Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73462.t1 | XP_003592575.1 | 96.9 | 32 | 1 | 0 | 1 | 32 | 1 | 32 | 7.50E-06 | 61.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73462.t1 | G7IAV5 | 96.9 | 32 | 1 | 0 | 1 | 32 | 1 | 32 | 5.4e-06 | 61.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene73462 | 0.83174 | 1.41E-55 | -1.69E-46 |
| MS.gene049159 | MS.gene73462 | 0.810404 | 1.17E-50 | -1.69E-46 |
| MS.gene049208 | MS.gene73462 | 0.801943 | 7.09E-49 | -1.69E-46 |
| MS.gene049368 | MS.gene73462 | 0.866503 | 2.72E-65 | -1.69E-46 |
| MS.gene049786 | MS.gene73462 | 0.807034 | 6.16E-50 | -1.69E-46 |
| MS.gene049983 | MS.gene73462 | 0.839835 | 1.25E-57 | -1.69E-46 |
| MS.gene050384 | MS.gene73462 | 0.820065 | 8.35E-53 | -1.69E-46 |
| MS.gene050386 | MS.gene73462 | 0.817314 | 3.52E-52 | -1.69E-46 |
| MS.gene050646 | MS.gene73462 | 0.8342 | 3.44E-56 | -1.69E-46 |
| MS.gene050654 | MS.gene73462 | 0.858816 | 6.35E-63 | -1.69E-46 |
| MS.gene050689 | MS.gene73462 | 0.842317 | 2.78E-58 | -1.69E-46 |
| MS.gene050838 | MS.gene73462 | 0.812561 | 3.99E-51 | -1.69E-46 |
| MS.gene050941 | MS.gene73462 | 0.837212 | 5.94E-57 | -1.69E-46 |
| MS.gene051003 | MS.gene73462 | 0.848719 | 5.12E-60 | -1.69E-46 |
| MS.gene051234 | MS.gene73462 | 0.816472 | 5.43E-52 | -1.69E-46 |
| MS.gene051343 | MS.gene73462 | 0.822204 | 2.68E-53 | -1.69E-46 |
| MS.gene051363 | MS.gene73462 | 0.803768 | 2.98E-49 | -1.69E-46 |
| MS.gene051365 | MS.gene73462 | 0.833227 | 6.02E-56 | -1.69E-46 |
| MS.gene051676 | MS.gene73462 | 0.829473 | 5.05E-55 | -1.69E-46 |
| MS.gene051856 | MS.gene73462 | 0.818941 | 1.51E-52 | -1.69E-46 |
| MS.gene051902 | MS.gene73462 | 0.815843 | 7.51E-52 | -1.69E-46 |
| MS.gene051975 | MS.gene73462 | 0.84062 | 7.79E-58 | -1.69E-46 |
| MS.gene052072 | MS.gene73462 | 0.806447 | 8.19E-50 | -1.69E-46 |
| MS.gene052307 | MS.gene73462 | 0.837331 | 5.54E-57 | -1.69E-46 |
| MS.gene052342 | MS.gene73462 | 0.831262 | 1.84E-55 | -1.69E-46 |
| MS.gene052434 | MS.gene73462 | 0.846352 | 2.29E-59 | -1.69E-46 |
| MS.gene052463 | MS.gene73462 | 0.831944 | 1.25E-55 | -1.69E-46 |
| MS.gene052518 | MS.gene73462 | 0.820219 | 7.70E-53 | -1.69E-46 |
| MS.gene052609 | MS.gene73462 | 0.819999 | 8.65E-53 | -1.69E-46 |
| MS.gene052932 | MS.gene73462 | 0.813594 | 2.36E-51 | -1.69E-46 |
| MS.gene053008 | MS.gene73462 | 0.812072 | 5.10E-51 | -1.69E-46 |
