS.gene48899:CDS | 35.0% |
| ! | GATGAGGTGAGATTTGAAAT+GGG | - | chr4.3:72323681-72323700 | None:intergenic | 35.0% |
| ! | GGACCAACTTTTGTCAAATT+GGG | + | chr4.3:72324734-72324753 | MS.gene48899:CDS | 35.0% |
| ! | GTTCAAGTTAGAACCAATTC+AGG | - | chr4.3:72325021-72325040 | None:intergenic | 35.0% |
| ! | TGCATTTTGCCGCAATATAA+AGG | - | chr4.3:72325610-72325629 | None:intergenic | 35.0% |
| ! | TGGACCAACTTTTGTCAAAT+TGG | + | chr4.3:72324733-72324752 | MS.gene48899:CDS | 35.0% |
| ! | TGTTGATATATGGTGGAAGA+AGG | - | chr4.3:72323627-72323646 | None:intergenic | 35.0% |
| !! | AACTGATTTTGTCCCTGAAT+TGG | + | chr4.3:72325005-72325024 | MS.gene48899:intron | 35.0% |
| !! | AATGGGTTGTTGATATATGG+TGG | - | chr4.3:72323634-72323653 | None:intergenic | 35.0% |
| !! | ATATGGTTCTAAACCCTTCA+AGG | + | chr4.3:72323935-72323954 | MS.gene48899:CDS | 35.0% |
| !! | CAACTTGTTGCTTCAAGATA+TGG | + | chr4.3:72323918-72323937 | MS.gene48899:CDS | 35.0% |
| !! | CTTGAAAACCTTCTAGTTCA+GGG | + | chr4.3:72328276-72328295 | MS.gene48899:CDS | 35.0% |
| !! | GAATTGTGTTGATCCGTTTT+TGG | + | chr4.3:72324560-72324579 | MS.gene48899:intron | 35.0% |
| !! | GTATCTGAAGCTTTTACTCT+CGG | + | chr4.3:72328411-72328430 | MS.gene48899:CDS | 35.0% |
| !! | TATGTGCAGGTTAGTTCTTT+TGG | + | chr4.3:72326230-72326249 | MS.gene48899:intron | 35.0% |
| !! | TTGAAAACCTTCTAGTTCAG+GGG | + | chr4.3:72328277-72328296 | MS.gene48899:CDS | 35.0% |
| !!! | ATTTGGGTTGAAGCTTTTGT+GGG | + | chr4.3:72324637-72324656 | MS.gene48899:CDS | 35.0% |
| !!! | CGTTTTTGGTTTTGTTGTGT+AGG | + | chr4.3:72324574-72324593 | MS.gene48899:intron | 35.0% |
| !!! | TCTGATTGAGTTGCTTTTCA+AGG | + | chr4.3:72327882-72327901 | MS.gene48899:CDS | 35.0% |
| !!! | TGATTTTTTTCCGATGCAGA+TGG | + | chr4.3:72328247-72328266 | MS.gene48899:intron | 35.0% |
| AAACTTGAGCAAAGCTGCAA+AGG | - | chr4.3:72326680-72326699 | None:intergenic | 40.0% | |
| AACTTCAAGACGATTGTGGA+CGG | + | chr4.3:72327363-72327382 | MS.gene48899:CDS | 40.0% | |
| AACTTGAGCAAAGCTGCAAA+GGG | - | chr4.3:72326679-72326698 | None:intergenic | 40.0% | |
| AAGAAGCAATTGAGAGGCAA+GGG | + | chr4.3:72327001-72327020 | MS.gene48899:CDS | 40.0% | |
| ACAAGGTTCCTCAAAAAGTC+AGG | - | chr4.3:72328465-72328484 | None:intergenic | 40.0% | |
| ACATGCACGAAATAGTCAAC+AGG | - | chr4.3:72325404-72325423 | None:intergenic | 40.0% | |
| ACCTAAAGATGGTTCCCTTA+AGG | + | chr4.3:72323806-72323825 | MS.gene48899:CDS | 40.0% | |
| AGCTCAGAGATCAAGTGATT+AGG | + | chr4.3:72328547-72328566 | MS.gene48899:CDS | 40.0% | |
| AGGAACATACCGGTATGTTT+CGG | - | chr4.3:72328445-72328464 | None:intergenic | 40.0% | |