| MS.gene053058 | MS.gene73462 | 0.817842 | 2.67E-52 | -1.69E-46 |
| MS.gene053298 | MS.gene73462 | 0.800859 | 1.18E-48 | -1.69E-46 |
| MS.gene053456 | MS.gene73462 | 0.806538 | 7.84E-50 | -1.69E-46 |
| MS.gene05350 | MS.gene73462 | 0.801058 | 1.08E-48 | -1.69E-46 |
| MS.gene053564 | MS.gene73462 | 0.802758 | 4.82E-49 | -1.69E-46 |
| MS.gene053879 | MS.gene73462 | 0.817935 | 2.55E-52 | -1.69E-46 |
| MS.gene054004 | MS.gene73462 | 0.800732 | 1.26E-48 | -1.69E-46 |
| MS.gene05458 | MS.gene73462 | 0.845441 | 4.05E-59 | -1.69E-46 |
| MS.gene05469 | MS.gene73462 | 0.821034 | 5.00E-53 | -1.69E-46 |
| MS.gene05517 | MS.gene73462 | 0.838322 | 3.08E-57 | -1.69E-46 |
| MS.gene055222 | MS.gene73462 | 0.806162 | 9.41E-50 | -1.69E-46 |
| MS.gene055311 | MS.gene73462 | 0.865164 | 7.20E-65 | -1.69E-46 |
| MS.gene055313 | MS.gene73462 | 0.855093 | 7.95E-62 | -1.69E-46 |
| MS.gene055314 | MS.gene73462 | 0.839278 | 1.74E-57 | -1.69E-46 |
| MS.gene055513 | MS.gene73462 | 0.844632 | 6.70E-59 | -1.69E-46 |
| MS.gene055864 | MS.gene73462 | 0.805472 | 1.31E-49 | -1.69E-46 |
| MS.gene056045 | MS.gene73462 | 0.833013 | 6.80E-56 | -1.69E-46 |
| MS.gene056181 | MS.gene73462 | 0.865819 | 4.48E-65 | -1.69E-46 |
| MS.gene056699 | MS.gene73462 | 0.829266 | 5.67E-55 | -1.69E-46 |
| MS.gene056787 | MS.gene73462 | 0.820099 | 8.20E-53 | -1.69E-46 |
| MS.gene056831 | MS.gene73462 | 0.819692 | 1.02E-52 | -1.69E-46 |
| MS.gene056986 | MS.gene73462 | 0.809997 | 1.43E-50 | -1.69E-46 |
| MS.gene057034 | MS.gene73462 | 0.807087 | 6.00E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene73462 | 0.831245 | 1.86E-55 | -1.69E-46 |
| MS.gene057208 | MS.gene73462 | 0.813964 | 1.96E-51 | -1.69E-46 |
| MS.gene057890 | MS.gene73462 | -0.810071 | 1.38E-50 | -1.69E-46 |
| MS.gene057915 | MS.gene73462 | 0.811756 | 5.97E-51 | -1.69E-46 |
| MS.gene057999 | MS.gene73462 | 0.801301 | 9.60E-49 | -1.69E-46 |
| MS.gene058081 | MS.gene73462 | 0.819591 | 1.07E-52 | -1.69E-46 |
| MS.gene058261 | MS.gene73462 | 0.802239 | 6.17E-49 | -1.69E-46 |
| MS.gene058292 | MS.gene73462 | 0.824084 | 9.78E-54 | -1.69E-46 |
| MS.gene059146 | MS.gene73462 | 0.839642 | 1.40E-57 | -1.69E-46 |
| MS.gene059290 | MS.gene73462 | 0.801603 | 8.33E-49 | -1.69E-46 |
| MS.gene06010 | MS.gene73462 | 0.823995 | 1.03E-53 | -1.69E-46 |
| MS.gene06011 | MS.gene73462 | 0.824169 | 9.34E-54 | -1.69E-46 |
| MS.gene060259 | MS.gene73462 | 0.822055 | 2.91E-53 | -1.69E-46 |
| MS.gene060763 | MS.gene73462 | 0.801109 | 1.05E-48 | -1.69E-46 |
| MS.gene060777 | MS.gene73462 | 0.812824 | 3.49E-51 | -1.69E-46 |
| MS.gene060932 | MS.gene73462 | 0.806603 | 7.59E-50 | -1.69E-46 |
| MS.gene060933 | MS.gene73462 | 0.812301 | 4.54E-51 | -1.69E-46 |
| MS.gene060935 | MS.gene73462 | 0.844021 | 9.78E-59 | -1.69E-46 |
| MS.gene060937 | MS.gene73462 | 0.849029 | 4.20E-60 | -1.69E-46 |
| MS.gene061100 | MS.gene73462 | 0.834787 | 2.45E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73462.t1 | MTR_1g108700 | 91.536 | 319 | 27 | 0 | 1 | 319 | 1 | 319 | 5.91e-83 | 253 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73462.t1 | AT2G01100 | 48.947 | 190 | 90 | 3 | 1 | 190 | 1 | 183 | 5.71e-33 | 122 |
| MS.gene73462.t1 | AT2G01100 | 48.947 | 190 | 90 | 3 | 1 | 190 | 1 | 183 | 5.71e-33 | 122 |
| MS.gene73462.t1 | AT2G01100 | 48.947 | 190 | 90 | 3 | 1 | 190 | 1 | 183 | 5.71e-33 | 122 |
Find 54 sgRNAs with CRISPR-Local
Find 71 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACATCTGATTCTGATTATC+AGG | 0.194332 | 1.4:+83395045 | MS.gene73462:CDS |
| ACTCTGATGATGAGAGTAAA+AGG | 0.293068 | 1.4:+83394528 | MS.gene73462:CDS |
| ACGAAGTCAACAAGAGAAAA+AGG | 0.339357 | 1.4:+83394795 | MS.gene73462:CDS |
| GAAGAAAATATTGGAGAGGA+AGG | 0.390822 | 1.4:+83394373 | MS.gene73462:CDS |
| GAAGCTGGAAGCTGCTGCCA+AGG | 0.414532 | 1.4:+83394418 | MS.gene73462:CDS |
| TTTGAAGTGGGAGCAGAAGC+TGG | 0.424827 | 1.4:+83394403 | MS.gene73462:CDS |
| GTGATCTCCTATGATGCTTA+TGG | 0.428176 | 1.4:-83395006 | None:intergenic |
| CACTAGATTGCGAGTGGCGG+CGG | 0.432339 | 1.4:-83394922 | None:intergenic |
| GAAGGAGAAAGAAGAAGCAA+AGG | 0.440557 | 1.4:+83394714 | MS.gene73462:CDS |
| GGAAGCTGCTGCCAAGGCAA+AGG | 0.452183 | 1.4:+83394424 | MS.gene73462:CDS |
| CCGCTTCTTTGTCTTCCGCT+TGG | 0.469488 | 1.4:-83394633 | None:intergenic |
| TTCCGCATCAGCCTTTGCCT+TGG | 0.479719 | 1.4:-83394435 | None:intergenic |
| GTTCAAGTTTGTTATAATGA+TGG | 0.482464 | 1.4:-83395177 | None:intergenic |
| GAAGACAAAGAAGCGGTCTT+CGG | 0.488136 | 1.4:+83394640 | MS.gene73462:CDS |
| AGCATAAGAATCGGAATCAC+TGG | 0.498286 | 1.4:-83394771 | None:intergenic |
| GACGGCACCATAAGCATCAT+AGG | 0.505450 | 1.4:+83394999 | MS.gene73462:CDS |
| AGCTTCTGCTCCCACTTCAA+AGG | 0.506519 | 1.4:-83394401 | None:intergenic |
| GGGCTAGTAAAAGATCTCAT+AGG | 0.508850 | 1.4:+83394549 | MS.gene73462:CDS |