| ATCAACAACCCATTTCTCCA+TGG | + | chr4.3:72323640-72323659 | MS.gene48899:CDS | 40.0% | |
| ATGCCGTGACCTTTATATTG+CGG | + | chr4.3:72325598-72325617 | MS.gene48899:intron | 40.0% | |
| ATTAAGGTCTCTCACTGTTC+TGG | + | chr4.3:72327753-72327772 | MS.gene48899:CDS | 40.0% | |
| ATTGCAAATCTCGCTTCTTC+TGG | - | chr4.3:72327183-72327202 | None:intergenic | 40.0% | |
| ATTTGGTCAAACTCTCCTTG+AGG | - | chr4.3:72325437-72325456 | None:intergenic | 40.0% | |
| CAACGGATAAAATGGAAAGG+AGG | - | chr4.3:72327989-72328008 | None:intergenic | 40.0% | |
| CAGCATGAATATCATCAGCA+CGG | - | chr4.3:72323851-72323870 | None:intergenic | 40.0% | |
| CATAAGTGTCTGTGCTACAA+AGG | + | chr4.3:72324431-72324450 | MS.gene48899:intron | 40.0% | |
| CCATGAATCCATGGAGAAAT+GGG | - | chr4.3:72323651-72323670 | None:intergenic | 40.0% | |
| CCATTATAAAGACGCCTCAT+TGG | - | chr4.3:72326574-72326593 | None:intergenic | 40.0% | |
| CTATAGCTTCTTCAATGCCA+GGG | - | chr4.3:72326088-72326107 | None:intergenic | 40.0% | |
| CTCAAAGCTAAGTGTGTGTT+TGG | - | chr4.3:72325181-72325200 | None:intergenic | 40.0% | |
| CTTTAGCTGTAAGTCGTTCA+CGG | - | chr4.3:72326603-72326622 | None:intergenic | 40.0% | |
| GAAACCCTAAACCTCTAATG+AGG | - | chr4.3:72326124-72326143 | None:intergenic | 40.0% | |
| GAATGCATTGAGAGGGAATT+AGG | + | chr4.3:72325939-72325958 | MS.gene48899:CDS | 40.0% | |
| GCACAATTTCCGAAACATAC+CGG | + | chr4.3:72328433-72328452 | MS.gene48899:CDS | 40.0% | |
| GCACCAAAACTTCAGATTGA+AGG | - | chr4.3:72328704-72328723 | None:intergenic | 40.0% | |
| GCAGAAAAATGCAGCTGATA+TGG | + | chr4.3:72325627-72325646 | MS.gene48899:intron | 40.0% | |
| GCAGCAAGCACCTTAAAATT+GGG | - | chr4.3:72327802-72327821 | None:intergenic | 40.0% | |
| GCTTAACTTCAAGACGATTG+TGG | + | chr4.3:72327359-72327378 | MS.gene48899:CDS | 40.0% | |
| GGTAAAGACACAAGACAGAA+CGG | - | chr4.3:72328683-72328702 | None:intergenic | 40.0% | |
| GTCTTGGATCTAGTAAACAG+CGG | + | chr4.3:72327030-72327049 | MS.gene48899:CDS | 40.0% | |
| TAATCACATGTGTTGGACAC+TGG | + | chr4.3:72324157-72324176 | MS.gene48899:intron | 40.0% | |
| TACAACTATGACCGCAATAC+AGG | - | chr4.3:72325693-72325712 | None:intergenic | 40.0% | |
| TCAAAACACAACATTGGCGA+AGG | - | chr4.3:72328927-72328946 | None:intergenic | 40.0% | |
| TGAACGACTTACAGCTAAAG+CGG | + | chr4.3:72326603-72326622 | MS.gene48899:intron | 40.0% | |
| TGCAGCAAGCACCTTAAAAT+TGG | - | chr4.3:72327803-72327822 | None:intergenic | 40.0% | |
| TGCTGATGATATTCATGCTG+AGG | + | chr4.3:72323851-72323870 | MS.gene48899:CDS | 40.0% | |
| TGTCTTCAATGGCAATGCAA+AGG | + | chr4.3:72328482-72328501 | MS.gene48899:CDS | 40.0% | |