| TAACAAACTTGAACACCACT+TGG | 0.521006 | 1.4:+83395186 | MS.gene73462:CDS |
| GAGGAGGAATTAGCTAAGAC+TGG | 0.524826 | 1.4:+83395262 | MS.gene73462:CDS |
| GCAGCTCTGAGGAGGAGAGA+AGG | 0.526452 | 1.4:+83394696 | MS.gene73462:CDS |
| GACTTCGTCAGCATAAGAAT+CGG | 0.530959 | 1.4:-83394780 | None:intergenic |
| TGCCAAGGCAAAGGCTGATG+CGG | 0.532483 | 1.4:+83394433 | MS.gene73462:CDS |
| CTCTGATGATGAGAGTAAAA+GGG | 0.536453 | 1.4:+83394529 | MS.gene73462:CDS |
| AACAAGCTGCATGAACCGCT+TGG | 0.536708 | 1.4:-83394339 | None:intergenic |
| CCGATCATCAGAGAAGTCCT+TGG | 0.538645 | 1.4:+83395084 | MS.gene73462:CDS |
| GGAAGGAAGCTCCTTTGAAG+TGG | 0.539988 | 1.4:+83394390 | MS.gene73462:CDS |
| TATAATGATGGCGGCGGTGA+TGG | 0.554188 | 1.4:-83395165 | None:intergenic |
| GATCACGTGATACAGAGGTT+AGG | 0.554904 | 1.4:+83395023 | MS.gene73462:CDS |
| CCAAGGACTTCTCTGATGAT+CGG | 0.562981 | 1.4:-83395084 | None:intergenic |
| TCAGATCGGAAGAGAGGTCA+TGG | 0.565374 | 1.4:+83394884 | MS.gene73462:CDS |
| AAGCATTCTCACATTGACTC+TGG | 0.568109 | 1.4:+83394581 | MS.gene73462:CDS |
| ATGAAAGTGATGATATTCAC+AGG | 0.568814 | 1.4:+83394963 | MS.gene73462:CDS |
| GATTCTGATTATCAGGGTCG+TGG | 0.571788 | 1.4:+83395052 | MS.gene73462:CDS |
| TGTCCAGAGTGTTTATGCAC+TGG | 0.574279 | 1.4:-83395136 | None:intergenic |
| AAAAGAAGAAAATATTGGAG+AGG | 0.578009 | 1.4:+83394369 | MS.gene73462:CDS |
| CAAGTTTGTTATAATGATGG+CGG | 0.579411 | 1.4:-83395174 | None:intergenic |
| ATCTGAAAGCAGCTCTGAGG+AGG | 0.584163 | 1.4:+83394688 | MS.gene73462:CDS |
| GATGCTTATGGTGCCGTCTG+TGG | 0.584587 | 1.4:-83394994 | None:intergenic |
| GTTTGTTATAATGATGGCGG+CGG | 0.587426 | 1.4:-83395171 | None:intergenic |
| AAACCAGTGCATAAACACTC+TGG | 0.597676 | 1.4:+83395133 | MS.gene73462:CDS |
| ACATCTGATTCTGATTATCA+GGG | 0.599493 | 1.4:+83395046 | MS.gene73462:CDS |
| GAAGGAAGCTCCTTTGAAGT+GGG | 0.601553 | 1.4:+83394391 | MS.gene73462:CDS |
| GCGGTTCATGCAGCTTGTTG+AGG | 0.609325 | 1.4:+83394343 | MS.gene73462:CDS |
| AGATTTCTATAGTGACGAAG+AGG | 0.614614 | 1.4:+83394856 | MS.gene73462:CDS |
| TCTGATTATCAGGGTCGTGG+TGG | 0.626264 | 1.4:+83395055 | MS.gene73462:CDS |
| AACAAATGGAAAGCATGAGG+AGG | 0.638640 | 1.4:+83395246 | MS.gene73462:CDS |
| CAGATTCACTAGATTGCGAG+TGG | 0.650396 | 1.4:-83394928 | None:intergenic |
| ACAGGAAGAGAAGCCACAGA+CGG | 0.662940 | 1.4:+83394981 | MS.gene73462:CDS |
| ATTCACTAGATTGCGAGTGG+CGG | 0.666042 | 1.4:-83394925 | None:intergenic |
| GATTTCTCTCGTCAACCAAG+TGG | 0.668379 | 1.4:-83395201 | None:intergenic |
| TAGGAGATCACGTGATACAG+AGG | 0.677230 | 1.4:+83395018 | MS.gene73462:CDS |
| TGAATCTGAAAGCAGCTCTG+AGG | 0.683084 | 1.4:+83394685 | MS.gene73462:CDS |
| CCAAGCGGAAGACAAAGAAG+CGG | 0.705691 | 1.4:+83394633 | MS.gene73462:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAAAGAAGAAAATATTGGAG+AGG | + | chr1.4:83394369-83394388 | MS.gene73462:CDS | 25.0% |
| ! | GCAAAACATAAAAAAAGATC+AGG | + | chr1.4:83394482-83394501 | MS.gene73462:CDS | 25.0% |
| ! | GGAGAAAAAGAAGAAAATAT+TGG | + | chr1.4:83394364-83394383 | MS.gene73462:CDS | 25.0% |
| !! | TCTGAATCACTAAATTTTGA+TGG | - | chr1.4:83394839-83394858 | None:intergenic | 25.0% |
| !!! | GTTCAAGTTTGTTATAATGA+TGG | - | chr1.4:83395180-83395199 | None:intergenic | 25.0% |
| ACATCTGATTCTGATTATCA+GGG | + | chr1.4:83395046-83395065 | MS.gene73462:CDS | 30.0% | |
| ATGAAAGTGATGATATTCAC+AGG | + | chr1.4:83394963-83394982 | MS.gene73462:CDS | 30.0% | |
| ! | AAAAACAAATGGAAAGCATG+AGG | + | chr1.4:83395243-83395262 | MS.gene73462:CDS | 30.0% |
| ! | TTCTTCAGAATTTTCATCCA+AGG | - | chr1.4:83395104-83395123 | None:intergenic | 30.0% |
| !! | CAAGTTTGTTATAATGATGG+CGG | - | chr1.4:83395177-83395196 | None:intergenic | 30.0% |
| !! | TCATGCTTTCCATTTGTTTT+TGG | - | chr1.4:83395244-83395263 | None:intergenic | 30.0% |
| AAGTCAACAAGAGAAAAAGG+CGG | + | chr1.4:83394798-83394817 | MS.gene73462:CDS | 35.0% | |
| ACGAAGTCAACAAGAGAAAA+AGG | + | chr1.4:83394795-83394814 | MS.gene73462:CDS | 35.0% | |
| ACTCTGGTGATCATGAAAAA+AGG | + | chr1.4:83394597-83394616 | MS.gene73462:CDS | 35.0% | |
| AGATTTCTATAGTGACGAAG+AGG | + | chr1.4:83394856-83394875 | MS.gene73462:CDS | 35.0% | |
| GAAGAAAATATTGGAGAGGA+AGG | + | chr1.4:83394373-83394392 | MS.gene73462:CDS | 35.0% | |
| GACATCTGATTCTGATTATC+AGG | + | chr1.4:83395045-83395064 | MS.gene73462:CDS | 35.0% | |
| GGAAAGAAAAAAGTTCCAAG+CGG | + | chr1.4:83394618-83394637 | MS.gene73462:CDS | 35.0% | |
| TAACAAACTTGAACACCACT+TGG | + | chr1.4:83395186-83395205 | MS.gene73462:CDS | 35.0% | |
| ! | ACGAAGAGGAATTTTCAGAT+CGG | + | chr1.4:83394870-83394889 | MS.gene73462:CDS | 35.0% |
| ! | ACTCTGATGATGAGAGTAAA+AGG | + | chr1.4:83394528-83394547 | MS.gene73462:CDS | 35.0% |
| ! | CTCTGATGATGAGAGTAAAA+GGG | + | chr1.4:83394529-83394548 | MS.gene73462:CDS | 35.0% |
| !!! | ATTTGTTTTTGGTGAGAGGT+GGG | - | chr1.4:83395233-83395252 | None:intergenic | 35.0% |