| TTCCCTCTCAATGCATTCAA+AGG | - | chr4.3:72325937-72325956 | None:intergenic | 40.0% | |
| TTGAGGAACCTTGTCTTCAA+TGG | + | chr4.3:72328471-72328490 | MS.gene48899:CDS | 40.0% | |
| TTGCATTGCCATTGAAGACA+AGG | - | chr4.3:72328482-72328501 | None:intergenic | 40.0% | |
| TTGCCGCAATATAAAGGTCA+CGG | - | chr4.3:72325604-72325623 | None:intergenic | 40.0% | |
| TTGGACTTCTACCTCATTAG+AGG | + | chr4.3:72326110-72326129 | MS.gene48899:CDS | 40.0% | |
| TTGTCCATCTGAGTATCTTG+AGG | + | chr4.3:72324784-72324803 | MS.gene48899:CDS | 40.0% | |
| TTGTGTGCTTTACCTTTACC+AGG | + | chr4.3:72325881-72325900 | MS.gene48899:intron | 40.0% | |
| TTTCGAAGTGCAGGAACAAT+TGG | - | chr4.3:72327303-72327322 | None:intergenic | 40.0% | |
| TTTCGAGGATTGTGTACTTC+AGG | + | chr4.3:72328969-72328988 | MS.gene48899:intron | 40.0% | |
| ! | AATCTTTTGGCAACACCAGA+GGG | + | chr4.3:72327117-72327136 | MS.gene48899:CDS | 40.0% |
| ! | AGAAAAGCAAGTTTTCCCTC+TGG | - | chr4.3:72327135-72327154 | None:intergenic | 40.0% |
| ! | CATGTGATTTTCTTGCCTCA+AGG | + | chr4.3:72325419-72325438 | MS.gene48899:intron | 40.0% |
| ! | CCAATGAGGCGTCTTTATAA+TGG | + | chr4.3:72326571-72326590 | MS.gene48899:intron | 40.0% |
| ! | GGTATGTTCCTGACTTTTTG+AGG | + | chr4.3:72328454-72328473 | MS.gene48899:CDS | 40.0% |
| ! | GTAAGTGTTGTACCAGAACA+GGG | - | chr4.3:72326541-72326560 | None:intergenic | 40.0% |
| ! | TAATCTTTTGGCAACACCAG+AGG | + | chr4.3:72327116-72327135 | MS.gene48899:CDS | 40.0% |
| ! | TCCTCATCCTGGTAATCTTT+TGG | + | chr4.3:72327104-72327123 | MS.gene48899:CDS | 40.0% |
| ! | TCTTTTGCTACCGATACTAC+AGG | + | chr4.3:72328611-72328630 | MS.gene48899:CDS | 40.0% |
| ! | TGTAAGTGTTGTACCAGAAC+AGG | - | chr4.3:72326542-72326561 | None:intergenic | 40.0% |
| ! | TTTTCCGATGCAGATGGAAT+AGG | + | chr4.3:72328253-72328272 | MS.gene48899:intron | 40.0% |
| !! | AAGGTATTGTTGAGTCCTGA+TGG | + | chr4.3:72328348-72328367 | MS.gene48899:CDS | 40.0% |
| !! | AGTATCGGTAGCAAAAGAGA+TGG | - | chr4.3:72328609-72328628 | None:intergenic | 40.0% |
| !! | ATGTTTGGTTCCACTTTTGG+AGG | + | chr4.3:72324921-72324940 | MS.gene48899:intron | 40.0% |
| !! | GAAGGTACTAACGATCGATT+GGG | + | chr4.3:72326954-72326973 | MS.gene48899:CDS | 40.0% |
| !! | GCTTGAAAACCTTCTAGTTC+AGG | + | chr4.3:72328275-72328294 | MS.gene48899:CDS | 40.0% |
| !! | TAATTTTGACAGGTTCCTGC+AGG | + | chr4.3:72326843-72326862 | MS.gene48899:intron | 40.0% |
| !! | TCCTTAGTTAAAAGGCGCTT+CGG | + | chr4.3:72329018-72329037 | MS.gene48899:intron | 40.0% |
| !!! | CATTTGGGTTGAAGCTTTTG+TGG | + | chr4.3:72324636-72324655 | MS.gene48899:CDS | 40.0% |
| !!! | TGGTTTTGTTGTGTAGGTTG+CGG | + | chr4.3:72324580-72324599 | MS.gene48899:intron | 40.0% |
| AAAGCAGTGCAGCAAACTTG+AGG | - | chr4.3:72328950-72328969 | None:intergenic | 45.0% | |
| ACAGTGTCAGTGTGTGAACA+TGG | - | chr4.3:72324128-72324147 | None:intergenic | 45.0% | |
| ACATGTGTTGGACACTGACA+CGG | + | chr4.3:72324162-72324181 | MS.gene48899:intron | 45.0% | |
| ACGCCTTTGAATGCATTGAG+AGG | + | chr4.3:72325931-72325950 | MS.gene48899:CDS | 45.0% | |
| AGACCTCATCTCCTGTATTG+CGG | + | chr4.3:72325679-72325698 | MS.gene48899:intron | 45.0% | |
| AGCTAAAGCGGACAATACCT+CGG | + | chr4.3:72326615-72326634 | MS.gene48899:intron | 45.0% | |
| AGCTCCTCAAGATACTCAGA+TGG | - | chr4.3:72324791-72324810 | None:intergenic | 45.0% | |
| ATATCATCAGCACGGTCCAT+TGG | - | chr4.3:72323843-72323862 | None:intergenic | 45.0% | |
| ATCCTTACTGATCCGGACAA+GGG | - | chr4.3:72329192-72329211 | None:intergenic | 45.0% | |
| ATGCTGGAACTGCAAACAGA+TGG | - | chr4.3:72327720-72327739 | None:intergenic | 45.0% | |
| CAAGAAGCAATTGAGAGGCA+AGG | + | chr4.3:72327000-72327019 | MS.gene48899:CDS | 45.0% | |
| CAAGCCTATTCCATCTGCAT+CGG | - | chr4.3:72328260-72328279 | None:intergenic | 45.0% | |
| CAAGGTCATCCTTACTGATC+CGG | - | chr4.3:72329199-72329218 | None:intergenic | 45.0% | |
| CAGGACTCAACAATACCTTC+AGG | - | chr4.3:72328347-72328366 | None:intergenic | 45.0% | |
| CATAAGTGTCTGTGCTACAG+AGG | + | chr4.3:72324210-72324229 | MS.gene48899:intron | 45.0% | |
| CCCATTTCTCCATGGATTCA+TGG | + | chr4.3:72323648-72323667 | MS.gene48899:CDS | 45.0% | |
| CCTAAACTAGCAGCAGCTAT+CGG | - | chr4.3:72326005-72326024 | None:intergenic | 45.0% | |
| CCTATAGCTTCTTCAATGCC+AGG | - | chr4.3:72326089-72326108 | None:intergenic | 45.0% | |
| CGCCTTTGAATGCATTGAGA+GGG | + | chr4.3:72325932-72325951 | MS.gene48899:CDS | 45.0% | |
| CTCAACAATACCTTCAGGAC+AGG | - | chr4.3:72328342-72328361 | None:intergenic | 45.0% | |
| GAAATGTTGGCAAACCATCC+TGG | - | chr4.3:72325902-72325921 | None:intergenic | 45.0% | |
| GCCAAAAGATTACCAGGATG+AGG | - | chr4.3:72327108-72327127 | None:intergenic | 45.0% | |
| GCCATGAATCCATGGAGAAA+TGG | - | chr4.3:72323652-72323671 | None:intergenic | 45.0% | |
| GCCTTAAGGGAACCATCTTT+AGG | - | chr4.3:72323810-72323829 | None:intergenic | 45.0% | |
| GGAATTGAGCCATGAATCCA+TGG | - | chr4.3:72323660-72323679 | None:intergenic | 45.0% | |
| GTATTGGAACAGTATCCCTG+CGG | + | chr4.3:72329111-72329130 | MS.gene48899:intron | 45.0% | |
| GTGCTTTACCTTTACCAGGA+TGG | + | chr4.3:72325885-72325904 | MS.gene48899:intron | 45.0% | |
| GTTTGGATTCAAGGTGAGCT+TGG | - | chr4.3:72325536-72325555 | None:intergenic | 45.0% | |