| !!! | TTCCATTTGTTTTTGGTGAG+AGG | - | chr1.4:83395237-83395256 | None:intergenic | 35.0% |
| AAACCAGTGCATAAACACTC+TGG | + | chr1.4:83395133-83395152 | MS.gene73462:CDS | 40.0% | |
| AGCATAAGAATCGGAATCAC+TGG | - | chr1.4:83394774-83394793 | None:intergenic | 40.0% | |
| CACCTCTCACCAAAAACAAA+TGG | + | chr1.4:83395232-83395251 | MS.gene73462:CDS | 40.0% | |
| GAAGGAGAAAGAAGAAGCAA+AGG | + | chr1.4:83394714-83394733 | MS.gene73462:CDS | 40.0% | |
| GACTTCGTCAGCATAAGAAT+CGG | - | chr1.4:83394783-83394802 | None:intergenic | 40.0% | |
| GTGATCTCCTATGATGCTTA+TGG | - | chr1.4:83395009-83395028 | None:intergenic | 40.0% | |
| ! | AACAAATGGAAAGCATGAGG+AGG | + | chr1.4:83395246-83395265 | MS.gene73462:CDS | 40.0% |
| ! | GAATTTTCAGATCGGAAGAG+AGG | + | chr1.4:83394878-83394897 | MS.gene73462:CDS | 40.0% |
| ! | GGGCTAGTAAAAGATCTCAT+AGG | + | chr1.4:83394549-83394568 | MS.gene73462:CDS | 40.0% |
| !! | AAGCATTCTCACATTGACTC+TGG | + | chr1.4:83394581-83394600 | MS.gene73462:CDS | 40.0% |
| !! | GTTTGTTATAATGATGGCGG+CGG | - | chr1.4:83395174-83395193 | None:intergenic | 40.0% |
| !!! | CATTTGTTTTTGGTGAGAGG+TGG | - | chr1.4:83395234-83395253 | None:intergenic | 40.0% |
| !!! | TTTGTTTTTGGTGAGAGGTG+GGG | - | chr1.4:83395232-83395251 | None:intergenic | 40.0% |
| ATTCACTAGATTGCGAGTGG+CGG | - | chr1.4:83394928-83394947 | None:intergenic | 45.0% | |
| CAGATTCACTAGATTGCGAG+TGG | - | chr1.4:83394931-83394950 | None:intergenic | 45.0% | |
| CCAAGGACTTCTCTGATGAT+CGG | - | chr1.4:83395087-83395106 | None:intergenic | 45.0% | |
| GAAGACAAAGAAGCGGTCTT+CGG | + | chr1.4:83394640-83394659 | MS.gene73462:CDS | 45.0% | |
| GAGGAGGAATTAGCTAAGAC+TGG | + | chr1.4:83395262-83395281 | MS.gene73462:CDS | 45.0% | |
| GATCACGTGATACAGAGGTT+AGG | + | chr1.4:83395023-83395042 | MS.gene73462:CDS | 45.0% | |
| GATTCTGATTATCAGGGTCG+TGG | + | chr1.4:83395052-83395071 | MS.gene73462:CDS | 45.0% | |
| GATTTCTCTCGTCAACCAAG+TGG | - | chr1.4:83395204-83395223 | None:intergenic | 45.0% | |
| TAGGAGATCACGTGATACAG+AGG | + | chr1.4:83395018-83395037 | MS.gene73462:CDS | 45.0% | |
| TGAATCTGAAAGCAGCTCTG+AGG | + | chr1.4:83394685-83394704 | MS.gene73462:CDS | 45.0% | |
| ! | TGTCCAGAGTGTTTATGCAC+TGG | - | chr1.4:83395139-83395158 | None:intergenic | 45.0% |
| !! | GAAGGAAGCTCCTTTGAAGT+GGG | + | chr1.4:83394391-83394410 | MS.gene73462:CDS | 45.0% |
| AACAAGCTGCATGAACCGCT+TGG | - | chr1.4:83394342-83394361 | None:intergenic | 50.0% | |
| ACAAGAGAAAAAGGCGGCAC+AGG | + | chr1.4:83394804-83394823 | MS.gene73462:CDS | 50.0% | |
| ACAGGAAGAGAAGCCACAGA+CGG | + | chr1.4:83394981-83395000 | MS.gene73462:CDS | 50.0% | |
| AGCTTCTGCTCCCACTTCAA+AGG | - | chr1.4:83394404-83394423 | None:intergenic | 50.0% | |
| CCAAGCGGAAGACAAAGAAG+CGG | + | chr1.4:83394633-83394652 | MS.gene73462:CDS | 50.0% | |
| CCGATCATCAGAGAAGTCCT+TGG | + | chr1.4:83395084-83395103 | MS.gene73462:CDS | 50.0% | |
| GACGGCACCATAAGCATCAT+AGG | + | chr1.4:83394999-83395018 | MS.gene73462:CDS | 50.0% | |
| TCAGATCGGAAGAGAGGTCA+TGG | + | chr1.4:83394884-83394903 | MS.gene73462:CDS | 50.0% | |
| TCTGATTATCAGGGTCGTGG+TGG | + | chr1.4:83395055-83395074 | MS.gene73462:CDS | 50.0% | |
| ! | GGAAGGAAGCTCCTTTGAAG+TGG | + | chr1.4:83394390-83394409 | MS.gene73462:CDS | 50.0% |
| ! | TTTGAAGTGGGAGCAGAAGC+TGG | + | chr1.4:83394403-83394422 | MS.gene73462:CDS | 50.0% |
| !! | ATCTGAAAGCAGCTCTGAGG+AGG | + | chr1.4:83394688-83394707 | MS.gene73462:CDS | 50.0% |
| !! | TATAATGATGGCGGCGGTGA+TGG | - | chr1.4:83395168-83395187 | None:intergenic | 50.0% |
| CCGCTTCTTTGTCTTCCGCT+TGG | - | chr1.4:83394636-83394655 | None:intergenic | 55.0% | |
| TGCCAAGGCAAAGGCTGATG+CGG | + | chr1.4:83394433-83394452 | MS.gene73462:CDS | 55.0% | |
| TTCCGCATCAGCCTTTGCCT+TGG | - | chr1.4:83394438-83394457 | None:intergenic | 55.0% | |
| !! | GATGCTTATGGTGCCGTCTG+TGG | - | chr1.4:83394997-83395016 | None:intergenic | 55.0% |
| !! | GCGGTTCATGCAGCTTGTTG+AGG | + | chr1.4:83394343-83394362 | MS.gene73462:CDS | 55.0% |
| CACTAGATTGCGAGTGGCGG+CGG | - | chr1.4:83394925-83394944 | None:intergenic | 60.0% | |
| GAAGCTGGAAGCTGCTGCCA+AGG | + | chr1.4:83394418-83394437 | MS.gene73462:CDS | 60.0% | |
| GGAAGCTGCTGCCAAGGCAA+AGG | + | chr1.4:83394424-83394443 | MS.gene73462:CDS | 60.0% | |
| !! | GCAGCTCTGAGGAGGAGAGA+AGG | + | chr1.4:83394696-83394715 | MS.gene73462:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 83394332 | 83395291 | 83394332 | ID=MS.gene73462 |
| chr1.4 | mRNA | 83394332 | 83395291 | 83394332 | ID=MS.gene73462.t1;Parent=MS.gene73462 |
| chr1.4 | exon | 83394332 | 83395291 | 83394332 | ID=MS.gene73462.t1.exon1;Parent=MS.gene73462.t1 |
| chr1.4 | CDS | 83394332 | 83395291 | 83394332 | ID=cds.MS.gene73462.t1;Parent=MS.gene73462.t1 |
| Gene Sequence |
| Protein sequence |