| TAACCGAGACTACGAAGCTA+TGG | + | chr4.3:72327227-72327246 | MS.gene48899:CDS | 45.0% | |
| TAAGGCTCTTGCACTTCCAA+TGG | + | chr4.3:72323824-72323843 | MS.gene48899:CDS | 45.0% | |
| TACCTTCAGGACAGGTTGTA+AGG | - | chr4.3:72328334-72328353 | None:intergenic | 45.0% | |
| TATCGGCGATGGAGATATTG+TGG | - | chr4.3:72325988-72326007 | None:intergenic | 45.0% | |
| TCATGCTGAGGCAAAAGCTT+TGG | + | chr4.3:72323863-72323882 | MS.gene48899:CDS | 45.0% | |
| TGGTGTGTGAACATCGTATC+TGG | - | chr4.3:72324331-72324350 | None:intergenic | 45.0% | |
| TTACACTCCTCAACCCAATG+AGG | + | chr4.3:72326557-72326576 | MS.gene48899:intron | 45.0% | |
| TTCCTCAGAACTTCACCATC+AGG | - | chr4.3:72328366-72328385 | None:intergenic | 45.0% | |
| TTGGCAAACCATCCTGGTAA+AGG | - | chr4.3:72325896-72325915 | None:intergenic | 45.0% | |
| TTGGGACTATACAAGTGCGA+AGG | + | chr4.3:72326936-72326955 | MS.gene48899:CDS | 45.0% | |
| TTGTCTGGGAAACGAGTCTA+AGG | - | chr4.3:72329075-72329094 | None:intergenic | 45.0% | |
| TTTGCCAACATTTCCTGACG+AGG | + | chr4.3:72325908-72325927 | MS.gene48899:CDS | 45.0% | |
| ! | CCTGGCATTGAAGAAGCTAT+AGG | + | chr4.3:72326086-72326105 | MS.gene48899:CDS | 45.0% |
| ! | CTTTTCTCCCCTGAACTAGA+AGG | - | chr4.3:72328287-72328306 | None:intergenic | 45.0% |
| ! | CTTTTGTGGGAGCAGAGAAA+TGG | + | chr4.3:72324650-72324669 | MS.gene48899:CDS | 45.0% |
| ! | GCACCGACACTTTAGATTGA+AGG | - | chr4.3:72327599-72327618 | None:intergenic | 45.0% |
| ! | GGTGTTGCCAAAAGATTACC+AGG | - | chr4.3:72327114-72327133 | None:intergenic | 45.0% |
| ! | TGGAAGTGCAAGAGCCTTAA+GGG | - | chr4.3:72323823-72323842 | None:intergenic | 45.0% |
| ! | TTGGAAGTGCAAGAGCCTTA+AGG | - | chr4.3:72323824-72323843 | None:intergenic | 45.0% |
| !! | AAAATCATGGTGTCACACCG+TGG | + | chr4.3:72325505-72325524 | MS.gene48899:intron | 45.0% |
| !! | ACCGAAGCGCCTTTTAACTA+AGG | - | chr4.3:72329022-72329041 | None:intergenic | 45.0% |
| !! | CGAAGGTACTAACGATCGAT+TGG | + | chr4.3:72326953-72326972 | MS.gene48899:CDS | 45.0% |
| !! | TAGTTAAAAGGCGCTTCGGT+GGG | + | chr4.3:72329022-72329041 | MS.gene48899:intron | 45.0% |
| !! | TTAGTTAAAAGGCGCTTCGG+TGG | + | chr4.3:72329021-72329040 | MS.gene48899:intron | 45.0% |
| !! | TTCACAGTTTCGTGCTGCTT+TGG | + | chr4.3:72323737-72323756 | MS.gene48899:CDS | 45.0% |
| !!! | GGTTTTGTTGTGTAGGTTGC+GGG | + | chr4.3:72324581-72324600 | MS.gene48899:intron | 45.0% |
| !!! | TTTGCTGCACTGCTTTTTCG+AGG | + | chr4.3:72328954-72328973 | MS.gene48899:intron | 45.0% |
| AACCTGAGGCCCGTAAACTT+GGG | + | chr4.3:72329433-72329452 | MS.gene48899:CDS | 50.0% | |
| AAGACGATTGTGGACGGTCT+CGG | + | chr4.3:72327369-72327388 | MS.gene48899:CDS | 50.0% | |
| ACATGTGTTGGACACTGGCA+TGG | + | chr4.3:72324372-72324391 | MS.gene48899:intron | 50.0% | |
| AGGAGATGAGGTCTCCACAA+CGG | - | chr4.3:72325673-72325692 | None:intergenic | 50.0% | |
| CATCCTTACTGATCCGGACA+AGG | - | chr4.3:72329193-72329212 | None:intergenic | 50.0% | |
| CGATGCTGACATTGACACAC+AGG | + | chr4.3:72327528-72327547 | MS.gene48899:intron | 50.0% | |
| CTAACGATCGATTGGGTCGA+AGG | + | chr4.3:72326961-72326980 | MS.gene48899:CDS | 50.0% | |
| CTCAGACAACTGCTCGAGTA+CGG | + | chr4.3:72327066-72327085 | MS.gene48899:CDS | 50.0% | |
| GAGCCATAGCTTCGTAGTCT+CGG | - | chr4.3:72327233-72327252 | None:intergenic | 50.0% | |
| GAGGCTAAGGAGTTAGAGGA+TGG | + | chr4.3:72329136-72329155 | MS.gene48899:intron | 50.0% | |
| TAAAGCTCGGTTGAAGCGGT+CGG | + | chr4.3:72326034-72326053 | MS.gene48899:CDS | 50.0% | |
| TACCAGGATGAGGATCTGCA+TGG | - | chr4.3:72327098-72327117 | None:intergenic | 50.0% | |
| TCCTTACTGATCCGGACAAG+GGG | - | chr4.3:72329191-72329210 | None:intergenic | 50.0% | |
| TGACCGCAATACAGGAGATG+AGG | - | chr4.3:72325685-72325704 | None:intergenic | 50.0% | |
| TGCAGGAGGGACAAAATGCA+AGG | + | chr4.3:72326860-72326879 | MS.gene48899:intron | 50.0% | |
| TGTTGGACACTGACACGGAT+AGG | + | chr4.3:72324167-72324186 | MS.gene48899:intron | 50.0% | |
| TGTTGTGTAGGTTGCGGGAA+GGG | + | chr4.3:72324586-72324605 | MS.gene48899:intron | 50.0% | |
| TTCCATGCAGATCCTCATCC+TGG | + | chr4.3:72327093-72327112 | MS.gene48899:CDS | 50.0% | |
| TTGTTGTGTAGGTTGCGGGA+AGG | + | chr4.3:72324585-72324604 | MS.gene48899:intron | 50.0% | |
| TTTGACAGGTTCCTGCAGGA+GGG | + | chr4.3:72326847-72326866 | MS.gene48899:intron | 50.0% | |
| ! | AAAGACGCCTCATTGGGTTG+AGG | - | chr4.3:72326567-72326586 | None:intergenic | 50.0% |
| ! | AGCTGCTGCTAGTTTAGGTC+AGG | + | chr4.3:72326007-72326026 | MS.gene48899:CDS | 50.0% |
| ! | AGGTCTCTCACTGTTCTGGA+AGG | + | chr4.3:72327757-72327776 | MS.gene48899:CDS | 50.0% |
| ! | CCGATAGCTGCTGCTAGTTT+AGG | + | chr4.3:72326002-72326021 | MS.gene48899:CDS | 50.0% |
| ! | GTCCTGATGGTGAAGTTCTG+AGG | + | chr4.3:72328361-72328380 | MS.gene48899:CDS | 50.0% |
| ! | TTGCATTTTGTCCCTCCTGC+AGG | - | chr4.3:72326861-72326880 | None:intergenic | 50.0% |
| ! | TTTTGACAGGTTCCTGCAGG+AGG | + | chr4.3:72326846-72326865 | MS.gene48899:intron | 50.0% |
| AAAGCTCGGTTGAAGCGGTC+GGG | + | chr4.3:72326035-72326054 | MS.gene48899:CDS | 55.0% | |
| AACACGCCCCCCAAGTTTAC+GGG | - | chr4.3:72329445-72329464 | None:intergenic | 55.0% | |
| AATGCGGTGTGGCGTACTTG+AGG | + | chr4.3:72326638-72326657 | MS.gene48899:intron | 55.0% | |
| ACAGGTGCTTCAGCAACCTG+AGG | + | chr4.3:72329419-72329438 | MS.gene48899:intron | 55.0% | |
| ACCTGAGGCCCGTAAACTTG+GGG | + | chr4.3:72329434-72329453 | MS.gene48899:CDS | 55.0% | |
| AGGTGAGCTTGGCTGAACCA+CGG | - | chr4.3:72325525-72325544 | None:intergenic | 55.0% | |
| CAACACGCCCCCCAAGTTTA+CGG | - | chr4.3:72329446-72329465 | None:intergenic | 55.0% | |
| CAACCTGAGGCCCGTAAACT+TGG | + | chr4.3:72329432-72329451 | MS.gene48899:CDS | 55.0% | |
| CAATACCTCGGAATGCGGTG+TGG | + | chr4.3:72326627-72326646 | MS.gene48899:intron | 55.0% | |
| CCTTACTGATCCGGACAAGG+GGG | - | chr4.3:72329190-72329209 | None:intergenic | 55.0% | |
| CTTACTGATCCGGACAAGGG+GGG | - | chr4.3:72329189-72329208 | None:intergenic | 55.0% | |
| CTTCTTCAATGCCAGGGCGT+TGG | - | chr4.3:72326082-72326101 | None:intergenic | 55.0% | |
| GAGGCAAGGGCTTAACGTCT+TGG | + | chr4.3:72327014-72327033 | MS.gene48899:CDS | 55.0% | |
| GCGGACAATACCTCGGAATG+CGG | + | chr4.3:72326622-72326641 | MS.gene48899:intron | 55.0% | |
| GCGTCCTCGTCAGGAAATGT+TGG | - | chr4.3:72325915-72325934 | None:intergenic | 55.0% | |
| GGCCTTACAACCTGTCCTGA+AGG | + | chr4.3:72328329-72328348 | MS.gene48899:CDS | 55.0% | |
| GGGCAAAGTTGTTGCGGTCA+AGG | + | chr4.3:72326055-72326074 | MS.gene48899:CDS | 55.0% | |
| GGTCGAGGCTAAGGAGTTAG+AGG | + | chr4.3:72329132-72329151 | MS.gene48899:intron | 55.0% | |
| GTGTTGGACACTGGCATGGA+TGG | + | chr4.3:72324376-72324395 | MS.gene48899:intron | 55.0% | |
| TGGGTCAAGGGCTGTCTACT+AGG | + | chr4.3:72324753-72324772 | MS.gene48899:CDS | 55.0% | |
| TTAGCCCACGTGTGTGGCTT+AGG | + | chr4.3:72329163-72329182 | MS.gene48899:intron | 55.0% | |
| ! | AAACTTGGGGGGCGTGTTGT+CGG | + | chr4.3:72329447-72329466 | MS.gene48899:CDS | 55.0% |
| !! | CATTCAAAGGCGTCCTCGTC+AGG | - | chr4.3:72325924-72325943 | None:intergenic | 55.0% |
| AACTCCTTAGCCTCGACCGC+AGG | - | chr4.3:72329130-72329149 | None:intergenic | 60.0% | |
| ACTCCTTAGCCTCGACCGCA+GGG | - | chr4.3:72329129-72329148 | None:intergenic | 60.0% | |
| CCCCCTTGTCCGGATCAGTA+AGG | + | chr4.3:72329187-72329206 | MS.gene48899:intron | 60.0% | |
| CCTGAGGCCCGTAAACTTGG+GGG | + | chr4.3:72329435-72329454 | MS.gene48899:CDS | 60.0% | |
| CGGTGTGGCGTACTTGAGGA+TGG | + | chr4.3:72326642-72326661 | MS.gene48899:intron | 60.0% | |
| CTAGCAGCAGCTATCGGCGA+TGG | - | chr4.3:72325999-72326018 | None:intergenic | 60.0% | |
| CTGAGGCCCGTAAACTTGGG+GGG | + | chr4.3:72329436-72329455 | MS.gene48899:CDS | 60.0% | |
| GAACAGTATCCCTGCGGTCG+AGG | + | chr4.3:72329117-72329136 | MS.gene48899:intron | 60.0% | |
| GCGGTCGGGCAAAGTTGTTG+CGG | + | chr4.3:72326049-72326068 | MS.gene48899:CDS | 60.0% | |
| TATCCCTGCGGTCGAGGCTA+AGG | + | chr4.3:72329123-72329142 | MS.gene48899:intron | 60.0% | |
| TTGCGGCTGTGATGCCGTTG+TGG | + | chr4.3:72325656-72325675 | MS.gene48899:intron | 60.0% | |
| ! | AGCCACACACGTGGGCTAAC+AGG | - | chr4.3:72329162-72329181 | None:intergenic | 60.0% |
| CCCCCAAGTTTACGGGCCTC+AGG | - | chr4.3:72329438-72329457 | None:intergenic | 65.0% | |
| GGCCTGTTAGCCCACGTGTG+TGG | + | chr4.3:72329157-72329176 | MS.gene48899:intron | 65.0% | |
| GGGGCCTAAGCCACACACGT+GGG | - | chr4.3:72329170-72329189 | None:intergenic | 65.0% | |
| GTACGCCACACCGCATTCCG+AGG | - | chr4.3:72326635-72326654 | None:intergenic | 65.0% | |
| TGGCTTAGGCCCCCCTTGTC+CGG | + | chr4.3:72329177-72329196 | MS.gene48899:intron | 65.0% | |
| GCGGTCAAGGTCCAACGCCC+TGG | + | chr4.3:72326068-72326087 | MS.gene48899:CDS | 70.0% | |
| GGGGGCCTAAGCCACACACG+TGG | - | chr4.3:72329171-72329190 | None:intergenic | 70.0% | |
| ! | CTTGGGGGGCGTGTTGTCGG+TGG | + | chr4.3:72329450-72329469 | MS.gene48899:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 72323606 | 72329542 | 72323606 | ID=MS.gene48899 |
| chr4.3 | mRNA | 72323606 | 72329542 | 72323606 | ID=MS.gene48899.t1;Parent=MS.gene48899 |
| chr4.3 | exon | 72323606 | 72323956 | 72323606 | ID=MS.gene48899.t1.exon1;Parent=MS.gene48899.t1 |
| chr4.3 | CDS | 72323606 | 72323956 | 72323606 | ID=cds.MS.gene48899.t1;Parent=MS.gene48899.t1 |
| chr4.3 | exon | 72324596 | 72324823 | 72324596 | ID=MS.gene48899.t1.exon2;Parent=MS.gene48899.t1 |
| chr4.3 | CDS | 72324596 | 72324823 | 72324596 | ID=cds.MS.gene48899.t1;Parent=MS.gene48899.t1 |
| chr4.3 | exon | 72325903 | 72326238 | 72325903 | ID=MS.gene48899.t1.exon3;Parent=MS.gene48899.t1 |
| chr4.3 | CDS | 72325903 | 72326238 | 72325903 | ID=cds.MS.gene48899.t1;Parent=MS.gene48899.t1 |
| chr4.3 | exon | 72326865 | 72327420 | 72326865 | ID=MS.gene48899.t1.exon4;Parent=MS.gene48899.t1 |
| chr4.3 | CDS | 72326865 | 72327420 | 72326865 | ID=cds.MS.gene48899.t1;Parent=MS.gene48899.t1 |
| chr4.3 | exon | 72327731 | 72327917 | 72327731 | ID=MS.gene48899.t1.exon5;Parent=MS.gene48899.t1 |
| chr4.3 | CDS | 72327731 | 72327917 | 72327731 | ID=cds.MS.gene48899.t1;Parent=MS.gene48899.t1 |
| chr4.3 | exon | 72328266 | 72328632 | 72328266 | ID=MS.gene48899.t1.exon6;Parent=MS.gene48899.t1 |
| chr4.3 | CDS | 72328266 | 72328632 | 72328266 | ID=cds.MS.gene48899.t1;Parent=MS.gene48899.t1 |
| chr4.3 | exon | 72329423 | 72329542 | 72329423 | ID=MS.gene48899.t1.exon7;Parent=MS.gene48899.t1 |
| chr4.3 | CDS | 72329423 | 72329542 | 72329423 | ID=cds.MS.gene48899.t1;Parent=MS.gene48899.t1 |
| Gene Sequence |
| Protein sequence |
